gi|00000000|ref|CP014765.1|  Klebsiella pneumoniae strain KPNIH39 plasmid pKpQIL-9b8, complete 106559, gc%: 53.73%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
8823..8834                         attL                                                                                 N/A                 CAGGGCGAGAGC
complement(8934..10649)            PHAGE_Gordon_Utz_NC_030921: hypothetical protein; WM47_28385; phage(gi100031)        1.22e-05            KlebsiellapneumoniaeMKTGQTTASSSTPVGFPDADSLAALRGWYAGLSSRAAVEHYLAARKAAGQSARGMLGHIRRQLIVFANSRHRPDLADVFQHAPEERQGRAGAVERAIRLLPTLPAPKPQISDSIDQWLSPRTVRALQAYGIHTLSALTVRIPRRRGWWKAIEGLGMTGARQVEAFFAAHPQLTERARALIPIIQPSGIVPWEQLRLPNEVDGSQGNFRAPRNACTLNATNDYEAVQAWLALHETVATQRAYRKEAARLILWAIVERGRALSSLTTDDAIAYRAFVRHPTPRERWVGPPRPRDSVEWRPFSGGLSARSAAYALTVLSALFRWLIEQRYVLANPFAGVKVRGHALRPALDTARGFTEGEWLLLRAIADGLEWSYGWSEPAAQRLRFMLDFGYATGLRASELVGAVLGNVRLDEHGDHWLHLVGKGGKPGKVALPPLAYTALDQYLAQRQLPVSRERWNPKTPLVGSLGEDGNAGITGPHLWCVLRRFFTQAAEAIEADHPVAAEKLRRATPHWMRHSHASHALARGAQLTAVRDNLRHASIATTSMYLHGDELERARQMRQAFGARHVKRGVD
10759..13788                       PROPHAGE_Xantho_306: Tn5044 transposase; WM47_28390; phage(gi21243163)               0.0                 KlebsiellapneumoniaeMSKKNKLLSVLSDAEQEALYGLPEFDDAQQLEYLAVTETELALANSRPSLHAKVYCLLQIGYFKAKHAFFSFDWDEVEDDCAFVLSRYFHGEVFEPKAITKHERYTQREQIAKLFGYWPWSAAFLPQLEQQAARTVRRDVTPGFVAAELIVWLNEHKIIRPGYTTLQELVSETLSAERRRLGNLLEQALDESAKAALSQLLVRDDTLSQLAALKQDAKNFGWRQMVREREKRATLEPLHAIAKTLLPKLDVSQQNLLYYASLANFYTVHDLRNLKADQTQLYLLCYAWVRYRQLSDNLVDAMAYHMKQLEDESSAGAKQSFADEQVRRQQETPRVGRLLSLYVDDSVADPTPFGEVRQRAYKIMPRDTLQTTAQRMSVKPASKLALQWQAVDGLADRMRRHLRPLYVALDLSGSNPDSPWLAALAWAKGVFAKQQRLSQRPLDEWPAATLPKRLRPYLLTFDADGKPTGLHADRYEFWLYRQIRKRLQSGELYLDDSLQHRHFSDELVEMDRKIDVLAKMEIPFLQQPVHAQLDALTAELRTQWLAFNRELKQGKLTHLEYNKDTQKLTWRKPKSENEKAREKAFYEKLPFCDVADVFRFVNDECKFLSAFTPMQPRYAKKVADADSLMAVIIAQAMNHGNHVMARTSDIPYHVLDSGYQQYLRQATLHAANDCISNAIATLPIFPYYSFDLETLYGAVDGQKFSVERPTVKARYSRKYFGRGKGVVAYTLLCNHIPLNGYLIGAHDYEAHHVFDIWYRNTSDIMPTAITGDMHSVNKANFAILHWFGRRFEPRFTDLNAQLKELYCADDPAQYQACLIRPVGKIDCDLIHREKPNIDRIVATLGLKEMTQGTLIRKLCTYTTTNPTRRAIFEFDKLIRSIYTLRYLRDPQLERNVHRSQNRLESYHQLRSAIAQVGGKKELTGRTDIEIEISNQCARLIANTIIFYNSAILSRLVTKYEAAGNSKALALITKISPAAWRHILLNGHYTFQSSGKTIDLDAIVAGLELE
13895..14920                       PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; WM47_28395; phage(gi557307612)     2.30e-44            KlebsiellapneumoniaeMLTQEQTVEIRVLARQGHSIRHIARTLGVSRNTVRRYLRDPSVARYQPREPRPTKLGPFESYLRQRVEQAHPIWLPATVLNREIRAQGYGGGLSLLRAFLATLKPARREAGPAVRFETEPGRQLQADFVVLRRARSPMSAFVATLGYSRMTFVTFVPDESFESVRDSLLLAFDYLGGVPREVLFDNMKTVVLERDAYGDGKHRFHPGLLQLADDLGFRIRLCRPYRAQTKGKVERFNRYFRESFYNPLLTRMKGTGLLLDCAAANRRVRDWLADEANVRVHATLNERPIDRWRQEREHLQPLPSRVRRDEAPLLDNSLRPVPLESLQHPLSVYDAIGEACR
14917..15696                       PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; WM47_28400; phage(gi557307613)     8.13e-78            KlebsiellapneumoniaeMNLQHERIDALCQQLKLERVATHYPVLAQQAVREDFSFTDFLEHLLRHEAGCRQQRSRELLTRMACFPGIKTLEDYDFSFNPGVPKALVQELGSLAFVERAENVVLIGPSGIGKTHLAIALGYKAAQAGVKTRFITAADLMLQLSTAQRQGRLKEYFNRAILGPRLLVIDEIGYLPFGREEANLFFQVVAKRYEKGAMILTSNLPFSQWADAFAGDTTLTAAMLDRLLHHAHILTLSGESYRLKDKRKAGVVRKNSKPE
15693..15932                       hypothetical protein; WM47_28405                                                     N/A                 KlebsiellapneumoniaeMIQVGQYYFGDSGVKWVSFQLVLTPAYPRCYLRAPIVGAWPGLPEAVRNVDAEVRRGGRPMNADLIRFSSSVIIPAVAA
15984..16865                       PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; WM47_28410; phage(gi100066)       3.32e-94            KlebsiellapneumoniaeMSLYRRLVLLSCLSWPLAGFSATALTNLVAEPFAKLEQDFGGSIGVYAMDTGSGATVSYRAEERFPLCSSFKGFLAAAVLARSQQQAGLLDTPIRYGKNALVPWSPISEKYLTTGMTVAELSAAAVQYSDNAAANLLLKELGGPAGLTAFMRSIGDTTFRLDRWELELNSAIPGDARDTSSPRAVTESLQKLTLGSALAAPQRQQFVDWLKGNTTGNHRIRAAVPADWAVGDKTGTCGVYGTANDYAVVWPTGRAPIVLAVYTRAPNKDDKYSEAVIAAAARLALEGLGVNGQ
complement(17115..18434)           PHAGE_Staphy_phiPV83_NC_002486: transposase; WM47_28415; phage(gi9635722)            7.29e-29            KlebsiellapneumoniaeMAASYLPYRPDQSYLLPPSLGEWLPEGHLAYFISETVDTLDLSAFHARYAGGGPGNQPFHPAMMVKVLIYGYASGVFSSRKLARKLYEDVALRVLAAGNFPAHRTLSDFRALHLTELENLFVQVVQLARECGLVKLGTIAVDGTKVKANASRHKAMSYKRMKPAEDELHCEIKALLDRAKATDDQERNEPELDIPAEISRREKRLEAIQAAKARLEARQREADQARGRSEDDGRRPRHPDGSDKGGGSYKREFGVPDDRDQESFTDPDSRIMKHAGGGSEQSYNGYTAVDAEHQIIVAAELTNCAADSQALLGMLAAVQANTGEMPAQTLADAGFRSEAVLAKVADHHGDVIVALGREGREDAKVNAKTHPHTAAIAAKLKTEQGDAAYRRRKSIVEAPNGWIKAVMGLRQFSMRGLDKVQAEWKLVCMALNLRRMAYL
complement(18711..19895)           PROPHAGE_Shewan_MR-1: transposase, putative; WM47_28420; phage(gi24373689)           2.31e-142           KlebsiellapneumoniaeMSIDAVFAQFFDDIPDPRQHAKIYYPFYDVLFLTVCAVIGGADGWEDIEDFGEVHLPWFQSKGLFKNGIPVHDTIARIISGIKPEPFQAAFVRWTQAINQHTEGALVAIDGKTLRSSYNREDRTSTIHMVSAYAAANKLVLGQIKTDAKSNEITAIPDLLALLDIKGCLVSIDAMGCQTEIAETILQQSGDYLLAVKGNQPKLFEAVRQALAPLAATPLCAATMTLDKAHGRIDGREYHIMAAGELAAQFPHWEQLRSIGVAISYRIEKREKITIEQRYYISSKALTRDEFARSVRGHWAIENSLHWVLDVTMGEDDCPIYRGDAAEILACIRHMGLNMLRAETSRKASIRRKQKIAGMSSEYLEKVLNGGVSGNPRKFRHSALWNFLGGWSAA
20006..20227                       PHAGE_Entero_HK022_NC_002166: IS903 transposase; WM47_28425; phage(gi9634149)        2.37e-14            KlebsiellapneumoniaeMLVMRKEGLVHWKKISGYHRRSQAETAMYRFKQLMTGKISLRTYNGQVGEVMAYVGAINKLNPLGLPVRKRRV
20399..20758                       hypothetical protein; WM47_28430                                                     N/A                 KlebsiellapneumoniaeMNKKILILTALLMSPVAVFAVDKTMPMGDHHSMSPASQELMSGMKSMHNDMMAGVMSSDPDVAFAKGMIAHHQGAIQMSETQLKFGKDPEMRKLAEDIIKAQQPEIDQMQKWVKNHEKP
20868..20879                       attR                                                                                 N/A                 CAGGGCGAGAGC
complement(21415..21798)           hypothetical protein; WM47_28435                                                     N/A                 KlebsiellapneumoniaeMKTVSGVLVYLAVCFLVFTAWLICFAQHAPFPGGEQALTLTYLLNVFFVYFLMVPFIHFFQVETYYKALMGLADGTEHIIQFYEEVPVMLIYLLSAGLTLFFYFIPLKLFFNKKLKLQLQQKQRKDI
complement(21924..22544)           PHAGE_Clostr_phiCD27_NC_011398: putative phage site-specific recombinase; WM47_28440; phage(gi209901279)     3.94e-07            KlebsiellapneumoniaeMFVFGYLRASTSEQDASRAKNALKAFANQHGHRIAGWYIDNVSGTTMNRPELIRLLGDAEPGDVILIEQVDRLTRLDDAGWETLRKQITDKQLAIVSLDLPTSHLALSSTVSDDFTRSMLKAVNGMLLDMLAAIARKDYEDRRRRQSEGISKAKAEGKYRGRVADAQKHELIRTLRLVNGKSLRETARLAGVSKMTVIRVCSSADK
complement(22633..25530)           PROPHAGE_Xantho_33913: Tn5041 transposase; WM47_28445; phage(gi21231545)             2.95e-34            KlebsiellapneumoniaeMSRRHIFTERQRAALFDLPTDELSLLKFYTLGDDDLENIRQRRRPENRIGFALQLCALRYPGRALAPGEMIPREVLSFVGAQLGVPADALLTYATRRQTRQQHMDTLREIYGYKTFTGRGARDLREWTFGQAEDARSNEDLAHRFIVRCRETSTILPAVSTIERLCADALVAAERRIETRIAENLTADVRDHLDKLLSEMLAGNISRFIWLRNFEVGNNSAAANRLLDRLEFLRTLNINHSALASIPAHRIARLRRQGERYFTDGLRDITSDRRWAILAVCVVEWEAAIADAIVETHDRIVGKTWREAKRQHDETISGSKATLTDTIRTFTALGASLLEARSDGTPLEMAVASSVAWDRLAQLVATGTQLSNTLADEPLAYVGQGYHRFRRYAPRMLRCLKLEAAPVAGPLVAAALSIGEMKGVASPERRFLRPSSKWNRHLRAQEKGDTRLWEVAVLFHLRDAFRSGDVWLAHSRRYGDLKQVLVPMIAAQENAKLAVPSNPQDWLADRKARLTIALKRLARAARNGTIPHGSIEDGTLRIDRLTADVPDGAEALILDLYRRMPSVRITDMLLEVDAALGFTDAFTHLRTGAPCRDRIGLLNVLLAEGLNLGLRKMAEATNTHDYWQLSRLARWHVESEAMNQALAIVVAAQGKLPMSRVWGMGTSASSDGQFFPTARHGEVMNMVNAKYGSVPGLKAYTHVSDQFAPFACQSIPATVSEAPYILDGLLMNEVGRHVREQYADTAGFTDHLFGASSLLGYNLVLRIRDLPSKRLYVFNPDTTPRELRKLVGGKAREDLIVANWPDIFRCAATMTAGKIRPSQLLRKLASYPRQNNLAVALREVGRIERTLFIIEWILDTDMQRRAQIGLNKGEAHHALKNALRIGRQGEIRDRTTEGQHYRIAGLNLLTAVIIYWNTVHLGHAVTERRNEGLDVPPEFLPHISPLGWAHILLTGEYLWPKEPKA

#### region 2 ####
35318..35332                       attL                                                                                 N/A                 GCTCAGGCCGGACAA
49787..50581                       PHAGE_Mycoba_Squirty_NC_026588: non-functional integrase; WM47_28580; phage(gi764159894)     5.35e-07            KlebsiellapneumoniaeMNNLVPVGSPASPGTLLPVAIDYPAALALRQMALVQDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLVPPYPFVQLATLKQRTEKAARTAGRAPAGSQVHRLVPLSDHHYVSQLQMMVATLKIPLERRNKRTGRMEKARIWEITDRTVRTWLSEAVEAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAMPEAEAVALIKKLTPNQST
complement(51328..51954)           PHAGE_Sodali_phiSG1_NC_007902: ParA-like protein; WM47_28585; phage(gi89886027)      1.10e-30            KlebsiellapneumoniaeMIIVLGSQKGGVGKSTLAVSIAAYLMSLGNRVIIVDADDQKSVLTWYNNRPEDLPHIPVTGATGNIKAMLKEHEKSYDFVIADCAGRDSAEMRSGLMAADVFISPLRPSQMDLDVVPHTCSVFTAAKDFNEDVRGYLVLNMTPTNMFVNEANQAADVLKDYPEMRLASSRVCDRKAHRDAWAESMTIFETQNDKAQQEIESLVKEVIL
complement(52571..53446)           PHAGE_Entero_P1_NC_005856: RepA; WM47_28590; phage(gi46401683)                       1.25e-110           KlebsiellapneumoniaeMNENVYIGEVIGPDCESVNNKLTVTSKATVQPVALMRLNVFVPSSRPAKGTRTSIDATSVLKDLEFSRREGYDDIRITGERLSMAIDFKVWVGIIEAFSKYGLKTNSIKLTFHEFAGMCRFESKRFDSRLRKSISEALTRIRGKTITFTRSDSEGLQKVSVTGLLKTGELDFANDLVELEADQRLWELYQTDYTVLLRHKPINALTRKEAAQALYTFIESLPTNPVPISFKRIRDRLSLLSPVKEQNRIIKLALKQLQDIGYLDHSITKKGKETFILIHRRSANLKPGTAV
complement(53858..55129)           PHAGE_Cronob_ENT39118_NC_019934: DNA polymerase; WM47_28595; phage(gi431811050)      0.0                 KlebsiellapneumoniaeMFALADVNSFYASCERVFRPDLKGKPIVVLSNNDGNVIARSAEAKPWIKMGTPWFQIKNERYPEKIYAFSSNYELYASMSARVMNCLEELAPRVEQYSIDEMFLDLTGVEHCMGLEDFGRQLRQHVYDCTRLTIGVGAGPTKTLAKSAQWASKEWKQFRGVLALTRGNPQRTRKLLSLQPVEEIWGVGNRIARKLNVLGIKTALDLALTNPAFIRKNFSVVLERTVRELNGESCLSLEEAPPTKQQIVCSRSFGVKITEYESLRQAICQHAERASEKLRKEHQYCRHISVFIKTSPFAIKEPYYGNVATEKLLTPTQDTRDIIAAATMALERIWRDGHRYAKAGVMLNDFTGSGVSQLQLFDERPPRPHSAELMRVLDGINNSGLGKVWFAGRGIAPSWQMKRDMLSPAYTTRWRDIPVARIG
complement(55129..55560)           PHAGE_Cronob_ENT39118_NC_019934: protein umuD; WM47_28600; phage(gi431811072)        5.10e-34            KlebsiellapneumoniaeMKLQLFSTGKELPPQAHPLFADLASCGFPSPAADYVESDLDLHDYCIRHPSATYYLRASGDSMADGSLYNGDLLVVDSAEKPRHGDIVVASVQGEFTVKRLLLTPRLTLQPMNASWSPIYPDPDELDIFGVVTHIIHRPREMY
55794..56765                       PHAGE_Entero_P88_NC_026014: recombinase; WM47_28605; phage(gi744692717)              1.94e-77            KlebsiellapneumoniaeMNIYCDDGSTNVKLAWFEGDELQTRVSANSFRHGWKVAEFSAATFNYQVGTLKYTWDSVSRDAIPTTNVEYQYGDLNLLAVHHALLNSGLEPQPVSLTVTLPLSEYYDGDCQRNEENIRRKRENLMRELVLNKGRAFTVTDVKVMPESLPAAFSRLAELKPGPAETTLIIDLGGTTLDAGVIVGQFDDISAVHGNPSVGVSQVTRAAAGALRAADSETSALIADTIIRNRNDRQYLQRVINDAGKIDEVRNKITEAITSLGARVTSELTAFRNVNRVFLVGGGASLIEEAIRQAWPLAPDRIEVIGDPQMALAREIALYNKED
56768..57439                       Mediator of plasmid stability; WM47_28610                                            N/A                 KlebsiellapneumoniaeMPDGQYSFYLHSDDRTDIAAMATISTISQPLRGEFIRTAATAGAVVYQVDARLPALIPVFFAGQLSAVRLCAVMALVSGTWSSLTGLPDEPENGEAALPVSPETEYQRRRYTLTLQNGRSGERVESVLTEASSRLRGDLLRNLIITGLALHTTAPELPRLLASMPVPPTSVSELQALVQQMAGTADVNRAAAAVPDTPAASAAPVSGADTREIKKNMRRAFGD
57502..57732                       hypothetical protein; WM47_28615                                                     N/A                 KlebsiellapneumoniaeMSPGFRNVLRLARIPVDSSEPVRRKFGSRLIGIVTVCLLPLLVFDVPQWVFILSQVIWGAGVYIGLSLAGDKSLNR
58169..58870                       PHAGE_Staphy_Stau2_NC_030933: hypothetical protein; WM47_28620; phage(gi100063)      9.40e-28            KlebsiellapneumoniaeMSRFILGNCIDVMRGFPDRAVDLIVTDPPYLVGFKDRQGRQIAGDVTDEWLQPATLEMYRVLKKDALMVSFYSWNRVDRFMAAWKAAGFYAVGQLVFTKNYASNRRNARARRGFVDYCHEGAYVLAKGRPVPPLKPLPDVLPFPYTGNTLHPTQKPVEALQPLIESFSAPGAIVLDPFAGSGSTCVAAYRAGRRYIGIEMLAQYHRAGTERLAAMHRAVNTPAANDEWLPEAA
58870..59091                       PHAGE_Entero_N15_NC_001901: gp50; WM47_28625; phage(gi9630517)                       6.40e-06            KlebsiellapneumoniaeMNYDGHEALRRDMAGLANNLCDLKTTLKVLEDTYHYRYDGLAERLAGISLRRLSVLMDEAFNIALMLDESFLD
59101..59520                       adenine-specific methyltransferase; WM47_28630                                       N/A                 KlebsiellapneumoniaeMYGTREDLCRMLNEQYPAETPLNLIIWTPADIEALADGMEYSFSEHDVRAVLERMDTIPEEQRLESGVSAGLVMALIDQVKENGQRVTVPVDLLETLLITAEQALWDREWTARDRNLPVPESVMRRLADTAKVRALLKS
59574..60341                       hypothetical protein; WM47_28635                                                     N/A                 KlebsiellapneumoniaeMMKKETLNTLILRHGDRMLRQAGWPDTVDMAPVAPETVPGWLAACGSLSGVEILTLTEQLCQPLTYGRAALLLASARRLAGTPARLHLFPVQAYPHPERLADCQVIRLPYAQEWLTAAECDDLLAFLKASLTQISEIVHRDTKRIAAALTPSVTPRLMDRRIGDWRLLAVEYDHDNCLDEDETDRLDQVLDAILIRDARFCPVLLTLVNEREETIRSAGVIADQLRFTDTPVRRWFDRRVLREMVREARASRTQE
61021..61449                       PHAGE_Pseudo_YuA_NC_010116: hypothetical protein; WM47_28640; phage(gi162135127)     1.37e-12            KlebsiellapneumoniaeMQYVKTCPVLNVEESDRLSFMPYLFGTDFMLAELQVYALAKKWMPGYEGGFWHFIRLPEGGGYMMPDCGRVHLVSSENWFDRTVSADAAGIILTSLAINRRLAPHHDSSNPALTRLYMLRDAQLWNHITFHPECSAIYAALD
61492..61998                       PHAGE_Rhodoc_CosmicSans_NC_028677: ArdA; WM47_28645; phage(gi966199624)              2.04e-12            KlebsiellapneumoniaeMTSSVTVPAVYVGTYHQYNGGSIFGKWFDLTDFDDEDEFYDACRALHAAEDDPEFMFQDWEGIPSQFASESSVKWAFIEAFRQAQDEGRAAAFVAWADYTGECDYDAFDEAYCGEAESEADFAYGFVEDHGLLNEVPESLRVYFDYEAYARDLFSSGYVFHEGYVFSN
75108..75122                       attR                                                                                 N/A                 GCTCAGGCCGGACAA
