Submission Results
Sequence Name: Not Available
GenBank Accession Number: 1007488932
GenInfo (GI) Number: 0000000000
Download Results: 1007488932.PHASTER.zip
gi|00000000|ref|LTBC01000012.1| Moorella mulderi DSM 14980 MOMU_contig000012, whole genome shotgun 73865, gc%: 53.96%
Download summary as .txt file: summary.txt file_download
Total: 1 prophage regions have been identified, of which 0 regions are intact, 1 regions are incomplete, and 0 regions are questionable.
| Region | Region Length | Completeness | Score | # Total Proteins | Region Position | Most Common Phage | GC % | Details |
|---|---|---|---|---|---|---|---|---|
| 1 | 20.1Kb | incomplete | 30 | 9 | 24404-44585 info_outline | PHAGE_Thermu_OH2_NC_021784(3) | 47.65% | Show info_outline |
Region DNA
>1 24404-44585 TTGCCGTGGCCGGGGCCGCGTCAGGGTTAGGCTGCACCCATACTGCCCTGGCCATCAGCG CTTTTTTAGCCAGGCAGGGCCATAATGTGGCCCTGGTGGAAGACAGCCAGGAGCCGGTAA TGAAGGATTACCTTAAAATTATCAAGGCGGACGCCGGCCGGGTAAACAAGGCAAGACGTA TAAAACGCTTTGATGTGTTTCCTTTTGCTAAAACCGAGGTTGACAAATTCATAGAAGGTG ATGGTAATAATTTTATATTTGACGAGCTTTTGCCGGAGTTGAGTGCCGGGCGGTATGAAT ATATTGTCCGCGATTTAGGTGTAGCTGACAAAAAGAGGACCAGGGAGGCTTTTAGATCCA ACCTGGCCGTCCTGGTGGCCAGTGCCGCCAGGTGGCGCTGGGGTGACTTATTAAAGATTG AGCCGTTGGCTTCATTCCGCCTGGCCTTGGTGGCCCCGGCGGAACGGGAGGTGAGGGAAA TAAGGAGAATCCCGGAGTTAAAAGTATACGTGATGCCGCACCACCCCGATCCTTTATGTA TGCCGGATGAGGAACTTGCCGAGCTTTTGCGGCCAGTATTGCCCCAGGCCAAAAAGAAAA GTTCTTTCTGGCCCTGGAAGAGACTTTGGAGTAATTGCGATTAGCGCTGTCCCAATTGTT ACCAGCGGTAAGAATATTTAATTTGCAAATGTTAAAATGCGGTGGTTGTTTTAAGTTGTA ACGGTAAACCTGGAGCAGTTAAAATTGCCCCTTCTATGGTTAATTAAACGATTATTACCA ATATCTATTATTATCCCTGGATAGAGAGAGGAAATTTTGGTTATAGGGGGTTAATTATAA TAAGGAGCTTGTAACCAATCGTGGAAGGTTTTTACCTTTTGCTGTCGAATACTAAAGGAG TGGGAAGATAATTGTGAATGACTTGCGGGTATTGAGCTTCTTTTCCGGGGCAGGAGGCCT CGACGAGGGTTTCCGCCAGATCGGATTTAGAATAGGTTTTGGTTTCGATATCGATCCTGC TGCCGTATTAACCCATAACTTTAATTATCTGTAAATGGACTATGTGGAACGACAGGGCAC AGAACACGTGTACTGAGGTGCTTAACCTTATCAGGAAACGCAAGGGGAAGACGCAACATA TAGTTATTGTAACCCTTAAGCCCATGCCCTCACGGCTGGCTTCGATTGTCCTGGGCACTG GTGATATAGATAACACTTACCATGGGGGCGCTATACGAGCTCCAAAAAGCATCCTGGAGA GTGGTAATGAAGACCAGGCAGCTTAATACCCTCGTAAGTTGCCGTCGCTTCCGCGACATT ACTGACTTGCCTTTTGATCTTGCCGTGTGATAAGCCTATTTTCATTATTGGCGAGACTCA ATACTAACTAGGAGGAGAAAAGGATAATACTATCTGCTTTGGGGGGATTACATGATAGAC TTTACTAGTTTAATAGAAGAAGGCAATAACCAATCCCCGGTCGATCCCAAAGAATTATTC CATAGCCTGGTAAGGGCGCCAGGGTGTGAGTACTTGCGTGATGTCCAGGTCGATGTCCTG GATGCATGGTATGGCAACAGGGAAAAACGAGATACTATTGTGAAGATGAATACTGGCTCA GGTAAGACCCTGGTTGGACTTTTGATGCTCCAGTCCTCCCTCAATGAGGGTATTGGACCA GCTCTCTACCTTTGCCCTACTCACCAGCTAGTTGATCAGGTGGTAAACCAGGCAAGGCAA TATGGTATAACCGTATTACGGGATGTTCCTAGGAATCCGTTACCTTTTGAGTTTCTAAAT AGTGAGGCCATTCTTGTAACTACGTTCTCCAGATTTTTTAACGGCCAATCGGTCTTTGGG GTTGAGGGTAGATCCTCTTCCCCTGTTGAAGTGGGTGCTATAGTGATCGATGACGCCCAT AGTTGCCTGGCTATTGCCAGGGAACAGGCAAGCATCACGTTTCAGAGGGAAGAAGTAGGA TATAGTCAGTTTTTGGGCCTTTTTAGGGGAGTATTAGAAGAGCAATCAGCCGGTACAGCA GCTAGCATCTTTGAAGGAGATTCAGCTGCTTTCCTTGCTGTCCCGTACTGGGCGTGGTTA AATTGCTTGAATGATGTAGCAAGTATTCTTAGCCAGTTAAGCAGGGAAGAAGAGGGAAAT GTAAAGTTCGCCTGGCCCCTTATGCAAGGTTGCCTTGAAATTTGCCATTGCCTTGTCTCA GGTCGAAAGATCTTGATCACCCCTCATGTACTACCAGTTGAACGTATCCCGGCTTTTAAA AGGGCTAAACGGAGATTCTATCTATCTGCTACCCTGATAGATGATGCCGCCCTCATCAGA GATTTTGGCTTGAGTGAGGATATCTTTAGTAATCCACTCCATCCAAAAATCAAGGGGGAC GTTGGCGAGAGGCTGATCATTGCTCCTGGTCTTATCGATAGTAGTATTTCAAAGGAGGAA ATCTACCCGTGGGTTGCCACGTTTGCTAGGAAGGGCTATAATATCGTGGTCTTATGTCCT TCTTTTAACGCAGCAAGCCGGTGGCAACAAATTGGTGCCAGGGTTGCAGGGGAAGGCAGG GACATCGGAGTACAAGAGGCGATCAAGCAGCTACATGATTCTAGAGGGAATATTATCGTC CTTGTAAACAGGTACGATGGTATTGACTTACCCGGAGATGCATGCCGTATCCTTGTTCTA GATGGGTTACCCGTTGGGGGAGACTTGTATGAGCAGTATGTCATGGCTATGCGTCCCGAT TCCCAGCAAGTGAGACTAGTCCAAGCCCAAAAGATAGAGCAAGGGCTTGGGCGTGGTGTC CGTTCGGGTAGTGATTATTGTGCTGTACTGCTGGTAGACCATGATCTGGTTTCGTTCGTG ATTACAAAGCAGAACCAGCAGCTGCTCTCGCCTGAGACACGGCGGCAGCTCGAGATAGGG CGTGATCTTGCTAGGAGAATCCGGGATAGTGGTGGGGATATCCTGAACAAGCTGGGGCAA CTTATCGAGCAGTGCTTGAAGCAAGATCCTGGCTGGAAAAAATTTCACCGCCAGCGGTTA GCAGACTTGGAAGAAGTGCAACCAAACCCATTGCCAAGGCAGCTTGCAGTGGTGGAAAGA AAAGCAATAAAGCTGTTCCAGGCTAACCAGGGATCTGAAGCAGCACAGGTTATCCAGCAG GCTCTGGATGAATTAAAACTAAATGACAACGCCGATAAGGGCTGGTACTTGCAACTTGCC GCTCACTTTTGTCACCGTACCGATCCAGCCCGGGCTCAAGAAATCCAGAGAAAAGCCCAT GAACTAAATAGAAATTTGCTGCGGCCCCTAGAAGGAATAAAATATAAGAAGATTGCAGCT TATGCAGGAGTACAGGCTAGCCGGGTGGTCCAGTGGGTCCGGCAGTATGAGGATCCTAAT ACCATGCTCGTATATGTAAGCAGCATTCTCGACAAATTAGCTTTTGGAGTAGATAGCAAT ACTTTCGAACAGGCCTTTGAAGACCTGGGGAACATCCTTGGCTTTAGGGCGCAAAGGCCA GAAAAGGAGTACGGCCGCGGCCCTGACGTCTTGTGGGTGCTTACAAAAGGGCATTACCTG GTAATTGAAGTAAAAAACCAGGTTGATCCCAATCGTGACTTCATAGCAAAGAAGGAAGCG GGACAACTTGCTAACAGCGTTAACTGGTTTAGAAGCGAATACGGTGAGGCTGAGATGACG CCAATTTTGGTACATCCTAGCAATAAAGCAGCCCCGGACGCTTTCCCACCTGCAGGGACG AAAGTTCTTACCTGTGAAGGCCTTAACAGGTTATGCGAAAAAGTTAGGTCTTTTACTGCT GCTCTGGCCACGAAAGCCCCTGGAGCCTGGATGGAAGAGGAGGTAGGAAGGATATTAGCG GCTTCCTATCTAATACCGCGTAGTTTTCTCGCCACCTTCTTTACTGATTTGAGGCTCCCT CACTAATACGAGCTGGGAAAGATATTTATTTAGAGAAATACATGGGATATATTGCTATTT GGCTTTTAGTGAGCATAGTATTAAAGATACTTGTACTTAAGCGGGCAAGTTAGAAAAGCT TCTGAAGGATATTTAGTTTTCTTTTGACTTGTTATATCTTGGTAATGTTGGCGGTTATCA CCCTTCCTAAGAATTATCCACCTCTGTTATACCACAGGGAATTGATGATCGCCAACTTCA TTAATTTTTTATAAAGTTTGGGCCAACGATTAAGTACCATTTAACAGCCTTTATTTTTTT CGTTGGCTGCCGTTAATCTCAGGCTACTTTCCCAGTATTGCCAAATAGGCCTTCAATGCA GTAAGATAGCGTTGAAGCGGTTTGCGCTTGTCCTGTTCCCAACTCTGCAAGGTCTTAGGG TTCACGCCAATAGACTGGGCCAACTCTTCTTTTGTTAAACCATGGAACACCCGGGCTTTT CTAATCCGTTGGCCCAAGGTTTTTTCAGGTAAATTCTCGAAGCAACCTATATAATATAAC GGTACATTAAGAACCTGGGCCAAAACCCGGAGGTGGGGAAGCAAAGCACGAGTCCTATTT GCTTCCAAGTTGCCAATGGTTTTTACACTTAGGCCGGTCGCTACAGCAAGGTCATGGATG GTCATGTTTTTAGCCAGCCTAGCTCGTCTGAGCCTGGCACCCGGGGTATCCCCCGACAAC ATATTTCCACGAAATAATGTTGGTAAGGATATCCGATGTTCTACTAACATAACAACGGTA TTCTCTGCACGGTTGCGCGTTAAGGTGGAGTCCAAAGATGAATAGGAATGGGTTCACTAA AAACATATCCGCCAAATTAATTCCCATTTATGACCCTCCTTCATTTTACTGCGGTGGCCC GCACACTTTACAAGGCGTATATCCCTTGCTCTTTGCTTCCTCCAGGATAATCGGTATTTT GCTCTTTGCCAGGGAATTGCACCTATCAAGGTGGTACTTCTTACCAGTCTTTGTTATATA AACAGTAATATCAGAGCTTTTCGCAGGACTTGGGGTTGGGACTACTGGCGCTACAGTAGT CCCGGCGCCAGAAGAAGTAGAAGAATTTTTAACCGTAGACGTAGGCGGGGCCGCCGCAAC GTTGGACGTCCTTACGGCTAACGTTGCGGCGATCCTATATTTATACACTTCTTTTATATG ATCTCGTATTGTTGGATTGTTGTTACAGTATATAGATAATGTGAAGTAAGGTTGTTATTA TCCCATAAACTAATATTCCAAGTCCATTATTTCTGCTTCTTTGTCCTCTTGTTTTGCCTC GTTCTCATAATCCTCGGCTATCTTTGTTAATATAGTAGCTGTTCTTGGATAGCGAATAGC CCATTTACTTGCATACAGCCGGAATCGTCCAGCTAACTCTCTTTCTTGCTGTCCACCTTC ATAGAGGGATTTTGTAACCGTTCCTCTTTTGTTATAAATTGCTATACTAAATCCTTTGTC CAGATCCTTACTCTGGATATCATCAAGTATTTTACAGACTGGTTCGGGGGGCCAAATATT ATCTTTTTCAGCTTTTGCATATGCTAAAACTTGGCCAATGTGATAGTCACCAACCTCTCT CCGATCTGACTTTATACATAATTCTCTTGCCTTTACCACCCATGCTTTCAATTTTTCATA ATCTATTTGCCCATCACTATTACTCCCGGGAGGAGTTTTCCAACTATGAAGCAATTCATA AGCAAAGTTTGCACGGTGCCTTAATAAGTCTTCAGGAATGGATTCCTTCTCTTCTTCCTG ATCTTTGTTCTTAGGTGTATAAATGTACTTAAGAACTTCAACAAAAAACTCGGGGTTAGT TGTTAATTCCCTATGTAACATTTTAGGTGGTCGCGTACTTGTCACCCCTGCGAGAATAGG TAAATACAACCACTCTAGCTGAACTATTACTTCTTTCTTTATCTCAGTAGATTTATCTAG TTCATTAAACAATTTCTCAATATGATAAGACCTCAGCCCTTGAGAGTCATCTGAACTCGC TTCCGTAGCTGCCTTTCGTAGCACCTGTGCAATTAATATGGCTGGGATCTCTTTTGCAAA TAAAGCAGAATATTCAATAGCTGTGAAATTTCTCTTGACGCGAATTAAATGGTTAATGGC ATAAATTTTATCTTCTGTTGGCAAACCGGAAATCCATAATGTACAGTGTCTCCAGTAAGC TTCTTGGATTGCTTCATTGAACGTTTCTAATAAATCCCATACAACTCGATATTGGGGAAA TGCCAGAAAGAGATTAACGATTTTATTTGGCTGCCATTCTTGCGAACGTGCTTTTTCAAC AAGGCTATTTATCCAATTAATTCCTTCTTTGAGGGCTCGTTCATGTATATAACCCTGAAC AAAATGGACTTTCTTATCATCTTCCCCTTCAAGCAAAGAAAGTAATATCTCCTCTTCCTC AATTTTTAATCCTACTTCAGATAAGCTAGTACCTACTAGCAAGGGGTTGTTGGTTTGTTC TGCAAGTTTGATTAATCCTTGAAGTCCGCCCATGCTCTTAATTACTTTTACAGCTTCTAA TCTACGTTGTGCAATAATGAGTTCTAATTTTTTGTAATCGTCTCTTTCATTGCCTTCAGG GAGCTCAGGCCAATGTTCAAAGAGCCAGCAATAGCGTTCTATGGGATTTTGAGGTTCAAC AAGAGAGTAAGCTTTTTCTATTTCTTTTAATTCTTTCTCTGGAAGGGCCCAATCAGCATC AGGGAAAGAGCGGTGTCGTGACAAAATGCTTCTAATCCGATTCCATACTTCAAGGCGGCC TTTAGATATTTCCTTTGCGGTAGACAAGAGTTTTGCTATAACATTGCTTCTGTCTTCAGG AGGTAGAGCGGAAAAATTATCTAGAACTTCCGCCCACCGATGACCATTACTGCCAACATG TATAAGCAGCCGGCTTGTTATTGCTTTTATACCTTCCAAAAGTTCGGTTATAGTTTTGAC ATCTGTTTTCTCGGAAAATTGTCTCCAGCGTGTTTTATGGGTAGGGGTACAAGTATCATG ATAACGCGGCATTAAACCGACTAATAATTTCCACCCAATTTCAGGTTCCCGCTCTATTAA AGTGTCTATCGCTGCCAAACGTTGTTCTAGAGTAGCATATGTTTGAGGGAACCATAAAAG AAAAATATCACGTAGACTATTGATTGGCCTATTGGATAGCTTTCCTCCTGGATCGAGTTT CGCCAGCTTTCCTAAAATAAGAGTTACACGTCCAAGCAGCTGGGGATTCCAGGCTAAACC TTCTAATGCCCACAGTAGACTAGGATGAGCGCTTGATGAGCTTATTGGGTCTCCTGTTTC AGAAAACATACCCATAATAGGCGTATCATCTTGAGAAATTGACATTTCCACCGCCTCTAG AAACGAGTAAGGAGACGCTTCAGCAATAAGCGGAAGCACGTCGGAGAGAGAATACCAGAG TTTCCAGTCTGCATCATGAAGTAATTCTCTTACTATATGATCAACATACGTCTGAGCCGA TGTCGATATAGGTATTCCTGTATCATCGCCTAAGACAGCTATGAGAACAAGGGTTTGGGC AATTCCTTCCCGTAAAGTTTCTGAATAAGGCATCTCCTTTCCGTAAATAGAAGCTAACCA ACGTTTTTGGGGTTCCAGTTCAAGAGCAGGGTTTATAATACCAAGAACTTTTAGAGCAAC CTTCTTAAATGTTTGAATGTCTGCTTCAGTTATAAACGGAGCAAGTGCAAACCAGGCGTC TATGGGTGATACCAGACGCCACCACTCGCCAATTTTCAGTACTGGGGAATCTGATTTATG CATCCATGTTAATAGTTTTTCAGAGAATGCTTCATAAGGTTTCCCTGCAAATTGACTGAT GATTTTTTTGTCTTCTGCCTTTTTTTCCGACCAGCGCCCTGCCAATAAGCAAGGAATGAT ATCTCTTGCGGAGTCTGCTTGAGCCCATTCCGGCTGATTCGCTATCTTTGTTAATCGTCT GCGAAGTACAGTAAGACTTCGGCCTGTTTCTTTGGAAAATCTTTGAGCATCCGATTCTGA TAGACCCATCTTTTTTAGTGCATCAATAAATGACTCACGTTTAAGCCGAGGAAGTTCAAT TTTTTCAGTGGTTACTTTATTATCAGGGCCTAATGGAATATAGACATGATGTCCCCTTTG TGTTGCCTGAGGAGTCCCTTCAATTTCTGCAAATCGTGGAATAAGTAATAGCCCTCTTCT TCCAGTAACAGTTATATGCCTAAAAGAATCCGAGCTTTCTAGAACAATAGCTTTGGACAA GATAAATTCTCGTTCAATTTCTGGCAAGGTATTTATTACCGATGCTAAAAACACTAGAGC CTCGTCACTAGTTGCTGCTTGTACTGCGAGTGGTGATGGGGAAGAATTCAGCCACTTTCG AACTGATTCAGCTTGTTTATCTCTACCTGCTAAAACAACTTCTGACGTAAGAGGAGGGTT AGTGACTGAACTCCATTCGATCCAAAAATCTTCTAGGGCTATGGCACCTTCCGGATATAT TCTTAAATATTTGGCCAGCCATGCACCCACAGCAGGTGCCTGCTCAAGCCATTCTTCTAA CACTTCTGCATCATAAACTTTTACATCTTTCCAAAATCCTTCTTTTATTTTTTCCTTACA CCATTCGTCTTTTCTTGTCCAAATTCTAGGAGTGATAAATATAAACGTTGTTTCTTTAGG ATTAACTCCCAAAGGGTTTCCTTTTCGTTTTTGGTATTCCTTTTCTGCTTTCTTTTTGAT ATTTTGATCAGTCCCTATTTCCCATACGGAAAAACCCTCAGGAAGGTATTCATTACCAAT AGTTGTTTCAAGAATTCCGTCCCAGCCAGGATAAACAACGCTATCTCCAGCAGGAATTCT TATATGGCAAATGTCTTCCGCAGTTGCTCGTATAAGACGACGGATTACAAGTGGCAGATA TTCTTCGCAATCACGTGTTGAAGCCCAATTTTTAAGATCAGTAGTATTAATCCATTGCAT ACAAATTTCACTCCTTTTCGCCAAATAATAAGGTGAACCCCAATGTCAAGTAAAAAGCCT AAATTTGCTACTGGTTATAGTGATAGTTATAGTGTATGAAGGTTTCGTGGGAGATAGGGG TAGAAGTGGTGTGTTTCTTGTTATGCCTTCTTAAGTTGTGGGTTCAAGATTAATTGCCGC TAGTCCACCGTTAATAACTTTCCTTGGAGGTAAAACTCCATTGAGGCTCTCTTTTAGTGC ACTTTCGATTTGCCGGGCAACATCCTGATGCTGCAGCAAAAATTCACAGGCATTTTCATG ACCTTGACCCAGGTGATCGCCCAGCCATGAGTACCAGGCGCCGCTTTTAGTCACAATTCC TTTCTCAACAGCCATTTCCAATAGCGCTCCTTCTTTGGATATCCCCCGACCATAGAGCAA ATCTAAATCGCATCCCCGGAACGGGGGCGCAACCTTGTTTTTTACAACCCGCGTTTTCAT TTTGTGTCCTACTACTTGCGTCCCGTTTTTAAGCGTCTCCCCTCGCTGGACCTCAATCCT TATCGATGAATAAAACTTAAGCGCCCTGCCTCCGGGCGTCACGTAATCCGGTTTGCCGAA AGAGCCGCCGGTGTTTATCTTTTCCCGGAGTTGATTGATAAAAATGACTATCGTCTTGGA CTTGGAAACTATCCCGGAAAACTTCCGCATGGCCTGGGACATGAGCCTGGCCTGGAGGCC GACATTGGCATCCCCGAATTCACCTTCTAATTCTTTTTTCGGCACCAGGGCGGCAACGGA ATCTATCACGATTATATCCACGGCAGAAGATTGGATAAGAGCTGAGGCTATTTCTAGAGC CTGCTCGCCATATTCAGGCTGGCTGACCAGCAAATTCTCAATATCCACCCCGATGGTTTT AGCGTAATTGGGGTCAAAGGCATGCTCGGCGTCGATCAGGACGGCGTTGCCGCCGCCTTT TTGGATCTCGGTAATAGCGTGGAGGGCAATCGTCGTCTTGCCTGATCCTTCCTCGCCGAA AATTTCGATTATGCGGCCTTTGGGCAAGCCGCCTACGCCCAGGGCCAGGTCCAAGGTGAG TATTCCTGTGGGCATGGCTTCGACGTTCAGGCGTTCCTGCTGGCCCAGGCGCATGATGGC GCCCTTGCCATACTTTTTTTCAATCTCTACCAGGACTTTAGCAAGGGCTTGTTCACGGCC GGTTTCCATGCTTTTTGCACTCCTTCCCGGGGAATGTTTTGGTTTGATGGTAGTCTTTAA CACTTTTATATCACCAAGAACAATTGTTCATCAACAGGTATTGCATTTTATCTCCGGGAA GATACTATTTGGCACCTAATCACTTTAGAAACTTTATCTTTACCAGCTCCGGCGGCACCC CTAATTCAGCCGCAAATTCTTCTATGGTTTGTCCATACCTGGGACGTTCTTCCCCCAGTA ATAGTTCGGCGGTAAATGCATTGGCGCGGTATTCCTCCGACCCGGTGATTATGCAGGTGT TTTCCACCATAAAAAAGTAACCGAGGCCGGCGGGCGATAACTGGTCATGGCCGATTTCGT GGCCGACTATAACCCTTTGCTCTTCTCTGGGAAGGGAAGAGTTTATCCCGATAAGTTTGC GACCCATAAATTCCAAGACCATACCTTTTATCTTGCGGAAAGGGAAAGGGATGATTTTGA TGCCCAGGTAATCAGCAAGCTTTAAGGGATCCCTGGTGTTATATTTTTTCACCAGGTCAT TTACAGCTTTGATGATGTATTCTTGCATAAGCCGTCGCTCCCGGAAGCCTTGGATCGATA TTTGTCGAAATATGGCTATATCAATAAAGCTACTCCCTTTCACAGGAAGTAGCTTTTAAA TACTTGCGTTGCTCAAATTTTAAGGTCAAGAGGCAGCTGTTATTTACCTTTCTCTTTTTC TTTCTTCAGGGTTTTCCAGGCGAACTTTAGGAATTCTATTATGTCCTCTTTATCCTCTTC GTCCAGGGGTGCCCCATTAAATTGGACGTTGCTTTGTCTAAGGAATTCTTCTAATTCTAT ATTGGTGGGAGGGTCGTCACGGTTATACCATTCTTTTGTGTCTATAGGTTTGGCCTGCTT TTCTTCTTCTGGTAGGTAGCCGGCAACAGTCATTAGGTATTCAACCGTAACACCTAAGTG TGGAGCAAGTTTTTTTAACGTAGTTGGAGAGGGGATCTGTACGCCCGCTTCGATTCTGGA AAGTGTTGCAACAGAAACACCAGAGGCTCTATATAAGTCACCTAATGTTTCATATCCTGC TTTCAGCCTTAGTTCCTTTATTTTTTCGCCAATGTCTTTAGCCATTTTTTGCACCTCTTT AATATTATAAACCAATCATTACGCTAACGTAATACTTACGAGTGCGTAATTTTTTTATAA AGTTCTTGCGTCTCCGTAAGACTTATGATAAAATTGTCTTGCGAAGGCGAAACGGCAGAG GAGTGAATATATGGCTTCTATAAAACTTAACCATCAATTTTTTAGTAAGTTAACTCAAGG GCTAAAGGACAATGAGATAGCTAAAAAACTAAACATCTCTACTGTTCAATTATGGAGAGT TCGATTGCCAGATCATGATCCGAGACATAATGACCCAGGGGTGGATTTTATTGCTGGATT GTTGAAAGCATTTCCTAGTGTAAAATTTGAAGATGTATTTTTTTTAGATACACCGTTACG TTCTCGCAAGGAGGAGCTCTCTACAGGGACTGACGGATAATTTATGTTGCTGCTGGCGTT CCCATGTTTTGGCATCAAAATACATATTCGATATTGACCTTACCATTCCTTTTAGGATTA AAAAACAAAAAATCTAAGGGAGAGGATTAAATTGCCGGACCTGTCCTATATGGCCGTAGT CTGCCCATCGGGAAATGTCAAAAACCTCGGGGGCCGGCCGCTCCTTGTAGACCTTGAGAA GCTTAAAGAACTCCATGCCGCAGGGATGACCGATGTTGAAATAGCTAATGAATTGGGAGT TAAACGAAGTACAGTAGCTATGGCCAGAAAACGTATGGGACTTACTGCTAACCGTAGGGT TGGCGAACATGGTGGTACCACTCAAAGGTCTACCAATGAGGAAGAGGCCGCTATCATGGC CTGGCTCCAATATCAGCAGGCCGTAAATGCCGCCGAGATGTCGACCAGGAGGGTGCAGGT GGGCGGCGGGGATTGGCTTAAGTGGGCAGGGAGCGCCTATGAACTGGACGGTAGCCGCAA TAAATACATATGCAACCTGGAACCGACAAGCCGGCCAGCTGACCTGCCGTTAAAAATATC AGCACTGGGTAATATACCAGCCGCCACCGGGTTCAAGAAAGGCAAGGGCGGCGGCAAAAA ACCTATCCTTCCATAAAATACCGGGTTATACCCGGTTTTTTGTTTTTCAGGACATGCCGG GCGAACAAGCCGTCGCGCATATTTTCATAGGGAAAGGGGGAGTGCTTATGCAAATAGAGC GGCCTGTACCAAGGATAAGAGTTATTCCTGTGGGGAATGTTTCCGATCATAGAAGGGCCT ATGCCCGTGTGGTTGATATTATACGCCAGGCCTGCCCTGACAGGCAGGAAAATCAACAAG AAATGTTGAAGGAAATAAACATGAAACCTACTCTGGGGAAGAAGAAAGATGAAGGCCGTG ATATATGCTAGGGTAAGCACCCAGGACCAGGCTCTCGGTTTTTCCCTGGCCACCCAGAAA GAACTCTGCGAGAAGAAGGCCAGGGCTTTAGGGGCTTTAGAAGTCGAAGTCGTAGAAGAC GCCTATACAGGCACGGAATTAAACCGCCCTAGCCTGGATTATGTGAGACAGCTCGCAGCC GCCGGAAAAGTGGACCTGGTAGTTGTCTATGACCCCGACAGGCTTTCCCGCAACCTTACA GATTTGCTCATCCTTTGCCGGGAATTTGATAAGGCGGGGGTAAGGCTGGAGTTTGTTAAC TTTGACTGGCAAAAGACGCCCCAGGGCATGCTCTTCTTGCAGATGCGGGGGGCCTTTGCC GAATTCGAGCACGCGCTCATCAAGGAGCGTACCCAGAGGGGCAAGGCCAAAAAAGCAGCC AGCGGCAAGATCCGCTGCTACGCCAAGCCTTTTGGCTACGACTGGGACGCCGAGGGGGAT ACCCTGGTAATTAATCCCCAGGAAGCCGAAATCGTCAAGCAAATGTTTGAGTGGCTGACG GATCCTCTGGAACCCTTAACCCCCTGGCAGATTACCCAGAAGCTGGGCCAGGTGTACCCC CAGGGTCCCAGGGGCAAGGGTTGGGTCCACTCATCGGTGGTGCGGATGCTGAAAAATCCC GTATATACCGGCCGGTTAAGGCGCAAGGATGAGCAGCCTGATTGGAAACCGGTCCTTGTG CCGGCCATAATTGACCAGGAAACCTTTATGAGAGCCCAGGAGATGCTTGTCAGGTCCAAG CGTTTTAACCCTAAGACTACCAGGAGAAGATTCCTGTTGCAGCGGTTGCTGGTATGCGGG GAGTGCGGGCGGAGGCTTACAGTCGTCACCCATAACAATCCCCAGAAGGCGAAGTATAGC TATTATACCTGCCCCGGACGTTACCCAACCAAGTTTGACAACCAAGGCCGGGTAGGCAGG TGCGGGCTCCCACCCTGGCGGACGGAAGAAATAGATAAGACAGTATGGGATACTATAGCT TCTATAATTAAGAACCCGGAGCTTTTTTACCAGTATATTACCAGCGAGAAGCTTGAAACA GCCAGCATACCCCGGAGGCGCCTGGAGGAAGCGCGGAAGAGGCTAGAGCAAGTGCAACGG GTGATCGAGCGAATTGACCGGGCTTATTTTATCCTGGAGGCGTTGCCAGAAGAAGACTAC AAGCGTTACCGGGCGGAACAAGAAGGAGAGCTAGTAAGAATAGAAGAAGATATCAAGAGG CTCGAAGCCGTAATTAACGCCCAGGAACAGGTGCAAAAAGGCGTAGAATTCCTGCGCCAG TACGCTGAAAACCTGGCACGGTCGGTGGATGAACTAAACTTTTTTCAAAAGCAGAATATT ACCCGCGAGCTGGTGCAGAGGGTAAAAATATATGCTGACGGCAGCCTGGAAATAGAAGGG TACTTTAACCTTCCCTTTACCGGGCCGGGCAAAAATCTCCCGGATCATTGCGAAGAACTT ACAGTATTAACCCCACAGAAGAACTTAAAAGAACCCCCTTGCAGTAGTGTTTTAACTTGC ACACATCGAGAAAAAGGCCATCCAGAAGCTCTTGAAAGAGCTGTCGGCAGAAGGGTGTAG CAGGTGAACCTCAAAAGGTTATCCCCTGGCCTGGCAAGATGGCCAGTTTTTTATTTGCAG GGACCCGTGTAAAGAGCAGGTTTCCTGTGGTATAATTTTGCCAGCCTGCCATCAGGAGCC TGGCATGAGATTAATGGTTGCAGGTGTAAACTAATAAACTGGTGATGTTTAATATGACAA GGGTGCAGCTGAGGCGGGGCGAAGAGGGGCGTATTAAAGGAGGTCATCCCTGGGTTTACC GGACGGAGATTGAGACCATCTATGGCACCTTTGAACCGGGAGACATAGTTACCGTAGAGG ATCACCGTGGCAGGTTTATTGGCCGGGGGTATATCAACCCGGCCTCCATGATTACTGTCC GCCTCCTTACCTATAATCGTGATGAGAAAATCGATAAGGCCTTCTGGCGGCGGCGCCTGG CGGCTGCCTGGGATTACCGCCAGAGGGTTCTCCAGGGCACGAGAACGGACGCCTATCGCA TTGTCTTTGGCGAAGCAGATTTCCTGCCCGGGTTGATTGTCGACAAGTTTGGCCCCTACC TAGTAGTCCAGACGCTGGCTTTAGGGATTGACCGTTTTAAAGATACTCTGGTGGAAATCG TGGATGAGTTAATCCAGCCAGCGGGGATCTATGAGCGCAATGATGCTCCCGTACGGGAGC TAGAGGGCTTGGAGCTGCGGTCTGGATTCCTCAAAGGACCCTTTGACCCGCTGGTAATCA TTCGAGAAAACGGCCTTAAATTTTATGTGGACCTGGCCGGGGGACAGAAGACTGGGTACT TCCTGGACCAGCGGGAAAACCGGGCCGCCATCCAGCCGTTTGTGAAGGGGGCGCGGGTAC TGGACTGCTTTTGCCATACCGGTGGTTTTAGCCTTCACGCCGCCCATTACGGCGCCCGCG AGGTACTGGGCCTGGATATTTCGGCAGAAGCCATCGCTGTGGCGCGACGCAATGCGGTGC TCAATGGCTATGGGGACCTATGTTTTTTTGAAGTGGCCAATGTCTTTGACGCTCTGCGGG AGCTGGAGCGCCGGGAACAAAGGTTTGATGTGGTTATCCTGGACCCGCCGGCGTTCGTCA AGGCCAGGAGGGCCTTAGAGGGAGCCATCCGGGGCTACAAGGAGATAAATTTGCGGGCGA TGAAGATTTTAGCCCCTGGCGGCTTTCTTGTGACCTGCTCCTGTTCCTACCACATGCCGG AGGATCTCTTTCTGGAGGTTATACGGGATGCAGCCTCGGATGCCCATCGGCGCCTGCGCC TGCTGGCCAGGCGCGGCCAGGCACCCGACCACCCAGTGCTTTTGGGTTATGATGAGTCGC GTTACCTCAAGTGCCTGTTGCTGCAGGTATTATGATTTGCCTAAACTTCATACGGAAGCG CTCCATAAGCACTGCGGCTTCTCCCCTGGTCATGGGGGCAAGAGGCCGCAGGGTACCGTC CGGATAACCGCGGAGCAGCCCTTCTTTTACGGCCCAGAGAACCGCCCTTTGCGCTGGTGG TGAAATATCACTCTCGTCCGGAAAGGAAGGCAGTATATGAGGCAGCGGGTCTACCGCCTG CCAGGTAGGAGGGGCTTTTATTTTGCTGGAAAGCAGCCATTCTGCTGCCCGGGCCAGAAT TATAACCGCCTGCTCACGGCTCACCCCCTGGAGGGGCCGGAATGTACCGCCGGTATAACC TTCCATTAATCCTGCCCCTGTTGCCCTCGCTACAGCACTGGCATACCAGGAATCCGGAGG TATATCTACCCACTTTACCCGGGGCGTATCAGGAGTAATATCTAGCATCCTGTCCAACAG AGCTGCCATTTCCGCCCTGCTCAGAGGCGCGTCGGGATAAAACCTTCCCTCGCCATCGCC TCGGAGCAAGCCCTCACCGGCTAAAGCCATTATTGCCGGCCACGCCCAGTGTTCAGGCGG CACGTCAACGAACTCTGCCACTCCCTGCGGCACCCTTACTGGGACTTGTTCTTTGCTTGG TTCTTCACTTTCCACGCCAGACATATCCTCGCTATTTTTCTCGGGCGAATCTTGAGAACC CTTACTTCCTCTCCATGTAGTATTCTCTGCGGGCGGTTTAATGCTTTCCGGTTCTTCGCT GCTGCCACCACCGGGATCCTGTCCGGGGCCACCACTGCTTTCGCTGTCACTACCAGAGCT TTCCCTGAGCGGTTTGAAAATAATACTAGCCGTGGTCACGCTTTCACGGCCGGCGCCATC GCGGAAATGCACTATTACCTGGCGTGAGCCCGGTGGTCCGGGCAGTAGCTGCCAGCTCCG GGTTTCCCGGTAAGATTCCCACTCACCTGGTGGGCCGCCCTCGTTAGTTATCATCATGGC GTCTATACCATTAGCATCTGCGGCCCTGAGAGTGAGTTCCACTGTAAGACTGGAAGTTTC TTCAGCCTCGTTGTTGATACATACTTGCAGCACGGTTGGAGGTTGACGGTCTAAAATCAG GTAATCTCCAGCCTCGCCTTGATTACCTTTACCATCTATAGCCAGGACTGTGAAACGATA GACCCCATCTTTATCTTTTGTATCCGGTTCCCAGGACAGGGATGCACTGGAAGGTGGCCA TTCATCCCGCCACCAGCTTTTCGCCATTACTGTCTCGCCACCTGGCCCATAAACCCCCAG CATCACCCGGTCGAGCCATTTCTCTTCGGCCAGGGAAACCTGTAGCGGCACAGGCTCGTC TGTGAGCCACATTTCCCCTGGAAGGGCTAAACTTACTTGCGGAGGAGTATCGTCTTCATA ATAGGCATATGGCGCCCACGGGGTAAAGCTCAGGTCGCCTGTAATTTTATCCCCGTGACC CTGGGGGTTTAAGGCAGCATGGTACGGCCCGCTACTGCTACCCCAGTAATTTTCAAGAAC TGCCAGGTTATTCCCTGGAGAAGCCAGCAAACCTTGCTCGTTATTGTATATGTTGTTCCC AATAAACCGCAAATTTGGCTCTGTCACCTGTAGCAGGTCAAGCCCTACCGCATTGGCCGT AATGGTGTTGCCGGTTACCTCCCCTTCAACTCTACCAGCCAGGCGCAGGCCAGTGCCATT ATTTTTCCAGGACGATTCCCTTAGCGTCACTGCGCTGCTGCCGGTAACAATTACACCAGT GCTATTCCTGCTAAAAGTGCTTTTAGTAACGCTCACCCCAGAACCATTGTCTATCAATAA CCCGGTGATATCAGTTCCCGCTGTATCGCCACTGCGGCAGCTAAGATCACATGCATTAAT GCTTACATTCCTGCTATTGAGTACAGATATCCCTGTGGCGTTATATGTAAAAGTATTCCC TCTCACTGTTACTCCCTGGCTACTGCTAACCAGCAGGGCAGCTGATGAACCCTGAAGAAA ATTGTTTTCCACCTGTACTCCCTGGCTGGAGAGTAGCTGCAAGGCGATATCGCCCTTTAA TTCATTCCCCTGCAGGTTGCCCTCCAGAGCACTGTTTAACGTAAAAGCTGTTCCGTCGAC AGTGACCGTATTTTCTAGAGCTGTTACGAGCATATCCATTGCGTCACCTTTCTGGAGGTC TATGCCGGCGGTAAAACCCTGGAGCTGGTTTTGCTGGAGGATAACTCGACCTCCAACCAC CATAATACCCAGAGGTCCTGGCCCCATCATGGTATTACCCTCCACCTGTACGGTAGAGGG AGAAATAACCTTAATAGCCGGGCTCTCGAAACCATGCCTGGTTACGATCCGGTTTCTTGT CAGGATAAGGGAATTGACTCCCTGGGTGTAGACAGCAGTTCTACTAAGGCACTGGAAGGA ACTATCGCTAATGGATACCGTGCCGCTGGCATTGATATGAATAAAATCGCTACCGTTTCC GCCTGCAGTTAAGGTGCAGCCCTGGATATTAATTTCTGTCATACCTGCTTCTATCCACAG GGCCGGGCCGGCTAATGGATTGTTATCCTCACCCAGCCGGCAGTTCGCCAGGTCGAACCT GGTGACCGGGTTGTTCTGCCTAAGGCCGCTGAAATAGATGGCTCCCCTGGAACTGCGCGT GAAAGTTACGTCCCGAAAAACCCCCGAAAAATCATTAACCCCATATTCCACCCTGACACC ATGGTCCAGGCTTCCAGACCTCCCGCCCGACCATTCCAGACGTCCGTTGCGTTTAAAGTA GACTGCTTTCGCGCCATCTATCACCATGTTTTCCAACCGCAGTTCCAGGCAGGTATTTCC TGCACTGGTAACCTCTATACCATTATCATTTATACCGCTGGTCTTTAAAGTACCGTTCTG GAGGGTAAGACTGTAGACCGTCCCGGCCACGCTGATAGCATTCTTCCCGGAGGGAGCGGT AATAACAGCGCCGTTTAAATCAAGGGTTACACCCTCTACCTGCCAGTTTAGGCTTGTGAT AAAACTAGCATTTTGGGCAACAACCTGGATGAAATCGCCCGGCCTAGCTCCATCCAGGGC AGCCTGCAAGTCACTGGCGTACACCCGCTGCGTCACGTTATAAACTGGATAAGTTGCTCC AGCGACTGCTTCATAACCTTTTTGCAGCACCAAGAGAAGCATGAACCCAAAGGTAAGGGC CAGAATCAATCCAGCTTTACCCCTGAACAACCCTTTCCTTCACCCCGGTGTGGTAGCTTC CTTAAATTAGCATATTCGCGCTTTTTCCCTGTTTTTCCTCCCTACCAACATTTTCCGACA AAATATGTCAGTTTTCCCGAAAACAATGAAAATAATGTTTTCCCCTTAGCAGTCTTTTTG TGGTATAATAACCTGTAAGTGCCTGCATTAGGGGTGAAACATGCTCAAGCTGCTGCAACC GGACCTCTATGTGCGCTCCCTGCGGGATATACCCCTGGCAGCTTTAAAGGCCCGGGGTAT CCGCGGTTTGATTATTGACCTGGATAATACCGTGACCGAATGGGGACGGGCGACCCTGGA CCAGGAAATATACCGGTGGTTTACGGAATTAAAGAAGCAAGACTTAAGGGCCTGCCTTGT ATCCAACAACCGGGATGTCCGGGTACAAAAAATAGCTGCTTACCTGGGTATTCCCGGAAT TTCCAAGGCCGGTAAACCCAGGCGGCGGGCCTTTTACCAGGCCATGGCCGTCATGGATAC GGCAGTTGGCAATACTGCCGTCATTGGTGACCAGGTTTTTACCGATATCTTGGGAGGAAA CCGCCTGGGGCTGTACACAGTTCTGGTGATGCCCATTAACCGGCGCGAATTCATTGGCAC CAGGATGATGCGCCAGTTAGAAAGATTGATAACCAGGCGCCTGGTGCTCAGCGAGTTTAA TAGTAACGATAGCAGCACATAGGTTTGATGGTCTATAACCGTCCCGGCTGCTTGAACCGG ATATAAAAGCCCGTTATTTTGCATGAACTATTAATTGAACGGAAAAAGCGATATGCTTAA TTTAACTTCGCGGAGATTGTCCGGGTAATCATTGTGCGCCTTTAACCAGATCCTAAAAGA AAACGGCAGGTGGAAGGATGCTCCAGGTAAAAGCTTCAACCGGGCTGGTGGCCCTGCTGG GGTACCCGGTAGAACATTCTTTATCGCCTTTAATGCAAAATGCGGCCTTTGCCGCCACCG GGCTGGACCTGGTTTACCTGGCCTTTGCCGTTACCCCCTCCGGCCTGCCGGCTGCCCTGG CCGGACTTAAAGCCCTGGGCTTCCGGGGCGCCAATATTACAGTACCCCATAAAGAAGCAG TTATCAAATACCTGGATGCAATTGATCCCGCGGCAGCCCGCATCGGAGCCGTGAACACAA TTGTTAATAATGACGGGCGCCTGACAGGCTACAATACTGACGCCAGCGGTTTTTTGCGTT CCCTCCAGGAGGCAGGTTTTAATCCGGCCGGCAAGAAAGCAGTTATCCTCGGGGCTGGGG GGGCGGCCCGGGCGGTGGCCTT
Region Details
| Region | 1 |
| Region Length | 20.1Kb |
| Completeness(score) | incomplete(30) |
| Specific Keyword | integrase,capsid |
| Region Position | 24404-44585 |
| # tRNA | 0 |
| # Total Proteins | 9 |
| # Phage Hit Proteins | 7 |
| # Hypothetical Proteins | 2 |
| Phage + Hypothetical Protein % | 100% |
| # Bacterial Proteins | 0 |
| Attachment Site | yes |
| # Phage Species | 5 |
| Most Common Phage Name(hit genes count) | PHAGE_Thermu_OH2_NC_021784(3) PHAGE_Bacill_1_NC_009737(2) PHAGE_Mycoba_DrDrey_NC_022059(1) PHAGE_Strept_20617_NC_023503(1) PHAGE_Lister_A118_NC_003216(1) PHAGE_Lactob_phig1e_NC_004305(1) PHAGE_Bacill_phi4J1_NC_029008(1) PHAGE_Bacill_phi105_NC_004167(1) PHAGE_Bacill_BCP78_NC_018860(1) PHAGE_Mycoba_Kostya_NC_011056(1) PHAGE_Bacill_Blue_NC_031056(1) PHAGE_Strept_TP_778L_NC_022776(1) PHAGE_Mycoba_SirDuracell_NC_041987(1) PHAGE_Bacill_JBP901_NC_027352(1) PHAGE_Thermo_THSA_485A_NC_018264(1) PHAGE_Lactoc_28201_NC_031013(1) PHAGE_Strept_TP_J34_NC_020197(1) PHAGE_Lactoc_TP901_1_NC_002747(1) PHAGE_Strept_phiNJ2_NC_019418(1) PHAGE_Geobac_GBSV1_NC_008376(1) |
| First Most Common Phage # | 3 |
| First Most Common Phage % | 33.33% |
| GC % | 47.65% |
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| # tRNA: | The number of tRNA genes present in the region. |
| # Total Proteins: | The number of ORFs present in the region. |
| # Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
| # Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
| Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
| # Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
| Attachment Site: | The putative phage attachment site. |
| # Phage Species: | The number of different phages that have similar proteins to those in the region. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
| First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
| GC %: | The percentage of GC nucleotides of the region. |
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Questionable (score 70-90)
Incomplete (score < 70)
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Score: | The score of the region based on the above criteria. |
| # Total Proteins: | The number of ORFs present in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| GC %: | The percentage of GC nucleotides of the region. |
Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
- If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
- If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
- If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
- If the size of the region is greater than 30 Kb, the score will be increased by 10.
- If there are at least 40 proteins in the region, the score will be increased by 10.
- If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
gi|00000000|ref|LTBC01000012.1| Moorella mulderi DSM 14980 MOMU_contig000012, whole genome shotgun 73865, gc%: 53.96%
Download details as .txt file: detail.txt file_download
Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File
Hits against Bacterial Database or GenBank File
Region 1, total 11 CDS
| # | CDS Position | BLAST Hit | E-Value | Sequence |
|---|---|---|---|---|
| 1 | 24404..24419 | attL | 0.0 | Showinfo_outline |
| 2 | complement(33554..34612) | PHAGE_Bacill_phi4J1_NC_029008: RecA; MOMUL_24120; phage(gi971821630) | 5.69e-121 | Showinfo_outline |
| 3 | complement(34743..35171) | PHAGE_Thermu_OH2_NC_021784: predicted Zn peptidase; MOMUL_24130; phage(gi526118363) | 5.92e-14 | Showinfo_outline |
| 4 | complement(35303..35728) | PHAGE_Thermu_OH2_NC_021784: immunity repressor protein (phage-like protein); MOMUL_24140; phage(gi526118362) | 5.01e-14 | Showinfo_outline |
| 5 | 35874..36143 | PHAGE_Thermu_OH2_NC_021784: predicted transcriptional regulator; MOMUL_24150; phage(gi526118361) | 1.10e-06 | Showinfo_outline |
| 6 | 36255..36779 | hypothetical protein; MOMUL_24160 | 0.0 | Showinfo_outline |
| 7 | 36871..37074 | hypothetical protein; MOMUL_24170 | 0.0 | Showinfo_outline |
| 8 | 37052..38683 | PHAGE_Lister_A118_NC_003216: putative integrase; MOMUL_24180; phage(gi16798814) | 3.47e-32 | Showinfo_outline |
| 9 | 38848..40038 | PHAGE_Strept_20617_NC_023503: methyltransferase; MOMUL_24190; phage(gi588295144) | 1.82e-24 | Showinfo_outline |
| 10 | complement(40010..43273) | PHAGE_Bacill_Blue_NC_031056: major capsid protein; MOMUL_24200; phage(gi100219) | 1.08e-12 | Showinfo_outline |
| 11 | 44585..44600 | attR | 0.0 | Showinfo_outline |
Sequence
>24404..24419
TTGCCGTGGCCGGGGC
Sequence
>complement(33554..34612)
MoorellamulderiDSM14980METGREQALAKVLVEIEKKYGKGAIMRLGQQERLNVEAMPTGILTLDLALGVGGLPKGRIIEIFGEEGSGKTTIALHAITEIQKGGGNAVLIDAEHAFDPNYAKTIGVDIENLLVSQPEYGEQALEIASALIQSSAVDIIVIDSVAALVPKKELEGEFGDANVGLQARLMSQAMRKFSGIVSKSKTIVIFINQLREKINTGGSFGKPDYVTPGGRALKFYSSIRIEVQRGETLKNGTQVVGHKMKTRVVKNKVAPPFRGCDLDLLYGRGISKEGALLEMAVEKGIVTKSGAWYSWLGDHLGQGHENACEFLLQHQDVARQIESALKESLNGVLPPRKVINGGLAAINLEPTT
Sequence
>complement(34743..35171)
MoorellamulderiDSM14980MQEYIIKAVNDLVKKYNTRDPLKLADYLGIKIIPFPFRKIKGMVLEFMGRKLIGINSSLPREEQRVIVGHEIGHDQLSPAGLGYFFMVENTCIITGSEEYRANAFTAELLLGEERPRYGQTIEEFAAELGVPPELVKIKFLK
Sequence
>complement(35303..35728)
MoorellamulderiDSM14980MAKDIGEKIKELRLKAGYETLGDLYRASGVSVATLSRIEAGVQIPSPTTLKKLAPHLGVTVEYLMTVAGYLPEEEKQAKPIDTKEWYNRDDPPTNIELEEFLRQSNVQFNGAPLDEEDKEDIIEFLKFAWKTLKKEKEKGK
Sequence
>35874..36143
MoorellamulderiDSM14980MASIKLNHQFFSKLTQGLKDNEIAKKLNISTVQLWRVRLPDHDPRHNDPGVDFIAGLLKAFPSVKFEDVFFLDTPLRSRKEELSTGTDG
Sequence
>36255..36779
MoorellamulderiDSM14980MPDLSYMAVVCPSGNVKNLGGRPLLVDLEKLKELHAAGMTDVEIANELGVKRSTVAMARKRMGLTANRRVGEHGGTTQRSTNEEEAAIMAWLQYQQAVNAAEMSTRRVQVGGGDWLKWAGSAYELDGSRNKYICNLEPTSRPADLPLKISALGNIPAATGFKKGKGGGKKPILP
Sequence
>36871..37074
MoorellamulderiDSM14980MQIERPVPRIRVIPVGNVSDHRRAYARVVDIIRQACPDRQENQQEMLKEINMKPTLGKKKDEGRDIC
Sequence
>37052..38683
MoorellamulderiDSM14980MKAVIYARVSTQDQALGFSLATQKELCEKKARALGALEVEVVEDAYTGTELNRPSLDYVRQLAAAGKVDLVVVYDPDRLSRNLTDLLILCREFDKAGVRLEFVNFDWQKTPQGMLFLQMRGAFAEFEHALIKERTQRGKAKKAASGKIRCYAKPFGYDWDAEGDTLVINPQEAEIVKQMFEWLTDPLEPLTPWQITQKLGQVYPQGPRGKGWVHSSVVRMLKNPVYTGRLRRKDEQPDWKPVLVPAIIDQETFMRAQEMLVRSKRFNPKTTRRRFLLQRLLVCGECGRRLTVVTHNNPQKAKYSYYTCPGRYPTKFDNQGRVGRCGLPPWRTEEIDKTVWDTIASIIKNPELFYQYITSEKLETASIPRRRLEEARKRLEQVQRVIERIDRAYFILEALPEEDYKRYRAEQEGELVRIEEDIKRLEAVINAQEQVQKGVEFLRQYAENLARSVDELNFFQKQNITRELVQRVKIYADGSLEIEGYFNLPFTGPGKNLPDHCEELTVLTPQKNLKEPPCSSVLTCTHREKGHPEALERAVGRRV
Sequence
>38848..40038
MoorellamulderiDSM14980MFNMTRVQLRRGEEGRIKGGHPWVYRTEIETIYGTFEPGDIVTVEDHRGRFIGRGYINPASMITVRLLTYNRDEKIDKAFWRRRLAAAWDYRQRVLQGTRTDAYRIVFGEADFLPGLIVDKFGPYLVVQTLALGIDRFKDTLVEIVDELIQPAGIYERNDAPVRELEGLELRSGFLKGPFDPLVIIRENGLKFYVDLAGGQKTGYFLDQRENRAAIQPFVKGARVLDCFCHTGGFSLHAAHYGAREVLGLDISAEAIAVARRNAVLNGYGDLCFFEVANVFDALRELERREQRFDVVILDPPAFVKARRALEGAIRGYKEINLRAMKILAPGGFLVTCSCSYHMPEDLFLEVIRDAASDAHRRLRLLARRGQAPDHPVLLGYDESRYLKCLLLQVL
Sequence
>complement(40010..43273)
MoorellamulderiDSM14980MFRGKAGLILALTFGFMLLLVLQKGYEAVAGATYPVYNVTQRVYASDLQAALDGARPGDFIQVVAQNASFITSLNWQVEGVTLDLNGAVITAPSGKNAISVAGTVYSLTLQNGTLKTSGINDNGIEVTSAGNTCLELRLENMVIDGAKAVYFKRNGRLEWSGGRSGSLDHGVRVEYGVNDFSGVFRDVTFTRSSRGAIYFSGLRQNNPVTRFDLANCRLGEDNNPLAGPALWIEAGMTEINIQGCTLTAGGNGSDFIHINASGTVSISDSSFQCLSRTAVYTQGVNSLILTRNRIVTRHGFESPAIKVISPSTVQVEGNTMMGPGPLGIMVVGGRVILQQNQLQGFTAGIDLQKGDAMDMLVTALENTVTVDGTAFTLNSALEGNLQGNELKGDIALQLLSSQGVQVENNFLQGSSAALLVSSSQGVTVRGNTFTYNATGISVLNSRNVSINACDLSCRSGDTAGTDITGLLIDNGSGVSVTKSTFSRNSTGVIVTGSSAVTLRESSWKNNGTGLRLAGRVEGEVTGNTITANAVGLDLLQVTEPNLRFIGNNIYNNEQGLLASPGNNLAVLENYWGSSSGPYHAALNPQGHGDKITGDLSFTPWAPYAYYEDDTPPQVSLALPGEMWLTDEPVPLQVSLAEEKWLDRVMLGVYGPGGETVMAKSWWRDEWPPSSASLSWEPDTKDKDGVYRFTVLAIDGKGNQGEAGDYLILDRQPPTVLQVCINNEAEETSSLTVELTLRAADANGIDAMMITNEGGPPGEWESYRETRSWQLLPGPPGSRQVIVHFRDGAGRESVTTASIIFKPLRESSGSDSESSGGPGQDPGGGSSEEPESIKPPAENTTWRGSKGSQDSPEKNSEDMSGVESEEPSKEQVPVRVPQGVAEFVDVPPEHWAWPAIMALAGEGLLRGDGEGRFYPDAPLSRAEMAALLDRMLDITPDTPRVKWVDIPPDSWYASAVARATGAGLMEGYTGGTFRPLQGVSREQAVIILARAAEWLLSSKIKAPPTWQAVDPLPHILPSFPDESDISPPAQRAVLWAVKEGLLRGYPDGTLRPLAPMTRGEAAVLMERFRMKFRQIIIPAATGT
Sequence
>44585..44600
TTGCCGTGGCCGGGGC
Click on a region to see details.
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Length: 73865 bps
Phages: 1
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Click on a region in the genome above to show details here.
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Click on a sequence to see details.
Locus 1: attL (Region 1)
Locus: attLORF Start: 24404
ORF Stop: 24419
Strand: Forward
Protein Sequence: TTGCCGTGGCCGGGGC
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attL
Homolog/Ortholog E-Value: N/A
Locus 2: MOMUL_24120 (Region 1)
Locus: MOMUL_24120ORF Start: 33554
ORF Stop: 34612
Strand: Backward
Protein Sequence: METGREQALAKVLVEIEKKYGKGAIMRLGQQERLNVEAMPTGILTLDLALGVGGLPKGRIIEIFGEEGSGKTTIALHAITEIQKGGGNAVLIDAEHAFDPNYAKTIGVDIENLLVSQPEYGEQALEIASALIQSSAVDIIVIDSVAALVPKKELEGEFGDANVGLQARLMSQAMRKFSGIVSKSKTIVIFINQLREKINTGGSFGKPDYVTPGGRALKFYSSIRIEVQRGETLKNGTQVVGHKMKTRVVKNKVAPPFRGCDLDLLYGRGISKEGALLEMAVEKGIVTKSGAWYSWLGDHLGQGHENACEFLLQHQDVARQIESALKESLNGVLPPRKVINGGLAAINLEPTT
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: MOMUL_24120, RecA, phage(gi971821630), PHAGE_Bacill_phi4J1_NC_029008
Homolog/Ortholog E-Value: 5.69e-121
Locus 3: MOMUL_24130 (Region 1)
Locus: MOMUL_24130ORF Start: 34743
ORF Stop: 35171
Strand: Backward
Protein Sequence: MQEYIIKAVNDLVKKYNTRDPLKLADYLGIKIIPFPFRKIKGMVLEFMGRKLIGINSSLPREEQRVIVGHEIGHDQLSPAGLGYFFMVENTCIITGSEEYRANAFTAELLLGEERPRYGQTIEEFAAELGVPPELVKIKFLK
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: MOMUL_24130, predicted Zn peptidase, phage(gi526118363), PHAGE_Thermu_OH2_NC_021784
Homolog/Ortholog E-Value: 5.92e-14
Locus 4: MOMUL_24140 (Region 1)
Locus: MOMUL_24140ORF Start: 35303
ORF Stop: 35728
Strand: Backward
Protein Sequence: MAKDIGEKIKELRLKAGYETLGDLYRASGVSVATLSRIEAGVQIPSPTTLKKLAPHLGVTVEYLMTVAGYLPEEEKQAKPIDTKEWYNRDDPPTNIELEEFLRQSNVQFNGAPLDEEDKEDIIEFLKFAWKTLKKEKEKGK
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: MOMUL_24140, immunity repressor protein (phage-like protein), phage(gi526118362), PHAGE_Thermu_OH2_NC_021784
Homolog/Ortholog E-Value: 5.01e-14
Locus 5: MOMUL_24150 (Region 1)
Locus: MOMUL_24150ORF Start: 35874
ORF Stop: 36143
Strand: Forward
Protein Sequence: MASIKLNHQFFSKLTQGLKDNEIAKKLNISTVQLWRVRLPDHDPRHNDPGVDFIAGLLKAFPSVKFEDVFFLDTPLRSRKEELSTGTDG
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: MOMUL_24150, predicted transcriptional regulator, phage(gi526118361), PHAGE_Thermu_OH2_NC_021784
Homolog/Ortholog E-Value: 1.10e-06
Locus 6: MOMUL_24160 (Region 1)
Locus: MOMUL_24160ORF Start: 36255
ORF Stop: 36779
Strand: Forward
Protein Sequence: MPDLSYMAVVCPSGNVKNLGGRPLLVDLEKLKELHAAGMTDVEIANELGVKRSTVAMARKRMGLTANRRVGEHGGTTQRSTNEEEAAIMAWLQYQQAVNAAEMSTRRVQVGGGDWLKWAGSAYELDGSRNKYICNLEPTSRPADLPLKISALGNIPAATGFKKGKGGGKKPILP
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: MOMUL_24160, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 7: MOMUL_24170 (Region 1)
Locus: MOMUL_24170ORF Start: 36871
ORF Stop: 37074
Strand: Forward
Protein Sequence: MQIERPVPRIRVIPVGNVSDHRRAYARVVDIIRQACPDRQENQQEMLKEINMKPTLGKKKDEGRDIC
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: MOMUL_24170, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 8: MOMUL_24180 (Region 1)
Locus: MOMUL_24180ORF Start: 37052
ORF Stop: 38683
Strand: Forward
Protein Sequence: MKAVIYARVSTQDQALGFSLATQKELCEKKARALGALEVEVVEDAYTGTELNRPSLDYVRQLAAAGKVDLVVVYDPDRLSRNLTDLLILCREFDKAGVRLEFVNFDWQKTPQGMLFLQMRGAFAEFEHALIKERTQRGKAKKAASGKIRCYAKPFGYDWDAEGDTLVINPQEAEIVKQMFEWLTDPLEPLTPWQITQKLGQVYPQGPRGKGWVHSSVVRMLKNPVYTGRLRRKDEQPDWKPVLVPAIIDQETFMRAQEMLVRSKRFNPKTTRRRFLLQRLLVCGECGRRLTVVTHNNPQKAKYSYYTCPGRYPTKFDNQGRVGRCGLPPWRTEEIDKTVWDTIASIIKNPELFYQYITSEKLETASIPRRRLEEARKRLEQVQRVIERIDRAYFILEALPEEDYKRYRAEQEGELVRIEEDIKRLEAVINAQEQVQKGVEFLRQYAENLARSVDELNFFQKQNITRELVQRVKIYADGSLEIEGYFNLPFTGPGKNLPDHCEELTVLTPQKNLKEPPCSSVLTCTHREKGHPEALERAVGRRV
Homolog/Ortholog Species: Integrase
Homolog/Ortholog Protein: MOMUL_24180, putative integrase, phage(gi16798814), PHAGE_Lister_A118_NC_003216
Homolog/Ortholog E-Value: 3.47e-32
Locus 9: MOMUL_24190 (Region 1)
Locus: MOMUL_24190ORF Start: 38848
ORF Stop: 40038
Strand: Forward
Protein Sequence: MFNMTRVQLRRGEEGRIKGGHPWVYRTEIETIYGTFEPGDIVTVEDHRGRFIGRGYINPASMITVRLLTYNRDEKIDKAFWRRRLAAAWDYRQRVLQGTRTDAYRIVFGEADFLPGLIVDKFGPYLVVQTLALGIDRFKDTLVEIVDELIQPAGIYERNDAPVRELEGLELRSGFLKGPFDPLVIIRENGLKFYVDLAGGQKTGYFLDQRENRAAIQPFVKGARVLDCFCHTGGFSLHAAHYGAREVLGLDISAEAIAVARRNAVLNGYGDLCFFEVANVFDALRELERREQRFDVVILDPPAFVKARRALEGAIRGYKEINLRAMKILAPGGFLVTCSCSYHMPEDLFLEVIRDAASDAHRRLRLLARRGQAPDHPVLLGYDESRYLKCLLLQVL
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: MOMUL_24190, methyltransferase, phage(gi588295144), PHAGE_Strept_20617_NC_023503
Homolog/Ortholog E-Value: 1.82e-24
Locus 10: MOMUL_24200 (Region 1)
Locus: MOMUL_24200ORF Start: 40010
ORF Stop: 43273
Strand: Backward
Protein Sequence: MFRGKAGLILALTFGFMLLLVLQKGYEAVAGATYPVYNVTQRVYASDLQAALDGARPGDFIQVVAQNASFITSLNWQVEGVTLDLNGAVITAPSGKNAISVAGTVYSLTLQNGTLKTSGINDNGIEVTSAGNTCLELRLENMVIDGAKAVYFKRNGRLEWSGGRSGSLDHGVRVEYGVNDFSGVFRDVTFTRSSRGAIYFSGLRQNNPVTRFDLANCRLGEDNNPLAGPALWIEAGMTEINIQGCTLTAGGNGSDFIHINASGTVSISDSSFQCLSRTAVYTQGVNSLILTRNRIVTRHGFESPAIKVISPSTVQVEGNTMMGPGPLGIMVVGGRVILQQNQLQGFTAGIDLQKGDAMDMLVTALENTVTVDGTAFTLNSALEGNLQGNELKGDIALQLLSSQGVQVENNFLQGSSAALLVSSSQGVTVRGNTFTYNATGISVLNSRNVSINACDLSCRSGDTAGTDITGLLIDNGSGVSVTKSTFSRNSTGVIVTGSSAVTLRESSWKNNGTGLRLAGRVEGEVTGNTITANAVGLDLLQVTEPNLRFIGNNIYNNEQGLLASPGNNLAVLENYWGSSSGPYHAALNPQGHGDKITGDLSFTPWAPYAYYEDDTPPQVSLALPGEMWLTDEPVPLQVSLAEEKWLDRVMLGVYGPGGETVMAKSWWRDEWPPSSASLSWEPDTKDKDGVYRFTVLAIDGKGNQGEAGDYLILDRQPPTVLQVCINNEAEETSSLTVELTLRAADANGIDAMMITNEGGPPGEWESYRETRSWQLLPGPPGSRQVIVHFRDGAGRESVTTASIIFKPLRESSGSDSESSGGPGQDPGGGSSEEPESIKPPAENTTWRGSKGSQDSPEKNSEDMSGVESEEPSKEQVPVRVPQGVAEFVDVPPEHWAWPAIMALAGEGLLRGDGEGRFYPDAPLSRAEMAALLDRMLDITPDTPRVKWVDIPPDSWYASAVARATGAGLMEGYTGGTFRPLQGVSREQAVIILARAAEWLLSSKIKAPPTWQAVDPLPHILPSFPDESDISPPAQRAVLWAVKEGLLRGYPDGTLRPLAPMTRGEAAVLMERFRMKFRQIIIPAATGT
Homolog/Ortholog Species: Head protein
Homolog/Ortholog Protein: MOMUL_24200, major capsid protein, phage(gi100219), PHAGE_Bacill_Blue_NC_031056
Homolog/Ortholog E-Value: 1.08e-12
Locus 11: attR (Region 1)
Locus: attRORF Start: 44585
ORF Stop: 44600
Strand: Forward
Protein Sequence: TTGCCGTGGCCGGGGC
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attR
Homolog/Ortholog E-Value: N/A
Lysis
Terminase
Portal Protein
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Other
Transposase
Fiber Protein
Plate Protein
tRNA
Plate Protein
tRNA
Download data as .txt file: png_input file_download