Submission Results
Sequence Name: Not Available
GenBank Accession Number: 1035427824
GenInfo (GI) Number: 0000000000
Download Results: 1035427824.PHASTER.zip
gi|00000000|ref|LT009689.1| Klebsiella pneumoniae plasmid pIT-12C73, strain 12C73, complete 106320, gc%: 52.84%
Download summary as .txt file: summary.txt file_download
Total: 1 prophage regions have been identified, of which 0 regions are intact, 1 regions are incomplete, and 0 regions are questionable.
| Region | Region Length | Completeness | Score | # Total Proteins | Region Position | Most Common Phage | GC % | Details |
|---|---|---|---|---|---|---|---|---|
| 1 | 15.6Kb | incomplete | 60 | 19 | 62568-78249 info_outline | PHAGE_Staphy_SPbeta_like_NC_029119(2) | 45.10% | Show info_outline |
Region DNA
>1 62568-78249 TTACATTTCAAAAACTCTGCTTACCAGGCGCATTTCGCCCAGGGGATCACCATAATAAAATGCTGAGGCC TGGCCTTTGCGTAGTGCACGCATCACCTCAATACCTTTGATGGTGGCGTAAGCCGTCTTCATGGATTTAA ATCCCAGCGTGGCGCCGATTATCCGTTTCAGTTTGCCATGATCGCATTCAATCACGTTGTTCCGGTACTT AATCTGTCGGTGTTCAACGTCAGACGGGCACCGGCCTTCGCGTTTGAGCAGAGCAAGCGCGCGACCATAG GCGGGCGCTTTATCCGTGTTGATGAATCGCGGGATCTGCCACTTCTTCACGTTGTTGAGGATTTTACCCA GAAACCGGTATGCAGCTTTGCTGTTACGACGGGAGGAGAGATAAAAATCGACAGTGCGGCCCCGGCTGTC GACGGCCCGGTACAGATACGCCCAGCGGCCATTGACCTTCACGTAGGTTTCATCCATGTGCCACGGGCAA AGATCGGAAGGGTTACGCCAGTACCAGCGCAGCCGTTTTTCCATTTCAGGCGCATAACGCTGAACCCAGC GGTAAATCGTGGAGTGATCGACATTCACTCCGCGTTCAGCCAGCATCTCCTGCAGCTCACGGTAACTGAT GCCGTATTTGCAGTACCAGCGTACGGCCCACAGAATGATGTCACGCTGAAAATGCCGGCCTTTGAATGGG TTCATGTGCAGCTCCATCAGCAAAAGGGGATGATAAGTTTATCACCACCGACTATTTGCAACAGTGCCCT TTGTCGCATTAACGCGAATCAGGGGTTGACGGCAGAAATGGACTGGAATTACACTTCTTAGAGTCGGCGT TGCCGGAAAATTCTGATTGGATTAGTTGTTCGGGGTGCGAAAACAGTCGTAGTTCGGGGGAAAAACCGAA TTTTGACCCGAAACCGCAAAAAACCCGAAATGACAGTTCCTATCAAATACTTAACTTGTAGGTTCTTTCA AATGGATAAGAATGATGTTGTTAAGAAGATACTTGAATCAAAAAAGTACGAAAACCTTGATTCAGATATT GTTGAAAAGGTTGTTTCCATTTCTGAGAAGAAATATAAATTAAAGGAAGTTGAGAATTATTCTAAAAAGA AATTGCATCAAATATGGGGGTCTTACTATTCTGCCTATCCTAATTGGGATAAATTATTAAAAAAGTACAA TCAGGGGCAGTTATCAATAGAAGATTTACTAAAGATTCATTCTTCGACGAATGAAAGAGTCGCAACATTA AATGACTTTTACACTTATGTATTTGGAAATATCAAACATGTCTCATCTATTTTAGATTTTGGTTGTGGCT TCAATCCATTAGCTTTATACCAATGGAATGAAAATGAAAAAATAATATATCATGCATACGATATTGATAG AGCTGAGATAGCTTTTTTGAGTAGCATTATTGGGAAGTTAAAGACGACGATAAAGTATAGGTTTTTGAAT AAAGAGAGTGATGTCTACAAAGGTACTTATGATGTAGTATTCCTTTTAAAGATGCTTCCTGTGCTAAAAC AGCAAGATGTAAATATCTTGGATTTCCTACAGCTTTTTCATACTCAAAACTTTGTAATATCTTTTCCAAT AAAGTCTTTATCTGGAAAGGAGAAGGGAATGGAAGAGAATTACCAGCTATGGTTTGAATCTTTTACAAAA GGTTGGATAAAAATCCTTGATTCGAAGGTTATAGGGAATGAGTTAGTATATATTACTAGTGGATTTCAGA AATAACTCCGCCTCCAAGGCACTCATTTTCTTGGAAAAGTACTAAACTCTGTCCAACGGCTGGAGCCCAT TGTGGTGCAGAAAATTCAAATATATATCCATTTTCATTCTGGGTTACTTTTACTGGTGTATCCTGACTTC TATAACGGATAGATGCTGTATAGTTATTATTAAGTAATGAAGTTTCGTTTATCAAGTGCAATTCTGAAAC ACTTACTATGTTTTTCCAAAGTTTTGGATTATCTTTTCCTTGGACAACATAGAGGATATTTTGAGGAAAA GATAGGTTTCAACTACAGTTTAGAAGGTTAAAAACAAATGCATGCATGGCTCAAAAGCAATCTAGGGAAG GTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTTTTCCTGTTTGAGCCGTTTTT TCTCCCGTAAATGCACTGTATACCGATATGGGCAGGGCGAAGCGCTAAAGTACAACAATCTTATTGTTAG CTATTGTCTTGGCGTTCCAGAAAATCTTTAAACTCAATAGTATAAAGCCGTAACAGCACCATGGTTAACG CAAAAATAATTGGCCCATAAATCAAACCAATTAAACCAAAGAGTTGCAAACCACCTGAGGTATCCCCAGA AATTCTGTAGTTAAAATAAAATGTTAGTTGATTGGGGAACATTCATGGCGGTTCCTGATCTGATCATTCG CCAAAACTCCCACACCGCGGATGCTCACCATGAATGTAAAAGCTATGCTCGCTGATTTCCTCACCTTTGT CACGCCAAAATCAATGCATAAAGCCCGATTTTCGGTTTTGCTAGATGCGGTAACCGCCCTGGCAAAGGAT GCGTGTTGCACCGTTACTGCGATTGGCCGGGCGATGCCTGGCTCTTCAGATAAGGTCAGTATCAAACGGG CAGATCGTCTACTCAATAATCCTAACCTGCAACGAGAGCTGCCATTGATTTATGCTGCGCTGACGGCTTC TATTGTTGGCCATAAAACTAAGCCGATGATTTTGGTTGACTGGAGCAATGCCGATACTGCCAAGCGACAC TTTATCCTGCGTGCCAGCATTGCCGCTGACGGTAGAGCGTTGACTCTGCTACAGAAGATTGCCGCCGCAG AAGATTATACCTGCCCACACCTACACGGGGCGTTTTTAAAGCAGCTTAAAGCCATGCTACCCAAGGACTG TAAGCCCGTAATTGTCACTGACGCGGGGTTTAAAGTTCCATGGCTGAAACAAGTGCGTAAGCTGGGATGG CATTATGTAGCTAGAGTTCGAGGCAATGTGAAGCTTAAATTGGCAGAGCAGGACAAGTTTATCAGTGTTA ATCAGCTTTATCGGCAAGCGAAGAAGGATCCAAAAAGTGTAGGAAAAATCATGCTTGCCCAAACACAACA CTATGAAACGCAGGCCGTCCTGGTTGGCAAAGGTTATAAGCTATTGAAACGCGATAAAAATAAGACGTAT AAGGAACCATGGTTGTTGGTGTCATCCTTAGCTGACTGCCATGGGTATGCGGATAAAATTGCTAAGTGCT ACAGTAGCCGAATGCAAATTGAAGAAAGCTTCCGTGATCAGAAAAGTCACCGCTATGGCCTGGGTAGCGA TTTGCATGGTACCAAGAAGAAATCTCGCTTAGAGATACTGCTACTACTGGCCGCATTGGTTAATTGGTTT CATTACCTGCTAGGTAGCGCAGCGGAGAAAGCGGGTTTGCACCTGCGTTATCAAGCTAACACCGTTAAAA ATAGGCGGGTATTGGCCCTGAATTTCCTTGGGATATTACTTTGCAAAGAACCCAAACAGCGAATACGCAG GCAATATTATCAGCAGGGACTTAAACAAATACTACAGTGGGTGGTTCAGTGGGACTGGGCAGTAATCAAA CAGGCTGATAGCTGATTGTATGAATGGAAATTTTGTGGGGATCCCTCAGGTTGTCTAGACTTCTTTTAAC AGTAAAGTTATCATAAAACTGAATTTTATTTTTTAGGTAAGTTTATGCATTCTATCCGCATTCGTTAAGA CACAACTATTTGCATAGTGACACTATTTTATAATGGTGGGCTTTTGTTGTGTCTTTAAGAATATATGCGG ATATATAAAGTAAAAGTATGCTTAATTTATAAGTATGCTTTTAGTGCATAGTTTCCAGTTATAACTTAAT TGACTAGCTATTTGTCCACCCTGTGGATGAATAGCTTTTTTTTTGGGAGGACACTGTGATGCTAGCTTTT GTTTTCACCTAAATCCTGTTTGCTGCATAAAAAATTTCAAGAGCTAAACAGGAGTAAATAAAAATGAGTT TAATTATTAAAGCGAGAAACATACGCTTGGATTATGCTGGGCGTGATGTTTTGGATATTGATGAATTGGA AATTCACTCTTATGACCGTATTGGTCTTGTGGGTGATAACGGAGCAGGAAAGAGTAGTTTACTCAAAGTA CTTAATGGCGAAATTGTTTTAGCCGAAGCGACATTACAGCGTTTTGGTGATTTTGCACATATCAGCCAAC TGGGCGGAATCGAAATAGAAACGGTCGAAGACCGGGCAATGTTATCTCGCCTTGGTGTTTCCAATGTACA AAACGACACAATGAGTGGCGGAGAGGAAACTCGTGCAAAAATTGCTGCCGCATTTTCCCAACAAGTACAT GGCATTCTAGCGGATGAACCAACCAGCCACCTTGATCTCAATGGAATAGATCTACTTATTGGTCAACTTA AAGCATTTGATGGAGCATTACTTGTTATCAGTCATGACCGATATTTTCTTGATATGGTTGTAGACAAGAT ATGGGAGTTAAAAGACGGTAAAATTACGGAATATTGGGGTGGTTACTCGGATTACTTGCGTCAAAAAGAA GAAGAGCGACAACACCAAGCCGTAGAATATGAGCTGATGATGAAGGAACGGGAGCGATTAGAATCTGCTG TGCAAGAAAAACGCCAGCAAGCTAATCGATTAGACAATAAGAAAAAAGGAGAAAAATCCAAAAACTCTAC CGAAAGTGCTGGACGACTTGGGCATGCAAAAATGACTGGCACCAAGCAAAGAAAACTGTATCAGGCAGCT AAGAGTATGGAAAAGCGTTTGGCTGCATTAGAAGATATTCAAGCACCAGAGCATTTGCGTTCTATTCGTT TTCGTCAAAGTTCAGCCCTAGAACTGCACAATAAGTTCCCGATTACGGCAGATGGTCTGAGCTTAAAATT TGGTAGCCGTACTATCTTTGATGACGCTAACTTTATAATACCGCTTGGCGCTAAAGTCGCTATAACTGGA TCGAATGGAACAGGGAAAACGTCCTTGTTAAAAATGATATCAGAACGTGCTGATGGATTAACCATATCTC CAAAAGCTGAAATTGGCTACTTTACACAAACAGGATATAAATTTAACACGCATAAATCTGTGCTCTCCTT TATGCAGGAAGAGTGCGAGTACACAGTTGCGGAAATTCGTGCAGTATTGGCTTCAATGGGGATCGGAGCG AATGATATTCAAAAAAACTTATCCGACTTATCGGGAGGTGAAATCATCAAACTGCTTTTATCCAAAATGC TTTTAGGAAAATATAATATTTTGCTTATGGATGAACCAGGAAACTATCTTGACCTAAAAAGTATTGCCGC ATTAGAAACAATGATGAAGTCCTATGCAGGAACTATTATCTTCGTATCTCATGACAAGCAATTGGTCGAT AATATTGCTGACATTATCTACGAGATCAAAGACCACAAAATCATCAAGACTTTTGAGAGAGATTGTTAAT GATAGCCAATCTAATCCGAACATTAATTATTGAACTCTTTAAAGGAAATTAAAAATGACAATTCAAGATA TTCAATCACTTGCTGAAGCACACGGCTTGTTGCTTACGGACAAAATGAATTTCAATGAAATGGGCATTGA TTTTAAGGTCGTTTTTGCTCTTGATACAAAGGGGCAACAATGGTTGCTGCGTATTCCTCGTCGTGATGGC ATGAGGGAACAAATCAAGAAAGAAAAACGCATTTTAGAATTGGTAAAAAAACATCTTTCTGTAGAGGTTC CTGATTGGAGAATTTCATCTACAGAATTAGTGGCTTATCCCATACTTAAAGATAATCCTGTTTTAAATTT GGATGCTGAAACCTATGAAATAATTTGGAATATGGACAAAGATAGCCCGAAATACATAACATCTTTGGCA AAAACCTTATTTGAAATCCATAGTATTCCTGAAAAAGAAGTTCGGGAAAATGATTTGAAAATTATGAAAC CTTCAGATTTAAGACCTGAAATAGCAAACAATTTGCAGTTAGTAAAATCTGAAATTGGTATAAGTGAGCA ATTGGAAACCCGCTACAGAAAATGGTTGGATAATGATGTTCTATGGGCAGATTTCACCCAATTTATACAT GGCGATTTATATGCTGGGCATGTACTAGCTTCAAAGGATGGAGCTGTTTCAGGCGTTATTGATTGGTCAA CAGCCCATATAGATGACCCAGCGATTGATTTTGCTGGGCATGTAACTTTGTTTGGAGAAGAAAGCCTCAA AACTCTAATCATCGAGTATGAAAAACTAGGGGGTAAAGTTTGGAATAAACTATATGAACAGACTTTAGAA AGAGCAGCGGCCTCTCCTTTGATGTATGGTTTATTTGCCTTAGAAACTCAAAATGAAAGCCTTATCGTTG GAGCAAAAGCTCAGTTGGGAGTTATATAATTTAAAAATATGATTGCTGAGAACTGCCTTGTTTTGAAACT TGGTTGGCTTTAATTAGTTTTTAGTATTCTTTATAGAAAATGCCTCGATCAAGGGGCATTTCTAACAATC ATTTAACATAAAATTTCTTATACGAAATGCTTGTGTAATGGCTCAATAGTAATGTCCGCCTGTGGCTCAA TTCAGATGTCCGCGCTATGGTAAGCTTCACTGGTCCGTTTAAACTACCGGGAGGCATATCATGAGCGCAG AAAGCTCAGGAGTGTTTACTTTGAAAGAGATCAACCGGATCAAGATTATACAGGACGTCATTGAACGTCG CATCACAACGCGCCGTGCGGCCGAGCACCTCGGTATCAGCGACAGGCAATGCCGCAGACTTCTTGCCCGT TACCGTGAAGGCGGACCGCTTGGTATGGCCAGCAGACGATGTGGCATGCGTGGTAACCGCCAGTTGCCAC CCGGGCTCGCAGATCAGGCTCTGGAACTGATCAAGACGCGTTATGCTGATTTCGGTCCGACTCTGGCGCG TGAAAAGCTCGAAGAACTCCACGGACTGTTTCTTGGCAAAGAAACTGTCCGGCGCATCATGGTGCGGGCT GGCTTATGGGTTCCCCGTAAACAACGTGCCGCAAGGATCCCTCAACCACGGTACCGGCGTCCGTGTACTG GTGAGCTGATACAAATAGATGGCTGTGATCACGACTGGTTTGAAGGCCGTGGCCCGGCCTGCACCGCGCT GGTCTATGTTGATGATGCAACCAGCAAACTGATGGAACTGTTGTTTGTTAAATCGGAGTCCACGTTTTCT TACTTCGAAGCCACGCGGCGCTATATCGATAAGCATGGTAAACCGCTGGCACTGTACAGCGATAAAGCCG GTGTTTTTCGTGTTAACAATAAACACGCCACAGGCGGAGACGGGCATACTCAGTTTGGGCGAGCCATGCA TGAACTGAACATCCAGACTATCTGTGCAGAAACCAGTCCCGCCAAAGGGCGTGTAGAACGAGCTCACCTC ACTTTACAGGATCGTCTGGTCAAAGAGCTGCGGTTACAGGGCATTTGTTCAATGGAGGCTGCAAATGACT TCGCTGAGGCCTATATGGCTGACTATAACCGCCGTTTTGGCAAAGTACCGCGACATGATTTTGACGTACA CCGTGCTGTAGAACATGATGAGGACCTGGGGCTTATTTTCACTGTTCGTGAAAAACGTAAAGTCTCAAAA TCGTTGACGATACAATATGATAAAATGTTGTACCTGATTGAAGACAGCGAACTGAGTCGCCGTGCAATAG GTAAATATATCGATGTGTATCACTATCCTGATGGCAGAAAAGAGCTGCGCCTGAACGGTACGCTACTTCC CTACTCTACCTACGACCGACTGTCAGAAATCGACCAGGGCGCGATTGTCGATAACAAGCGTCTTGGCCGA ACCCTGGAGTTTATCAGTCTGGTGCAGAGCAAGCGGGATAACACGCGCTCTCAGTCAATTCCCGCTGGAG ATGGCCCTTCCCGACGACGGCCAAAGCAGGAAGGGAAGAAATCCCAGCGCTCACTGGATAATGATGACAT GCTCGAAGCACTCAAACAGCTTCAGTCACGTTCAGAGGACATTTTTGGTAAAAGAGCCCGCTGATGGTAC TCACTGGCCGGACAGTGGTTGCTCACCAGTTGATATTGTCCGGCCAGACCCATGATGTATTATTCATTTC GTTCAGCATCTTTATGTCCTGCTTTTCACGGGCATACTTACCCCATAATGAATGAAAAGAACGAACAATA CTGATTAACTGCTTTTTTCTTTGCTCCGGAGATAGGCTGATAAAATAGCAGCACCTGCTGTCAATATTAT CCTCAATGAAATTAAAATCAGAGTCTGATGCATATTTTACTGTTAGCATAATATCATTCGACGTTGTTCT CTCAGACTCTGTTAATGCTGATTCTATCAGGTATTCAAAGGCATACATGACAGACAGCTGGTTTTTGTCT GTCTGAATATAACCCATTGAGTTTCTGAGTATTGAGGACTGTACCAGGACCAGAGGCCATAAAAGCTCAA CACCATAAAGCTTATATGTATCATGTTGATCATACTGATGTTGCTCAACACGACGATTACCTTCCCGTGC TTTACGAATATCATAGGCAAGGGATAACATAAATCCGTCTTTAACTTTAATCAGTGGGCTTTCATCCACG ATGTAATGAATGAGTTCATGTAATTCATTCAGGGCTTCTGAATCTCCCCACAGTATAAAACCTGCATTGT TCGGCGTTAACTCGTATCGAAGCATGGGCTCAATCATCCTGTTGTTTCAGTCGGAGGAAAGTCTATCAGT AAAGAGAATGAGAGATCAAAGTGGTCATTTTAATTGAGCTGGATAACGGACATTTCAATTGAGCCTTGAC AGCTTGATATTTCTCTTTAAATATCATTATATTAACGTAAGCCGTTCTGGAGTATAGGGCACCAGAACGG CTTTTTATTGATTATTCATGTTCCACGATCACTAATTGAGCGATGTTCCACGGTTTTATTCAGTTTTAAT AAACATCATCCGGTTTTTTGAGGAGTCATTATTTCAAGTGCTTGCACTGAAATTGGCTCTTCAAAAAACT GGAGTCTTGGCTAACCATATGGAAGGAAAAAGCGGCTTAGGAAGCCTCTCTTCTTCTGTTCTGGTTCAAC ATGCTCCGGGATAGGAATACGCTTATTGTCTTGCTGAGGAGTAGTCAATTCGTCATAGTTCGTTGCTAGT TCCGACCGAGGATCCGTTGCTATATCCTGTTTAAAGCTCTGATCGGTAAAGGTAGTCATATTGGCTTTTG GTGCTTCTAGTAAGCGCTGCATAGCTTCAATCTGTTCTTGATAAAACGATTCACGTTCTAAAGATTGATT TTCTCTCTGTATTGCCTGATTTAATTGTTTTTCCAGTATGTCAACTTGACGTTTTAGTAAGTCAACTTCT GTCAAGTTTTGACTGTTAATTGATTGACTTTGATTGACTGTATCCTCTTTTTTTTGTGGTTCCCCAAAAA CTCTTAGGGCCTCTGAAAAGTCAATTAATCCATCAGATCCTTTAGATAAATTTCCTTTGTTTATATGTGC ATATATGGCTTGTCTTGAATATCCATAAAGCTTAGCTAACTCTGAAACTGACAGTTTTTTCATTATGTAA ACCAGTTTTCAACTTGTGTTAATACCTGACTGTTAACTTAACAATTTCAATTAACAATGTCATTGAAATC CTAATTTTCTGAGTAAAGGAAGTAATTCCTTAAATTTCTCTGCATCTTGCAGCATGGCAGCTATACGTAC AGCAAACTGCTGATAGCTTTCTGTGCCTTGTGAATATTTACTCATCTCAGGAAGCTCTGAGAGCTTGTTG GCGAATAGATGGCGTTGTTTATCTGTTATTTTTGAAAAGAGGTCTAATGTATTCGGATCTCTTTTAGATT CGACTGAATGCGTGGCTGATTTTTTCTGTTTAAAGCTAAATGAAAAACCAGTAATAGATCTACCTGTTTT ATGCTGTTCAACTTTGACAATAATATCGGTATGTTCATTTACTTGTTTTAATGCAATGTCTAAAACATAT TTTTTAAAATCATACATTCGTTTGTATTCAGTCTCGAGTACACCTATTTTTTGTCTAAAATCATACATAG TTATGAGAGGCGTTTTTCCAGTACTACGCCATGCAATCAATATTTCATATAAACGAACAGCATAAGCACT TGTTAAATTACTTATTTGTTGTATTTCATACTTTGTAAATTGTTCTTCTAACCTAGTAATTAAAGGCACA ATAGCAGGGGCAAAAATAAGTCTAACGACAGCTTCATTATCAATATAAGCCACCTCGCTCACCCATCTTG ATTTGTGATTAATAGTGTTACCTTTTTCACTAAGACTCTGATAACTGAATTGTCTTGCAAACAAGTCATC GCAAGCATCTTTTAACGCCTGATAAGCCGTATTTCGATGTACACGGCACTGTTGCAAATAGTCGGTGGTG ATAAACTTATCATCCCCTTTTGCTGATGGAGCTGCACATGAACCCATTCAAAGGCCGGCATTTTCAGCGT GACATCATTCTGTGGGCCGTACGCTGGTACTGCAAATACGGCATCAGTTACCGTGAGCTGCAGGAGATGC TGGCTGAACGCGGAGTGAATGTCGATCACTCCACGATTTACCGCTGGGTTCAGCGTTATGCGCCTGAAAT GGAAAAACGGCTGCGCTGGTACTGGCGTAACCCTTCCGATCTTTGCCCGTGGCACATGGATGAAACCTAC GTGAAGGTCAATGGCCGCTGGGCGTATCTGTACCGGGCCGTCGACAGCCGGGGCCGCACTGTCGATTTTT ATCTCTCCTCCCGTCGTAACAGCAAAGCTGCATACCGGTTTCTGGGTAAAATCCTCAACAACGTGAAGAA GTGGCAGATCCCGCGATTCATCAACACGGATAAAGCGCCCGCCTATGGTCGCGCGCTTGCTCTGCTCAAA CGCGAAGGCCGGTGCCCGTCTGACGTTGAACACCGACAGATTAAGTACCGGAACAACGTGATTGAATGCG ATCATGGCAAACTGAAACGGATAATCGGCGCCACGCTGGGATTTAAATCCATGAAGACGGCTTACGCCAC CATCAAAGGTATTGAGGTGATGCGTGCACTACGCAAAGGCCAGGCCTCAGCATTTTATTATGGTGATCCC CTGGGCGAAATGCGCCTGGTAAGCAGAGTTTTTGAAATGTAAGGCCTTTGAATAAGACAAAAGGCTGCCT CATCGCTAACTTTGCAACAGTGCCAGGCAGGCTTATCTTGGACAAGAAGATCGCTTGGCCTCGCGCGCAG ATCAGTTGGAAGAATTTGTTCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAAA ACAAAGTTATGCACCTATTAAGCGCACAGCGGAGCAATGAAGGATACCTTGATGAAAAAAATTTTGCTGC TGCATATGTTGGTGTTCGTTTCCGCCACTCTCCCAATCAGTTCCGTGGCTTCTGATGAGGTTGAAACGCT TAAATGCACCATCATCGCAGACGCCATTACCGGAAATACCTTATATGAGACCGGAGAATGTGCCCGTCGT GTGTCTCCGTGCTCGTCTTTTAAACTTCCATTGGCAATCATGGGGTTTGATAGTGGAATCTTGCAGTCGC CAAAATCACCTACGTGGGAATTGAAGCCGGAATACAACCCGTCTCCGAGAGATCGCACATACAAACAAGT CTATCCGGCGCTATGGCAAAGCGACTCTGTTGTCTAGTTCTCGCAGCAATTAACAAGCCGTCTGGGAGTT GATCGGTTCACGGAATACGTAAAGAAATTTGAGTACGGTAATCAAGATGTTTCCGGTGACTCGGGGAAGC ATAACGGCTTGACCCAGTCATGGCTGATGTCGTCGCTCACCATATCTCCCAAGGAGCAAATTCAGTTTCT TCTACGCTTTGTCGCGCATAAGCTGCCTGTATCCGAAGCGGCTTATGACATGGCGTATGCCACAATCCCG CAGTACCAGGCAGCCGAAGGATGGGCTGTACATGGAAAAAGCGGCAGCGGCTGGCTTCGGGACAATAACG GCAAGATAAATGAAAGTCGTCCGCAGGGCTGGTTCGTGGGCTGGGCTGAAAAAAACGGACGGCAAGTTGT TTTCGCCCGATTGGAAATAGGAAAGGAAAAGTCCGATATTCCCGGCGGGTCTAAAGCACGAGAGGATATT CTCGTGGAATTACCCGTGTTGATGGGTAACAAATGATATGTGGCGTCATCGAGAGCAGATGCATAACCCT GCGCTCGAGCGGACCTCGCGCATAAAGCCGCGCGAGTCCGCTCACCTTGAACGTTAGATGCACTAAGCAC ATAATTGCTCACAGCCAAACTATCAGGTCAAGTCTGCTTTTATTATTTTTAAGCGTGCATAATAAGCCCT ACACAAATTGGGAGATATATCATGAAAAGAGTTTGATGCTCAGGGTGTAGCGGTTCGGTTTATTGACGAC GGGATCAGTACCGACGGTGATATGGGGCAAATGGTGGTCACCATCCTGTCGGCTGTGGCACAGGCTGAAC GCCGGAGGATCCTAGAGCGCACGAATGAGGGCCGACAGGAAGCAAAGCTGAAAGGAATCAAATTTGGCCG CAGGCGTACCGTGGACAGGAACGTCGTGCTGACGCTTCATCAGAAGGGCACTGGTGCAACGGAAATTGCT CATCAGCTCAGTATTGCCCGCTCCACGGTTTATAAAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCT ATTTTTATAGGTTAATGTCATGATAATAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTG CGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCT GATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCC CTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAA GATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTC GCCCCGAAGAACGTTTTCCAATGATGAGCACTTTTAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTGT TGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCA GTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTG ATAACACTGCTGCCAACTTACTTCTGACAACGATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAA CATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAG CGTGACACCACGATGCCTGCAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTC TAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGC CCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCA GCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGG ATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAACTGTCAGACCAAGT TTACTCATATATACTTTAGATTGATTTAAAACTTCATTTTTAATTTAAAAGGATCTAGGTGAAGATCCTT TTTGATAATCTCATGACCAAAATCCCTTAACGTGAGTTTTCGTTCCACTGAGCGTCAGACCCCTTGTTGA GGATTTTACCCAGAAACCGGTATGCAGCTTTGCTGTTACGACGGGAGGAGAGATAAAAATCGACAGTGCG GCCCCGGCTGTCGACGGCCCGGTACAGATACGCCCAGCGGCCATTGACCTTCACGTAGGTTTCATCCATG TGCCACGGGCAAAGATCGGAAGGGTTACGCCAGTACCAGCGCAGCCGTTTTTCCATTTCAGGCGCATAAC GCTGAACCCAGCGGTAAATCGTGGAGTGATCGACATTCACTCCGCGTTCAGCCAGCATCTCCTGCAGCTC ACGGTAACTGATGCCGTATTTGCAGTACCAGCGTACGGCCCACAGAATGATGTCACGCTGAAAATGCCGG CCTTTGAATGGGTTCATGTGCAGCTCCATCAGCAAAAGGGGATGATAAGTTTATCACCACCGACTATTTG CAACAGTGCCCATCGGCGTAGTAGTGGATGTGGTCGATGACAAAGCCGGTGCGGGTCAGCGTGCGCCGGA GGATCGGCAGAAAATCGACCAGGAACGAAGTAGCGCGTGTGACGACGGCCGGTACGCCGACACGCGCCAC GGCCTCGGCCCAGCGCGCGGCCGGCGGTTGGAGCAGGCCGTTGTGCACCGAACCGTGGTAGGTGCCGACC GCCAATGTGAGCCAGCGCTCTAGCTCGCGCAGCGTCAGGGCGGCCTTGTTTTCGGAATCGTAGTCGCCGC GCTGGTCAGGGTTGGAGAAGGTCGTTCCCGGCAGTTCGTCGTGAATCATCTGCATCGCCGTGCCGATGAT CCGTTCCACGATGCCGCCATAGTGCGGCTGTCCCAGCGGGCGATAGTCCAGCCGGATGCCATGCTGCTCG CAACCCCGGCGCAGGGCCTCGCTCTTGAACTCGGCCGCGTTGTCTAGGTAGAGCAGCAAGGGCTTGCCGC TCATCTGCCAATCCATTTCCACGTTCAGTCCTTCCAGCCAAGGGCGCTTGTCGCAGGCGACATGCACGAG GCACAGGCCAACCGAAACGGCAGACGGCGCTTCCAGCGTGACGACCATGCCGAGCACGCAGCGGGTGAAC ACGTCGATGGCGAGGGTCAGGTACGGGCGGCCAATAGGTTGCCGGTCGCGGTCATCGACCACGATCAGGT CGATGACCGTATGGTCTATCTGCACCTGCTCCAGCGGCGCGGTCACGGCAGGAGGCTCGCCGCCCACACC TTGTAGGTCACGAGCGGCATCCTGGCCTTCCCGCCGGCGGATGACCTTGCGCGGGTCAAGGCTAGCGATC CGTAAGGCCACGGTATTGCGCGCCGGCACTCGCAGTTTTTGAGCCTTGCACACCTGAGTGACTTCGCGGT GAAAGGCCGCTAGGCTGCGCTTCTGCTTGGTCAGGAACCGCTTTTGCAGTAGCTCGTGGATGACGCGCTC GACCGGTTCCGGCAAGCGCCCCTTACCTTTACCTCCACCGGACTGGCCGGGCACCAGATCCGTCACGAGG CCGCTGCCTTGCCGGGCACGCCGGATCAGAACGTATACCTGGCGCCGAGACAAGCCCAGCGCCTGAGCCG CCATATCGGCCGCTTCGTGCCCGACCGTCTCCGACTGCGCCAACGGACTGATGATCTCCGCACGACGGCG CGCACGCTCCCAAGCCTCATCAGGCAGAGTGGCCACGCCTTGTTCTGGAATCCGTGGGGTGTCCGTCGCC AT
Region Details
| Region | 1 |
| Region Length | 15.6Kb |
| Completeness(score) | incomplete(60) |
| Specific Keyword | transposase |
| Region Position | 62568-78249 |
| # tRNA | 0 |
| # Total Proteins | 19 |
| # Phage Hit Proteins | 9 |
| # Hypothetical Proteins | 0 |
| Phage + Hypothetical Protein % | 47.3% |
| # Bacterial Proteins | 10 |
| Attachment Site | yes |
| # Phage Species | 5 |
| Most Common Phage Name(hit genes count) | PHAGE_Staphy_SPbeta_like_NC_029119(2) PHAGE_Sodali_phiSG1_NC_007902(2) PHAGE_Salmon_SJ46_NC_031129(2) PHAGE_Plankt_PaV_LD_NC_016564(1) PHAGE_Bacill_G_NC_023719(1) PHAGE_Burkho_KS14_NC_015273(1) PHAGE_Shigel_SfII_NC_021857(1) |
| First Most Common Phage # | 4 |
| First Most Common Phage % | 10.52% |
| GC % | 45.10% |
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| # tRNA: | The number of tRNA genes present in the region. |
| # Total Proteins: | The number of ORFs present in the region. |
| # Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
| # Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
| Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
| # Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
| Attachment Site: | The putative phage attachment site. |
| # Phage Species: | The number of different phages that have similar proteins to those in the region. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
| First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
| GC %: | The percentage of GC nucleotides of the region. |
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Questionable (score 70-90)
Incomplete (score < 70)
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Score: | The score of the region based on the above criteria. |
| # Total Proteins: | The number of ORFs present in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| GC %: | The percentage of GC nucleotides of the region. |
Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
- If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
- If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
- If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
- If the size of the region is greater than 30 Kb, the score will be increased by 10.
- If there are at least 40 proteins in the region, the score will be increased by 10.
- If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
gi|00000000|ref|LT009689.1| Klebsiella pneumoniae plasmid pIT-12C73, strain 12C73, complete 106320, gc%: 52.84%
Download details as .txt file: detail.txt file_download
Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File
Hits against Bacterial Database or GenBank File
Region 1, total 21 CDS
| # | CDS Position | BLAST Hit | E-Value | Sequence |
|---|---|---|---|---|
| 1 | complement(62568..63272) | PROPHAGE_Brucel_1330: transposase, putative; -; phage(gi23502708) | 1.98e-53 | Showinfo_outline |
| 2 | 63309..63336 | attL | 0.0 | Showinfo_outline |
| 3 | 63549..64322 | -; - | 0.0 | Showinfo_outline |
| 4 | 64494..64628 | -; - | 0.0 | Showinfo_outline |
| 5 | complement(64804..64989) | -; - | 0.0 | Showinfo_outline |
| 6 | 65047..66222 | PHAGE_Shigel_SfII_NC_021857: transposase; -; phage(gi526244660) | 2.75e-56 | Showinfo_outline |
| 7 | 66621..68096 | PHAGE_Bacill_G_NC_023719: gp245; -; phage(gi593777701) | 2.03e-13 | Showinfo_outline |
| 8 | 68152..69036 | -; - | 0.0 | Showinfo_outline |
| 9 | 69278..70681 | -; - | 0.0 | Showinfo_outline |
| 10 | complement(70710..71342) | -; - | 0.0 | Showinfo_outline |
| 11 | complement(71678..72220) | -; - | 0.0 | Showinfo_outline |
| 12 | complement(72287..73114) | PHAGE_Sodali_phiSG1_NC_007902: putative replication protein; -; phage(gi89886026) | 1.63e-09 | Showinfo_outline |
| 13 | 73105..73809 | PROPHAGE_Brucel_1330: transposase, putative; -; phage(gi23502708) | 1.98e-53 | Showinfo_outline |
| 14 | 73815..73937 | -; - | 0.0 | Showinfo_outline |
| 15 | 74029..74364 | -; - | 0.0 | Showinfo_outline |
| 16 | 74476..74853 | -; - | 0.0 | Showinfo_outline |
| 17 | 75128..75370 | PHAGE_Sodali_phiSG1_NC_007902: resolvase; -; phage(gi89886020) | 5.44e-09 | Showinfo_outline |
| 18 | 75553..76413 | PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; -; phage(gi100066) | 5.20e-57 | Showinfo_outline |
| 19 | complement(76524..76934) | PROPHAGE_Brucel_1330: transposase, putative; -; phage(gi23502708) | 7.58e-38 | Showinfo_outline |
| 20 | 76971..76998 | attR | 0.0 | Showinfo_outline |
| 21 | complement(76981..78249) | PROPHAGE_Brucel_1330: transposase, putative; -; phage(gi23501616) | 1.01e-33 | Showinfo_outline |
Sequence
>complement(62568..63272)
KlebsiellapneumoniaeMNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
Sequence
>63309..63336
TCACCACCGACTATTTGCAACAGTGCCC
Sequence
>63549..64322
KlebsiellapneumoniaeMDKNDVVKKILESKKYENLDSDIVEKVVSISEKKYKLKEVENYSKKKLHQIWGSYYSAYPNWDKLLKKYNQGQLSIEDLLKIHSSTNERVATLNDFYTYVFGNIKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESDVYKGTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQNFVISFPIKSLSGKEKGMEENYQLWFESFTKGWIKILDSKVIGNELVYITSGFQK
Sequence
>64494..64628
KlebsiellapneumoniaeMKFRLSSAILKHLLCFSKVLDYLFLGQHRGYFEEKIGFNYSLEG
Sequence
>complement(64804..64989)
KlebsiellapneumoniaeMFPNQLTFYFNYRISGDTSGGLQLFGLIGLIYGPIIFALTMVLLRLYTIEFKDFLERQDNS
Sequence
>65047..66222
KlebsiellapneumoniaeMNVKAMLADFLTFVTPKSMHKARFSVLLDAVTALAKDACCTVTAIGRAMPGSSDKVSIKRADRLLNNPNLQRELPLIYAALTASIVGHKTKPMILVDWSNADTAKRHFILRASIAADGRALTLLQKIAAAEDYTCPHLHGAFLKQLKAMLPKDCKPVIVTDAGFKVPWLKQVRKLGWHYVARVRGNVKLKLAEQDKFISVNQLYRQAKKDPKSVGKIMLAQTQHYETQAVLVGKGYKLLKRDKNKTYKEPWLLVSSLADCHGYADKIAKCYSSRMQIEESFRDQKSHRYGLGSDLHGTKKKSRLEILLLLAALVNWFHYLLGSAAEKAGLHLRYQANTVKNRRVLALNFLGILLCKEPKQRIRRQYYQQGLKQILQWVVQWDWAVIKQADS
Sequence
>66621..68096
KlebsiellapneumoniaeMSLIIKARNIRLDYAGRDVLDIDELEIHSYDRIGLVGDNGAGKSSLLKVLNGEIVLAEATLQRFGDFAHISQLGGIEIETVEDRAMLSRLGVSNVQNDTMSGGEETRAKIAAAFSQQVHGILADEPTSHLDLNGIDLLIGQLKAFDGALLVISHDRYFLDMVVDKIWELKDGKITEYWGGYSDYLRQKEEERQHQAVEYELMMKERERLESAVQEKRQQANRLDNKKKGEKSKNSTESAGRLGHAKMTGTKQRKLYQAAKSMEKRLAALEDIQAPEHLRSIRFRQSSALELHNKFPITADGLSLKFGSRTIFDDANFIIPLGAKVAITGSNGTGKTSLLKMISERADGLTISPKAEIGYFTQTGYKFNTHKSVLSFMQEECEYTVAEIRAVLASMGIGANDIQKNLSDLSGGEIIKLLLSKMLLGKYNILLMDEPGNYLDLKSIAALETMMKSYAGTIIFVSHDKQLVDNIADIIYEIKDHKIIKTFERDC
Sequence
>68152..69036
KlebsiellapneumoniaeMTIQDIQSLAEAHGLLLTDKMNFNEMGIDFKVVFALDTKGQQWLLRIPRRDGMREQIKKEKRILELVKKHLSVEVPDWRISSTELVAYPILKDNPVLNLDAETYEIIWNMDKDSPKYITSLAKTLFEIHSIPEKEVRENDLKIMKPSDLRPEIANNLQLVKSEIGISEQLETRYRKWLDNDVLWADFTQFIHGDLYAGHVLASKDGAVSGVIDWSTAHIDDPAIDFAGHVTLFGEESLKTLIIEYEKLGGKVWNKLYEQTLERAAASPLMYGLFALETQNESLIVGAKAQLGVI
Sequence
>69278..70681
KlebsiellapneumoniaeMSAESSGVFTLKEINRIKIIQDVIERRITTRRAAEHLGISDRQCRRLLARYREGGPLGMASRRCGMRGNRQLPPGLADQALELIKTRYADFGPTLAREKLEELHGLFLGKETVRRIMVRAGLWVPRKQRAARIPQPRYRRPCTGELIQIDGCDHDWFEGRGPACTALVYVDDATSKLMELLFVKSESTFSYFEATRRYIDKHGKPLALYSDKAGVFRVNNKHATGGDGHTQFGRAMHELNIQTICAETSPAKGRVERAHLTLQDRLVKELRLQGICSMEAANDFAEAYMADYNRRFGKVPRHDFDVHRAVEHDEDLGLIFTVREKRKVSKSLTIQYDKMLYLIEDSELSRRAIGKYIDVYHYPDGRKELRLNGTLLPYSTYDRLSEIDQGAIVDNKRLGRTLEFISLVQSKRDNTRSQSIPAGDGPSRRRPKQEGKKSQRSLDNDDMLEALKQLQSRSEDIFGKRAR
Sequence
>complement(70710..71342)
KlebsiellapneumoniaeMLRYELTPNNAGFILWGDSEALNELHELIHYIVDESPLIKVKDGFMLSLAYDIRKAREGNRRVEQHQYDQHDTYKLYGVELLWPLVLVQSSILRNSMGYIQTDKNQLSVMYAFEYLIESALTESERTTSNDIMLTVKYASDSDFNFIEDNIDSRCCYFISLSPEQRKKQLISIVRSFHSLWGKYAREKQDIKMLNEMNNTSWVWPDNINW
Sequence
>complement(71678..72220)
KlebsiellapneumoniaeMKKLSVSELAKLYGYSRQAIYAHINKGNLSKGSDGLIDFSEALRVFGEPQKKEDTVNQSQSINSQNLTEVDLLKRQVDILEKQLNQAIQRENQSLERESFYQEQIEAMQRLLEAPKANMTTFTDQSFKQDIATDPRSELATNYDELTTPQQDNKRIPIPEHVEPEQKKRGFLSRFFLPYG
Sequence
>complement(72287..73114)
KlebsiellapneumoniaeMGSCAAPSAKGDDKFITTDYLQQCRVHRNTAYQALKDACDDLFARQFSYQSLSEKGNTINHKSRWVSEVAYIDNEAVVRLIFAPAIVPLITRLEEQFTKYEIQQISNLTSAYAVRLYEILIAWRSTGKTPLITMYDFRQKIGVLETEYKRMYDFKKYVLDIALKQVNEHTDIIVKVEQHKTGRSITGFSFSFKQKKSATHSVESKRDPNTLDLFSKITDKQRHLFANKLSELPEMSKYSQGTESYQQFAVRIAAMLQDAEKFKELLPLLRKLGFQ
Sequence
>73105..73809
KlebsiellapneumoniaeMNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
Sequence
>73815..73937
KlebsiellapneumoniaeMNKTKGCLIANFATVPGRLILDKKIAWPRAQISWKNLFTT
Sequence
>74029..74364
KlebsiellapneumoniaeMKKILLLHMLVFVSATLPISSVASDEVETLKCTIIADAITGNTLYETGECARRVSPCSSFKLPLAIMGFDSGILQSPKSPTWELKPEYNPSPRDRTYKQVYPALWQSDSVV
Sequence
>74476..74853
KlebsiellapneumoniaeMTQSWLMSSLTISPKEQIQFLLRFVAHKLPVSEAAYDMAYATIPQYQAAEGWAVHGKSGSGWLRDNNGKINESRPQGWFVGWAEKNGRQVVFARLEIGKEKSDIPGGSKAREDILVELPVLMGNK
Sequence
>75128..75370
KlebsiellapneumoniaeMVVTILSAVAQAERRRILERTNEGRQEAKLKGIKFGRRRTVDRNVVLTLHQKGTGATEIAHQLSIARSTVYKILEDERAS
Sequence
>75553..76413
KlebsiellapneumoniaeMSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGASLIKHW
Sequence
>complement(76524..76934)
KlebsiellapneumoniaeMNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNKGSDAQWNENSR
Sequence
>76971..76998
TCACCACCGACTATTTGCAACAGTGCCC
Sequence
>complement(76981..78249)
KlebsiellapneumoniaeMATDTPRIPEQGVATLPDEAWERARRRAEIISPLAQSETVGHEAADMAAQALGLSRRQVYVLIRRARQGSGLVTDLVPGQSGGGKGKGRLPEPVERVIHELLQKRFLTKQKRSLAAFHREVTQVCKAQKLRVPARNTVALRIASLDPRKVIRRREGQDAARDLQGVGGEPPAVTAPLEQVQIDHTVIDLIVVDDRDRQPIGRPYLTLAIDVFTRCVLGMVVTLEAPSAVSVGLCLVHVACDKRPWLEGLNVEMDWQMSGKPLLLYLDNAAEFKSEALRRGCEQHGIRLDYRPLGQPHYGGIVERIIGTAMQMIHDELPGTTFSNPDQRGDYDSENKAALTLRELERWLTLAVGTYHGSVHNGLLQPPAARWAEAVARVGVPAVVTRATSFLVDFLPILRRTLTRTGFVIDHIHYYADGHCCK
Click on a region to see details.
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Length: 106320 bps
Phages: 1
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Click on a region in the genome above to show details here.
Click on a region in the genome above to show details here.
Viewer Options
Click on a sequence to see details.
Locus 1: PROPHAGE_Brucel_1330 transposase, putative (Region 1)
Locus: PROPHAGE_Brucel_1330 transposase, putativeORF Start: 62568
ORF Stop: 63272
Strand: Backward
Protein Sequence: MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: PROPHAGE_Brucel_1330 transposase, putative, -, phage(gi23502708), PROPHAGE_Brucel_1330
Homolog/Ortholog E-Value: 1.98e-53
Locus 2: attL (Region 1)
Locus: attLORF Start: 63309
ORF Stop: 63336
Strand: Forward
Protein Sequence: TCACCACCGACTATTTGCAACAGTGCCC
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attL
Homolog/Ortholog E-Value: N/A
Locus 3: 63549 (Region 1)
Locus: 63549ORF Start: 63549
ORF Stop: 64322
Strand: Forward
Protein Sequence: MDKNDVVKKILESKKYENLDSDIVEKVVSISEKKYKLKEVENYSKKKLHQIWGSYYSAYPNWDKLLKKYNQGQLSIEDLLKIHSSTNERVATLNDFYTYVFGNIKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESDVYKGTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQNFVISFPIKSLSGKEKGMEENYQLWFESFTKGWIKILDSKVIGNELVYITSGFQK
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: 63549, -, -
Homolog/Ortholog E-Value: N/A
Locus 4: 64494 (Region 1)
Locus: 64494ORF Start: 64494
ORF Stop: 64628
Strand: Forward
Protein Sequence: MKFRLSSAILKHLLCFSKVLDYLFLGQHRGYFEEKIGFNYSLEG
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: 64494, -, -
Homolog/Ortholog E-Value: N/A
Locus 5: 64804 (Region 1)
Locus: 64804ORF Start: 64804
ORF Stop: 64989
Strand: Backward
Protein Sequence: MFPNQLTFYFNYRISGDTSGGLQLFGLIGLIYGPIIFALTMVLLRLYTIEFKDFLERQDNS
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: 64804, -, -
Homolog/Ortholog E-Value: N/A
Locus 6: PHAGE_Shigel_SfII_NC_021857 transposase (Region 1)
Locus: PHAGE_Shigel_SfII_NC_021857 transposaseORF Start: 65047
ORF Stop: 66222
Strand: Forward
Protein Sequence: MNVKAMLADFLTFVTPKSMHKARFSVLLDAVTALAKDACCTVTAIGRAMPGSSDKVSIKRADRLLNNPNLQRELPLIYAALTASIVGHKTKPMILVDWSNADTAKRHFILRASIAADGRALTLLQKIAAAEDYTCPHLHGAFLKQLKAMLPKDCKPVIVTDAGFKVPWLKQVRKLGWHYVARVRGNVKLKLAEQDKFISVNQLYRQAKKDPKSVGKIMLAQTQHYETQAVLVGKGYKLLKRDKNKTYKEPWLLVSSLADCHGYADKIAKCYSSRMQIEESFRDQKSHRYGLGSDLHGTKKKSRLEILLLLAALVNWFHYLLGSAAEKAGLHLRYQANTVKNRRVLALNFLGILLCKEPKQRIRRQYYQQGLKQILQWVVQWDWAVIKQADS
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: PHAGE_Shigel_SfII_NC_021857 transposase, -, phage(gi526244660), PHAGE_Shigel_SfII_NC_021857
Homolog/Ortholog E-Value: 2.75e-56
Locus 7: PHAGE_Bacill_G_NC_023719 gp245 (Region 1)
Locus: PHAGE_Bacill_G_NC_023719 gp245ORF Start: 66621
ORF Stop: 68096
Strand: Forward
Protein Sequence: MSLIIKARNIRLDYAGRDVLDIDELEIHSYDRIGLVGDNGAGKSSLLKVLNGEIVLAEATLQRFGDFAHISQLGGIEIETVEDRAMLSRLGVSNVQNDTMSGGEETRAKIAAAFSQQVHGILADEPTSHLDLNGIDLLIGQLKAFDGALLVISHDRYFLDMVVDKIWELKDGKITEYWGGYSDYLRQKEEERQHQAVEYELMMKERERLESAVQEKRQQANRLDNKKKGEKSKNSTESAGRLGHAKMTGTKQRKLYQAAKSMEKRLAALEDIQAPEHLRSIRFRQSSALELHNKFPITADGLSLKFGSRTIFDDANFIIPLGAKVAITGSNGTGKTSLLKMISERADGLTISPKAEIGYFTQTGYKFNTHKSVLSFMQEECEYTVAEIRAVLASMGIGANDIQKNLSDLSGGEIIKLLLSKMLLGKYNILLMDEPGNYLDLKSIAALETMMKSYAGTIIFVSHDKQLVDNIADIIYEIKDHKIIKTFERDC
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: PHAGE_Bacill_G_NC_023719 gp245, -, phage(gi593777701), PHAGE_Bacill_G_NC_023719
Homolog/Ortholog E-Value: 2.03e-13
Locus 8: 68152 (Region 1)
Locus: 68152ORF Start: 68152
ORF Stop: 69036
Strand: Forward
Protein Sequence: MTIQDIQSLAEAHGLLLTDKMNFNEMGIDFKVVFALDTKGQQWLLRIPRRDGMREQIKKEKRILELVKKHLSVEVPDWRISSTELVAYPILKDNPVLNLDAETYEIIWNMDKDSPKYITSLAKTLFEIHSIPEKEVRENDLKIMKPSDLRPEIANNLQLVKSEIGISEQLETRYRKWLDNDVLWADFTQFIHGDLYAGHVLASKDGAVSGVIDWSTAHIDDPAIDFAGHVTLFGEESLKTLIIEYEKLGGKVWNKLYEQTLERAAASPLMYGLFALETQNESLIVGAKAQLGVI
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: 68152, -, -
Homolog/Ortholog E-Value: N/A
Locus 9: 69278 (Region 1)
Locus: 69278ORF Start: 69278
ORF Stop: 70681
Strand: Forward
Protein Sequence: MSAESSGVFTLKEINRIKIIQDVIERRITTRRAAEHLGISDRQCRRLLARYREGGPLGMASRRCGMRGNRQLPPGLADQALELIKTRYADFGPTLAREKLEELHGLFLGKETVRRIMVRAGLWVPRKQRAARIPQPRYRRPCTGELIQIDGCDHDWFEGRGPACTALVYVDDATSKLMELLFVKSESTFSYFEATRRYIDKHGKPLALYSDKAGVFRVNNKHATGGDGHTQFGRAMHELNIQTICAETSPAKGRVERAHLTLQDRLVKELRLQGICSMEAANDFAEAYMADYNRRFGKVPRHDFDVHRAVEHDEDLGLIFTVREKRKVSKSLTIQYDKMLYLIEDSELSRRAIGKYIDVYHYPDGRKELRLNGTLLPYSTYDRLSEIDQGAIVDNKRLGRTLEFISLVQSKRDNTRSQSIPAGDGPSRRRPKQEGKKSQRSLDNDDMLEALKQLQSRSEDIFGKRAR
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: 69278, -, -
Homolog/Ortholog E-Value: N/A
Locus 10: 70710 (Region 1)
Locus: 70710ORF Start: 70710
ORF Stop: 71342
Strand: Backward
Protein Sequence: MLRYELTPNNAGFILWGDSEALNELHELIHYIVDESPLIKVKDGFMLSLAYDIRKAREGNRRVEQHQYDQHDTYKLYGVELLWPLVLVQSSILRNSMGYIQTDKNQLSVMYAFEYLIESALTESERTTSNDIMLTVKYASDSDFNFIEDNIDSRCCYFISLSPEQRKKQLISIVRSFHSLWGKYAREKQDIKMLNEMNNTSWVWPDNINW
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: 70710, -, -
Homolog/Ortholog E-Value: N/A
Locus 11: 71678 (Region 1)
Locus: 71678ORF Start: 71678
ORF Stop: 72220
Strand: Backward
Protein Sequence: MKKLSVSELAKLYGYSRQAIYAHINKGNLSKGSDGLIDFSEALRVFGEPQKKEDTVNQSQSINSQNLTEVDLLKRQVDILEKQLNQAIQRENQSLERESFYQEQIEAMQRLLEAPKANMTTFTDQSFKQDIATDPRSELATNYDELTTPQQDNKRIPIPEHVEPEQKKRGFLSRFFLPYG
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: 71678, -, -
Homolog/Ortholog E-Value: N/A
Locus 12: PHAGE_Sodali_phiSG1_NC_007902 putative replication protein (Region 1)
Locus: PHAGE_Sodali_phiSG1_NC_007902 putative replication proteinORF Start: 72287
ORF Stop: 73114
Strand: Backward
Protein Sequence: MGSCAAPSAKGDDKFITTDYLQQCRVHRNTAYQALKDACDDLFARQFSYQSLSEKGNTINHKSRWVSEVAYIDNEAVVRLIFAPAIVPLITRLEEQFTKYEIQQISNLTSAYAVRLYEILIAWRSTGKTPLITMYDFRQKIGVLETEYKRMYDFKKYVLDIALKQVNEHTDIIVKVEQHKTGRSITGFSFSFKQKKSATHSVESKRDPNTLDLFSKITDKQRHLFANKLSELPEMSKYSQGTESYQQFAVRIAAMLQDAEKFKELLPLLRKLGFQ
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: PHAGE_Sodali_phiSG1_NC_007902 putative replication protein, -, phage(gi89886026), PHAGE_Sodali_phiSG1_NC_007902
Homolog/Ortholog E-Value: 1.63e-09
Locus 13: PROPHAGE_Brucel_1330 transposase, putative (Region 1)
Locus: PROPHAGE_Brucel_1330 transposase, putativeORF Start: 73105
ORF Stop: 73809
Strand: Forward
Protein Sequence: MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: PROPHAGE_Brucel_1330 transposase, putative, -, phage(gi23502708), PROPHAGE_Brucel_1330
Homolog/Ortholog E-Value: 1.98e-53
Locus 14: 73815 (Region 1)
Locus: 73815ORF Start: 73815
ORF Stop: 73937
Strand: Forward
Protein Sequence: MNKTKGCLIANFATVPGRLILDKKIAWPRAQISWKNLFTT
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: 73815, -, -
Homolog/Ortholog E-Value: N/A
Locus 15: 74029 (Region 1)
Locus: 74029ORF Start: 74029
ORF Stop: 74364
Strand: Forward
Protein Sequence: MKKILLLHMLVFVSATLPISSVASDEVETLKCTIIADAITGNTLYETGECARRVSPCSSFKLPLAIMGFDSGILQSPKSPTWELKPEYNPSPRDRTYKQVYPALWQSDSVV
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: 74029, -, -
Homolog/Ortholog E-Value: N/A
Locus 16: 74476 (Region 1)
Locus: 74476ORF Start: 74476
ORF Stop: 74853
Strand: Forward
Protein Sequence: MTQSWLMSSLTISPKEQIQFLLRFVAHKLPVSEAAYDMAYATIPQYQAAEGWAVHGKSGSGWLRDNNGKINESRPQGWFVGWAEKNGRQVVFARLEIGKEKSDIPGGSKAREDILVELPVLMGNK
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: 74476, -, -
Homolog/Ortholog E-Value: N/A
Locus 17: PHAGE_Sodali_phiSG1_NC_007902 resolvase (Region 1)
Locus: PHAGE_Sodali_phiSG1_NC_007902 resolvaseORF Start: 75128
ORF Stop: 75370
Strand: Forward
Protein Sequence: MVVTILSAVAQAERRRILERTNEGRQEAKLKGIKFGRRRTVDRNVVLTLHQKGTGATEIAHQLSIARSTVYKILEDERAS
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: PHAGE_Sodali_phiSG1_NC_007902 resolvase, -, phage(gi89886020), PHAGE_Sodali_phiSG1_NC_007902
Homolog/Ortholog E-Value: 5.44e-09
Locus 18: PHAGE_Salmon_SJ46_NC_031129 hypothetical protein (Region 1)
Locus: PHAGE_Salmon_SJ46_NC_031129 hypothetical proteinORF Start: 75553
ORF Stop: 76413
Strand: Forward
Protein Sequence: MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGASLIKHW
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: PHAGE_Salmon_SJ46_NC_031129 hypothetical protein, -, phage(gi100066), PHAGE_Salmon_SJ46_NC_031129
Homolog/Ortholog E-Value: 5.20e-57
Locus 19: PROPHAGE_Brucel_1330 transposase, putative (Region 1)
Locus: PROPHAGE_Brucel_1330 transposase, putativeORF Start: 76524
ORF Stop: 76934
Strand: Backward
Protein Sequence: MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNKGSDAQWNENSR
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: PROPHAGE_Brucel_1330 transposase, putative, -, phage(gi23502708), PROPHAGE_Brucel_1330
Homolog/Ortholog E-Value: 7.58e-38
Locus 20: attR (Region 1)
Locus: attRORF Start: 76971
ORF Stop: 76998
Strand: Forward
Protein Sequence: TCACCACCGACTATTTGCAACAGTGCCC
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attR
Homolog/Ortholog E-Value: N/A
Locus 21: PROPHAGE_Brucel_1330 transposase, putative (Region 1)
Locus: PROPHAGE_Brucel_1330 transposase, putativeORF Start: 76981
ORF Stop: 78249
Strand: Backward
Protein Sequence: MATDTPRIPEQGVATLPDEAWERARRRAEIISPLAQSETVGHEAADMAAQALGLSRRQVYVLIRRARQGSGLVTDLVPGQSGGGKGKGRLPEPVERVIHELLQKRFLTKQKRSLAAFHREVTQVCKAQKLRVPARNTVALRIASLDPRKVIRRREGQDAARDLQGVGGEPPAVTAPLEQVQIDHTVIDLIVVDDRDRQPIGRPYLTLAIDVFTRCVLGMVVTLEAPSAVSVGLCLVHVACDKRPWLEGLNVEMDWQMSGKPLLLYLDNAAEFKSEALRRGCEQHGIRLDYRPLGQPHYGGIVERIIGTAMQMIHDELPGTTFSNPDQRGDYDSENKAALTLRELERWLTLAVGTYHGSVHNGLLQPPAARWAEAVARVGVPAVVTRATSFLVDFLPILRRTLTRTGFVIDHIHYYADGHCCK
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: PROPHAGE_Brucel_1330 transposase, putative, -, phage(gi23501616), PROPHAGE_Brucel_1330
Homolog/Ortholog E-Value: 1.01e-33
Lysis
Terminase
Portal Protein
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Other
Transposase
Fiber Protein
Plate Protein
tRNA
Plate Protein
tRNA
Download data as .txt file: png_input file_download