Submission Results
Sequence Name: Not Available
GenBank Accession Number: 103422338
GenInfo (GI) Number: 0000000000
Download Results: 103422338.PHASTER.zip
gi|00000000|ref|CR954253.1| Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 complete 1864998, gc%: 49.72%
Download summary as .txt file: summary.txt file_download
Total: 2 prophage regions have been identified, of which 0 regions are intact, 2 regions are incomplete, and 0 regions are questionable.
| Region | Region Length | Completeness | Score | # Total Proteins | Region Position | Most Common Phage | GC % | Details |
|---|---|---|---|---|---|---|---|---|
| 1 | 10.6Kb | incomplete | 30 | 14 | 974293-984909 info_outline | PHAGE_Clostr_c_st_NC_007581(3) | 47.38% | Show info_outline |
| 2 | 7Kb | incomplete | 40 | 11 | 1682697-1689709 info_outline | PHAGE_Bacill_vB_BanS_Tsamsa_NC_023007(1) | 48.82% | Show info_outline |
Region DNA
>1 974293-984909 ATGAAAATTCTCTTGCCTTACTTCAAGCGATATAAAAAAGACGTTTTCCTGACTTTGATCACCATCGTCT TTTCAGCTTTTGCCACCCTCTACCAGCCCCGCCTGCTCCAGCAGGTGCAAAATGAACTGCTGGCTGACCA GCAGCAGGCCGTCATCCGGGACACCGCGATTTTGATCGGCCTGGGCCTTTTATCCATTATTACCGGGGTC CTCAACGTTTACTACGCCTCCCGGATCACCCAGGGCGTGGTCAGCGACCTCAGAGAAGACACCTATGCCA AGATCCAGACTTTCTCTCTGGCTAATGTGCAGCAATTCTCCTCTGAATCGCTCAGCGTCCGCTTGATCAA CGACATGCAGCAAATCATGAACATGATCATGACTATCTTCATGCAGCTGATCCGGATGCCTTTGATCCTC ATCGGGTCAATCATCATGGCCATCGTCACCATCCCCCGCTACTGGTGGGCGGTTGTCGTCCTCCTGGCCT TGATCATGGGTCTGGGCGTTGTGGCAGTCAAGCAAATTACCACCATGTTCGACAAGTTCCAAATGTACAT GGACAAAATCTCCGGCCGGACCGGGGAATTTTTGCAAGGGGTCCGGGTGGTAAAATCCTTCAACCAAAGT CCCCAGGAAATTGCCAAATTAAACAAGGATTCTGACGAATTAAACGAAGTCAACATCAAGGTCGGCTACT GGTTCTCCACCATCCTGCCTGGTGCCCAACTGATCTCCTACCTGGTCATCAGCTTAGTGGTCTACTTGAT CGGGACCAGCATTCTCCAGCATCCCCAAGACGTTTCCGTCATCACTCCATACGTCAACTATGTTTTGACC ATGCTCTTTGCCATCCTGCTGGTCGGCATGGCCGTCATGCAGATTTCCCGAGGTAACGTCTCCTTACGGC GGATCCAGGAAATCATGGACACCCAGCCAGACGTTGTCTTCAATGAAAAAGCCCCGGAAGACGCCTTGGG CGGTTCAATTGAATTTGATGACGTCTCCTTCACCTACCCAGATGGCCAGCAGCCCGTCTTAAAGCACATC TCCTTTGCTGTTGCACCGGGCCAAATGGTCGGTATCGTCGGGGCAACCGGGTCGGGTAAGTCGACCCTGG CCCAGCTGATCGCCCGCCTCTATGACCCAACAACTGGGAAGATCAAGATTGGCGGCAGCGACCTCCGCCA GGTTAATGAGAATGCCCTCAGAAAGACTGTTTCCTATGTTCTGCAAAAGGCTGTCCTCTTCTCAGGAACC ATTGCTGACAACCTCCGCCAAGGGAAAAAGGATGCTACTTCATATGAACTTGAACGGGCAGCGCAAATGG CCCAGGCCAGCGAATTCATCCAGCGCTACGATGAGACTTTTGACCATGAAGTTGAAGAAAGAAGTGCCAA CTTCTCCGGCGGGCAAAAGCAGCGTCTGTCTATTGCCCGGGGGATCATCGCCGGCAGTCCGATTTTGATT CTGGACGACTCAACTTCCGCCCTGGACGCGGAAAGCGAAAAGCTGATCCAGGAAGCCCTGGAAAAGCAGC TGCCTGACACGACCACGATCATGATCGCGGAAAAGATCGTTTCTGTCATGCACGCGGACAAGATCCTGGT CCTCGATAACGGCCGCCTGGTTGCTGAAGGGACCCACGAGGAACTGCTCAAGACTTCCCCGGTTTACCAG GAAATCTATAAAACCCAGAAAGCCAAGGAAAGAAAGGAGGAACTTTAATGTCAGACAAGCAAAAGTCTCT TACTTATTTGACGAAATATCTGAAAAACTACAAAAAGCCGATCTTAATTTCAATTGCCTTCTATCTGATC GCGACCATCGCCCAGGTCATCGCTCCCTCCCTTTTAGGGCAGGCGGTTACGGACTTGTCGGCTTTTGTTA AAGGGCAAGGAAGTCTTGGCGTCTTCTACCAGGCCTTAGCCTGGATGGCCGGCTTTTATGCCTTTAACTC CGTGGCCACCTACATCGCCTGGATGATGATGACCCGCTTTAACGCTAACGCCAACAACGACATGCGCAAG GGCCTTTTCGGCAAGCTGCAGCGGATGACCTTCCGTTACTTCGATACCCACCAGGACGGGCAGATCCTGT CCTTGTTCAACAGTGACCTGGACAACATCTTCAATGCGTTAAACAACGCCTTTTTTGAAATCATCTCCCA GTCCCTCCTTTTTGTCGGCACGATCATTGTTATGTTTGTCATCAACTGGAAGCTGGCCCTTAGTGTTGTA GCTACTACTCCTTTGATCTTGCTTTTGAGCTGGATCATTATAAAAAAAGCCCGCGTCTACCTGGACAATC AGCAAGACCGGGTTGGTGAGCTTAATGCCTACATCAACGAACAACTCAACGGGGAAAACGTGATCATCAC CCAGGGCCTTAGGGACCAGTCAGTTGCCGGTTTTAAAAAGGAAAACGCCAAGGTGCGGGAAGCCATGTTT AAGGGGCAATTCTACTCTGGTATCCTTAACCCCTTAGTTACCGGCTTCTCCCTCTTGAACTTTGCGATCG TGATCGCCACTGGCGCTTACATGATTATGACCAAGCAAGTCAGCAAGGCGGCTGGTCTGGGCTTGATCGT GACTTTTACTGAATATTCCTGGACTTACTTCCAGCCGCTGACTCAAGTAACTTCCATCTACTCCATGCTC CAGCTCGCCTTGACCGGTGCCAGACGGCTTGAGACGGTTGAAGAGCAGGAAGAAGAAAACACGGTACCAG ACGGCAAGACTATCTCAGGCGTAAATGACGCTGTCCGCCTGGAAGATGTGCACTTTGGCTACACTCCAGA CAAGGAAATCCTGCACGGGGTATCAATTGAGGTGCCTAAGGGGCAGTCTGTCGCTGTTGTTGGCCCGACC GGGTCTGGTAAGACGACGATCATGAACTTAATCAACCGTTTCTATGACGTAAACAGCGGTGCCGTAACTT TTGACGGCACAGACGTCCGGGACCTTAAACTGGAAAATCTCAGAAGCAATGTCGGGATTGTTTTGCAAGA CTCAGTCCTCTTCTCTGGGACAGTAGCTGACAACATCCGCTACGGCAAGCCGGATGCTACCATGGATGAA GTTATTGCCGCGGCTAAGGAAGCCCAGCTGCATGACTTTGTCATGACCCTGCCAGAGCAATATGACACGC CGATTGAGAATGGCCAAGCAAATTTCTCTACCGGGCAAAAGCAGCTTTTGTCAATCGCCAGAACTATTCT GGTCGATCCGGCCTTCCTGATCCTGGATGAAGCAACCAGCAACGTCGACACGGTTACGGAAGAAAAGATC CAAAAGGCCATGGACAACGTGATTGCTGGCCGGACCAGTTTCGTGATCGCCCACCGTTTGAAGACGATTT TGAACTCAGACAAGATTGTCGTATTAAAGGACGGCCAAGTCATTGAAGAAGGACCGCACGCCGACTTGAT CAAGAAGCGCGGCTTCTACTACAAGCTCTACACTAGCCAGATGGCTTTTGAATAAGGGATACATGCAAAA AGGACACCTGTCACAGATGTGATGGGTGTCCTTTTCTTATCTAAATTTTTGATACTTGATCTCTACTTTA TTCAGTCTTACCGCTATAGTTGGCAATCCCGCCAATATTTTGGACTTTGCTGTAGCCAGCTTGCTTAAGC CAGGTAACTGCGTGGCCGCTCCGGTTGCCGCTGCGGCAATAGACAAAGAGCGGGGTATCAAGATCCGTGA TCTCTTCTCTGGCTGCCTCAATACTGCTCAAGGGGATGTTGATGCTGGCCGGGATGTGCCCTGCTGCGTA CTCATCCTCTTCTCTGACGTCGATTAATTTAGCCTGCAGCGTTTTCTGGTATTCTTCAACGCCGGCGTTA ACGTCATTTGCTTGAAATAGGCCCATGTACTCCTCCTTAAATTTGCATTAATATATCGGATTATAGCACA TCATTCATCCATGCGCTTTAATCAGCATGCTGTCAACAAAGTCGCTGCCAGCATCACTGACAGTGCTTCT TAACCATGCAAATTTCAGCTTGGAGCTATCGAACTTGTCCAGCTCCCGGTCAATGTCCTGCCAGAGTTCC TGGTTGGCTACCGGCTTTCCGTTAGCCGTCTTCCAGTCCCGCTTTTTCCAGCTCTTCATCCAGGCCGGGC CATCTTTTGTGTAGCTAACCGACTTGATAACGTACTGGGAGTTCAAGACAAACAGCAAAGGCTGCTGGGT CAGACCCAACTGTTCCAGCTTCTTCAAGCTTTCCAGAAAAGCAGTCATTTCCATTTCGTTATTGGTGGCG CCCAAACGGCCGGCACTATCAGCAAGCTGCTTGCCATCATGCTCGATCATGTAGGCCCAAGCAGCCTTAT CGCTGTCTTGGACATGGGCCGCCCTTGCGCGTGCCGGTGCTGCCTGCGGCAGGCACCCCCGGTATAAATA ACGGCAGAATAATCTTTCTTATCGTATTCTGGCTCCTGCTTAACTGCATTTTGCGGATCAGCTGGATCCA GCTTCAAGTAGTTCAAGGCATCCGACTCACGGCTGAAGGACTTGTATTCAGCTCCCGGGAAGCCGTTTAC CTGCTTTTCAGCTTCCGGCCAACTGTAATAGATTCCTGGCTGACGGCCTTTTCTGACAGCATAAGTTTTT TTAGCTTTTTCTGCTTGCTTCACTTCAGTATCCGCAACTTGTTCCGCGGCTTCCAGCTCTTGATCATTCT TGATCTCTGCCTTGTAACGCCTCAGGCCAGGCAAGCGGCTGGAGAAAAGATTGATGATACTTACCAGGTC ATCCACCAGTTCTTGGCTGGGGCTGGTCGCGGGGTTATTGATGACCACGATTTCACTTCCATGGCGCTTG CAGAAATTGGCAAACCAGTCAAAAGCCAAGCGTACAAAGCGGTCTTTGTGGGTCACGTAGATCTTGTTGA CCTCGCGGTCTTCAACTTTCTGCAAGAGCTGATTCCATTCCGGACGGTTAAAATTCAGACCGCTGCCAAT GTCTGACATATTCTCACTCACAGTAATGCCGTTGGCATTACAGTATCCAGCAAAAAATTCTCCTGCTTGG CCAAATCATCGCTTGTCCAAGCCGACGACACGCGAGCATAGATCACGTTTATTCTGCCGTCGTTGCTGGC TGCGCCAAGATACTCGTTAAGTTGCTCTTGGGTATAGTAACGCCGATTTGTGGCACTTCTTTCAGCCTTA AGTTTGCCCTCACGATCCCACCTTTGCAGAGTGGCAACAGAGACGTCAAGGATTTCAGCAGCTTCGCCTA CTTTGTATTTCTACACGATAAAAGGCCCCTTCACATTGTTTGCTACTAGTATAACATGACTTGCATACTT GCTGTTGGCAGTTACACATAATAATGGATACGAATGGCTGCCACCGATTGCAATTAACTTCTAGGCCGCG ACTTTTTCAAGAAGCAAAGAACAGCATCCCTCTTCACAGAATGATCTGCGCGAGAGGGATGCTGTTGATA AAAAATAGAATTGTTACATCTTGTCCATCTGTTCATTAACAAGGGCGTCAGCCAGGTTGTTGCCATCGCT ATTAGCATGGCCAGTGACGTGCTGCAAAGTCAAATCGGAGAACTTAGAAAATTCCTTATCAATTTCCTTC CACAAGTCCGGGTTGGCAACTGCTTCCCCATTTGACTTTCTCCAGCCCCGTTCTTTCCATCCTTTGATCC AAGCAGTCCCATTGGAAGAGTCACTGAGGGCTTTGCGAACATAGTCTGAATCTAAGGAAAGCAGCAGCTT CTTCTGGCTAAGTCCCATGTCTTCAAGAGCCTTCAAGCTTTCAAGAACAGCCGTCATTTCCATCTGGTTG TTAGTAGCGCCGACTTTGCCGCCAGTAGCGGTCATGGCATGTCCATCATGCAAGATCACGTATGCCCATG CTGCCTTTGTCAGTTGGCAAAACGTGTTCACCTTCATTGTTGCGGCAGCCACCGTCGGTAAAAATCCAGG CATCGTATTCGGATTCAAGTTAAAATTATACCATGCCAATAAGAACTATATTGTTTTCTTTTTTCACTCA CCTGCATCACTAGGTTTGAATTTCGTCTCAAAACCTTATCAAGGTTACACCCTACGTTATTCACATGTTT TAATAAAGTCAAAATGCATGGCCTGATTAAATATCAGCGTCATGCCTTTTTATTGTTCATCGTACAACAA TAAAACTAATAGTCGTCCTGCTGTTTCCAATACCTAATATGTGCTGGATAACTCACAGAAACATGATCAT CTTTTATTAGTATCTCAAGATCTTTCGGTCTTCCATGCTTCGCAACTGACTGTCTCACACTAATTGCTTT ATCATGAACTAAAATATCAAGGTCTTTATCACGGCCAAAAATTGCAACTCCTCGACGAACAGAAACTATC TTGTCATGTACCAAAACGTCCAAGTCTCGGTCTCTACCTTGTTTCGCGACGGCTTTCCGCACACTAGCAA CTTTATCTTTCACTAATATATCTAAATCTTTATCGCGTCCACATTCAGCAACGATGGCACGAACTTTCCA ATCTGGATCGTGAACCAGTATATCCAAATCTTCATCACGGCCTTGATGGGCAACAATTTCACGAATCTTC TCATTACTGTCATTAACAAATATGCTCAGATATTTATCTTTTCCAGTAAATGCTACATAGCTACGCACTT TTAGATCTTTATCATGAACAAGTCTGTCTAAATCTTTTTCTCGTTCAAATGAAGCAACAATACATTATCT GAGGAATCATTACTTTCTCGTAATTTTTGAAGTTCTTCCTCAGTTACTGTCCAATAGTCATAGCTGATGT AACTTTTATACTTATCTCGTAACTTGTATTTCTTCATATGATTGAATACTAACCAGAAAAGCTTTTACCG TAAATCCTCATAGCCCGGCTTGGTTAAGACCTTAGCCGCGTAAGAACAAGTCGCCCGCAGTCTGGCCCCC TTCTCCCGGGCAGCAGAAGCAACGGTATCAACCAACTTCCGGCCCAGGCCTTGTCCGCCATAGGCTAGAT CTACCTTAGTCGTTGTGATGATCCAGTGATCACCCTTATCTTCATATACGCACTGGCCAATCAGCTTGCC GCCATCATATACCGCGGCCCGCTTTTGCTCTTCTTCAAATTTGATTTCCATCTTATTCACCTAAAATTGC TTCTTCCAGCTTTTCAGCTGTATCGACAATCACAGTTGCCCCGTGTTTTTGCAAAAACGGCACGCTTCTA AAGCCCCAATTTACCGCGATTTCATCCATCTCAGAATTCCGTGCGGTCTGGATGTCAATTTCAGAGTCGC CGATATAGACGCACTTGTCTCTTGGTACGCCCAAGACCTTGACGCACTCACTAGTCATGTCCGGAGCTGG TTTGCGGCGGATCCCGCTTTTTTCACCCAAAGCAAAGTCGAAGCTGCCAGGGAAAAGCTCTTCGACCAGG ACCTGGACGGCTTCATTTGGCTTGTTGGAAACGACAGCCAGCTTGACGCCTTTTTGACGGAGATTTTTCA TCAAATCCAAGATGCCTGGAAAGGGACAAGTTTTAATCTGGCAATGGTCAGCGTAATAAGGCTTGAAAAC TTCCAGGACCCGGTTAACTTCTGCTTGGGTAACGGCTTCAGGGATCCGTTCATCCTTGGTGCCAAAGGCG ACCAGACTTTCCCGGCTGCTGCCAGCTTCATAGGCCAGGGCCCGGGTGACCGCCACCACGACCCCGCTGC CAAAGAAGTTCTTGATGTCTTCAACGGTAAAGTCATGCCGGTGGCCGGTTTGTTCAAACGCGTAGTTCAA TGCACTTGTTAAGTCGGCGCTCGTGTCTAAGATTGTGCCGTCCATATCAAAAATCGCGGCTTTATATTTC ATCAGTTTCACCTCGCTTTCATTATACCATCTGGCAGAAAAAATAGGCCTGCCCATATAGAGCAGACCTA TTCCCTTCCCTGTTAGCGAGGGAAAAATCAATTATTCATCATCGCGCTTCTTGCACCAAGTTACTTGGCT AGTGTAGGTATCATTGGAGACGGTGCTGCTTGTCGCATCAGTGGTCGTTGTACTGCTGTCATTGGCAGTA TTTGTTGCAGTATTTGTACTGGTGTCATTTGTAGTCGTTGCAGCGGTATCGCTTGTAGTAGTTGAAGCAA CATCTTTTGTGCTTGCAGTTATCTGTCTGCTAGCGGAGGTAATTATGCTGCTCTTTTGCTAAGTAGTCGT CACCTCAGCAGCTGTATTGTCAGCCGCGGCTACCTTGCCAGGCGTAAATGTAATTGCCAGCCCGCCTAAT GAAAAGCCGAGCAAAACAGAGGCCAAATCTGTATTGACCTTTCTGAAACTGTAATGTTGTTCATTTCAAT CCATTTTCTGAAGCTTGTTTCTCGCAGATTTCTTCGCTTCAATCATGTCAAACTTCTTCCCATTTTTCCA CGCAATAAATTAGAACACCATTCGCTAAGACTATTAGCGATTACGACCCGTGTTTTCAATTTATTTAACA TACGTTTTCGAAAGTTTTTTGATTAAAATTTGATAGGTCATTTTTTATTCTGCAACTATAAGTCGCAAAT ACAATAAACAATTTATTATATCAATCAAAAAAGCTGTATCTATCAAAATGACAGATACGGCTTGGGTAGC ATTTATAGAACTGTTTGAATTAACTTATTAGATGTGGCTTGCCCCACTTGCCGCGTCAACGTGTGCTTCT TGAGCAACAGCCTTCCCTGGTTCATCTGCTGTCAATCCAGCAATAGATTGCCCAGCCAGACGGCCAAAGG TGTGCGCGTGGCTGGCTGCCGGTCATTGTAGCTGCCCCAGAAGAAGCCACCGGCATCGTTACCTGCCGCA TACAAGCCATAAAAGCCATAAAAGCCTGGAATTGGGTCATGATTTTCATCTAAAACTTCCATCTTAGTGT TGATTCTGAGCCCGTCAAAAGTTCAAAGGATGCGGCCACCCAGAACGCAGCCGTAGTAAGGCTTCTTCTT GATTGGCGTAATCCGGTAGGCTTCCTTAATGTAATCAGACAGGCCATGCTCTAAACGAAGAAACATGGTC CCGTTAAAAGATGCTTCAACGCTTTCCAGGCAGGTCAAGTTGACGACGGCTTGTTTGGAAATCTGCATGA AGTCCTGTCCCAGCTGCTGGTAGACCTCATACAGGCGCTTTCTGGAAAAATACTTGCCTTTTCCGGTGTA GATGACCGTATCGCCGCCTTCGACCCGGACGAGGATAGCGTCACTAGGCTTGATGATGACCAGGCGGTCT TCCTGCTGGGCGATTAACGGGCCAGAGCTGGCGCTGCTTTCCAGGAAAGCAACTGCCCGCTCAACCTCTT CAGTCATTTTGTCGGTATAGATCACTGCCAGGGGCAAGTCCTGGTCTTTATTCAGCTTAACTTTAACCTT CATGCTGGCCACCTTCTTTCTCTTTGGCTCTTTTACAGTATTATCGTATCGTTTTTTGCCGGTCTTGTCC CAGCTTTTCCGGTAAGATGCAAATAGAGCCTCCAGAGAAATCCTGGAAGCTCTATTTCTACTCTAAGTCA AGTGTTATCAACGATTTTAGGCAATTTTATTTTGAAATAAGGGCCTAATCGGGAAATAGCTCCCGGAGAA TCAAGACAAATATCTGATTTAGGGCATGGTAAATACAGCCACCTTCTGTAATTTCAAAAAAGAGGCTGTT ATAATATCTATTGGATCAATTTTTATGACAAAAGTCTTTGGTTATGTTTGGCTACGTCATAGCTATACAA TTGATCATTCTTAATTAAAGCGAAGATCGTCCGTAATAATTTATGGATCGATGCGATAGCGGCCTTCTTG TGACTTGCAGTCTCAGAAGACCGTTTTCGTTTTATTTCTGTAAAAGCAACATTAAGTCCTCATAGCCGAT CACTGCCGTCCCTTTTTCAGCAGCTTTTTTACACTTTCCGGTGACATGATCCAGCTCGCCCTTTAGCAAG TAGTCAGTCACGCCGGACACCGAGCCGGTCACCTTGCCGCCGTGGCTTTGAATCAAACTGGTCAGCTCAT ATCTGGTTGCCTGGCGGAACTGGCCGGTAATCACAAAACGCTGGCCAGCCAGGCGGGAGTCAACCTGCTT GGGGGTAAAATCAATTATTTCCGTGGCTTTAGCTAAATCTCCGTCGAGGAGTTTCTGGTAAACGATATTG TTGGTAATACAATCGCTAATGGCAATGTGGAAGTTGATATTGATCCCATAGTATTCTTTCAGAGTCGACA GTCTGACGTTAGGGATAGGATCTGCAAAAAGACCCCTCTTTTTGTAACTATTGGCCAAAAGCAAGGTATC CAGTTTCGGATTAGCCACCGGATAGCCGTTATCGGCCAAAACATTGCAGTCAAAACTAAGTATATTGTGG CCAACCAAGGTATCGTCGCCGACAAAGTCCAAGAAGTCTGGCATAACTTCATCAATCAAGGGAGCGGCAT CAGTTTGGTAATTGCTGATGCCGGTCAGATGAGAGACATAATCATTAATTTTCTCCAAGGGGTTAACATA AGTTGAGAACTTCGCTACGGTTTGGTCGTCTCTGACCTTTAATGCCCCAATTTGGATGATCTTTTTCCCA GTTGTTTCCAAGTCAAAAACCGTGTAGTCATGCAGTTTAGAATCCAT
Region Details
| Region | 1 |
| Region Length | 10.6Kb |
| Completeness(score) | incomplete(30) |
| Specific Keyword | transposase,plate |
| Region Position | 974293-984909 |
| # tRNA | 0 |
| # Total Proteins | 14 |
| # Phage Hit Proteins | 7 |
| # Hypothetical Proteins | 3 |
| Phage + Hypothetical Protein % | 71.4% |
| # Bacterial Proteins | 4 |
| Attachment Site | no |
| # Phage Species | 6 |
| Most Common Phage Name(hit genes count) | PHAGE_Clostr_c_st_NC_007581(3) PHAGE_Synech_S_CAM9_NC_031922(1) PHAGE_Cronob_vB_CsaM_GAP32_NC_019401(1) PHAGE_Acidia_virus_NC_029316(1) PHAGE_Escher_slur09_NC_028840(1) PHAGE_Clostr_phiCDHM13_NC_029116(1) PHAGE_Salmon_NR01_NC_031042(1) PHAGE_Pectob_My1_NC_018837(1) PHAGE_Entero_DT57C_NC_027356(1) PHAGE_Pseudo_EL_NC_007623(1) PHAGE_Plankt_PaV_LD_NC_016564(1) PHAGE_Pseudo_201phi2_1_NC_010821(1) PHAGE_Vibrio_pVp_1_NC_019529(1) PHAGE_Microc_Ma_LMM01_NC_008562(1) PHAGE_Bacill_SPbeta_NC_001884(1) PHAGE_Bacill_G_NC_023719(1) PHAGE_Clostr_phiCDHM11_NC_029001(1) PHAGE_Clostr_phiCD506_NC_028838(1) PHAGE_Clostr_phiCT19406A_NC_030950(1) PHAGE_Salmon_Shivani_NC_028754(1) PHAGE_Clostr_phiCD481_1_NC_028951(1) PHAGE_Escher_T5_NC_005859(1) |
| First Most Common Phage # | 2 |
| First Most Common Phage % | 21.42% |
| GC % | 47.38% |
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| # tRNA: | The number of tRNA genes present in the region. |
| # Total Proteins: | The number of ORFs present in the region. |
| # Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
| # Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
| Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
| # Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
| Attachment Site: | The putative phage attachment site. |
| # Phage Species: | The number of different phages that have similar proteins to those in the region. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
| First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
| GC %: | The percentage of GC nucleotides of the region. |
Region DNA
>2 1682697-1689709 CTATAGAACTCTTCTTGCCCGACTAGGCCAGAAGTAGGTGGACAGGCTCGCTTGTACAACACCCTGCTGG TCTCCAGCAGCGGTAACGTACTTCCCATCCCCCACGTAAATGGCTACATTATATGGTTTATTCTTGGAAC CCCAAAAGAGCAGGTCTCCTTCCGCAAAGCCAGAACTTGGATCAACCGCAATCCCCTTCTTGACCTGGCT CTTGGTGCTGGAACCTGTATTGACGCCAGCTGCCTGCTTGTAGACATAAGCAACCAAACTGGCATTGTCA AAGGCATTCGGGCCCTTGGAGCCCTTGACATAGGCCTTGCCGACCTGCTGCTTAGCCAAAGACACGACTG CCTTAGCCCGGGCCTTAGACCCCATCGGGGCAGACCAAGAGGCTGCCAAACTGGCAGCACTGCGGGCCTT CTTAACCGTCTTCTTAGATTTAACCTTGGTCTTCTTGGCCTTCACGGCCTTCTTGGCAGACTTGACCTGG TTAAAGTACTTGGCCATGACCCATTCCTTCTTGCCAATCCGATACCACAGATTGCCCATGGAGTCAGTTG CCGTCTGGTAGACGAAGTGACTGCTACCCTTCTTTAAATGAGTCGCAACATGCCGCCCCTTCTGGTAGTT GGTCCAGACAGTGACAGATTGCTTGCTGATAACCTTGATCCGCTTGCTGGCGGCCTGGACCGGCTGCTTG ACCGGCTTGACCCCTGTCGCTGAGATCCCTAAGAAAGTCAGCGCTGCAGCAAAGAACTTGATCATATTAG ACTTCTTCATGCTCATTTCCTCCCTTACACCGCTAACTCTATTTTAACACGGAAACTAGAGAATCCGCCG GGCCGTTGTTGGCCAGAAGTAACTGCTGATGGTTGCCAAGATAACCCCTTGCTGCTCATCAGCGGCGGAA ACATATTGACCATTACCAACATAAATTGCAACGTGATATGGCGCTGCCACATCCCCCCAGAAGAGGAGGT CCCCCGGCTGCAGGCTGGCCGTTGATACCGGCACAGCTACGCCTTCCTTAACCTGGGTATAGGTAGTCCG GGAAACAGTTTGCCCAATCGCGGTCTTGTAAACCCACTGGACTAAGCCAGAGCAGTCAAAGCTGCTTGGA CCGGTCGCGCCCCAGACGTAAGCCTTGCCGACTTGCGCATTTGCCAAAGCAACTACCTTCTTTTGCTTAG CCGCCTTAGCAGCCTTAGCCTTAATTGAAGCGTACTTCTTAGTCGTGACTGTATTAGTCCCCAGAATCCA CTTGTTGTCCTTGATCCGGTACCAGGCCCTCCCCTTGTACTGGGCCTGACCCGTAGCCGTGAACTTGTAG CCGGACTTAACCTGGCCAACCAATTTCTTGCCGGCCCCGTAAGTGGTCCAGGTGTTGACCTTATTACCCT TATTGTAGGCTACCCGGGTCTTCTTCACGATCGTAATATTGCTGTCCTGCCTGTCCGTTGCCGCGTAGGC CGGCTGCGCCCCGCCCAGCCAAGCTGCCAGCAGTAAAAGGACTAAACTGAACGCTTCATTATAACTGTTT TCTCCTAAATTGAATTCGCTTTTTCTAGTGTAAGCAAGTTGTGTTACAGAAAGGTTACAGAAAAATACAG TTGTTTTTTAATAACAAAAGGCAAAAGAAAAAGGACGCCAGCTGGCGTCCTATATAAAGGATATTTCTCA ATTAAATCAAGCGCTTGGCAGTTGATGGCCAGAAGTAGTAACTCAGGCTCTGCTTGATCACGCCCTGGCT TGGAGTAGCCGCGTGAACAAACTTGCCGCCGCCCACGTAAATCCCCACGTGGTATGGTGAAGACTTGGAA CCCCAGAAAAGCAGGTCCCCCTTCTTCAAAGTTGCCGTAGAAACAGCAACCGTCTTGCCTTGGTGCACTT GCGTGTAAGTGGTTCGGGTAATGTACTTGCCCAGGGCCAGACTGTAAACGTAGCTGGTCAAGCCGGAGCA GTCAAAGCTGTAAGGACCAGTAGCGCCCCAAACGTAAGGCTTGCCCACTTGGGCCTTGGCCAAGGCAACA ACCTTGTTCTGCTTGGTCTGCTTGCTCTTAGATACCTTCTTGGCTGCCGCAGCCTTCTTAGCTGCCTTGG CAGCGGCCTTCTTAGCAGCTGCTGCCTTCTTGGCCCAGGCTTTAGGACTCAAAGTGTAAGAAGCCAGAAT CCATTCGTTGTCAGCGATCTTGTACCAGGTTCGCTTCTTGTACTTAACTTCGCCGACCACCGTCAAAGTA GTCCCGTGCTTGAAGCTGATGCCAGTGTCGTTGGCCGCGCCAAGCTTAACCTTGTAATTCTTCCAGGCCT TAACGCTGTAGCCAGACACGTAGTTGACTACAACCTGCCTGTTAACAGCCTTAACAGTCGCTGCCTGGGC TGCCGGAGCTTGGGCGCTGGCGGCAACAGGTGCGACCAGAGCCAGGGCCATTAAAACTTTGACTAATAAA CTCTTGAACTTCAAAACTTGATATCCTTTTCTATTCTAATTTTTTACACAGGTTCTATAATAAGTTACCG ATGTTACAAGAATGTTACAAAAAGAATACTAGATTGTTAAAATTAAATCTAATTCGCCAATTGCAAGAAT AAATTGAACACTTACCATAACATCTGGTAGATTTTGACTATCTACGCCGGTAAATGCGGTCAAGTTCGGT GTCAAAGTACTCTTCTGGAGTCTTGTAGTTTAAGATCTTCCGAGGAAGAGAGTTGCACCATACCTCGATC TTAGCAATATCTTCCACACTGTACTTATCTACTTATCCATACGGTCTCCCTTGGGAATATAGCGTCTGAT AAGCCCGTTGTGCCGTTCTACGCTGCCTTTATCACAGGATGTATAAGGGTGAGCGTAGTACACAAGAGTC TTGGAAACTTGCTCAAGATCGGATAGATCTGCGAACTCAGATCCGTTGTCGGTTGTGATAGACTTAAAGA TTTGATTCCATTTGGATCCGTAGTACTCTCGAAGCTTATCAAATGCCTTCATAACGCTAGCTGAGGTCTT ATCCTCGATCTTGATCATGAAGAACTGACGCGTCTTTCGTTCGCAAACACATCATCGTCCTTAGTCTTGT GTCCAAGAACCAGATCGCGTTCCCAGTGACCAAAGTCCTTACGGCTTTCGATTCTAGGACTACGTTCATC GATGCTTCGTCCCAGGATACGCTTGTTTACACGGGCACGACGAGTCTTAGTATTGCGCTTGACCTTCTCT GGAAGATCACCGTTCTTGATATCCATTAGGCCCAAGTCAACGTAGTTATACAGAGTTTTGGTTGATACGA CCTGATCCTTCTGGAAGATTCCCTTGGCCAAAGCATAACCCACGCAAGCATCAAGAGACCAGCCATGATT ATGGAAGCAGTGGGAAACATAGTCAATGAACTTATGTCTGCGAAGAAACAAGCTCTTGCGGCCGCATTCG CTTCTATGTGGTTCGTAAGTGCTTTGCCCTTCGACAGCTTTATACCGATACACGGATACTGTGCCTCTTT TGAGCTCATATCCGACCGTGCTTGGTGAGCAGTTAAGTTCTCTAGCTATAGCACGATTAGAGTAGCCCTT AGAGTGAAGCTCCTAGATTGTAGTCCGGTCGTTCAGCTTAAGGCGCTTGCCCTTTTGGTGTGGTTTAGTG TTAGAATAAGAATGATCCATTTTAACCTCTCTAGAAATGTTTGTGGTAATTCATATTCTACCAGATGGTT AAAATGGATTTTTTGTGCTCTAATCCAGTAAAAACGATTTTTCTTACTGGATCGGAACAGTGTTCAGTTT AATTTTACAATCGGCGATTAAATCTAATTTAAAAAGGCCAGCGCTTTTTGCCGCGCTGACCTTCTTTTTT ATCGTTATTATCGTAATTTTAGCAGGTAATGATAAATTAGATAACCCGCTTGGCGGTTGATGGCCAGAAG TAGGAGCTCAAGTACTGCTTGCGGACACCTTGGCTTGGAGTAGCCGCGTGCACGTACTGGCCGCCGCCCA CGTAAATCCCAACGTGGTATGGGGAAGACTTGGAGCCCCAGAAGAGGAGGTCACCCTTCTTCAAGCTGGC AGTTGAAACCTTAACAGTCTTGCCTCGGTAAACTTGGCTGTAAGTAGTCCGGCTGATGTACTTGCCAATG GCGTGGCTGTAGACGTATGAAGTCAAGCCTGAGCAGTCAAAGGCGTTAGGACCGGTTGCCCCGTAAACAT AGCGCTTGCCGACTTGCTTCTTGGCCAGCTTAACGACCTTGTTCCGCTTGGTCGTCACGCTTGCTGCCTG GGCCTGGTGGCTGTTTTCCTGAACGGCGATTGGCACAACCAGGGCCAGGGCTAAGGTCAATTTTACTAAG ATCTGCTTAAACTGCTTCATTACGTTGTAACCCTCTTTCTCTTTTCTCGATGCTTATATCATAGCCGATG AGTGTTACAAGAAATTTAAAGACCGTTTGCAGTTTCTTTAATAATCCTTTTCAGTTTTTTAACATCCTGC AATTTTTTCGTAAAAAAAAGGCCCTGGCAAAGAGCCAGAACCTTAATTTATTAAGCCCGCAGCTTCTCAG ATGCGGAAGTGGAGCTTTCCGGTGCAGCCACGACTTCATTGCGGGCATCAACTGCCCCCTCAGTGGCCAT GTTATGGAAATTGTTAAATGACAAGGAGATCATGTCTTCCAAGGCTGGTTCAGTAAAGGAGCCCATGTGC GGAGTCAAGAGCACCCGCGGGTAAAGATCCATCAAGGACTGGACTTCCTGGTCCGGCACGTCGCTTTCAC AGTCAAAATTGTGGCCCATGATCTTCTTTTCATTGGAAACCACATCAGCGCCGTAGCCAGACAGGTGGTT ACTGGAGACAGCAGCGGCGATGGCTGCTTCATCAGCCAGTTCGCCCCGGGCCGTGTTGACCAAGACTGCC CCTTCCTTCATCTTAGCGATGAATTCAGCGTTCATCAGCTTGTCGTTCTCGCCTGGGAAGTATGGCACGT GAACGGAAACGATGTCACAAGTTGCCAGCAGTTCGTCTTCTGTTACAAAAGTGCAGTACTGCTTGGCGAA GTCAGATGGGAATGGGTCATAGGCATAAACTTCAGCGCCCAGAGCCTGCCACATCTTGCCTTCAACCGCC CCGATCTTGCCGGCCCCGTAGATGCCGACCTTCAAACGGTTGAATTCCGTAGCGAAGTAGTCCGGATGCA TCCCAAAGTCATGTTCATGGACATGATGGGCAGCTTCACCAACGTGTCTTGACAAAGTCAAACCCAGGGT AAAGGCCAGGTTGGCTACCGCGTATGGGGAGTAGTTTGACACCCGGGCAACGGAGATGCCCAAGTCCTTA GCGGCTTCCAGGTCGAAGTGGTCCACGCCGACTGACCGGGTGAAGACCCAGGAGATCCCGTAGTTCTTAA ACTGTTCCAGGTTTGTCCGGTCACAGAGGCAGTTGCCCCGGACCAGGACGGCGTCGCAGTCTTCTGCTTG TACTACGTTTTCCCGGTTCAAGTATTCAGGAATGAGCTTCAAGTCGTAGTCATACTTGTTCAGTTTTTCA AAATAACTTCTTTCAAGCGGCCTAACGCCGTAACATGCAATTCTCATCTTGAATACCTTCTTTTCTAGTA CTTCACTTTATTTCTTTCAATAATTGCCCCTATTTTATTTAATTCCTTTCTCATTTTCAACCCTTTCCTT CAACTTCTTAACTATTTAATTTTCTCCCGCCTTTCCAGGCCAAGTAAGGGCTGACAGACTTTGCTTTCCG TAAATCCTTCCCTTAAAAGTCCAGCTTTTGCTTTTAATCTACAGGCCAAAAAGGCAAAGAAAAACGCCCC TGAGGCGGGTGCCTCAAGGACGCTGATTTGATCATTTTGAAGTTTGCTAATTAGATAACCCGCTTGGCAG CTGATGGCCAGAAGTAGGAGCTCAGGTATTGCTTACGGACACCCTGGCTTGGCGTAGCGGCGTGCACGTA TTGGCCGCCCCCAACGTAGATGCCCACGTGGTATGGGGAGGACTTGGAACCCCAGAAGAGGAGGTCACCC TTCTTCAAGCTGACAGTTGAAACCTTAACAGTCTTGCCTTGGTAAACTTGGCTGTAAGTAGTCCGGCTGA TGTACTTGCCAATGGCGTGGCTGTAGACGTATGAAGTCAAGCCTGAGCAGTCAAAGGCGTTAGGACCGGT TGCCCCGTAAACGTAAGGCTTGCCGACTTGCTTCTTGGCCAGGGAGACGACCTTGTTGCGCTGGCTGGTC TTAGAAGCAGCTTGGACAGTGTTGTTTTGAGTGTTAACAGTATTTACGGCAACAAAACCGGCGAAGGCCA GGGATACGGCTGCGACTACTTTGGCTAATGACTTCTTGAACTTCAAAATGATTTACTTCCTTTCCTTAAC TTGATGTTTTTCTTAACTTGATGTTTAACATCTTACAGGATAAATATTTCAATTCTGTTTCAAAAAAGTC ACGCCTTTTTTACAATCTATGAGGAAAAGCTTAATTTTGTAATTTTCTCACCAAACTGTCCAAGCTGGCA TAGGTCGCTTGCAGGTCGTCATTGACCAGGACATGGGCGCAAGAAGCCAAATCTTCCGGCAATTCGTTCA ACTCGCTGCCGGTCAGCCGATTCTTGATCTGGTCACTTGCATCACCCCGGTCAGCCATTCTTTGCGCCAA GGTATCCAGGCTGCAAGTCACATAAAGGAAGTAAACCTGGTCACCTAAAGCTTCCAGGTAGGACCGGGCT CCCTTGATGTCCACGATCAAGCTGACCAGGTCGTTCTTGGCCCAGGCTCTTTCCAGCCCTTCTTTACTGG ACCCGTACTGGTAGTCCCCGTATTTGACATGTTCAAAGAAGTGCAGTTGGGCAAAAGAATCATCGTCTTC AAAATAATAGGCTGACCCGCTTTCCCCAGACCGCTTTGGCCGGGTGGTATGGGTAATCACCCGGGGGATC TGGTAGCGGTCGGTCAGGTATTCAGATATAGTCGTCTTGCCCGCCCCGCTGGGACCGGCAATCAAGATAA TTTTTTTAGCCAA
Region Details
| Region | 2 |
| Region Length | 7Kb |
| Completeness(score) | incomplete(40) |
| Specific Keyword | tail,transposase |
| Region Position | 1682697-1689709 |
| # tRNA | 0 |
| # Total Proteins | 11 |
| # Phage Hit Proteins | 8 |
| # Hypothetical Proteins | 0 |
| Phage + Hypothetical Protein % | 72.7% |
| # Bacterial Proteins | 3 |
| Attachment Site | no |
| # Phage Species | 5 |
| Most Common Phage Name(hit genes count) | PHAGE_Bacill_vB_BanS_Tsamsa_NC_023007(1) PHAGE_Staphy_StauST398_4_NC_023499(1) PHAGE_Clostr_phiCDHM19_NC_028996(1) PHAGE_Bacill_SPO1_NC_011421(1) PHAGE_Staphy_vB_SepS_SEP9_NC_023582(1) PHAGE_Lactoc_949_NC_015263(1) PHAGE_Clostr_CDMH1_NC_024144(1) PHAGE_Clostr_phiCDHM13_NC_029116(1) PHAGE_Staphy_phiPV83_NC_002486(1) PHAGE_Bacill_CampHawk_NC_022761(1) PHAGE_Clostr_phiCDHM11_NC_029001(1) PHAGE_Lactoc_phiL47_NC_023574(1) PHAGE_Clostr_phiCD506_NC_028838(1) PHAGE_Lactoc_WRP3_NC_027341(1) PHAGE_Clostr_phiCD481_1_NC_028951(1) |
| First Most Common Phage # | 4 |
| First Most Common Phage % | 9.09% |
| GC % | 48.82% |
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| # tRNA: | The number of tRNA genes present in the region. |
| # Total Proteins: | The number of ORFs present in the region. |
| # Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
| # Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
| Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
| # Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
| Attachment Site: | The putative phage attachment site. |
| # Phage Species: | The number of different phages that have similar proteins to those in the region. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
| First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
| GC %: | The percentage of GC nucleotides of the region. |
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Questionable (score 70-90)
Incomplete (score < 70)
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Score: | The score of the region based on the above criteria. |
| # Total Proteins: | The number of ORFs present in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| GC %: | The percentage of GC nucleotides of the region. |
Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
- If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
- If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
- If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
- If the size of the region is greater than 30 Kb, the score will be increased by 10.
- If there are at least 40 proteins in the region, the score will be increased by 10.
- If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
gi|00000000|ref|CR954253.1| Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 complete 1864998, gc%: 49.72%
Download details as .txt file: detail.txt file_download
Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File
Hits against Bacterial Database or GenBank File
Region 1, total 14 CDS
| # | CDS Position | BLAST Hit | E-Value | Sequence |
|---|---|---|---|---|
| 1 | 974293..976020 | PHAGE_Bacill_SPbeta_NC_001884: ABC transporter; Ldb1149; phage(gi9630145) | 2.81e-29 | Showinfo_outline |
| 2 | 976020..977777 | PHAGE_Bacill_SPbeta_NC_001884: ABC transporter; Ldb1150; phage(gi9630145) | 1.16e-22 | Showinfo_outline |
| 3 | complement(977860..978168) | Conserved hypothetical protein; Ldb1151 | 0.0 | Showinfo_outline |
| 4 | complement(978217..978612) | PHAGE_Pseudo_201phi2_1_NC_010821: putative RnhA; Ldb1152; phage(gi189490395) | 1.91e-10 | Showinfo_outline |
| 5 | complement(978609..979283) | PHAGE_Clostr_c_st_NC_007581: putative IS transposase (OrfA); Ldb1153; phage(gi80159862) | 1.37e-34 | Showinfo_outline |
| 6 | complement(979280..979378) | Integrase/resolvase (fragment); Ldb1154 | 0.0 | Showinfo_outline |
| 7 | complement(979766..980260) | PHAGE_Pectob_My1_NC_018837: putative ribonuclease H; Ldb1155; phage(gi410491117) | 2.75e-15 | Showinfo_outline |
| 8 | complement(980458..980940) | Hypothetical protein; Ldb1156 | 0.0 | Showinfo_outline |
| 9 | complement(981147..981413) | Putative acetyltransferase; Ldb1157 | 0.0 | Showinfo_outline |
| 10 | complement(981415..982134) | PHAGE_Synech_S_CAM9_NC_031922: baseplate wedge subunit and tail pin; Ldb1158; phage(gi100182) | 1.44e-07 | Showinfo_outline |
| 11 | 982286..982474 | Hypothetical protein; Ldb1159 | 0.0 | Showinfo_outline |
| 12 | complement(983004..983174) | Hypothetical protein; Ldb1160 | 0.0 | Showinfo_outline |
| 13 | complement(983205..983675) | Conserved hypothetical protein; Ldb1161 | 0.0 | Showinfo_outline |
| 14 | complement(984124..984909) | PHAGE_Clostr_phiCDHM11_NC_029001: hypothetical protein; Ldb1162; phage(gi971764697) | 6.09e-23 | Showinfo_outline |
Sequence
>974293..976020
LactobacillusdelbrueckiisubspbulgaricusATCC11842JCM1002MKILLPYFKRYKKDVFLTLITIVFSAFATLYQPRLLQQVQNELLADQQQAVIRDTAILIGLGLLSIITGVLNVYYASRITQGVVSDLREDTYAKIQTFSLANVQQFSSESLSVRLINDMQQIMNMIMTIFMQLIRMPLILIGSIIMAIVTIPRYWWAVVVLLALIMGLGVVAVKQITTMFDKFQMYMDKISGRTGEFLQGVRVVKSFNQSPQEIAKLNKDSDELNEVNIKVGYWFSTILPGAQLISYLVISLVVYLIGTSILQHPQDVSVITPYVNYVLTMLFAILLVGMAVMQISRGNVSLRRIQEIMDTQPDVVFNEKAPEDALGGSIEFDDVSFTYPDGQQPVLKHISFAVAPGQMVGIVGATGSGKSTLAQLIARLYDPTTGKIKIGGSDLRQVNENALRKTVSYVLQKAVLFSGTIADNLRQGKKDATSYELERAAQMAQASEFIQRYDETFDHEVEERSANFSGGQKQRLSIARGIIAGSPILILDDSTSALDAESEKLIQEALEKQLPDTTTIMIAEKIVSVMHADKILVLDNGRLVAEGTHEELLKTSPVYQEIYKTQKAKERKEEL
Sequence
>976020..977777
LactobacillusdelbrueckiisubspbulgaricusATCC11842JCM1002MSDKQKSLTYLTKYLKNYKKPILISIAFYLIATIAQVIAPSLLGQAVTDLSAFVKGQGSLGVFYQALAWMAGFYAFNSVATYIAWMMMTRFNANANNDMRKGLFGKLQRMTFRYFDTHQDGQILSLFNSDLDNIFNALNNAFFEIISQSLLFVGTIIVMFVINWKLALSVVATTPLILLLSWIIIKKARVYLDNQQDRVGELNAYINEQLNGENVIITQGLRDQSVAGFKKENAKVREAMFKGQFYSGILNPLVTGFSLLNFAIVIATGAYMIMTKQVSKAAGLGLIVTFTEYSWTYFQPLTQVTSIYSMLQLALTGARRLETVEEQEEENTVPDGKTISGVNDAVRLEDVHFGYTPDKEILHGVSIEVPKGQSVAVVGPTGSGKTTIMNLINRFYDVNSGAVTFDGTDVRDLKLENLRSNVGIVLQDSVLFSGTVADNIRYGKPDATMDEVIAAAKEAQLHDFVMTLPEQYDTPIENGQANFSTGQKQLLSIARTILVDPAFLILDEATSNVDTVTEEKIQKAMDNVIAGRTSFVIAHRLKTILNSDKIVVLKDGQVIEEGPHADLIKKRGFYYKLYTSQMAFE
Sequence
>complement(977860..978168)
LactobacillusdelbrueckiisubspbulgaricusATCC11842JCM1002MGLFQANDVNAGVEEYQKTLQAKLIDVREEDEYAAGHIPASINIPLSSIEAAREEITDLDTPLFVYCRSGNRSGHAVTWLKQAGYSKVQNIGGIANYSGKTE
Sequence
>complement(978217..978612)
LactobacillusdelbrueckiisubspbulgaricusATCC11842JCM1002MIEHDGKQLADSAGRLGATNNEMEMTAFLESLKKLEQLGLTQQPLLFVLNSQYVIKSVSYTKDGPAWMKSWKKRDWKTANGKPVANQELWQDIDRELDKFDSSKLKFAWLRSTVSDAGSDFVDSMLIKAHG
Sequence
>complement(978609..979283)
LactobacillusdelbrueckiisubspbulgaricusATCC11842JCM1002MSENMSDIGSGLNFNRPEWNQLLQKVEDREVNKIYVTHKDRFVRLAFDWFANFCKRHGSEIVVINNPATSPSQELVDDLVSIINLFSSRLPGLRRYKAEIKNDQELEAAEQVADTEVKQAEKAKKTYAVRKGRQPGIYYSWPEAEKQVNGFPGAEYKSFSRESDALNYLKLDPADPQNAVKQEPEYDKKDYSAVIYTGGACRRQHRHAQGRPMSKTAIRLLGPT
Sequence
>complement(979280..979378)
LactobacillusdelbrueckiisubspbulgaricusATCC11842JCM1002VIYARVSSAWTSDDLAKQENFLLDTVMPTALL
Sequence
>complement(979766..980260)
LactobacillusdelbrueckiisubspbulgaricusATCC11842JCM1002LNPNTMPGFLPTVAAATMKVNTFCQLTKAAWAYVILHDGHAMTATGGKVGATNNQMEMTAVLESLKALEDMGLSQKKLLLSLDSDYVRKALSDSSNGTAWIKGWKERGWRKSNGEAVANPDLWKEIDKEFSKFSDLTLQHVTGHANSDGNNLADALVNEQMDKM
Sequence
>complement(980458..980940)
LactobacillusdelbrueckiisubspbulgaricusATCC11842JCM1002MRSYVAFTGKDKYLSIFVNDSNEKIREIVAHQGRDEDLDILVHDPDWKVRAIVAECGRDKDLDILVKDKVASVRKAVAKQGRDRDLDVLVHDKIVSVRRGVAIFGRDKDLDILVHDKAISVRQSVAKHGRPKDLEILIKDDHVSVSYPAHIRYWKQQDDY
Sequence
>complement(981147..981413)
LactobacillusdelbrueckiisubspbulgaricusATCC11842JCM1002MEIKFEEEQKRAAVYDGGKLIGQCVYEDKGDHWIITTTKVDLAYGGQGLGRKLVDTVASAAREKGARLRATCSYAAKVLTKPGYEDLR
Sequence
>complement(981415..982134)
LactobacillusdelbrueckiisubspbulgaricusATCC11842JCM1002MKYKAAIFDMDGTILDTSADLTSALNYAFEQTGHRHDFTVEDIKNFFGSGVVVAVTRALAYEAGSSRESLVAFGTKDERIPEAVTQAEVNRVLEVFKPYYADHCQIKTCPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPGSFDFALGEKSGIRRKPAPDMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVDTAEKLEEAILGE
Sequence
>982286..982474
LactobacillusdelbrueckiisubspbulgaricusATCC11842JCM1002METVLLVASVVVVLLSLAVFVAVFVLVSFVVVAAVSLVVVEATSFVLAVICLLAEVIMLLFC
Sequence
>complement(983004..983174)
LactobacillusdelbrueckiisubspbulgaricusATCC11842JCM1002MEVLDENHDPIPGFYGFYGLYAAGNDAGGFFWGSYNDRQPATRTPLAVWLGNLLLD
Sequence
>complement(983205..983675)
LactobacillusdelbrueckiisubspbulgaricusATCC11842JCM1002MKVKVKLNKDQDLPLAVIYTDKMTEEVERAVAFLESSASSGPLIAQQEDRLVIIKPSDAILVRVEGGDTVIYTGKGKYFSRKRLYEVYQQLGQDFMQISKQAVVNLTCLESVEASFNGTMFLRLEHGLSDYIKEAYRITPIKKKPYYGCVLGGRIL
Sequence
>complement(984124..984909)
LactobacillusdelbrueckiisubspbulgaricusATCC11842JCM1002MDSKLHDYTVFDLETTGKKIIQIGALKVRDDQTVAKFSTYVNPLEKINDYVSHLTGISNYQTDAAPLIDEVMPDFLDFVGDDTLVGHNILSFDCNVLADNGYPVANPKLDTLLLANSYKKRGLFADPIPNVRLSTLKEYYGININFHIAISDCITNNIVYQKLLDGDLAKATEIIDFTPKQVDSRLAGQRFVITGQFRQATRYELTSLIQSHGGKVTGSVSGVTDYLLKGELDHVTGKCKKAAEKGTAVIGYEDLMLLLQK
Region 2, total 11 CDS
| # | CDS Position | BLAST Hit | E-Value | Sequence |
|---|---|---|---|---|
| 1 | complement(1682697..1683476) | PHAGE_Bacill_CampHawk_NC_022761: tail protein; Ldb2013; phage(gi557478849) | 3.83e-09 | Showinfo_outline |
| 2 | complement(1683522..1684124) | PHAGE_Clostr_phiCDHM11_NC_029001: putative cell wall hydrolase protein; Ldb2014; phage(gi971764678) | 1.92e-20 | Showinfo_outline |
| 3 | complement(1684378..1685127) | PHAGE_Clostr_phiCDHM11_NC_029001: putative cell wall hydrolase protein; Ldb2015; phage(gi971764678) | 5.52e-18 | Showinfo_outline |
| 4 | complement(1685324..1685443) | Transposase (fragment); Ldb2016 | 0.0 | Showinfo_outline |
| 5 | complement(1685455..1685724) | PHAGE_Staphy_StauST398_4_NC_023499: putative transposase; Ldb2017; phage(gi588498272) | 1.15e-07 | Showinfo_outline |
| 6 | complement(1685721..1686179) | PHAGE_Staphy_phiPV83_NC_002486: transposase; Ldb2018; phage(gi9635740) | 1.12e-08 | Showinfo_outline |
| 7 | complement(1686279..1686356) | Transposase (fragment); Ldb2019 | 0.0 | Showinfo_outline |
| 8 | complement(1686583..1687056) | PHAGE_Clostr_phiCDHM11_NC_029001: putative cell wall hydrolase protein; Ldb2020; phage(gi971764678) | 3.27e-18 | Showinfo_outline |
| 9 | complement(1687227..1688273) | D-isomer specific 2-hydroxyacid dehydrogenase; Ldb2021 | 0.0 | Showinfo_outline |
| 10 | complement(1688557..1689042) | PHAGE_Clostr_phiCDHM11_NC_029001: putative cell wall hydrolase protein; Ldb2022; phage(gi971764678) | 1.16e-16 | Showinfo_outline |
| 11 | complement(1689167..1689709) | PHAGE_Lactoc_phiL47_NC_023574: guanylate kinase; Ldb2023; phage(gi589890900) | 1.20e-16 | Showinfo_outline |
Sequence
>complement(1682697..1683476)
LactobacillusdelbrueckiisubspbulgaricusATCC11842JCM1002MKKSNMIKFFAAALTFLGISATGVKPVKQPVQAASKRIKVISKQSVTVWTNYQKGRHVATHLKKGSSHFVYQTATDSMGNLWYRIGKKEWVMAKYFNQVKSAKKAVKAKKTKVKSKKTVKKARSAASLAASWSAPMGSKARAKAVVSLAKQQVGKAYVKGSKGPNAFDNASLVAYVYKQAAGVNTGSSTKSQVKKGIAVDPSSGFAEGDLLFWGSKNKPYNVAIYVGDGKYVTAAGDQQGVVQASLSTYFWPSRARRVL
Sequence
>complement(1683522..1684124)
LactobacillusdelbrueckiisubspbulgaricusATCC11842JCM1002VKKTRVAYNKGNKVNTWTTYGAGKKLVGQVKSGYKFTATGQAQYKGRAWYRIKDNKWILGTNTVTTKKYASIKAKAAKAAKQKKVVALANAQVGKAYVWGATGPSSFDCSGLVQWVYKTAIGQTVSRTTYTQVKEGVAVPVSTASLQPGDLLFWGDVAAPYHVAIYVGNGQYVSAADEQQGVILATISSYFWPTTARRIL
Sequence
>complement(1684378..1685127)
LactobacillusdelbrueckiisubspbulgaricusATCC11842JCM1002MALALVAPVAASAQAPAAQAATVKAVNRQVVVNYVSGYSVKAWKNYKVKLGAANDTGISFKHGTTLTVVGEVKYKKRTWYKIADNEWILASYTLSPKAWAKKAAAAKKAAAKAAKKAAAAKKVSKSKQTKQNKVVALAKAQVGKPYVWGATGPYSFDCSGLTSYVYSLALGKYITRTTYTQVHQGKTVAVSTATLKKGDLLFWGSKSSPYHVGIYVGGGKFVHAATPSQGVIKQSLSYYFWPSTAKRLI
Sequence
>complement(1685324..1685443)
LactobacillusdelbrueckiisubspbulgaricusATCC11842JCM1002VEDIAKIEVWCNSLPRKILNYKTPEEYFDTELDRIYRRR
Sequence
>complement(1685455..1685724)
LactobacillusdelbrueckiisubspbulgaricusATCC11842JCM1002MIKIEDKTSASVMKAFDKLREYYGSKWNQIFKSITTDNGSEFADLSDLEQVSKTLVYYAHPYTSCDKGSVERHNGLIRRYIPKGDRMDK
Sequence
>complement(1685721..1686179)
LactobacillusdelbrueckiisubspbulgaricusATCC11842JCM1002VYRYKAVEGQSTYEPHRSECGRKSLFLRRHKFIDYVSHCFHNHGWSLDACVGYALAKGIFQKDQVVSTKTLYNYVDLGLMDIKNGDLPEKVKRNTKTRRARVNKRILGRSIDERSPRIESRKDFGHWERDLVLGHKTKDDDVFANERRVSSS
Sequence
>complement(1686279..1686356)
LactobacillusdelbrueckiisubspbulgaricusATCC11842JCM1002MDHSYSNTKPHQKGKRLKLNDRTTI
Sequence
>complement(1686583..1687056)
LactobacillusdelbrueckiisubspbulgaricusATCC11842JCM1002MKQFKQILVKLTLALALVVPIAVQENSHQAQAASVTTKRNKVVKLAKKQVGKRYVYGATGPNAFDCSGLTSYVYSHAIGKYISRTTYSQVYRGKTVKVSTASLKKGDLLFWGSKSSPYHVGIYVGGGQYVHAATPSQGVRKQYLSSYFWPSTAKRVI
Sequence
>complement(1687227..1688273)
LactobacillusdelbrueckiisubspbulgaricusATCC11842JCM1002MRIACYGVRPLERSYFEKLNKYDYDLKLIPEYLNRENVVQAEDCDAVLVRGNCLCDRTNLEQFKNYGISWVFTRSVGVDHFDLEAAKDLGISVARVSNYSPYAVANLAFTLGLTLSRHVGEAAHHVHEHDFGMHPDYFATEFNRLKVGIYGAGKIGAVEGKMWQALGAEVYAYDPFPSDFAKQYCTFVTEDELLATCDIVSVHVPYFPGENDKLMNAEFIAKMKEGAVLVNTARGELADEAAIAAAVSSNHLSGYGADVVSNEKKIMGHNFDCESDVPDQEVQSLMDLYPRVLLTPHMGSFTEPALEDMISLSFNNFHNMATEGAVDARNEVVAAPESSTSASEKLRA
Sequence
>complement(1688557..1689042)
LactobacillusdelbrueckiisubspbulgaricusATCC11842JCM1002MKFKKSLAKVVAAVSLAFAGFVAVNTVNTQNNTVQAASKTSQRNKVVSLAKKQVGKPYVYGATGPNAFDCSGLTSYVYSHAIGKYISRTTYSQVYQGKTVKVSTVSLKKGDLLFWGSKSSPYHVGIYVGGGQYVHAATPSQGVRKQYLSSYFWPSAAKRVI
Sequence
>complement(1689167..1689709)
LactobacillusdelbrueckiisubspbulgaricusATCC11842JCM1002MAKKIILIAGPSGAGKTTISEYLTDRYQIPRVITHTTRPKRSGESGSAYYFEDDDSFAQLHFFEHVKYGDYQYGSSKEGLERAWAKNDLVSLIVDIKGARSYLEALGDQVYFLYVTCSLDTLAQRMADRGDASDQIKNRLTGSELNELPEDLASCAHVLVNDDLQATYASLDSLVRKLQN
Lactobacillus delbrueckii subsp
Click on a region to see details.
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
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Questionable (score 70-90)
Incomplete (score < 70)
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Length: 1864998 bps
Phages: 2
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Click on a region in the genome above to show details here.
Click on a region in the genome above to show details here.
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Click on a sequence to see details.
Locus 1: Ldb1149 (Region 1)
Locus: Ldb1149ORF Start: 974293
ORF Stop: 976020
Strand: Forward
Protein Sequence: MKILLPYFKRYKKDVFLTLITIVFSAFATLYQPRLLQQVQNELLADQQQAVIRDTAILIGLGLLSIITGVLNVYYASRITQGVVSDLREDTYAKIQTFSLANVQQFSSESLSVRLINDMQQIMNMIMTIFMQLIRMPLILIGSIIMAIVTIPRYWWAVVVLLALIMGLGVVAVKQITTMFDKFQMYMDKISGRTGEFLQGVRVVKSFNQSPQEIAKLNKDSDELNEVNIKVGYWFSTILPGAQLISYLVISLVVYLIGTSILQHPQDVSVITPYVNYVLTMLFAILLVGMAVMQISRGNVSLRRIQEIMDTQPDVVFNEKAPEDALGGSIEFDDVSFTYPDGQQPVLKHISFAVAPGQMVGIVGATGSGKSTLAQLIARLYDPTTGKIKIGGSDLRQVNENALRKTVSYVLQKAVLFSGTIADNLRQGKKDATSYELERAAQMAQASEFIQRYDETFDHEVEERSANFSGGQKQRLSIARGIIAGSPILILDDSTSALDAESEKLIQEALEKQLPDTTTIMIAEKIVSVMHADKILVLDNGRLVAEGTHEELLKTSPVYQEIYKTQKAKERKEEL
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: Ldb1149, ABC transporter, phage(gi9630145), PHAGE_Bacill_SPbeta_NC_001884
Homolog/Ortholog E-Value: 2.81e-29
Locus 2: Ldb1150 (Region 1)
Locus: Ldb1150ORF Start: 976020
ORF Stop: 977777
Strand: Forward
Protein Sequence: MSDKQKSLTYLTKYLKNYKKPILISIAFYLIATIAQVIAPSLLGQAVTDLSAFVKGQGSLGVFYQALAWMAGFYAFNSVATYIAWMMMTRFNANANNDMRKGLFGKLQRMTFRYFDTHQDGQILSLFNSDLDNIFNALNNAFFEIISQSLLFVGTIIVMFVINWKLALSVVATTPLILLLSWIIIKKARVYLDNQQDRVGELNAYINEQLNGENVIITQGLRDQSVAGFKKENAKVREAMFKGQFYSGILNPLVTGFSLLNFAIVIATGAYMIMTKQVSKAAGLGLIVTFTEYSWTYFQPLTQVTSIYSMLQLALTGARRLETVEEQEEENTVPDGKTISGVNDAVRLEDVHFGYTPDKEILHGVSIEVPKGQSVAVVGPTGSGKTTIMNLINRFYDVNSGAVTFDGTDVRDLKLENLRSNVGIVLQDSVLFSGTVADNIRYGKPDATMDEVIAAAKEAQLHDFVMTLPEQYDTPIENGQANFSTGQKQLLSIARTILVDPAFLILDEATSNVDTVTEEKIQKAMDNVIAGRTSFVIAHRLKTILNSDKIVVLKDGQVIEEGPHADLIKKRGFYYKLYTSQMAFE
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: Ldb1150, ABC transporter, phage(gi9630145), PHAGE_Bacill_SPbeta_NC_001884
Homolog/Ortholog E-Value: 1.16e-22
Locus 3: Ldb1151 (Region 1)
Locus: Ldb1151ORF Start: 977860
ORF Stop: 978168
Strand: Backward
Protein Sequence: MGLFQANDVNAGVEEYQKTLQAKLIDVREEDEYAAGHIPASINIPLSSIEAAREEITDLDTPLFVYCRSGNRSGHAVTWLKQAGYSKVQNIGGIANYSGKTE
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: Ldb1151, Conserved hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 4: Ldb1152 (Region 1)
Locus: Ldb1152ORF Start: 978217
ORF Stop: 978612
Strand: Backward
Protein Sequence: MIEHDGKQLADSAGRLGATNNEMEMTAFLESLKKLEQLGLTQQPLLFVLNSQYVIKSVSYTKDGPAWMKSWKKRDWKTANGKPVANQELWQDIDRELDKFDSSKLKFAWLRSTVSDAGSDFVDSMLIKAHG
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: Ldb1152, putative RnhA, phage(gi189490395), PHAGE_Pseudo_201phi2_1_NC_010821
Homolog/Ortholog E-Value: 1.91e-10
Locus 5: Ldb1153 (Region 1)
Locus: Ldb1153ORF Start: 978609
ORF Stop: 979283
Strand: Backward
Protein Sequence: MSENMSDIGSGLNFNRPEWNQLLQKVEDREVNKIYVTHKDRFVRLAFDWFANFCKRHGSEIVVINNPATSPSQELVDDLVSIINLFSSRLPGLRRYKAEIKNDQELEAAEQVADTEVKQAEKAKKTYAVRKGRQPGIYYSWPEAEKQVNGFPGAEYKSFSRESDALNYLKLDPADPQNAVKQEPEYDKKDYSAVIYTGGACRRQHRHAQGRPMSKTAIRLLGPT
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: Ldb1153, putative IS transposase (OrfA), phage(gi80159862), PHAGE_Clostr_c_st_NC_007581
Homolog/Ortholog E-Value: 1.37e-34
Locus 6: Ldb1154 (Region 1)
Locus: Ldb1154ORF Start: 979280
ORF Stop: 979378
Strand: Backward
Protein Sequence: VIYARVSSAWTSDDLAKQENFLLDTVMPTALL
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: Ldb1154, Integrase/resolvase (fragment)
Homolog/Ortholog E-Value: N/A
Locus 7: Ldb1155 (Region 1)
Locus: Ldb1155ORF Start: 979766
ORF Stop: 980260
Strand: Backward
Protein Sequence: LNPNTMPGFLPTVAAATMKVNTFCQLTKAAWAYVILHDGHAMTATGGKVGATNNQMEMTAVLESLKALEDMGLSQKKLLLSLDSDYVRKALSDSSNGTAWIKGWKERGWRKSNGEAVANPDLWKEIDKEFSKFSDLTLQHVTGHANSDGNNLADALVNEQMDKM
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: Ldb1155, putative ribonuclease H, phage(gi410491117), PHAGE_Pectob_My1_NC_018837
Homolog/Ortholog E-Value: 2.75e-15
Locus 8: Ldb1156 (Region 1)
Locus: Ldb1156ORF Start: 980458
ORF Stop: 980940
Strand: Backward
Protein Sequence: MRSYVAFTGKDKYLSIFVNDSNEKIREIVAHQGRDEDLDILVHDPDWKVRAIVAECGRDKDLDILVKDKVASVRKAVAKQGRDRDLDVLVHDKIVSVRRGVAIFGRDKDLDILVHDKAISVRQSVAKHGRPKDLEILIKDDHVSVSYPAHIRYWKQQDDY
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: Ldb1156, Hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 9: Ldb1157 (Region 1)
Locus: Ldb1157ORF Start: 981147
ORF Stop: 981413
Strand: Backward
Protein Sequence: MEIKFEEEQKRAAVYDGGKLIGQCVYEDKGDHWIITTTKVDLAYGGQGLGRKLVDTVASAAREKGARLRATCSYAAKVLTKPGYEDLR
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: Ldb1157, Putative acetyltransferase
Homolog/Ortholog E-Value: N/A
Locus 10: Ldb1158 (Region 1)
Locus: Ldb1158ORF Start: 981415
ORF Stop: 982134
Strand: Backward
Protein Sequence: MKYKAAIFDMDGTILDTSADLTSALNYAFEQTGHRHDFTVEDIKNFFGSGVVVAVTRALAYEAGSSRESLVAFGTKDERIPEAVTQAEVNRVLEVFKPYYADHCQIKTCPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPGSFDFALGEKSGIRRKPAPDMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVDTAEKLEEAILGE
Homolog/Ortholog Species: Tail protein
Homolog/Ortholog Protein: Ldb1158, baseplate wedge subunit and tail pin, phage(gi100182), PHAGE_Synech_S_CAM9_NC_031922
Homolog/Ortholog E-Value: 1.44e-07
Locus 11: Ldb1159 (Region 1)
Locus: Ldb1159ORF Start: 982286
ORF Stop: 982474
Strand: Forward
Protein Sequence: METVLLVASVVVVLLSLAVFVAVFVLVSFVVVAAVSLVVVEATSFVLAVICLLAEVIMLLFC
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: Ldb1159, Hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 12: Ldb1160 (Region 1)
Locus: Ldb1160ORF Start: 983004
ORF Stop: 983174
Strand: Backward
Protein Sequence: MEVLDENHDPIPGFYGFYGLYAAGNDAGGFFWGSYNDRQPATRTPLAVWLGNLLLD
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: Ldb1160, Hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 13: Ldb1161 (Region 1)
Locus: Ldb1161ORF Start: 983205
ORF Stop: 983675
Strand: Backward
Protein Sequence: MKVKVKLNKDQDLPLAVIYTDKMTEEVERAVAFLESSASSGPLIAQQEDRLVIIKPSDAILVRVEGGDTVIYTGKGKYFSRKRLYEVYQQLGQDFMQISKQAVVNLTCLESVEASFNGTMFLRLEHGLSDYIKEAYRITPIKKKPYYGCVLGGRIL
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: Ldb1161, Conserved hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 14: Ldb1162 (Region 1)
Locus: Ldb1162ORF Start: 984124
ORF Stop: 984909
Strand: Backward
Protein Sequence: MDSKLHDYTVFDLETTGKKIIQIGALKVRDDQTVAKFSTYVNPLEKINDYVSHLTGISNYQTDAAPLIDEVMPDFLDFVGDDTLVGHNILSFDCNVLADNGYPVANPKLDTLLLANSYKKRGLFADPIPNVRLSTLKEYYGININFHIAISDCITNNIVYQKLLDGDLAKATEIIDFTPKQVDSRLAGQRFVITGQFRQATRYELTSLIQSHGGKVTGSVSGVTDYLLKGELDHVTGKCKKAAEKGTAVIGYEDLMLLLQK
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: Ldb1162, hypothetical protein, phage(gi971764697), PHAGE_Clostr_phiCDHM11_NC_029001
Homolog/Ortholog E-Value: 6.09e-23
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Click on a sequence to see details.
Locus 1: Ldb2013 (Region 2)
Locus: Ldb2013ORF Start: 1682697
ORF Stop: 1683476
Strand: Backward
Protein Sequence: MKKSNMIKFFAAALTFLGISATGVKPVKQPVQAASKRIKVISKQSVTVWTNYQKGRHVATHLKKGSSHFVYQTATDSMGNLWYRIGKKEWVMAKYFNQVKSAKKAVKAKKTKVKSKKTVKKARSAASLAASWSAPMGSKARAKAVVSLAKQQVGKAYVKGSKGPNAFDNASLVAYVYKQAAGVNTGSSTKSQVKKGIAVDPSSGFAEGDLLFWGSKNKPYNVAIYVGDGKYVTAAGDQQGVVQASLSTYFWPSRARRVL
Homolog/Ortholog Species: Tail protein
Homolog/Ortholog Protein: Ldb2013, tail protein, phage(gi557478849), PHAGE_Bacill_CampHawk_NC_022761
Homolog/Ortholog E-Value: 3.83e-09
Locus 2: Ldb2014 (Region 2)
Locus: Ldb2014ORF Start: 1683522
ORF Stop: 1684124
Strand: Backward
Protein Sequence: VKKTRVAYNKGNKVNTWTTYGAGKKLVGQVKSGYKFTATGQAQYKGRAWYRIKDNKWILGTNTVTTKKYASIKAKAAKAAKQKKVVALANAQVGKAYVWGATGPSSFDCSGLVQWVYKTAIGQTVSRTTYTQVKEGVAVPVSTASLQPGDLLFWGDVAAPYHVAIYVGNGQYVSAADEQQGVILATISSYFWPTTARRIL
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: Ldb2014, putative cell wall hydrolase protein, phage(gi971764678), PHAGE_Clostr_phiCDHM11_NC_029001
Homolog/Ortholog E-Value: 1.92e-20
Locus 3: Ldb2015 (Region 2)
Locus: Ldb2015ORF Start: 1684378
ORF Stop: 1685127
Strand: Backward
Protein Sequence: MALALVAPVAASAQAPAAQAATVKAVNRQVVVNYVSGYSVKAWKNYKVKLGAANDTGISFKHGTTLTVVGEVKYKKRTWYKIADNEWILASYTLSPKAWAKKAAAAKKAAAKAAKKAAAAKKVSKSKQTKQNKVVALAKAQVGKPYVWGATGPYSFDCSGLTSYVYSLALGKYITRTTYTQVHQGKTVAVSTATLKKGDLLFWGSKSSPYHVGIYVGGGKFVHAATPSQGVIKQSLSYYFWPSTAKRLI
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: Ldb2015, putative cell wall hydrolase protein, phage(gi971764678), PHAGE_Clostr_phiCDHM11_NC_029001
Homolog/Ortholog E-Value: 5.52e-18
Locus 4: Ldb2016 (Region 2)
Locus: Ldb2016ORF Start: 1685324
ORF Stop: 1685443
Strand: Backward
Protein Sequence: VEDIAKIEVWCNSLPRKILNYKTPEEYFDTELDRIYRRR
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: Ldb2016, Transposase (fragment)
Homolog/Ortholog E-Value: N/A
Locus 5: Ldb2017 (Region 2)
Locus: Ldb2017ORF Start: 1685455
ORF Stop: 1685724
Strand: Backward
Protein Sequence: MIKIEDKTSASVMKAFDKLREYYGSKWNQIFKSITTDNGSEFADLSDLEQVSKTLVYYAHPYTSCDKGSVERHNGLIRRYIPKGDRMDK
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: Ldb2017, putative transposase, phage(gi588498272), PHAGE_Staphy_StauST398_4_NC_023499
Homolog/Ortholog E-Value: 1.15e-07
Locus 6: Ldb2018 (Region 2)
Locus: Ldb2018ORF Start: 1685721
ORF Stop: 1686179
Strand: Backward
Protein Sequence: VYRYKAVEGQSTYEPHRSECGRKSLFLRRHKFIDYVSHCFHNHGWSLDACVGYALAKGIFQKDQVVSTKTLYNYVDLGLMDIKNGDLPEKVKRNTKTRRARVNKRILGRSIDERSPRIESRKDFGHWERDLVLGHKTKDDDVFANERRVSSS
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: Ldb2018, transposase, phage(gi9635740), PHAGE_Staphy_phiPV83_NC_002486
Homolog/Ortholog E-Value: 1.12e-08
Locus 7: Ldb2019 (Region 2)
Locus: Ldb2019ORF Start: 1686279
ORF Stop: 1686356
Strand: Backward
Protein Sequence: MDHSYSNTKPHQKGKRLKLNDRTTI
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: Ldb2019, Transposase (fragment)
Homolog/Ortholog E-Value: N/A
Locus 8: Ldb2020 (Region 2)
Locus: Ldb2020ORF Start: 1686583
ORF Stop: 1687056
Strand: Backward
Protein Sequence: MKQFKQILVKLTLALALVVPIAVQENSHQAQAASVTTKRNKVVKLAKKQVGKRYVYGATGPNAFDCSGLTSYVYSHAIGKYISRTTYSQVYRGKTVKVSTASLKKGDLLFWGSKSSPYHVGIYVGGGQYVHAATPSQGVRKQYLSSYFWPSTAKRVI
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: Ldb2020, putative cell wall hydrolase protein, phage(gi971764678), PHAGE_Clostr_phiCDHM11_NC_029001
Homolog/Ortholog E-Value: 3.27e-18
Locus 9: Ldb2021 (Region 2)
Locus: Ldb2021ORF Start: 1687227
ORF Stop: 1688273
Strand: Backward
Protein Sequence: MRIACYGVRPLERSYFEKLNKYDYDLKLIPEYLNRENVVQAEDCDAVLVRGNCLCDRTNLEQFKNYGISWVFTRSVGVDHFDLEAAKDLGISVARVSNYSPYAVANLAFTLGLTLSRHVGEAAHHVHEHDFGMHPDYFATEFNRLKVGIYGAGKIGAVEGKMWQALGAEVYAYDPFPSDFAKQYCTFVTEDELLATCDIVSVHVPYFPGENDKLMNAEFIAKMKEGAVLVNTARGELADEAAIAAAVSSNHLSGYGADVVSNEKKIMGHNFDCESDVPDQEVQSLMDLYPRVLLTPHMGSFTEPALEDMISLSFNNFHNMATEGAVDARNEVVAAPESSTSASEKLRA
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: Ldb2021, D-isomer specific 2-hydroxyacid dehydrogenase
Homolog/Ortholog E-Value: N/A
Locus 10: Ldb2022 (Region 2)
Locus: Ldb2022ORF Start: 1688557
ORF Stop: 1689042
Strand: Backward
Protein Sequence: MKFKKSLAKVVAAVSLAFAGFVAVNTVNTQNNTVQAASKTSQRNKVVSLAKKQVGKPYVYGATGPNAFDCSGLTSYVYSHAIGKYISRTTYSQVYQGKTVKVSTVSLKKGDLLFWGSKSSPYHVGIYVGGGQYVHAATPSQGVRKQYLSSYFWPSAAKRVI
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: Ldb2022, putative cell wall hydrolase protein, phage(gi971764678), PHAGE_Clostr_phiCDHM11_NC_029001
Homolog/Ortholog E-Value: 1.16e-16
Locus 11: Ldb2023 (Region 2)
Locus: Ldb2023ORF Start: 1689167
ORF Stop: 1689709
Strand: Backward
Protein Sequence: MAKKIILIAGPSGAGKTTISEYLTDRYQIPRVITHTTRPKRSGESGSAYYFEDDDSFAQLHFFEHVKYGDYQYGSSKEGLERAWAKNDLVSLIVDIKGARSYLEALGDQVYFLYVTCSLDTLAQRMADRGDASDQIKNRLTGSELNELPEDLASCAHVLVNDDLQATYASLDSLVRKLQN
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: Ldb2023, guanylate kinase, phage(gi589890900), PHAGE_Lactoc_phiL47_NC_023574
Homolog/Ortholog E-Value: 1.20e-16
Lysis
Terminase
Portal Protein
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Other
Transposase
Fiber Protein
Plate Protein
tRNA
Plate Protein
tRNA
Download data as .txt file: png_input file_download