Submission Results
Sequence Name: Not Available
GenBank Accession Number: 1027763300 open_in_new
GenInfo (GI) Number: 0000000000 open_in_new
Download Results: 1027763300.PHASTER.zip
gi|00000000|ref|NZ_LXOM01000216.1| Salmonella enterica strain CU013109 PROKKA_contig000218, whole 12226, gc%: 48.74%
Download summary as .txt file: summary.txt file_download
Total: 1 prophage regions have been identified, of which 0 regions are intact, 1 regions are incomplete, and 0 regions are questionable.
| Region | Region Length | Completeness | Score | # Total Proteins | Region Position | Most Common Phage | GC % | Details |
|---|---|---|---|---|---|---|---|---|
| 1 | 12.1Kb | incomplete | 40 | 14 | 1-12126 info_outline | PHAGE_Escher_RCS47_NC_042128(3) | 48.74% | Show info_outline |
Region DNA
>1 1-12126 GGCCAGGCCTCAGCATTTTATTATGGTGATCCCCTGGGCGAAATGCGCCTGGTAAGCAGA GTTTTTGAAATGTAAGGCCTTTGAATAAGACAAAAGGCTGCCTCATCGCTAACTTTGCAA CAGTGCCAACGAGACAGTTTTCACCATTATGGCACTTTACGGCTATGCCCGCGTTTCAAC CAGCGATCAGGATCTTACTCTGCAGACACAAATTCTCCGCGCTGCTGGTTGTGAAATTAT TCGTGCAGAAAAAGCCAGCGGAAGCGGCCGGACCGGAAGGAGCGAGTTGCAGCTGCTGCT GGAGTTCCTGCGCCCTGGTGATACGTTGATGGTGACACGCGTGGATCGCCTGGCCCGCAG CATTAAGGACCTGCAGGACATTGTGTATGCCCTGAATCAACAGGGCGTAACGCTCAGGGC AACAGAACAGCCAGTGGACACGCGTTCAGCTGCAGGCAAAGCCTTCCTCGATATGCTGGG TGTTTTCGCTGAGTTTGAAACCAATCTGAGACGTGAACGCCAGATGGAAGGCATTGCCGC GGCGAAAGCCAGGGGCGTATACCGGGGAAGGAAACCGTCCATAGATCCTGCTGAGGTATA TCGTCTGTATACCATTGAGAAGATGGGAGCCACAGCCATCGCCCGCCAGCTCGGGATTGG GAGGGCGTCAGTCTACCGGGCGCTGGAAAATTATGAGCAGCCGGCGTAGCGCGATTCCGT CTGACTCCCTGTTGCAACTACGGCAACGGCTCGATCGCCTGCCGCCAAAAAGCCCTGAAC GTGCCAATCAGATTGCCGCTACCGCCCAGCTGTATGGTATTTCAGTCACGACGGTTTATC GCGCTCTTCACCTTGTTTTGAAACCGCGAACGGCCCACCGCAGTGATCATGGTCAACCCC GGATACTGCCACCGTCCGAGCTGGAGCATTACTGCGAACTGATTGCTGCACTGAAATTAC GAACCACAAATAAATCCGGCCGCCATCTGTCGACCGGACGGGCAATACAGCTGCTGGAAG AGCATGGCGTGGAGACGGTCCAGGGATTGATTAAAAGTCCCAAAGGCTTACTTCGTAAGC AGACCGTCAATCGCTGGCTTTCCCGCTGGCGTCTCGACCAGCCCCGCCTGTTACGGGAGC CTCCGGCGGTAAGATTTCAGGCTGAAAACAGCAATGACTGTTGGCAGTTTGATATGTCGC CATCCGATCTCAAACATATTGAGCGGCCTGACTGGGTAGATCCTGCCCGGGGCGAACCCA CGCTGATGCTGTTCAGCGTAGTGGATGACCGGAGCGGTGTCGCATACCAGGAATACCGGT GTGTGTACGGTGAGGATGCGGAATCTGCGCTGCGTTTTCTCTTTAACGCCATGGCCCCAA AAACCAGGTCTGATTTTCCTTTTCAGGGCCGCCCGAAATTGCTGTACCTCGATAATGGAC CGGTGGCCAAAAACCATGTATTCCAGAATGTGATGCAGTCCCTGAAGGTTGACTGGCTGA CGCATACGCCGGCAGGCAAGGACGGCACCCGGACGACGGCACGGTCCAAAGGTAAAGTTG AACGTCCTTTCCGGACCGTCAAGGAGGCACATGAAACTCTGTACCATTTCCATAAACCGG AAACGGAGCTGCAGGCCAACGAATGGCTCTGGAACTATCTGAGCCGTTATAACGCGCAGC GTCACCGCAGCGAGAAACACTCCCGACTGGAGGACTGGCTGGCAAATATCGGCCAGGAAG GTGTGAGGGATATGTGCAGCTGGGAACAATACTGTCGGTTCGCCCGGGAGCCGGAATCCC GCAAGGTGGGTGTTGATGCGCGGATAACGATAGACGGCACCGCATGGGAAGTTGAACCGG ATATGGCGGGTGAAACCGTCATTCTGCTGTGGGGGCTGTTTGACGAAGAGATGTATGTGG AGTTTACCGGTGAAACATGGGGGCCTTATTATCCGGTGTCGGGGCCTGTGCCGCTGCACC GTTACCGGACGTTCAGACGCGGTAAAGCGGCTGAACGGGCCGATCGTATCCATGCTCTGG CCAGGCAGCTGAACATCCCCATCAGCGCATTGTCCGGCAGCGATCTCCGCGTGGTCAGTG ATGACACTCAGCAGCGCATTGATGCGTTGCCACATCAGCCCTTTGATACCCGAAAATTTG AATACCACTTTCCCACCGTTATTGCGGCAAAACTGGCAATTGCCGACGATCTGGCCATAC CGCTGGCCAGAATGTCGGATGAAGACCGGGCGTTTATCGACAGTATTCTGACTGAGACGC TTAACCGTAGTGAAGTACTCGCCCGCATCAGAGACTATTTTCGTAGCAGACAATCAGGAG AGGACCATGCGGGTTGAAGTGATGGAGCATTATGGACTGACGCAGTCTATTGAACAGGCC GGGTATTATGAAACTGCCCACCATAAGCAGCTGATGAAAGACATTAAGGGTGCGATACGC GAAGGACGACTGATAGCGGTCTGTGGCGTGGTGGGAAGCGGTAAAACCGTCACTCTGCGA CGCCTGCAGCAGCAACTGCTGGATGAAAATAAAATCATTGTCGCCCGCTCCCTGTCGGTG GACAAACAGAGTGTCCGGCTCGCCACGCTGATTAATGCCCTGTTTTATGACCTGGCACAG GATAAACAGGTGCAGATCCACAAACAAGGTGAACGCCGCGAGCGTGAGCTGCAGGAACTG GTCAAAAAAGGCAAACGCCCGGTGGCGCTGTTTGTTGATGAAGCCCATGACCTGAACGGT AATACACTAACGGGGCTCAAACGGCTGATGGAAGTGGTTGAAGACGGCGGTGGTAGGCTG TCCGTCGTTCTGGCCGGTCACCCAAAACTGCGTAATGACCTGCGTCGTCCGACGATGGAG GAAATTGGCTATCGTACCGATATTTTTACACTGGACGGGATCACCGGCAGTCAGCGTGAA TATATCCAGTGGCTGCTGAAGACCAGCACCGGTAAGGGTAAGCCGGAAGATATTCTAACG ACCGAAGCCGTTGACCTGCTGGCGATGAAACTGCGAACACCGCTGCAGGTCCAGTTGCAC CTGACGCTGGCGATGGAAGCAGGATACCAGACGGGCGAAAAACCGATTACTGCCACTCTG GTTGAATCCGTGCTGTCACGTCAGCTGGATGACCTGGAGCCGACGCTCACGCGACATGGT TACCGGCTGAAGGATATGGTGGAGCAGTTCGATGCAAAACCAGCTGAAATCAGGGCATTA TTTAATAATCAGTTAGACCCTGCCCGCACGGCCGAACTACGCGACAGAATGCTGGCGGTC GGTCTGCCAATATGACGATGTTGATTTGCAGTTATTGTGAGCCCGGTGGAATGGATTGCG AGCCGGGCAGGATAAATGCGAGCCCATTATCACCTAATGTGAGCCGGTGGCGTTTTTCAT TTGCAGTTAATGTGAGCCAAAATTGGCGCTGATTGCGAGTCGGGGGGATTTCGATTGCGA GCCGCTACAAATAGCTTCGCATATTACCGCTCCACTTTAGCCAGACCCTGTTGATTGCCG GGAAACAGTGAAGCGGCATTCATAAATTGTGCTACCTGTTTCAGTAACTGCCACATGTAC CGACACTGATGATTTCTCGTTATGGTTTCGTGTAACGACAACCACAGTCGCTCTATCGGA TTCAGCCACGGCGAATACATCGGCAGGAACAGCAACCGGAACTTCGGGTTTTCTTCCAGC CAGCGTTCCACTTTGCGGCTTTTATGGATGATGTAGTTATCCGCCACCAGTGTGATGGTT TTCGCCCGCCTGTATGTACGGCGTAACGTTTCTAACAGACTGATAAATAAATCAGAACTC TTGCTGCTGCCACTGACGTAGTGAACCCGTCCCGTACCTGAATGCAGTGCGCCTGCCAGA TAATGCTTCTGGTTCTGTCCCGGCGTGGCGATGCGTTTCTGTTGCCCTTTGGGCATCCAG TCAGCGCCAATTTTTGGGTTCAGGTCGATGTCGACTTCATCCTGATAAAACACAGGATGT GCAGTCTGCTCCTGAGCCAGCGCCTGATCAATGACAAGCCGTTTTTCTTCATAGTGCGGA TCTTTGATTTTCAGCGTTGGCGCTGCCCCGCGCCAGACCATATCTGCCTGCCTCAGATAT CGGTGCAGGGTGGAGCGGTGCAGCGTCACATCAAAAAGTCGGTTGATGACGAGTGCCAGA AGCTCCGTGCTCCAGCGTGAGCGCAGCCAGCCAAAATCCTTCGGGGAACGCTGTACCAAT AGTGGCAAGAGCTGAAGGATATCAGCGACCGGCCAGCGTGGAGCACGTCCGGGTCTGAGG CTTTTTAGTCCTTCAACACCATGTAAAGTAAACCAGTTTATCCATCGACCAACGGATGAA CGGGCGGCACAGAGTAATCTGGCAACGTCAGTGACGGTCATTCCCTGATGCAGCATCAGC ATGGCGATAAGCCGTCGCGCATGGTTTTTATCGTGGGTTTGTTGGGCCTCTTTGCGCATC AGTTGTCGTTCTTCATCAGGAATTGCTGCTATGATCGGCATCGCTCAGTCCGGTTGGTGA TTTGTGATGTTTGGCGATTGATCAGATCGCACAATCCGGGCTGAGTTCTCTTTCAGTGAT CTACTATTTTGCGAAGCTATTTAGTGCACACTAATCGATTTTTCAGACAACCTTTCTCGC CTGGCGTGAGTTTTCGTTCGACTGAACCTATAAAAAGGCTCTGCATTCTGTCCTGTAGTG CGCCAGGCCTAATAACGCCTCCCGTTTAATTCCGGCCCGGTCGTACATCGGTTCTGTTCA TTTATGGGATCGCGACTTTTTCGTTGTAATGCTTCAAGAGCGATTTTTTGTTCTGCGGTC AACTCAACATTCATAGCCATCAGCATGATCCTGATTATTTTTGAAACCAAGCATCTTCAT TGATCATGGGTATACATCGTTGTTATCCAGCTATACATCATAACAGGTCAATTAAATCCA CTCAGAAATAAAGTCAGGGTATGCATAAAATCTATCGCCCATAATCCTATCCAGTAACAC CATGATTAGTAAGAACTAATCAGTCTGTGCAAAAAAAGGTCACCGCCATCCTGTTTTTGC ACATCAAAACATTTTTTCAGGATTATTCTGAAAAAAAAGGAGATATTATGGATTTCTTGA TTAATAAAAAATTAAAAATTTTCATAACACTGATGGAAACAGGTTCCTTCAGTATCGCAA CATCAGTACTGTATATCACCCGAACCCCGCTGAGCAGGGTTATTTCAGGCCTGGAAAGAG AGCTGAAACAAAGACTCTTTATACGGAAGAATGGCACTCTTATCCCAACCGAATTTGCAC AAACTATTTATCGAAAAGTAAAATCCCATTATATTTTCTTACATGCACTGGAGCAGGAAA TCGGACCTACGGGTAAAACGAAACAACTAGAAATAATATTTGACGAAATTTATCCGGAAA GTTTAAAAAATCTGATCATTTCAGCACTGACCATTTCCGGCCAAAAAACAAATATAATGG GGAGAGCCGTTAACAGCCAAATAATAGAAGAACTGTGTCAGACAAACAACTGCATTGTTA TTTCTGCCAGAAATTATTTTCATCGGGAATCGCTTGTCTGCCGGACATCAGTGGAGGGTG GGGTCATGTTATTTATTCCTAAAAAATTCTTTCTCTGCGGCAAACCTGATATCAACAGGC TGGCCGGAACACCTGTACTTTTTCATGAGGGGGCTAAAAATTTTAATCTGGACACCATAT ACCATTTTTTTGAACAGACACTAGGTATTACCAACCCTGCATTCAGTTTTGATAACGTCG ATTTGTTCAGTTCACTGTACCGGTTACAACAAGGGCTGGCGATGTTACTCATCCCCGTCA GAGTCTGTCGGGCTCTGGGATTATCAACAGATCACGCACTGCACATCAAAGGCGTAGCGC TCTGTACCTCCTTGTATTACCCGACCAAGAAACGGGAGACACCAGATTATCGTAAAGCTA TAAAACTGATACAGCAGGAACTGAAACAGTCCACCTTCTGACCTTATGCAGCGTAAGGGC CGCAACACCTGTATTCACGGCATTTGCCAGATTCAGATTGTCAGCAATCCCCATCCTCCA TAGCGGTAGTTCACCGCGGAGCATGGAGTAAACCGGCTGGTCGCCGTCAATCTGACACAG AATCAGTTTGATGCTCTGGTGGATTACCTAAAACATGGGCATTAACGCGCTGGCTCACGC CACTTTACTGAAGAAACTGAATAACGGTGACTATGACGGCGCAGCGAATGAATTCCTGAA ATGGGACCACGCCAGCGGTCAGGTTGTTCCCGGCCTGACCCGACGCCGGAGCGCTGAACG TTGTTTATTCCTGAGTTAATTTGTTGTGCCATCTTTGCACACCGGGAACCGCGATTCCGC ACAGCAGAAAAATAGCACATAAATAAACTCAATATAAGCCACTCATTTTCTGGCAATACA AAATAATTCCCCTGCAGACATTATCAGTCTTCAGGATTTCATTCTGTTTATTTTCAGGAG TCATCATTATTTATGAATATGAATCAGACCACCAGTCCGGCACTTTCACAGGTCGAAACC GCCATCCGGGCCCCGGCAGGGAATTTTGCAAAATATAATTATTATTCCGTGTTTGATATT GTCCGTCAGACCCGTAAACAGTTTATTAACGCCAATATGTCATGGCCGGGCTCCCGCGGA GGTAAAGCCTGGGACCTGGCGATGGGCCAGGCGCAGTATATCCGCTGCATGTTCCGAGAA AATCAATTGACCCGCAGAGTTCGGGGGACCTTGCAGCAGACACCGGACAATGGCACGAAC CTGAGCAGTTCCGCTGTCGGCGGTATTCAGGGACAGGCAGAGCGTCGGCCGGACCTGGCC ACCCTGATGGTGGTTAATGATGCCATTAACCAGCAAATACCGACCCTGCTGCCGTATCAT TTTCCACACGACCAGGTGGAGTTATCTCTGCTGAATACCGATGTGTCGCTGGAAGATATT ATCAGCGAGAGCAGCATTGACTGGCCGTGGTTCCTGAGCAACTCGCTGACCGGCGATAAC AGTAACTATGCCATGGAGCTCGCCAGCCGGCTGTCACCAGAGCAGCAGACACTGCCGACC GAGCCGGACAACAGTACCGCCACTGACCTGACCTCTTTTTACCAGACCAATCTGGGGCTG AAAACCGCCGACTATACGCCATTTGAAGCACTGAATACCTTTGCCCGACAGTTAGCGATT ACCGTTCCCCCAGGTGGAACAGTTGATTGCGGGTACTCTGCGTGCCAGCCGGCAGTTTAG CTTCCCGCGCTACCAGAGTAGTGAGCAGCAGACCATTCTGCAGAATCTGAGCGACGTCAT TGTTCAGGTGCATTCTACCGCGCTGTACGGCGGCAGCACTTTTGAACAGGCCGTAGAGCA GACGCTGTAAGCAGAAAATATACCTGGCCATCGTCAGACGGCCAGTTTCAGGAGATAGTG TATGTTGATACTAAATGGTTTTTCATCTGCCACTTTAGCGCTGATCACTCCCCCTTTCCT GCCAAAAGGGGGCAAGGCGCTGAGTCAGTCAGGCCCTGACGGCCTAGCCAGTATAACGCT GCCTCTGCCCATCAGCGCCGAACGCGGCTTTGCGCCTGCGCTGGCGCTGCACTACAGCAG CGGTGGCGGCAATGGCCCCTTCGGCGTGGGCTGGTCCTGCGCGACAATGAGCATTGCCCG CCGCACCAGCCATGGCGTGCCGCAGTATAACGACAGCGATGAGTTTCTGGGGCCGGACGG AGAAGTGCTGGTTCAAACGCTCAGCACCGGTGATGCCCCCAATCCCGTCACCTGCTTCGC GTACGGTGACGTATCGTTCCCGCAAAGCTACACGGTGACCCGCTATCAGCCCCGCACGGA GAGCAGTTTTTATCGCCTGGAGTACTGGGTGGGCAACAGCAACGGCGATGATTTCTGGTT ACTGCATGACAGTAACGGCATCCTGCACCTGCTGGGGAAAACCGCCGCAGCACGCCTCAG CGATCCGCAGGCCGCCTCTCATACGGCGCAATGGCTGGTTGAGGAGTCGGTGACCCCTGC CGGCGAGCATATCTATTACTCCTACTTGGCGGAGAACGGTGACAATGTGGACCTCAATGG GAACGAGGCCGGACGCGATCGCAGCGCCATGCGCTATCTCAGCAAGGTACAGTATGGCAA CGCGACCCCCGCCGCCGATCTGTACCTCTGGACTAGCGCCACACCCGCGGTACAGTGGCT GTTCACCCTAGTGTTTGACTACGGCGAACGTGGTGTAGATCCACAGGTACCGCCTGCATT CACTGCTCAGAACAGCTGGCTCGCCCGCCAGGATCCCTTCTCCCTGTATAACTACGGCTT TGAGATCCGCCTCCATCGCCTGTGCCGCCAAGTCCTGATGTTCCACCACTTTCCTGATGA ACTGGGTGAAGCCGATACGCTGGTTTCCCGTCTGCTGCTGGAGTATGACGAAAATCCGAT ACTGACACAGCTTTGCGCTGCTCGGACGCTGGCCTATGAAGGCGACGGTTATAGAAGAGC TCCTGTCAACAATATGATGCCACCGCCACCGCCACCGCCTCCTCCGATGATGGGAGGTAA TTCATCTCGACCAAAATCAAAATGGGCGATTGTAGAGGAATCAAAGCAGATTCAAGCTCT GAGGTACTATTCAGCTCAAGGGTACAGTGTGATTAATAAATATTTACGTGGGGATGATTA TCCTGAAACACAGGCAAAAGAAACTCTGCTCTCCAGAGACTATCTTTCCACAAATGAACC CAGTGATGAGGAGTTTAAAAATGCCATGTCAGTTTATATAAATGATATTGCGGAGGGATT AAGTTCACTTCCCGAAACAGATCACAGAGTCGTATACCGGGGCCTGAAGCTTGATAAGCC TGCATTATCGGATGTGCTGAAGGAATACACTACTATAGGTAATATAATAATAGATAAAGC TTTTATGAGTACATCGCCAGATAAGGCATGGATAAATGACACTATTCTCAACATATACCT AGAAAAAGGACATAAAGGTAGAATACTCGGAGATGTTGCACATTTTAAGGGAGAGGCAGA GATGCTTTTCCCTCCAAATACTAAACTCAAAATCGAAAGCATTGTAAATTGTGGATCCCA AGACTTTGCAAGCCAGCTTAGTAAGCTGAGATTAAGTGATGATGCAACTGCTGACACAAA CAGGATAAAAAGAATAATAAACATGAGGGTACTCAACTCATAGATACTAAGAATCTATTC CAGAAGTGGTATGAGCGGCCTAGCTCTATAAGGGGTTATACTCCGGAACCCCAGATTTTT CCGTCACCCTAGGCCCGCAAAGTAGTGCATCTAAACTTTTGCCATTACCCTTCTTTAACT TTCTGCTCGGAACGGACCGAAATATCATTTTTTCGCCTGATAAAAAATGAGGTTTTCTGG ATAACTAATCGTTTTATTAAAAAAAACTGAGAATTTATATCTAATAATATGGCGATATAT CCATATCGCAAAGGAGATTTCCCATGCCCATAAATAGGCCTAATCTAAATCTAAACATCC CTCCTTTGAATATTGTAGCTGCTTATGATGGGGCGGAAATACCATCTACAAATAAGCACC TGAAAAATAATTTCAACTCCTTGCACAACCAAATGCGGAAGATGCCGGTATCCCACTTTA AAGAGGCGCTGGATGTGCCTGACTATTCAGGGATGCGCCAGAGTGGTTTCTTTGCTATGA GCCAAGGTTTTCAGCTGAATAACCATGGTTACGATGTTTTCATCCATGCTCGTCGAGAAT CACCTCAGTCTCAGGGCAAATTTGCCGGTGACAAGTTCCACATCAGTGTGCTCAGGGATA TGGTGCCACAAGCATTTCAAGCGCTGTCCGGATTGCTGTTTTCAGAGGACAGTCCGGTAG ATAAGTGGAAAGTGACCGATATGGAGAAGGTCGTTCAACAAGCCCGTGTTAGCCTGGGCG CTCAGTTCACGTTGTATATAAAACCAGACCAGGAAAATTCGCAGTACAGTGCGTCGTTTC TCCACAAGACACGGCAATTTATAGAGTGTCTGGAATCCAGACTATCCGAAAATGGGGTTA TTTCAGGACAGTGTCCTGAGTCAGACGTTCATCCTGAAAATTGGAAATATCTCAGTTATC GTAATGAACTACGAAGTGGGCGTGATGGTGGTGAAATGCAGAGACAGGCTTTACGTGAGG AACCGTTTTATCGTTTGATGACAGAGTAAGTATGGGTTTGGGGAGCAACGGAACAGTAAA CGCCGTTAAACAGCTATTTTAAATGCTCATTAATTTATTAATCAATAAATTACAAATTTT CATTGAAGGCTCCCCCCTTACTGACGAATTCCGGCACCGTAAAGGAATAACGCTCATGCA TATTGATATGTCCGCACTGTAATGGTGAAAATTACATAAGCAAGAGCGTTTTTTGAAAAA TATTATATTTAATGTTTTGTAATATGCATTTTATTGAGGTAGTGTAACTATGAGAGTTTC TGGTAGTGCGTCATCCCAAGATATAATATCACGTATAAATTCAAAAAATATCAATAATAA TGATTCAAATGAAGTCAAGAGAATTAAAGATGCGCTTTGTATTGAATCAAAAGAGAGAAT TTTGTATCCACAAAATTTGAGTCGAGATAATTTAAAACAAATGGCTAGATATGTAAATAA TACATACGTCCATTACTCTGGGAACTGCGTTTTATTATCAGCGTGTTTACATTATAACAT ACATCACCGACAGGATATATTAAGTTCGAAGAACACTGCCTCTCCTACAGTGGGATTAGA CAGCGCCATTGTTGATAAAATCATTTTTGGTCATGAGCTTAACCAATCATATTGTTTAAA TTCCATCGATGAGGTGGAAAAAGAAATATTAAACCGTTATGACATTAAGAGGGAAAGTTC TTTTATCATTAGCGCAGAGAACTACATAGCTCCAATAATTGGCGAATGTAGACATGATTT CAACGCTGTGGTTATCTGTGAATATGATAAAAAACCATATGTACAATTCATTGATTCTTG GAAAACATCCAACATACTTCCTAGCTTACAAGAAATAAAAAAACACTTCTCATCATCAGG GGAATTTTATGTCAGGGCTTATGATGAAAAACACGATTGATAACTTTTTTAAATATTCAT TTTATGAATGGTAAGTTAATAGAGAGCCTTAGCAAGATCCGCTGTAAACCCTCGCCCAAT GCGGGCGGGGATATAAGGCGAAAAGCCCGAAGGGCTTTAGGGCAGGCTACTCCGGCGTAT TCTGTCTGAGCACGTATGCTTTAAGCGTTTCTATCGTGGCACCACCGGCGCTACAGGCAA AGTAAGAACGAGACCACAGCAGCCCGGTTTTGCTCTGCATCCGCAAGTGGGTATTCTGCT GACGGAGAAGCCGCGACGATACCGACTTTAAATTATTTACCATCACGCTGACCCCCAGTT TTAGCGGATACGCTATCAGCAGATGGACGTGATCTTGTTCACCATCCATCTCGATAATTT CGCACTCCAACTTTGCCGCAGCCGAACCAAAAGCATCACGTAACTGAGCGATAATCTGCC CGTCAAACAGCTTGCAGCGGTATTTTGTCGTAAAGATTAAATGCACAACCAGCTTACTTA CACTATGCCGTTTACGAAGAAAGCCTTCCAGTGATTCGTGGTGATTACTCAATTGAATTT TTCACTTAACATGTTAAAATAAATACAATATATTAATGAGCGCTGAATATGTTAAGAGCC ACGAAAGTATGCATATATCCGACACCGGAACAGGCGGAGCACCTTAACGCCCAGTTCGGT GCAGTCCGTTTTGTGTACAGCAAATCTCTGCATATCAAGAAACACGCTTATCAACGACAC GGCGTAAGTTTAACCCCGCGTAAAGACATTAAACCGCTTCTGGCTGTAGCGAAAAAATTC CGTAAATTCCGTAAATTCCGTAAATACGCATGGCTAAAGGAATATGACTCTATTGCGTTG CAACAGGCGGTGATCAATCTCGATGTTGCCTTTTCCAACGGCACTGTTGCAAATAGTCGG TGGTGA
Region Details
| Region | 1 |
| Region Length | 12.1Kb |
| Completeness(score) | incomplete(40) |
| Specific Keyword | transposase |
| Region Position | 1-12126 |
| # tRNA | 0 |
| # Total Proteins | 14 |
| # Phage Hit Proteins | 9 |
| # Hypothetical Proteins | 1 |
| Phage + Hypothetical Protein % | 71.4% |
| # Bacterial Proteins | 4 |
| Attachment Site | no |
| # Phage Species | 9 |
| Most Common Phage Name(hit genes count) | PHAGE_Escher_RCS47_NC_042128(3) PHAGE_Burkho_BcepMu_NC_005882(2) PHAGE_Burkho_phiE255_NC_009237(2) PHAGE_Salmon_SEN34_NC_028699(1) PHAGE_Burkho_KS14_NC_015273(1) PHAGE_Clostr_c_st_NC_007581(1) PHAGE_Sulfol_SMV1_NC_023585(1) PHAGE_Ralsto_RSM3_NC_011399(1) PHAGE_Pseudo_vB_PaeS_PM105_NC_028667(1) PHAGE_Pseudo_PaMx28_NC_028931(1) PHAGE_Pseudo_JBD18_NC_027986(1) PHAGE_Pseudo_B3_NC_006548(1) PHAGE_Bacill_Shbh1_NC_030925(1) PHAGE_Ralsto_Rs551_NC_047765(1) PHAGE_Edward_GF_2_NC_026611(1) PHAGE_Salmon_SEN4_NC_029015(1) PHAGE_Clostr_phiCD211_NC_029048(1) PHAGE_Phage_Gifsy_1_NC_010392(1) PHAGE_Phage_Gifsy_2_NC_010393(1) PHAGE_Ralsto_RSM1_NC_008574(1) PHAGE_Geobac_E3_NC_029073(1) PHAGE_Ralsto_NP_2014_NC_023586(1) PHAGE_Microc_Ma_LMM01_NC_008562(1) PHAGE_Salmon_SEN5_NC_028701(1) |
| First Most Common Phage # | 1 |
| First Most Common Phage % | 21.42% |
| GC % | 48.74% |
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| # tRNA: | The number of tRNA genes present in the region. |
| # Total Proteins: | The number of ORFs present in the region. |
| # Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
| # Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
| Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
| # Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
| Attachment Site: | The putative phage attachment site. |
| # Phage Species: | The number of different phages that have similar proteins to those in the region. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
| First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
| GC %: | The percentage of GC nucleotides of the region. |
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Questionable (score 70-90)
Incomplete (score < 70)
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Score: | The score of the region based on the above criteria. |
| # Total Proteins: | The number of ORFs present in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| GC %: | The percentage of GC nucleotides of the region. |
Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
- If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
- If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
- If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
- If the size of the region is greater than 30 Kb, the score will be increased by 10.
- If there are at least 40 proteins in the region, the score will be increased by 10.
- If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
gi|00000000|ref|NZ_LXOM01000216.1| Salmonella enterica strain CU013109 PROKKA_contig000218, whole 12226, gc%: 48.74%
Download details as .txt file: detail.txt file_download
Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File
Hits against Bacterial Database or GenBank File
Region 1, total 14 CDS
| # | CDS Position | BLAST Hit | E-Value | Sequence |
|---|---|---|---|---|
| 1 | 1..75 | PHAGE_Escher_RCS47_NC_042128: hypothetical protein; A7K97_RS28195; phage(gi100027) | 3.99e-10 | Showinfo_outline |
| 2 | 149..709 | PHAGE_Ralsto_Rs551_NC_047765: hypothetical protein; A7K97_RS19380; phage(gi100013) | 3.52e-42 | Showinfo_outline |
| 3 | 693..2357 | PHAGE_Pseudo_JBD18_NC_027986: hypothetical protein; A7K97_RS19385; phage(gi100013) | 1.89e-09 | Showinfo_outline |
| 4 | 2290..3315 | PHAGE_Burkho_BcepMu_NC_005882: gp08; A7K97_RS19390; phage(gi48696918) | 4.50e-05 | Showinfo_outline |
| 5 | complement(3504..4541) | PROPHAGE_Escher_EDL933: putative transposase; A7K97_RS19395; phage(gi15803522) | 6.41e-120 | Showinfo_outline |
| 6 | 5148..6041 | virulence genes transcriptional activator SpvR; A7K97_RS19400 | 0.0 | Showinfo_outline |
| 7 | 6215..6379 | PHAGE_Edward_GF_2_NC_026611: putative lysozyme; A7K97_RS19405; phage(gi764162325) | 1.58e-17 | Showinfo_outline |
| 8 | 6553..7320 | virulence protein SpvA; A7K97_RS19410 | 0.0 | Showinfo_outline |
| 9 | 7283..7450 | hypothetical protein; A7K97_RS28395 | 0.0 | Showinfo_outline |
| 10 | 7502..9283 | PHAGE_Pseudo_PaMx28_NC_028931: morphogenesis protein; A7K97_RS19415; phage(gi971757078) | 6.85e-06 | Showinfo_outline |
| 11 | 9564..10289 | type III secretion system effector phosphothreonine lyase SpvC; A7K97_RS19420 | 0.0 | Showinfo_outline |
| 12 | 10550..11200 | SPI-2 type III secretion system effector cysteine hydrolase SpvD; A7K97_RS19425 | 0.0 | Showinfo_outline |
| 13 | complement(11327..11752) | PROPHAGE_Escher_Sakai: putative transposase; A7K97_RS19430; phage(gi15834436) | 8.83e-37 | Showinfo_outline |
| 14 | 11809..12126 | PHAGE_Clostr_c_st_NC_007581: putative IS transposase (OrfB); A7K97_RS19435; phage(gi80159731) | 6.38e-10 | Showinfo_outline |
Sequence
>1..75
SalmonellaentericaGQASAFYYGDPLGEMRLVSRVFEM
Sequence
>149..709
SalmonellaentericaMALYGYARVSTSDQDLTLQTQILRAAGCEIIRAEKASGSGRTGRSELQLLLEFLRPGDTLMVTRVDRLARSIKDLQDIVYALNQQGVTLRATEQPVDTRSAAGKAFLDMLGVFAEFETNLRRERQMEGIAAAKARGVYRGRKPSIDPAEVYRLYTIEKMGATAIARQLGIGRASVYRALENYEQPA
Sequence
>693..2357
SalmonellaentericaMSSRRSAIPSDSLLQLRQRLDRLPPKSPERANQIAATAQLYGISVTTVYRALHLVLKPRTAHRSDHGQPRILPPSELEHYCELIAALKLRTTNKSGRHLSTGRAIQLLEEHGVETVQGLIKSPKGLLRKQTVNRWLSRWRLDQPRLLREPPAVRFQAENSNDCWQFDMSPSDLKHIERPDWVDPARGEPTLMLFSVVDDRSGVAYQEYRCVYGEDAESALRFLFNAMAPKTRSDFPFQGRPKLLYLDNGPVAKNHVFQNVMQSLKVDWLTHTPAGKDGTRTTARSKGKVERPFRTVKEAHETLYHFHKPETELQANEWLWNYLSRYNAQRHRSEKHSRLEDWLANIGQEGVRDMCSWEQYCRFAREPESRKVGVDARITIDGTAWEVEPDMAGETVILLWGLFDEEMYVEFTGETWGPYYPVSGPVPLHRYRTFRRGKAAERADRIHALARQLNIPISALSGSDLRVVSDDTQQRIDALPHQPFDTRKFEYHFPTVIAAKLAIADDLAIPLARMSDEDRAFIDSILTETLNRSEVLARIRDYFRSRQSGEDHAG
Sequence
>2290..3315
SalmonellaentericaMKYSPASETIFVADNQERTMRVEVMEHYGLTQSIEQAGYYETAHHKQLMKDIKGAIREGRLIAVCGVVGSGKTVTLRRLQQQLLDENKIIVARSLSVDKQSVRLATLINALFYDLAQDKQVQIHKQGERRERELQELVKKGKRPVALFVDEAHDLNGNTLTGLKRLMEVVEDGGGRLSVVLAGHPKLRNDLRRPTMEEIGYRTDIFTLDGITGSQREYIQWLLKTSTGKGKPEDILTTEAVDLLAMKLRTPLQVQLHLTLAMEAGYQTGEKPITATLVESVLSRQLDDLEPTLTRHGYRLKDMVEQFDAKPAEIRALFNNQLDPARTAELRDRMLAVGLPI
Sequence
>complement(3504..4541)
SalmonellaentericaMPIIAAIPDEERQLMRKEAQQTHDKNHARRLIAMLMLHQGMTVTDVARLLCAARSSVGRWINWFTLHGVEGLKSLRPGRAPRWPVADILQLLPLLVQRSPKDFGWLRSRWSTELLALVINRLFDVTLHRSTLHRYLRQADMVWRGAAPTLKIKDPHYEEKRLVIDQALAQEQTAHPVFYQDEVDIDLNPKIGADWMPKGQQKRIATPGQNQKHYLAGALHSGTGRVHYVSGSSKSSDLFISLLETLRRTYRRAKTITLVADNYIIHKSRKVERWLEENPKFRLLFLPMYSPWLNPIERLWLSLHETITRNHQCRYMWQLLKQVAQFMNAASLFPGNQQGLAKVER
Sequence
>5148..6041
SalmonellaentericaMDFLINKKLKIFITLMETGSFSIATSVLYITRTPLSRVISGLERELKQRLFIRKNGTLIPTEFAQTIYRKVKSHYIFLHALEQEIGPTGKTKQLEIIFDEIYPESLKNLIISALTISGQKTNIMGRAVNSQIIEELCQTNNCIVISARNYFHRESLVCRTSVEGGVMLFIPKKFFLCGKPDINRLAGTPVLFHEGAKNFNLDTIYHFFEQTLGITNPAFSFDNVDLFSSLYRLQQGLAMLLIPVRVCRALGLSTDHALHIKGVALCTSLYYPTKKRETPDYRKAIKLIQQELKQSTF
Sequence
>6215..6379
SalmonellaentericaMGINALAHATLLKKLNNGDYDGAANEFLKWDHASGQVVPGLTRRRSAERCLFLS
Sequence
>6553..7320
SalmonellaentericaMNMNQTTSPALSQVETAIRAPAGNFAKYNYYSVFDIVRQTRKQFINANMSWPGSRGGKAWDLAMGQAQYIRCMFRENQLTRRVRGTLQQTPDNGTNLSSSAVGGIQGQAERRPDLATLMVVNDAINQQIPTLLPYHFPHDQVELSLLNTDVSLEDIISESSIDWPWFLSNSLTGDNSNYAMELASRLSPEQQTLPTEPDNSTATDLTSFYQTNLGLKTADYTPFEALNTFARQLAITVPPGGTVDCGYSACQPAV
Sequence
>7283..7450
SalmonellaentericaMIAGTLRASRQFSFPRYQSSEQQTILQNLSDVIVQVHSTALYGGSTFEQAVEQTL
Sequence
>7502..9283
SalmonellaentericaMLILNGFSSATLALITPPFLPKGGKALSQSGPDGLASITLPLPISAERGFAPALALHYSSGGGNGPFGVGWSCATMSIARRTSHGVPQYNDSDEFLGPDGEVLVQTLSTGDAPNPVTCFAYGDVSFPQSYTVTRYQPRTESSFYRLEYWVGNSNGDDFWLLHDSNGILHLLGKTAAARLSDPQAASHTAQWLVEESVTPAGEHIYYSYLAENGDNVDLNGNEAGRDRSAMRYLSKVQYGNATPAADLYLWTSATPAVQWLFTLVFDYGERGVDPQVPPAFTAQNSWLARQDPFSLYNYGFEIRLHRLCRQVLMFHHFPDELGEADTLVSRLLLEYDENPILTQLCAARTLAYEGDGYRRAPVNNMMPPPPPPPPPMMGGNSSRPKSKWAIVEESKQIQALRYYSAQGYSVINKYLRGDDYPETQAKETLLSRDYLSTNEPSDEEFKNAMSVYINDIAEGLSSLPETDHRVVYRGLKLDKPALSDVLKEYTTIGNIIIDKAFMSTSPDKAWINDTILNIYLEKGHKGRILGDVAHFKGEAEMLFPPNTKLKIESIVNCGSQDFASQLSKLRLSDDATADTNRIKRIINMRVLNS
Sequence
>9564..10289
SalmonellaentericaMPINRPNLNLNIPPLNIVAAYDGAEIPSTNKHLKNNFNSLHNQMRKMPVSHFKEALDVPDYSGMRQSGFFAMSQGFQLNNHGYDVFIHARRESPQSQGKFAGDKFHISVLRDMVPQAFQALSGLLFSEDSPVDKWKVTDMEKVVQQARVSLGAQFTLYIKPDQENSQYSASFLHKTRQFIECLESRLSENGVISGQCPESDVHPENWKYLSYRNELRSGRDGGEMQRQALREEPFYRLMTE
Sequence
>10550..11200
SalmonellaentericaMRVSGSASSQDIISRINSKNINNNDSNEVKRIKDALCIESKERILYPQNLSRDNLKQMARYVNNTYVHYSGNCVLLSACLHYNIHHRQDILSSKNTASPTVGLDSAIVDKIIFGHELNQSYCLNSIDEVEKEILNRYDIKRESSFIISAENYIAPIIGECRHDFNAVVICEYDKKPYVQFIDSWKTSNILPSLQEIKKHFSSSGEFYVRAYDEKHD
Sequence
>complement(11327..11752)
SalmonellaentericaMSNHHESLEGFLRKRHSVSKLVVHLIFTTKYRCKLFDGQIIAQLRDAFGSAAAKLECEIIEMDGEQDHVHLLIAYPLKLGVSVMVNNLKSVSSRLLRQQNTHLRMQSKTGLLWSRSYFACSAGGATIETLKAYVLRQNTPE
Sequence
>11809..12126
SalmonellaentericaMLRATKVCIYPTPEQAEHLNAQFGAVRFVYSKSLHIKKHAYQRHGVSLTPRKDIKPLLAVAKKFRKFRKFRKYAWLKEYDSIALQQAVINLDVAFSNGTVANSRW
Click on a region to see details.
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Length: 12226 bps
Phages: 1
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Click on a region in the genome above to show details here.
Click on a region in the genome above to show details here.
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Click on a sequence to see details.
Locus 1: A7K97_RS28195 (Region 1)
Locus: A7K97_RS28195ORF Start: 1
ORF Stop: 75
Strand: Forward
Protein Sequence: GQASAFYYGDPLGEMRLVSRVFEM
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: A7K97_RS28195, hypothetical protein, phage(gi100027), PHAGE_Escher_RCS47_NC_042128
Homolog/Ortholog E-Value: 3.99e-10
Locus 2: A7K97_RS19380 (Region 1)
Locus: A7K97_RS19380ORF Start: 149
ORF Stop: 709
Strand: Forward
Protein Sequence: MALYGYARVSTSDQDLTLQTQILRAAGCEIIRAEKASGSGRTGRSELQLLLEFLRPGDTLMVTRVDRLARSIKDLQDIVYALNQQGVTLRATEQPVDTRSAAGKAFLDMLGVFAEFETNLRRERQMEGIAAAKARGVYRGRKPSIDPAEVYRLYTIEKMGATAIARQLGIGRASVYRALENYEQPA
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: A7K97_RS19380, hypothetical protein, phage(gi100013), PHAGE_Ralsto_Rs551_NC_047765
Homolog/Ortholog E-Value: 3.52e-42
Locus 3: A7K97_RS19385 (Region 1)
Locus: A7K97_RS19385ORF Start: 693
ORF Stop: 2357
Strand: Forward
Protein Sequence: MSSRRSAIPSDSLLQLRQRLDRLPPKSPERANQIAATAQLYGISVTTVYRALHLVLKPRTAHRSDHGQPRILPPSELEHYCELIAALKLRTTNKSGRHLSTGRAIQLLEEHGVETVQGLIKSPKGLLRKQTVNRWLSRWRLDQPRLLREPPAVRFQAENSNDCWQFDMSPSDLKHIERPDWVDPARGEPTLMLFSVVDDRSGVAYQEYRCVYGEDAESALRFLFNAMAPKTRSDFPFQGRPKLLYLDNGPVAKNHVFQNVMQSLKVDWLTHTPAGKDGTRTTARSKGKVERPFRTVKEAHETLYHFHKPETELQANEWLWNYLSRYNAQRHRSEKHSRLEDWLANIGQEGVRDMCSWEQYCRFAREPESRKVGVDARITIDGTAWEVEPDMAGETVILLWGLFDEEMYVEFTGETWGPYYPVSGPVPLHRYRTFRRGKAAERADRIHALARQLNIPISALSGSDLRVVSDDTQQRIDALPHQPFDTRKFEYHFPTVIAAKLAIADDLAIPLARMSDEDRAFIDSILTETLNRSEVLARIRDYFRSRQSGEDHAG
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: A7K97_RS19385, hypothetical protein, phage(gi100013), PHAGE_Pseudo_JBD18_NC_027986
Homolog/Ortholog E-Value: 1.89e-09
Locus 4: A7K97_RS19390 (Region 1)
Locus: A7K97_RS19390ORF Start: 2290
ORF Stop: 3315
Strand: Forward
Protein Sequence: MKYSPASETIFVADNQERTMRVEVMEHYGLTQSIEQAGYYETAHHKQLMKDIKGAIREGRLIAVCGVVGSGKTVTLRRLQQQLLDENKIIVARSLSVDKQSVRLATLINALFYDLAQDKQVQIHKQGERRERELQELVKKGKRPVALFVDEAHDLNGNTLTGLKRLMEVVEDGGGRLSVVLAGHPKLRNDLRRPTMEEIGYRTDIFTLDGITGSQREYIQWLLKTSTGKGKPEDILTTEAVDLLAMKLRTPLQVQLHLTLAMEAGYQTGEKPITATLVESVLSRQLDDLEPTLTRHGYRLKDMVEQFDAKPAEIRALFNNQLDPARTAELRDRMLAVGLPI
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: A7K97_RS19390, gp08, phage(gi48696918), PHAGE_Burkho_BcepMu_NC_005882
Homolog/Ortholog E-Value: 4.50e-05
Locus 5: A7K97_RS19395 (Region 1)
Locus: A7K97_RS19395ORF Start: 3504
ORF Stop: 4541
Strand: Backward
Protein Sequence: MPIIAAIPDEERQLMRKEAQQTHDKNHARRLIAMLMLHQGMTVTDVARLLCAARSSVGRWINWFTLHGVEGLKSLRPGRAPRWPVADILQLLPLLVQRSPKDFGWLRSRWSTELLALVINRLFDVTLHRSTLHRYLRQADMVWRGAAPTLKIKDPHYEEKRLVIDQALAQEQTAHPVFYQDEVDIDLNPKIGADWMPKGQQKRIATPGQNQKHYLAGALHSGTGRVHYVSGSSKSSDLFISLLETLRRTYRRAKTITLVADNYIIHKSRKVERWLEENPKFRLLFLPMYSPWLNPIERLWLSLHETITRNHQCRYMWQLLKQVAQFMNAASLFPGNQQGLAKVER
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: A7K97_RS19395, putative transposase, phage(gi15803522), PROPHAGE_Escher_EDL933
Homolog/Ortholog E-Value: 6.41e-120
Locus 6: A7K97_RS19400 (Region 1)
Locus: A7K97_RS19400ORF Start: 5148
ORF Stop: 6041
Strand: Forward
Protein Sequence: MDFLINKKLKIFITLMETGSFSIATSVLYITRTPLSRVISGLERELKQRLFIRKNGTLIPTEFAQTIYRKVKSHYIFLHALEQEIGPTGKTKQLEIIFDEIYPESLKNLIISALTISGQKTNIMGRAVNSQIIEELCQTNNCIVISARNYFHRESLVCRTSVEGGVMLFIPKKFFLCGKPDINRLAGTPVLFHEGAKNFNLDTIYHFFEQTLGITNPAFSFDNVDLFSSLYRLQQGLAMLLIPVRVCRALGLSTDHALHIKGVALCTSLYYPTKKRETPDYRKAIKLIQQELKQSTF
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: A7K97_RS19400, virulence genes transcriptional activator SpvR
Homolog/Ortholog E-Value: N/A
Locus 7: A7K97_RS19405 (Region 1)
Locus: A7K97_RS19405ORF Start: 6215
ORF Stop: 6379
Strand: Forward
Protein Sequence: MGINALAHATLLKKLNNGDYDGAANEFLKWDHASGQVVPGLTRRRSAERCLFLS
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: A7K97_RS19405, putative lysozyme, phage(gi764162325), PHAGE_Edward_GF_2_NC_026611
Homolog/Ortholog E-Value: 1.58e-17
Locus 8: A7K97_RS19410 (Region 1)
Locus: A7K97_RS19410ORF Start: 6553
ORF Stop: 7320
Strand: Forward
Protein Sequence: MNMNQTTSPALSQVETAIRAPAGNFAKYNYYSVFDIVRQTRKQFINANMSWPGSRGGKAWDLAMGQAQYIRCMFRENQLTRRVRGTLQQTPDNGTNLSSSAVGGIQGQAERRPDLATLMVVNDAINQQIPTLLPYHFPHDQVELSLLNTDVSLEDIISESSIDWPWFLSNSLTGDNSNYAMELASRLSPEQQTLPTEPDNSTATDLTSFYQTNLGLKTADYTPFEALNTFARQLAITVPPGGTVDCGYSACQPAV
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: A7K97_RS19410, virulence protein SpvA
Homolog/Ortholog E-Value: N/A
Locus 9: A7K97_RS28395 (Region 1)
Locus: A7K97_RS28395ORF Start: 7283
ORF Stop: 7450
Strand: Forward
Protein Sequence: MIAGTLRASRQFSFPRYQSSEQQTILQNLSDVIVQVHSTALYGGSTFEQAVEQTL
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: A7K97_RS28395, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 10: A7K97_RS19415 (Region 1)
Locus: A7K97_RS19415ORF Start: 7502
ORF Stop: 9283
Strand: Forward
Protein Sequence: MLILNGFSSATLALITPPFLPKGGKALSQSGPDGLASITLPLPISAERGFAPALALHYSSGGGNGPFGVGWSCATMSIARRTSHGVPQYNDSDEFLGPDGEVLVQTLSTGDAPNPVTCFAYGDVSFPQSYTVTRYQPRTESSFYRLEYWVGNSNGDDFWLLHDSNGILHLLGKTAAARLSDPQAASHTAQWLVEESVTPAGEHIYYSYLAENGDNVDLNGNEAGRDRSAMRYLSKVQYGNATPAADLYLWTSATPAVQWLFTLVFDYGERGVDPQVPPAFTAQNSWLARQDPFSLYNYGFEIRLHRLCRQVLMFHHFPDELGEADTLVSRLLLEYDENPILTQLCAARTLAYEGDGYRRAPVNNMMPPPPPPPPPMMGGNSSRPKSKWAIVEESKQIQALRYYSAQGYSVINKYLRGDDYPETQAKETLLSRDYLSTNEPSDEEFKNAMSVYINDIAEGLSSLPETDHRVVYRGLKLDKPALSDVLKEYTTIGNIIIDKAFMSTSPDKAWINDTILNIYLEKGHKGRILGDVAHFKGEAEMLFPPNTKLKIESIVNCGSQDFASQLSKLRLSDDATADTNRIKRIINMRVLNS
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: A7K97_RS19415, morphogenesis protein, phage(gi971757078), PHAGE_Pseudo_PaMx28_NC_028931
Homolog/Ortholog E-Value: 6.85e-06
Locus 11: A7K97_RS19420 (Region 1)
Locus: A7K97_RS19420ORF Start: 9564
ORF Stop: 10289
Strand: Forward
Protein Sequence: MPINRPNLNLNIPPLNIVAAYDGAEIPSTNKHLKNNFNSLHNQMRKMPVSHFKEALDVPDYSGMRQSGFFAMSQGFQLNNHGYDVFIHARRESPQSQGKFAGDKFHISVLRDMVPQAFQALSGLLFSEDSPVDKWKVTDMEKVVQQARVSLGAQFTLYIKPDQENSQYSASFLHKTRQFIECLESRLSENGVISGQCPESDVHPENWKYLSYRNELRSGRDGGEMQRQALREEPFYRLMTE
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: A7K97_RS19420, type III secretion system effector phosphothreonine lyase SpvC
Homolog/Ortholog E-Value: N/A
Locus 12: A7K97_RS19425 (Region 1)
Locus: A7K97_RS19425ORF Start: 10550
ORF Stop: 11200
Strand: Forward
Protein Sequence: MRVSGSASSQDIISRINSKNINNNDSNEVKRIKDALCIESKERILYPQNLSRDNLKQMARYVNNTYVHYSGNCVLLSACLHYNIHHRQDILSSKNTASPTVGLDSAIVDKIIFGHELNQSYCLNSIDEVEKEILNRYDIKRESSFIISAENYIAPIIGECRHDFNAVVICEYDKKPYVQFIDSWKTSNILPSLQEIKKHFSSSGEFYVRAYDEKHD
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: A7K97_RS19425, SPI-2 type III secretion system effector cysteine hydrolase SpvD
Homolog/Ortholog E-Value: N/A
Locus 13: A7K97_RS19430 (Region 1)
Locus: A7K97_RS19430ORF Start: 11327
ORF Stop: 11752
Strand: Backward
Protein Sequence: MSNHHESLEGFLRKRHSVSKLVVHLIFTTKYRCKLFDGQIIAQLRDAFGSAAAKLECEIIEMDGEQDHVHLLIAYPLKLGVSVMVNNLKSVSSRLLRQQNTHLRMQSKTGLLWSRSYFACSAGGATIETLKAYVLRQNTPE
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: A7K97_RS19430, putative transposase, phage(gi15834436), PROPHAGE_Escher_Sakai
Homolog/Ortholog E-Value: 8.83e-37
Locus 14: A7K97_RS19435 (Region 1)
Locus: A7K97_RS19435ORF Start: 11809
ORF Stop: 12126
Strand: Forward
Protein Sequence: MLRATKVCIYPTPEQAEHLNAQFGAVRFVYSKSLHIKKHAYQRHGVSLTPRKDIKPLLAVAKKFRKFRKFRKYAWLKEYDSIALQQAVINLDVAFSNGTVANSRW
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: A7K97_RS19435, putative IS transposase (OrfB), phage(gi80159731), PHAGE_Clostr_c_st_NC_007581
Homolog/Ortholog E-Value: 6.38e-10
Lysis
Terminase
Portal Protein
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Other
Transposase
Fiber Protein
Plate Protein
tRNA
Plate Protein
tRNA
Download data as .txt file: png_input file_download