Submission Results
Sequence Name: Not Available
GenBank Accession Number: 1114592582 open_in_new
GenInfo (GI) Number: 0000000000 open_in_new
Download Results: 1114592582.PHASTER.zip
gi|00000000|ref|CP018342.1| Klebsiella pneumoniae isolate Kp_Goe_154414 plasmid pKp_Goe_414-5, 63588, gc%: 51.22%
Download summary as .txt file: summary.txt file_download
Total: 1 prophage regions have been identified, of which 0 regions are intact, 1 regions are incomplete, and 0 regions are questionable.
| Region | Region Length | Completeness | Score | # Total Proteins | Region Position | Most Common Phage | GC % | Details |
|---|---|---|---|---|---|---|---|---|
| 1 | 15.2Kb | incomplete | 40 | 23 | 9109-24320 info_outline | PHAGE_Entero_P1_NC_005856(2) | 51.91% | Show info_outline |
Region DNA
>1 9109-24320 GCATTTTGAACCTCACAATTTAAATTGCCTACCCAGCCGGATTGTTGGCGCAATCCGGCACCTTTTCTGG ATTTCAATGATTCATCACCTCCTTCACATCCAGAACCAAAAAGTTATCGTTAGCGTGACGCTGCCCTACG ATGAAAACAGCATCAAAGCGACTTACTGCAACTACGTTTAGTTTGCCTGTAACCTCCTTTCCGTTGATGT TGATGGTTTCATAGAGCACCTCGTATTCCTTCGCAGAATCGGAATACTTCTGCTCTTTCCAGTTTTCTAT CTGTGCGATCAGCTCCGGGGCCAGCTGCTGACGAACACGGTTTAGTTCATAGTCACGATTGAGAATCAGG CGGTAATCTTTAATTAGCTGGTTGATAACCTTGTTCTCATCCCACTCGGATAGCAGTGGGCACTGTTCGC ACTGTATAACACCATCTTCAATCAGTTTTTCTCTGATGCCATTAACTACCTGTACAGCACTTAATTCACT GTCGTAGTTCTTTTTAATTTCTTCGCTTCCCGGATATACCATAGCGACATCATTAAAATGGCTTACGATT AATTCTGACACAATAAGGGTATAAACCTCATAAGGGTATAAGGCCGCCATAATATTCTCTCCACGTTATT TACAGAGCGTTTTAATCAATATCCACTTTTAAACTTCACGATTATTATACGTCTAATGAGCCATTGCAGG CAAGAAAAAAATGCCCCTTTTCGAGGCAAATTTTTAACCGGTTTACCACTCCCAAACGGTCAGTTCTGGC ACCTGTTCCGCATCCCGGTCAAACCAAATCCAGTCGAACCCGGCACCATTTAACGCGGCTATATTATCCA AAGCACTTGCACTGATCCCCGCCCTGGTTAATTCCACTCGCCATTGTTCAGTAGCAGAAATACGCAATAT CCACCCATAGCGATTTTTCTCGATCCAGAACAAACCTTGACCGGACAAGTCATCGTTACAGACCTTGTCC AGTAGTTCCGCGTCTTCTTTTTTTACATGGCCGGTACTGACGACCGCCACCCGATATTGTTCACTGATAT TCATACTCCCCCCTCTGGATTGGCGGCCCGCGTCCTGCGGGCCGTTCTAACTCAAATACTCACTGCGGGT AATCATTCATATCCGGGAACGGCGGTTCATCATGATTTTCAATGCCTCCCTGGCCTTCTGCACTGGTGTT ACGTGGCCCAGCTCCCGGCAGCATCTGCATTTCGCCGTTATTATCGATCACAATTTCCTTATTGCTGCGC ATTTTGCCGTCTGTCCCTTGCCATTTGTTATTACGAATGCGCCCGACAAAATACAGCATCATACCCTTTT TGAAGTACTTCCCAGCTGCTTCGGCTTTCTTTCCAAAAATGACAATATCATGCCATTCCGTTTCTTTTTG CTCCTTCCCTTCGTTGTCGCTGTAGCTGATTTCTGTAGCCAGCGTCAGGCTCGCAATGGCCGTTCTGTTT GGGGTGTAACGCACTTCTGCATCTTTGCCAGCACGCCCCATCAGAATCACTTTGTTTTCGCCACGTTTCC ACATAATACACCTCATATATTTGATGTTTATCAGTAAAAAATGGGAGGATTAAGGGGGATTTCTCCCCCT CTTTTTCAGTAAAACTTCACGTTCGATTTCAGGGCTTTTTCAAAGTCTTTTACAAAGGAATTTGCAAAAG TGTAATCACGATGAATAAGCTGTTTTGTTTTAGGATTTCGCCACTCAACCTGCACTGATTCGGCTGAGTA TTCGATCACCTCGATTTGATTTTTCACACCGAGATAATCAGCAATTGCCATTACGGCATTCACTTTTTTT TGGTCTGCTTCTTTCATTTCAACTCCTTCGCCAGTCGGGGCGCTACCGCGAAAGACTCAACTGCCTTTCG ATGTAATAATTATACGTCTAATGAGCCATTTTATCAACTCATCAGACGTATTTTTTTTATTTAATTTTGT TCAAATATGAACATCAAATGATGCCAGACATCTAACCTAATGGCTTGAATTTGGCCTTGTTGTAGGTGAT CCGGTAGTCTTTGCACTTCCCGTTCTGCCGCAGGAACTCCAGCGAGACAACGTTAGCAGCGGCAAAATTG ATGCACATAATGCTTTCCAGCGCCTCGAACAGGTCGGCTCCATTGGCAAGCGGAAACCACAGATCGTTGT CGCTACCGCTTAATTTTTCATGCAGACAGAAATGCACAGCACGCACGCCGCCAAATTCCGTAACCAGCAC CGTATTGCTGGCGCGAATATCAGTTAGTGTTAACATTTTTCCCCCTGTCAGTATTGGCCCCCTCACGGGG GCCGCCGTTTCAGTCAATCGCGCGGTAAATCAAACCGGCTTCGGCGTGCTGGTCGGCATATAATTTGAGC TTTTCCTGCTGGGTGATCAGCATGTCGCAGATGTGCTGATAGCCTTCATCATGTGCGTGCCAGATCATGT GGTTCAGGGTGAACAGGGTCAGCACGATACCGGTAGCTTCTGCGGACAGTTCCCCTTCGAACCAGTTACC GCTAACCGATACCGTGAAGCGCTCTGCGCTCAGTGGGTACATGAAGCCGCTACCGCAAGACAGTTCGACG AACTCCCAGGAACCGCCTTGATAATCGACGCAGAGAGAGCGTGCGAGGTTGTAGACACCGGCCTCACCTG TGAGATACCAGGCGCCGAACAGACGTGGCAGAAAGGCCATGCGGCGGTTATTGGGGATAATGCGTGCAGT GATGGCGGGTTGATTCAGTTCAGTAGACATTTTCTGTACTCCTGCGCCAGTCGGGGCGCTACCGTCGAAA GACCGGATTGCCTTTCGATGTGATTATTATACGTCTAATGAGCCATATTAATCAAGCAAAAAATTCCCGC CTGCCTGAATATTTTCAGGCGGGAGAACTCTTTCCCCTGTCCATTTTTGGGGGCAGGATCACGCCTGCCC CCTTCTGATTCACATGATTACTATGACTTTGTTTCAGCGTTAAAGTGTACGGCGGCGATCCTGACCAACG GGATCACCGCGCTTTCTTCATCGAGCACACGAAAATTTATCGCTTCCCCCAGGTGCATCAGGTTAGCGAT AAAATCAACGATGATTTCGGAAACCGGGTGTCCGTCGCAGTCCTGCTCATTCAGGCGCGCAAACAGCGCC AGCGCCTTAGCGGCCTTGATTGCCCGCTCTTCGTTTTCTTCGTCCATACTGCCGAAACACCATTGCCCCT TTTCAATCAGGGCCAGCGTGTCGTAATAGGCTTCATTCTGGGACATGTTTTTTCCTCCTGCGCCAGTCGG GGCGCTACCGTGAAAGTTCGCTGCGTTACTGCGTGAATTAGCCGTTAATCACCTTCGTGATGCACTCCAG CGCCTCAGACTCCTGCGGATAAAGTCGGCGTGCAGCTCCTTCACCAGACTGGATTTCTTCCAGCCGGATA AACTGCGCCGCCAGCGCCACGACTTTTTGCAGCGCCTCGGCATTGACCTCTATTTTTCGATCGCGGGCGG CATCTTCGCGCACCTGCTTTGCCAGGCTCCAGACGGTATCTTTTCCGACGCCATAACGGCTGTGTGAACT GCATTCCGCGATTTCTGCCAGAACGGCTTCGGCCTCATCGTCAGTGAGGTTCATATCACTGGTGCAGTCA TGGACATCTTCAGCAGTCCAGATCAGCAGGCTGATCCGCTGCTGTGGATCAAAACTATCGAGAAGCCTTG CGCAAATTTCATTTACGTTACCGTGCATTGTAAAACTCCTGCGCCAGTCGGGGCGCTGCCGCGAAAGACC GGATGCCTTTCGATGTGATAATTATACGTCTAATGAGCCATATTAATCAAGCGATTTTTCACGCTCATAG CTGCTACAGGCAACGCTGTAGCCGTTTGCATCCAGTTCTGAAGGCCAGTCGTCACGCCCGCAACCTGACA GCAGGCAGGCGCTGAGGTGCCCAGGGCGATAGTCGAGATGCTGGCATGAGGCGCAAAGGTCATCATCTGA GATTGAGCGGCCTGCACAGATAGGCGGCGCTCCATCAGTGGGAATTTCTCGAATATGCAGCGTTGTCACT TTTTTTACTCCTGCGCCAGTCGGGGCGCTGCCGGTTAGGGATGCAGGGGGCTGTCGCCCCCTGCGGCGGT TCAGTCCTTACCTTTATCCTTCATGACTTTAATCAGCCCGGTAATGGCTGTAATGAGGGCGGCCACGGCC GTGATAATCTGAGGGAGGTTATGGAGGATTTCAGAAGAGGTCATAATGCACCTGTAAGGCTGTTTAGGAA GGTACTGATTTGAATCAGTAAAAACATTATACGTCTAATGAGCCATATATGCAAGCAAAAAAACGCCCCG TGTAGGGGCGCTGTGATTATTTTACATACTGCCAGACATGCGGCGGGATCTTATCCCAGATGCGTCCCGA TGCCAGCTCTGCGCGGCGATGGTCGGCGGCAGCCTCAAAAGCCTCGGTGTCCTCCGGCGGCACCTGTCCA CGATCCCGCATGGATTCGTACATTTTTTCCAGTGTGTCCGGGTTACGACTGCGCCGAAAACGGAGAAGGT AAAAACGCCTCCGCGCCTGATAAACTGTTTCCGCCATGTATCTGCGTCCTGAGCGCCTTGTTATTTCGCA TAGTATTCACGTTTTGGTTGAATAAGTCTTCGACTATACGCCCCTTGCGGGGCGTAGCAGGCGGTCAGCC CCAGGTGCTGTAAAAATGGCTTTCGTTAGGATCGGTCTTATAAGCCTGTTCGTACTCGTCAATGCTGACA GACGGATGCTCATGGTTTTCACAGATGCGACGGGTCACGGGTTCGCCTTTAAAGTCGTTCAATACCGGCT TTAACTCGCCAGACATTGCACTGTCTGCTTTCACCTGCTGCGCAGCGATGCGGCGCAGTACGGCGGTTTT CTTACCGCGCAGGGCGATCACCTGATAAAAACAGGTATTTGTCTGCTCATAACCCCAGCTGGAAACAAAA ACATCACCAAGAGAAACGGAGCCGTTACGGAACTGAAGGGATTGAATAGCCATATTTATTACTCCTGCGC CAGTCGGGGCGCTACCGCGAAAAGCCTCATTGCCTTTCGATGTGATTATTATACGTCTAATGAGCCATAT TAATCAAGCAATAAATACATGCCCGGCATGATTTTTTCAGGCCGGGGAATACTTCCTTTCCCTGTTTATA TTTCAGGCCGCAAATGCGGCCTGCCGTCTGCATTACACGCGAGGGGGTAACATTCCGGGATAGTGACTGG CAACCAGATTATTGATCTTCTCAACCAGCTCCGGGCGTTTAAACGTAATGTGCGCGCTGCCCTTTTTGTA ATATCGCACGCTGAAGTAATCACACTCGAACACCTTACCGTTGAACTGGTTTTCACTGAAAAAGGCATCC AGTTTGGCACCGTCAGAAACGCGGTAATCAGGCACGTTACGCCCGTCCAGCACGTAGAACGGCCGCGCCA GATCGTCAATTTTGGTGTGCCCGTCTGAGCTGAAGCGCACCCAGCTACTGCGCCAGACATCGAGCAACGG CGCGATGATGATACGCTTGCCAAACATGCAGGGGTTATTGGTTTTATAATCCCACGACAGGGATTTAAAG ATATCAATCAGCCCTTGCGTGAAAGTATCGGCCTTGCTTGCGTTCAGGTGCCGGAACGTACTCATAACGT TCTCCAGCGTTATCGGCGGCATTTCCTCGCCTGCCACCTGCCGATCCCATTCCTGACGTTGTTTGTTGCT CATCAGCGTATACATGCCGGTTTCCGACATCAGCCGATCCCAGATTTTTCCGTCGATAACGCGGGAAATA GCCGTTTCGGCCTGGTCTGGTCTGGTGTCGCTCCATTTGATCGCGCTCTCTACGGCTTTGTCGTAGTCAT ACAGGTACTGACAGCCTCCGGCCTGCTGCATCAGATCGCGCGCTTTTCGCAGCTTGTCTATGCCGTCGAG ATAGACGCGAATACCTTCATTCCGCAACGAGATAATGCGCTCAATAGCTATGGACGGGATCACTTCACCG CCATGCTGGCAGGACATCAGATCGACCGACGGGAGAGTTTTTTCAGATGACATTTCAGACTCCTGCGCCA TGCGGGGCGCTACCGTAAGGGGTGAACAGGGCTGGCAATGCCAGCCCATCAATGATTATTTGCAGCGCTG AAGCAGTTTACTGACCTGCTCGGCCAGCGCATACGTGGACGCATACGGGCCACTTAAACGACGGTTAGGG ATTTCGTTGAGGGCATACAGGCACGCCTTCAGCAGCGCATCTTTCTGCGTTTCCAGTTCAGCTTTAAGCT GGGAGGGGGTCAGTGCTTTACTCATAATTTGTTACTCCTGCGCCAGTCGGGGCGCTACCGCGAAAAGCCT TATTGCCTTTCGATGTGATCATTATACGTCTAATGAGCCATAACAATCAAGCGTTATCTGATTAATTTTC TTTGTTTTTTCCTGAACTCCTTTCCCTGTAAATTTTGCTTTTCAGATCCCCATCAGCCCGATGAAGGTGC TTTGCCGGCATGGTGCAGGGGTTCAGGCATCAGACACTAGCGATAGCCCGAAACCCCGCAGGGGGTTCGG CGGAGCTGCCAGGCTTTGCCTGGCTAGCGGAGTGTGGCTGACGACTGCCCGACGGGCAGGAGCCGAAGGG GCCCAGAGGTGTTTTAGTACGACAGGCCAGCCAGAAAACGCCGGCAACTGAGCAGAAATGAACAGGGAAG ACACGCTGTGCGGGCGTCAAAATTAAGTTAACTTGCAGACACCAGGGCGGGATCACATCAGAAAAGGCCA GAATAGGGGGCAGGACTCGTCAAAGACATAAAAACGATGATGGGTACAGGTTTTTTAAATGCGCGCCCAG AGAGCGGCTCAGCGCGTTTCAGGGCAATACGGGTTCGATGCCCGTATTGCCCTGCAGGCGGCAACCACCG CGTCAGCCTTCAGCCCCGGCCAGATAGCGGCTTAGCCCCTCACGGGAAGCCAGCACCGACGCTCTGAACT GCGGTTCGCCGTCACCCAGCGCCTTCAGCTTCTCCACGATATTGATCATCGGCACGGCTGTGCGCTGCTT ATAACTCTCGATGTCAGCAGCATATTTCAGTAATGCCGTATCACTCGCCTCTTCAACTGGCAGATAAGCA CGCAACCACAGCGCATCTGCGAACGGGTCTATCAGCTTTTGCAGCGCTTCAGCCGTTGCTTCAAGCGCCC GCCGGTCAGTTTTAATGGTGCCAGTCTCCGGATCAACACACTTCCCTTCCCAGCACTCAGGTACAAACGA CTCCCGATAATGAAAACCGTTGTCTCCGTTTTCCGCACAGGCCAGAAGGTTCTCGATGCTTTCAGGTGTT CTGTGCCGTAACATCCTGGCCGTTGCCATACCGATCGCATTTATCATGATGCCATGCAGTCCCAGCGCCT CCTGACGGTACTCCGCAGCGATATCATCCTGGGCAATATCATTCCAGCGCATCGCCTGTGCCCAGGCAGT CCAGAGCTTTTCTGCCATATCACGCTGTTGCGTCGAGGGAATGCTGTTGGCCCGCAGGTTGAGCATTTTT TTCGTCGCATCGTTCAGTGCTTTAAAGCTGATCAGCCGTGAGCTTTTCGCCGGGACCACGTTGTGTTCAA AATCCACTGTGCCCGCCAGCCCGGTGACGGTTCGGGCCAGATGCATTGCCAGCTGGTTGACCGGATCATT GTTGTTATATGCCATACTGATCGCCGCTGCCGGTTTGCTCGCGTTGTTATTAATATCAGCGAAAAACTGC TGGCGTAACTCAAGTGGCAGGCCAACGGTAAGCAACAAGCTGATCGTATCTTCCGTATTGGAATAATCGC GTACAAATTCAAAAATACCCAGCGCACGGTGCTGGCCATCGAATAATTTTAAATCAGCGTCCATCGGAAT TTTAAGAATCCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTG GCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCG CCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTC TCAACCCGGTACGCACCAGAAAATCATTGATATGGCCATGAATGGCGTTGGATGCCGGGCAACCGCCCGC ATTATGGGCGTTGGCCTCAACACGATTTTCCGCCATTTAAAAAACTCAGGCCGCAGTCGGTAACCTCGCG CATACAGCCGGGCAGTGACGTCATCGTCTGCGCGGAAATGGACGAACAGTGGGGATACGTCGGGGCTAAA TCGCGCCAGCGCTGGCTGTTTTACGCGTATGACAGGCTCCGGAAGACGGTTGTTGCGCACGTATTCGGTG AACGCACTATGGCGACGCTGGGGCGTCTTATGAGCCTGCTGTCACCCTTTGACGTGGTGATATGGATGAC GGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAG CGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCT CAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGG AGTCATTACCAGAATCCCCACTGCCGGCGAGAGTTCGCTGGGAAGGAATTCAACATGACTATCAATATTT CCGGTAATTGACGGCAAAATATAGGGAGCTCGTTTTGATGTTGCGCCGGCAACATAATTCCGTATTTTTT TGGCCCGCGTTTTGTTCGCTTCTCGCTGGCTGCGATCCATAACATCGCCATCATTGTCCATTGCAAGAAT ACGACGTAACACGACCATAGGAACCGTCAGCATGTATTGTTCTATGCCGCCCTGTATTCCGCGTGTGGCC GGGACTCTGAAAAAATAGTTATCAGTATTCATAATATTTCCTTCGTATATCCGATACGTTCAGGAAGCAC GTTTGCGCGTCGGTGTTTTGCGCTGCTATTTCCAGATCGGCGGTAAGCCGGCATCGATGCAAAGGACGCA CCAGACGGAATACGCGATGTCACTTTCTCCGTTCACCCAGCGGCGCACCGTTCTGCCGTTCACGCCGACA TGTCGCGCCAGTCCCTCCTGACTCAGGTTGAGCACATTTTCCAGCAGATAGCGGAGTTCATCCCCCGTCG GCGGGGTCCATTTATCAGCGGGACGGAAACAGCTTTCGCGGATCGCGCCCACGTTAAGCGGCACGGTATA TTTATTGCCCATAGCAAGCCTCCAGAGCCGGCCGCACCACTGTGCGGCCGCGGTTATCAAATCAGACCAT GTTCAGCAAAAGAGTAAATATCGCTGCCGCCCACAATCAGGTGATCGAGGACTTTGACATCAACCATCCC CAGCACCTGCGCCAGACGCTCGGTGATCAGCTTGTCAGCCTGGCTGGGTGTAGTGTTAGCGGAAGGATGG TTATGCGCCAGTACCACGGCGGCGGCATTATGATGCAGGGCGCGTTGCAGGACGATACGCGGATGAACGG TGACGCTGCTGATAGTTCCCTTAAACAGTTCTTCAAACGCAATCACGCCGTTGTGGCAGTTAAGAAAGAA CGCGCAGAATGATTCGCGTGGTTCTGCAGCAAGACGAAACCGCAGTAAGGAACGCGCGGCGTCGGCGCCG GTGATAAAATCCGTTGTGGTAATTTTACCGGCAATAATGGCGTCCGCCTGGCGGATAATGTTGAGTTCTT CTGCTGAAAATTTCATATATTTCCCTCGTTAGGGGACCTGAGCACCATGCCCGGCCACAAATATATAATA GGACATTTTGTCCTAGATGTAAATACAGTGAAATATAAAAAAGCCCGATTTAACGGGCTTTTATGGTCTA TTTCTGTCCCCCTGCAATAACTTCCAGTTCCGTCTCTGAAAGCATAATTTTCAGGCAGGGTTTGGTACGG CTGAGAAGTTCAATCGACCTCGGATCGAGCTCCAGGGATTCGCAAAAATCATCTCCGCCACAGGCATCAC GCATCCGGTCCCAGAGCTCGTCAAAATCCGTTGTATCCGGATTAAAACCATTGGCGTAACAGACATTGTG CATCCCATTACTGTTTTTCTCACCTTTCGCCGCCATCACATACACGCCATGATCTTTGACAAAAAGAAGC GGGCAATTAAAACGCTTAACTTCAGCAATAACGACGTTGAGCATAGGATCAGTAAAAACAAGTTCTGATT GCATGGTCATAGTGTATTTACTCCCTGAAAGCTATTTGTTGACCGCAGCGGCGGTGAGAATGTCAGAAAG CGACCCCAGCAGATATAATTCGGTGAGCTCGCCTGTTTCATTCAGAATAAATAGCCCTGCAGGTCGGCCA TTATGAAAAATAATGGCTTCATGCGATTGATGTAATTCACACTGACACAGCGAGAAATAAATAAGTGACC ATTCAGGGGAAATAACGGTTTTATTGCCATGTTCCCGGATATAGCGGGCAACATCAGCCTGTTGCTGAGA ATTGAGAGCAGTCATAAGGTGACTCCTGCGCCGGTCGGGGCGCTACCGTCGAAAGACCGGATTGCCTTTC GATGTAATTATTATACGTCTAATGAGCCATATAAATCAAGTTAATTTTGTTATTTCCCTGGTTTAAGGAG ACTCTTTCCCCTGTAAATTTTGCATCACAAGCGCACCGTTCGGGCGCTGCAGGCGAATAATATCGTTCTG GCGAGCGTCTTTTTCCCGGATGATCCGCCAGGTTTCGGTGACGGCGCCGGCTGGCTGATACAGTCTGACC TTCACCTCGGAACGCTCTGCAGACAGCACAATGCAGCCTTTCTCATCTTGTGCAGCTGCGTGCCGGGCTT CATCTTTTTCCCGCGGACAGTCATCAAATCCTGATATTCGGACCGGGTGGCCATCGATATCAACCTGATA GCCGGGCGAAATCACGGGCACGGGCTGTGGCACATTCGGGAAATAATCAGCCAGATCACACCCTGTCAGG GCTACGGGCACAAGGCAGGCATACAGCATTAACATTCGGCGTGTGGTGATCATAAAGGGTCCTCTCTGGT CGCCGCGGGCCTTATTTCGCCTTCTCAACCAGCTGCAGTGACGGATGCTCACCGGCCAGAAGTAACAGGA AATTGAATTCCCCGGTCTTGAGCTTTACGCCGCGCTGAGCAGCCTTTTCTTTGGTCTGCCATGACGCCGG TTTATAGCCAAACAGCGCTGCAATTTCAGCGTGCTTCAGCCCCAGCGCCAGACGCAGGCGGCGAACGTCT TCGGCCGTGGCGGGATCTTTGACCATATCATCAGGACTGAATGCCCTGTTCAGGCGGTAATCAGGATGCA CGCCGGCGATCAGCATCAGCATGTTATATTCGCCTGGGCGAAGACTGGTCTTGTTGTACTGGCTGAGATC GTCGCTGATAGCTTCCTTACGCTGCCAGGCGCGCAGTTCGTACCCCATGACAGCCCCTAATGCGGTTTCA GTCATGCCCATTTTTTCCCGGAGCGTCTTCACTGTTTCCGGCTGCGGAACGACGCTAACCATCTTAATCA TTACCCTTCTCCCAGAAGTCTGAATTCAGAAAAATTTTCACCTGGCGCGTGCGGGGATAGTCCTGGTGCT TCAGCCCCTCCCGCGTGTCAGACAGGTACTGCGTTTCCTGCTGCACCTTGTTGATTTTGCCATTCCATTT GCGGGCCAGCGCCCGGTAACTCCCGTTCTCCAGCTGATAAACTTCAAACGTATACTTGTTCGGACCGCTC CAGCCTTCGTTGTAATAGACCTGTTTCATAGGATCTGCCTGATCGATGCGCCCCGTAAACATGACATCCC GGCTGCATTGCCTGAACCAGTAACCGCGGGGCATAGCCGGTGGCCGGTCGCTTATTTCCCGTCTGGATAG CGTGCCGAAAGGCTGTGAGCGCAGGTGACAACCTGATCTCAGGTCAATCTGGCATGGCGTGTTGTGCAGG GACCAGCGCCGCTGCCGCAGACAATGGCTCAGGGTGATCACAGGAACGACACGGGAAACGAACAGGGGGA ATGATTGCATGGTTTTACTCCTTCGCCAGTCGGGGCGCTACCGAAAAATGAGCCTTGATAATACGACGAA TGAGCCATATAAATCAAGTTAAAAATCAGGCGGCAGAGTTTCTGCCGCTGCTGTAGGTCAGTACCGTGGA GCCACGTCCTTTCCTTCGTCCCATAAACGGGAAAACTCGTTCACGTAGGCTTCAGTTACTGCAGGCGCGC CGCTGATCAGCACCACATTTTCCGCATTACGACTGTCTGCGCTGGCGCTGAAGTTAAACGAGCCGGTCAA TACGGCGCGGCGGTCAAAGACCATGAATTTATCATGCATGGCCTCGTAGTTATCGTTGATCCGCACCGCC ACGCGGTTATTGGCCAGAAAGTTCACTTCGGTGTACCGGTTGTCGTTCGCTTTGCGATCGGCCACCACCA CCACCGATACGCCCCGTTTTTTTGCGGCACGCAACGCGCCGGCAACAGGACGACTGGTCAGGCTGTACGC GGCAACCAGAATCTCATGCTGCGCGTGGTCGATTGAATCCAGAACCAGATTTAATGCGGTCCCGCCGGGT GAAAACCCGGTTTTCACTTCAGTCGCAGCTTGCGCCTGGACATCGCCGGCAATATTGCCGGCCGCTGTTA CCGGGTTTGCTGCCACGGCGCCGGCGATGAGGGTCAGGGTTAACAGCACATATTTTTTCACGCAGCCCCC TTAATCATCATCCGGGAACAGATGCTGGACGTTCTTACGGGTTTCTTCCAGATTCTTATCCTCCGGTGCT GCCGGTTCGGGAGCCACGGCGGGACTGTTTTCCGGCGCAGCGCCGCCTGCCGGCGACACCGTATTGCTGC CACCGCCGGTGGCCTGCAGAAACGCCTCAACCAGACGCGCCATTTCTCCTGTATCCTGCTGCGGCAGCGT ACTGCTGATGATCCGCTGAATATCCTGCATCGTGGTGCTCTCCGTCAGGAATTCAGCGATCAGGAACGGC AGGCGTTCGTCCTGCTTCATCAACGCGGCACCACAGAGCATCATGGCGCGCATCGCGCGGCCACGCTCTT TCTGAGGCAGTTTCTCAAGAAAGCCGTCGGCTACCCGGTCCGCCGCATTGCGCTCCGGGTAGATATAAAA CGAGCACTTACGGTTATCAGTCATACTCAGCCCTTCATTGCCACCATACCCAGAACCAGATCGAATTGCG GGTTATCACTGACGAAGAAACGATCGTCACTCACCCCCGTGGCCTGCTTCACTGCGCCGGCGACCAGGCT GGCACCGCCACCGACAACCATGACGTGCGTGAAGCCGGCAAAGCGGCCAACTGAATCGGTGACACGGTGC GTCAGGGCTTTTTCCCGCTCATGCAGTACCTTCATCACCTGGGCCCGCTGGTCAGCATTCTGGAGGTAAC GGGAAAGAAACGTTTCGTCATTTCGCGCCTGGATCAGACGGTCGGCAAAATACGAACTGGTACGGGTGCT CACACTGGTATCCAGTGCATGTTTTACGGCTTCGGTGATGATGGATACGCCGGTTTTAGGATCGCAATGC GTCTTGGTGAATCCGGACATTTTGCTGCGAACGTGCGCGATATCCAGCGTGGTTCCACCGATATCCACAA TCAGCAGGGAGTCCAGATCGTCCAGATCCTTCAGCACACTGAAGCCTGCAGGGACCGACTCTGGCAGTAC GCTGACTTTACGCACGGTAAAGCTCTCACGCCCCTGAACGGCCACCGCGCGCTTCACGTTCGCTTTTTTC CGCTCGATGTTGGCCATATTAGGCTGATCGTTTTCATCCAGGTACTCGCCCAGCGGCAGCGTCACCACAA CATCAACCGGCTGCGGTTCAATGCCAGACTGCATCAGGGCATGGTGGATAGCGACGACATTCACATCACT GTACTGATAGCGTGTTTCCGTGGTGCGCACGGCATCCGGGCTCAGCTGGTCAAAGCTGTACTTTTCCCCG TCAATTTCATAGTTGGCGGAAGCCGGCACCGATGAATCTGTCAGCAATGTCATGGACCATTCGGGCTTGA AGCTGTTCGGACTGATCAACGTTTTCACTGCGCCTTCTTCCATCCAGGCCAGTTTGATGTTGGTGGAACC GTCATCAACAAAAATACGCATTTTGAACCTCACATTATTTAGAAAAAAACCGTAGAAATCAGGAAAAATA CAGCTTTCAAATGGATTATTACGCATCTCTGCTGACGTGTAAAGACAAAAAGATGCACCAATATAGAAAA ATACAGAAAAATACCGAATAAAAATCAACAAAAGACGGTCAGACCGTCCTGAAAACGGTCTGACATAGAA AGAAAAGGGATTTATTTAGATTTATACGGAAATATCAGGGAGGGATACAGATTATTCCGGGAGCGTTAAA TGACTGTCTGGCAGGCTGAATCGGACGCCATACTGACGACCAACATCGAGCGCAAACACGCGCGTGTAGG TTTCTGTGGTTTCCAGCCGGGAATGCCCGGCATAAGCCTGTACAACTTTCAGCGGAACCCCATGCTGGAT CAGGTGCATACAGAAGCTGTGACGGAACGTGTGGCAGGTAACAGGGATACTAAAAGTGACAGAGTCACGT TTTGCGAGGTCCAGTGCCTTCCTGATCCAGTTACGCGGCGTGTTATCACTCTGCACCGGCCAGAGCAGCT GCTGTTTACCAATACGCAGGGTGGTCAGAAATTCACGCACCTTCCTGACATATTGAGGATCGGTCAGAGG AACAAGACGGAACACCTCTTCATCCTTGCCCGGCCTGCCGCGGCCACGCTGACGCTGTTTAAGCGTCTTC AGCCGGACAAACGGCCGGGAACCGTCAAGCTGAAAGCTGGCGCCGGTCAGCGCCAGCGCCTCATTAATAC GCGCGCCCGTGTTCCAGAGGGTATCGAAAAGGACCTGCTGGCGCAGGTCTGGCACATACCGCAGAAACAC CGACACCTCCGGGGCCAGCAGGTATTTGGGTAAATCAGCCTGGCTGGCCATCTCCCGCAGCGCCAGCGCA TCGGCATAATCGAAGTAGGCATATGTCACGCGCCCGGTCCCGATGGCGTCGCTACGTGAATTCTGGGAAA TTTGCAGGGGGAAAGTGTTCAA
Region Details
| Region | 1 |
| Region Length | 15.2Kb |
| Completeness(score) | incomplete(40) |
| Specific Keyword | transposase,recombinase |
| Region Position | 9109-24320 |
| # tRNA | 0 |
| # Total Proteins | 23 |
| # Phage Hit Proteins | 8 |
| # Hypothetical Proteins | 9 |
| Phage + Hypothetical Protein % | 73.9% |
| # Bacterial Proteins | 6 |
| Attachment Site | yes |
| # Phage Species | 7 |
| Most Common Phage Name(hit genes count) | PHAGE_Entero_P1_NC_005856(2) PHAGE_Bacill_BtCS33_NC_018085(1) PHAGE_Entero_P88_NC_026014(1) PHAGE_Pseudo_phiPSA1_NC_024365(1) PHAGE_Aeromo_vB_AsaM_56_NC_019527(1) PHAGE_Shigel_SfIV_NC_022749(1) PHAGE_Staphy_SpaA1_NC_018277(1) PHAGE_Salmon_SPN1S_NC_016761(1) PHAGE_Lactoc_bIL286_NC_002667(1) PHAGE_Bacill_phi4B1_NC_028886(1) PHAGE_Pseudo_YuA_NC_010116(1) PHAGE_Salmon_SSU5_NC_018843(1) PHAGE_Brevib_Jenst_NC_028805(1) PHAGE_Pseudo_M6_NC_007809(1) PHAGE_Marino_P12026_NC_018269(1) PHAGE_Pseudo_MP1412_NC_018282(1) |
| First Most Common Phage # | 2 |
| First Most Common Phage % | 8.69% |
| GC % | 51.91% |
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| # tRNA: | The number of tRNA genes present in the region. |
| # Total Proteins: | The number of ORFs present in the region. |
| # Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
| # Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
| Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
| # Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
| Attachment Site: | The putative phage attachment site. |
| # Phage Species: | The number of different phages that have similar proteins to those in the region. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
| First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
| GC %: | The percentage of GC nucleotides of the region. |
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Questionable (score 70-90)
Incomplete (score < 70)
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Score: | The score of the region based on the above criteria. |
| # Total Proteins: | The number of ORFs present in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| GC %: | The percentage of GC nucleotides of the region. |
Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
- If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
- If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
- If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
- If the size of the region is greater than 30 Kb, the score will be increased by 10.
- If there are at least 40 proteins in the region, the score will be increased by 10.
- If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
gi|00000000|ref|CP018342.1| Klebsiella pneumoniae isolate Kp_Goe_154414 plasmid pKp_Goe_414-5, 63588, gc%: 51.22%
Download details as .txt file: detail.txt file_download
Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File
Hits against Bacterial Database or GenBank File
Region 1, total 25 CDS
| # | CDS Position | BLAST Hit | E-Value | Sequence |
|---|---|---|---|---|
| 1 | 9109..9125 | attL | 0.0 | Showinfo_outline |
| 2 | complement(11428..11868) | PHAGE_Pseudo_YuA_NC_010116: hypothetical protein; BB788_29995; phage(gi162135127) | 5.43e-16 | Showinfo_outline |
| 3 | complement(12069..12374) | hypothetical protein; BB788_30000 | 0.0 | Showinfo_outline |
| 4 | complement(12436..12846) | hypothetical protein; BB788_30005 | 0.0 | Showinfo_outline |
| 5 | complement(12918..13133) | hypothetical protein; BB788_30010 | 0.0 | Showinfo_outline |
| 6 | complement(13465..13695) | hypothetical protein; BB788_30015 | 0.0 | Showinfo_outline |
| 7 | complement(13793..14131) | hypothetical protein; BB788_30020 | 0.0 | Showinfo_outline |
| 8 | complement(14321..15181) | PHAGE_Pseudo_phiPSA1_NC_024365: DNA restriction methylase; BB788_30025; phage(gi658307732) | 1.13e-18 | Showinfo_outline |
| 9 | complement(15254..15433) | cobalamin biosynthesis protein CbiX; BB788_30030 | 0.0 | Showinfo_outline |
| 10 | complement(16041..17012) | PHAGE_Salmon_SPN1S_NC_016761: putative bacteriophage protein; BB788_30035; phage(gi374531224) | 2.74e-44 | Showinfo_outline |
| 11 | 17086..17361 | PHAGE_Entero_P1_NC_005856: InsA; BB788_30040; phage(gi46401643) | 7.08e-63 | Showinfo_outline |
| 12 | 17280..17783 | PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; BB788_30045; phage(gi557307573) | 1.15e-118 | Showinfo_outline |
| 13 | complement(17718..18100) | PHAGE_Salmon_SPN1S_NC_016761: putative bacteriophage protein; BB788_30050; phage(gi374531224) | 2.22e-14 | Showinfo_outline |
| 14 | complement(18164..18430) | transcriptional regulator; BB788_30055 | 0.0 | Showinfo_outline |
| 15 | complement(18475..18924) | DNA repair protein RadC; BB788_30060 | 0.0 | Showinfo_outline |
| 16 | complement(19046..19408) | hypothetical protein; BB788_30065 | 0.0 | Showinfo_outline |
| 17 | complement(19430..19693) | hypothetical protein; BB788_30070 | 0.0 | Showinfo_outline |
| 18 | complement(19811..20221) | hypothetical protein; BB788_30075 | 0.0 | Showinfo_outline |
| 19 | complement(20250..20729) | hypothetical protein; BB788_30080 | 0.0 | Showinfo_outline |
| 20 | complement(20722..20967) | sugar ABC transporter substrate-binding protein; BB788_30085 | 0.0 | Showinfo_outline |
| 21 | complement(21346..21864) | endonuclease; BB788_30090 | 0.0 | Showinfo_outline |
| 22 | complement(21919..22362) | plasmid stability family protein; BB788_30095 | 0.0 | Showinfo_outline |
| 23 | complement(22365..23339) | PHAGE_Entero_P88_NC_026014: recombinase; BB788_30100; phage(gi744692717) | 2.70e-113 | Showinfo_outline |
| 24 | 23336..23352 | attR | 0.0 | Showinfo_outline |
| 25 | complement(23580..24320) | PHAGE_Bacill_phi4B1_NC_028886: site-specific recombinase; BB788_30105; phage(gi971821285) | 7.60e-06 | Showinfo_outline |
Sequence
>9109..9125
GCATTTTGAACCTCACA
Sequence
>complement(11428..11868)
KlebsiellapneumoniaeMSTELNQPAITARIIPNNRRMAFLPRLFGAWYLTGEAGVYNLARSLCVDYQGGSWEFVELSCGSGFMYPLSAERFTVSVSGNWFEGELSAEATGIVLTLFTLNHMIWHAHDEGYQHICDMLITQQEKLKLYADQHAEAGLIYRAID
Sequence
>complement(12069..12374)
KlebsiellapneumoniaeMSQNEAYYDTLALIEKGQWCFGSMDEENEERAIKAAKALALFARLNEQDCDGHPVSEIIVDFIANLMHLGEAINFRVLDEESAVIPLVRIAAVHFNAETKS
Sequence
>complement(12436..12846)
KlebsiellapneumoniaeMHGNVNEICARLLDSFDPQQRISLLIWTAEDVHDCTSDMNLTDDEAEAVLAEIAECSSHSRYGVGKDTVWSLAKQVREDAARDRKIEVNAEALQKVVALAAQFIRLEEIQSGEGAARRLYPQESEALECITKVING
Sequence
>complement(12918..13133)
KlebsiellapneumoniaeMERRLSVQAAQSQMMTFAPHASISTIALGTSAPACCQVAGVTTGLQNWMQTATALPVAAMSVKNRLINMAH
Sequence
>complement(13465..13695)
KlebsiellapneumoniaeMAETVYQARRRFYLLRFRRSRNPDTLEKMYESMRDRGQVPPEDTEAFEAAADHRRAELASGRIWDKIPPHVWQYVK
Sequence
>complement(13793..14131)
KlebsiellapneumoniaeMAIQSLQFRNGSVSLGDVFVSSWGYEQTNTCFYQVIALRGKKTAVLRRIAAQQVKADSAMSGELKPVLNDFKGEPVTRRICENHEHPSVSIDEYEQAYKTDPNESHFYSTWG
Sequence
>complement(14321..15181)
KlebsiellapneumoniaeMSSEKTLPSVDLMSCQHGGEVIPSIAIERIISLRNEGIRVYLDGIDKLRKARDLMQQAGGCQYLYDYDKAVESAIKWSDTRPDQAETAISRVIDGKIWDRLMSETGMYTLMSNKQRQEWDRQVAGEEMPPITLENVMSTFRHLNASKADTFTQGLIDIFKSLSWDYKTNNPCMFGKRIIIAPLLDVWRSSWVRFSSDGHTKIDDLARPFYVLDGRNVPDYRVSDGAKLDAFFSENQFNGKVFECDYFSVRYYKKGSAHITFKRPELVEKINNLVASHYPGMLPPRV
Sequence
>complement(15254..15433)
KlebsiellapneumoniaeMSKALTPSQLKAELETQKDALLKACLYALNEIPNRRLSGPYASTYALAEQVSKLLQRCK
Sequence
>complement(16041..17012)
KlebsiellapneumoniaeMDADLKLFDGQHRALGIFEFVRDYSNTEDTISLLLTVGLPLELRQQFFADINNNASKPAAAISMAYNNNDPVNQLAMHLARTVTGLAGTVDFEHNVVPAKSSRLISFKALNDATKKMLNLRANSIPSTQQRDMAEKLWTAWAQAMRWNDIAQDDIAAEYRQEALGLHGIMINAIGMATARMLRHRTPESIENLLACAENGDNGFHYRESFVPECWEGKCVDPETGTIKTDRRALEATAEALQKLIDPFADALWLRAYLPVEEASDTALLKYAADIESYKQRTAVPMINIVEKLKALGDGEPQFRASVLASREGLSRYLAGAEG
Sequence
>17086..17361
KlebsiellapneumoniaeMASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTIFRHLKNSGRSR
Sequence
>17280..17783
KlebsiellapneumoniaeMPGNRPHYGRWPQHDFPPFKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ
Sequence
>complement(17718..18100)
KlebsiellapneumoniaeMNTDNYFFRVPATRGIQGGIEQYMLTVPMVVLRRILAMDNDGDVMDRSQREANKTRAKKIRNYVAGATSKRAPYILPSITGNIDSHVEFLPSELSPAVGILVMTPTYCFMFRCPMTLSCSSTDFGA
Sequence
>complement(18164..18430)
KlebsiellapneumoniaeMGNKYTVPLNVGAIRESCFRPADKWTPPTGDELRYLLENVLNLSQEGLARHVGVNGRTVRRWVNGESDIAYSVWCVLCIDAGLPPIWK
Sequence
>complement(18475..18924)
KlebsiellapneumoniaeMKFSAEELNIIRQADAIIAGKITTTDFITGADAARSLLRFRLAAEPRESFCAFFLNCHNGVIAFEELFKGTISSVTVHPRIVLQRALHHNAAAVVLAHNHPSANTTPSQADKLITERLAQVLGMVDVKVLDHLIVGGSDIYSFAEHGLI
Sequence
>complement(19046..19408)
KlebsiellapneumoniaeMTMQSELVFTDPMLNVVIAEVKRFNCPLLFVKDHGVYVMAAKGEKNSNGMHNVCYANGFNPDTTDFDELWDRMRDACGGDDFCESLELDPRSIELLSRTKPCLKIMLSETELEVIAGGQK
Sequence
>complement(19430..19693)
KlebsiellapneumoniaeMTALNSQQQADVARYIREHGNKTVISPEWSLIYFSLCQCELHQSHEAIIFHNGRPAGLFILNETGELTELYLLGSLSDILTAAAVNK
Sequence
>complement(19811..20221)
KlebsiellapneumoniaeMITTRRMLMLYACLVPVALTGCDLADYFPNVPQPVPVISPGYQVDIDGHPVRISGFDDCPREKDEARHAAAQDEKGCIVLSAERSEVKVRLYQPAGAVTETWRIIREKDARQNDIIRLQRPNGALVMQNLQGKESP
Sequence
>complement(20250..20729)
KlebsiellapneumoniaeMIKMVSVVPQPETVKTLREKMGMTETALGAVMGYELRAWQRKEAISDDLSQYNKTSLRPGEYNMLMLIAGVHPDYRLNRAFSPDDMVKDPATAEDVRRLRLALGLKHAEIAALFGYKPASWQTKEKAAQRGVKLKTGEFNFLLLLAGEHPSLQLVEKAK
Sequence
>complement(20722..20967)
KlebsiellapneumoniaeMKQVYYNEGWSGPNKYTFEVYQLENGSYRALARKWNGKINKVQQETQYLSDTREGLKHQDYPRTRQVKIFLNSDFWEKGND
Sequence
>complement(21346..21864)
KlebsiellapneumoniaeMAANPVTAAGNIAGDVQAQAATEVKTGFSPGGTALNLVLDSIDHAQHEILVAAYSLTSRPVAGALRAAKKRGVSVVVVADRKANDNRYTEVNFLANNRVAVRINDNYEAMHDKFMVFDRRAVLTGSFNFSASADSRNAENVVLISGAPAVTEAYVNEFSRLWDEGKDVAPRY
Sequence
>complement(21919..22362)
KlebsiellapneumoniaeMTDNRKCSFYIYPERNAADRVADGFLEKLPQKERGRAMRAMMLCGAALMKQDERLPFLIAEFLTESTTMQDIQRIISSTLPQQDTGEMARLVEAFLQATGGGSNTVSPAGGAAPENSPAVAPEPAAPEDKNLEETRKNVQHLFPDDD
Sequence
>complement(22365..23339)
KlebsiellapneumoniaeMRIFVDDGSTNIKLAWMEEGAVKTLISPNSFKPEWSMTLLTDSSVPASANYEIDGEKYSFDQLSPDAVRTTETRYQYSDVNVVAIHHALMQSGIEPQPVDVVVTLPLGEYLDENDQPNMANIERKKANVKRAVAVQGRESFTVRKVSVLPESVPAGFSVLKDLDDLDSLLIVDIGGTTLDIAHVRSKMSGFTKTHCDPKTGVSIITEAVKHALDTSVSTRTSSYFADRLIQARNDETFLSRYLQNADQRAQVMKVLHEREKALTHRVTDSVGRFAGFTHVMVVGGGASLVAGAVKQATGVSDDRFFVSDNPQFDLVLGMVAMKG
Sequence
>23336..23352
GCATTTTGAACCTCACA
Sequence
>complement(23580..24320)
KlebsiellapneumoniaeMNTFPLQISQNSRSDAIGTGRVTYAYFDYADALALREMASQADLPKYLLAPEVSVFLRYVPDLRQQVLFDTLWNTGARINEALALTGASFQLDGSRPFVRLKTLKQRQRGRGRPGKDEEVFRLVPLTDPQYVRKVREFLTTLRIGKQQLLWPVQSDNTPRNWIRKALDLAKRDSVTFSIPVTCHTFRHSFCMHLIQHGVPLKVVQAYAGHSRLETTETYTRVFALDVGRQYGVRFSLPDSHLTLPE
Klebsiella pneumoniae isolate Kp_Goe_154414 plasmid pKp_Goe_414-5
Click on a region to see details.
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Length: 63588 bps
Phages: 1
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Click on a region in the genome above to show details here.
Click on a region in the genome above to show details here.
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Click on a sequence to see details.
Locus 1: attL (Region 1)
Locus: attLORF Start: 9109
ORF Stop: 9125
Strand: Forward
Protein Sequence: GCATTTTGAACCTCACA
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attL
Homolog/Ortholog E-Value: N/A
Locus 2: BB788_29995 (Region 1)
Locus: BB788_29995ORF Start: 11428
ORF Stop: 11868
Strand: Backward
Protein Sequence: MSTELNQPAITARIIPNNRRMAFLPRLFGAWYLTGEAGVYNLARSLCVDYQGGSWEFVELSCGSGFMYPLSAERFTVSVSGNWFEGELSAEATGIVLTLFTLNHMIWHAHDEGYQHICDMLITQQEKLKLYADQHAEAGLIYRAID
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: BB788_29995, hypothetical protein, phage(gi162135127), PHAGE_Pseudo_YuA_NC_010116
Homolog/Ortholog E-Value: 5.43e-16
Locus 3: BB788_30000 (Region 1)
Locus: BB788_30000ORF Start: 12069
ORF Stop: 12374
Strand: Backward
Protein Sequence: MSQNEAYYDTLALIEKGQWCFGSMDEENEERAIKAAKALALFARLNEQDCDGHPVSEIIVDFIANLMHLGEAINFRVLDEESAVIPLVRIAAVHFNAETKS
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: BB788_30000, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 4: BB788_30005 (Region 1)
Locus: BB788_30005ORF Start: 12436
ORF Stop: 12846
Strand: Backward
Protein Sequence: MHGNVNEICARLLDSFDPQQRISLLIWTAEDVHDCTSDMNLTDDEAEAVLAEIAECSSHSRYGVGKDTVWSLAKQVREDAARDRKIEVNAEALQKVVALAAQFIRLEEIQSGEGAARRLYPQESEALECITKVING
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: BB788_30005, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 5: BB788_30010 (Region 1)
Locus: BB788_30010ORF Start: 12918
ORF Stop: 13133
Strand: Backward
Protein Sequence: MERRLSVQAAQSQMMTFAPHASISTIALGTSAPACCQVAGVTTGLQNWMQTATALPVAAMSVKNRLINMAH
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: BB788_30010, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 6: BB788_30015 (Region 1)
Locus: BB788_30015ORF Start: 13465
ORF Stop: 13695
Strand: Backward
Protein Sequence: MAETVYQARRRFYLLRFRRSRNPDTLEKMYESMRDRGQVPPEDTEAFEAAADHRRAELASGRIWDKIPPHVWQYVK
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: BB788_30015, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 7: BB788_30020 (Region 1)
Locus: BB788_30020ORF Start: 13793
ORF Stop: 14131
Strand: Backward
Protein Sequence: MAIQSLQFRNGSVSLGDVFVSSWGYEQTNTCFYQVIALRGKKTAVLRRIAAQQVKADSAMSGELKPVLNDFKGEPVTRRICENHEHPSVSIDEYEQAYKTDPNESHFYSTWG
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: BB788_30020, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 8: BB788_30025 (Region 1)
Locus: BB788_30025ORF Start: 14321
ORF Stop: 15181
Strand: Backward
Protein Sequence: MSSEKTLPSVDLMSCQHGGEVIPSIAIERIISLRNEGIRVYLDGIDKLRKARDLMQQAGGCQYLYDYDKAVESAIKWSDTRPDQAETAISRVIDGKIWDRLMSETGMYTLMSNKQRQEWDRQVAGEEMPPITLENVMSTFRHLNASKADTFTQGLIDIFKSLSWDYKTNNPCMFGKRIIIAPLLDVWRSSWVRFSSDGHTKIDDLARPFYVLDGRNVPDYRVSDGAKLDAFFSENQFNGKVFECDYFSVRYYKKGSAHITFKRPELVEKINNLVASHYPGMLPPRV
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: BB788_30025, DNA restriction methylase, phage(gi658307732), PHAGE_Pseudo_phiPSA1_NC_024365
Homolog/Ortholog E-Value: 1.13e-18
Locus 9: BB788_30030 (Region 1)
Locus: BB788_30030ORF Start: 15254
ORF Stop: 15433
Strand: Backward
Protein Sequence: MSKALTPSQLKAELETQKDALLKACLYALNEIPNRRLSGPYASTYALAEQVSKLLQRCK
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: BB788_30030, cobalamin biosynthesis protein CbiX
Homolog/Ortholog E-Value: N/A
Locus 10: BB788_30035 (Region 1)
Locus: BB788_30035ORF Start: 16041
ORF Stop: 17012
Strand: Backward
Protein Sequence: MDADLKLFDGQHRALGIFEFVRDYSNTEDTISLLLTVGLPLELRQQFFADINNNASKPAAAISMAYNNNDPVNQLAMHLARTVTGLAGTVDFEHNVVPAKSSRLISFKALNDATKKMLNLRANSIPSTQQRDMAEKLWTAWAQAMRWNDIAQDDIAAEYRQEALGLHGIMINAIGMATARMLRHRTPESIENLLACAENGDNGFHYRESFVPECWEGKCVDPETGTIKTDRRALEATAEALQKLIDPFADALWLRAYLPVEEASDTALLKYAADIESYKQRTAVPMINIVEKLKALGDGEPQFRASVLASREGLSRYLAGAEG
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: BB788_30035, putative bacteriophage protein, phage(gi374531224), PHAGE_Salmon_SPN1S_NC_016761
Homolog/Ortholog E-Value: 2.74e-44
Locus 11: BB788_30040 (Region 1)
Locus: BB788_30040ORF Start: 17086
ORF Stop: 17361
Strand: Forward
Protein Sequence: MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTIFRHLKNSGRSR
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: BB788_30040, InsA, phage(gi46401643), PHAGE_Entero_P1_NC_005856
Homolog/Ortholog E-Value: 7.08e-63
Locus 12: BB788_30045 (Region 1)
Locus: BB788_30045ORF Start: 17280
ORF Stop: 17783
Strand: Forward
Protein Sequence: MPGNRPHYGRWPQHDFPPFKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: BB788_30045, IS1 transposase B, phage(gi557307573), PHAGE_Shigel_SfIV_NC_022749
Homolog/Ortholog E-Value: 1.15e-118
Locus 13: BB788_30050 (Region 1)
Locus: BB788_30050ORF Start: 17718
ORF Stop: 18100
Strand: Backward
Protein Sequence: MNTDNYFFRVPATRGIQGGIEQYMLTVPMVVLRRILAMDNDGDVMDRSQREANKTRAKKIRNYVAGATSKRAPYILPSITGNIDSHVEFLPSELSPAVGILVMTPTYCFMFRCPMTLSCSSTDFGA
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: BB788_30050, putative bacteriophage protein, phage(gi374531224), PHAGE_Salmon_SPN1S_NC_016761
Homolog/Ortholog E-Value: 2.22e-14
Locus 14: BB788_30055 (Region 1)
Locus: BB788_30055ORF Start: 18164
ORF Stop: 18430
Strand: Backward
Protein Sequence: MGNKYTVPLNVGAIRESCFRPADKWTPPTGDELRYLLENVLNLSQEGLARHVGVNGRTVRRWVNGESDIAYSVWCVLCIDAGLPPIWK
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: BB788_30055, transcriptional regulator
Homolog/Ortholog E-Value: N/A
Locus 15: BB788_30060 (Region 1)
Locus: BB788_30060ORF Start: 18475
ORF Stop: 18924
Strand: Backward
Protein Sequence: MKFSAEELNIIRQADAIIAGKITTTDFITGADAARSLLRFRLAAEPRESFCAFFLNCHNGVIAFEELFKGTISSVTVHPRIVLQRALHHNAAAVVLAHNHPSANTTPSQADKLITERLAQVLGMVDVKVLDHLIVGGSDIYSFAEHGLI
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: BB788_30060, DNA repair protein RadC
Homolog/Ortholog E-Value: N/A
Locus 16: BB788_30065 (Region 1)
Locus: BB788_30065ORF Start: 19046
ORF Stop: 19408
Strand: Backward
Protein Sequence: MTMQSELVFTDPMLNVVIAEVKRFNCPLLFVKDHGVYVMAAKGEKNSNGMHNVCYANGFNPDTTDFDELWDRMRDACGGDDFCESLELDPRSIELLSRTKPCLKIMLSETELEVIAGGQK
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: BB788_30065, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 17: BB788_30070 (Region 1)
Locus: BB788_30070ORF Start: 19430
ORF Stop: 19693
Strand: Backward
Protein Sequence: MTALNSQQQADVARYIREHGNKTVISPEWSLIYFSLCQCELHQSHEAIIFHNGRPAGLFILNETGELTELYLLGSLSDILTAAAVNK
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: BB788_30070, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 18: BB788_30075 (Region 1)
Locus: BB788_30075ORF Start: 19811
ORF Stop: 20221
Strand: Backward
Protein Sequence: MITTRRMLMLYACLVPVALTGCDLADYFPNVPQPVPVISPGYQVDIDGHPVRISGFDDCPREKDEARHAAAQDEKGCIVLSAERSEVKVRLYQPAGAVTETWRIIREKDARQNDIIRLQRPNGALVMQNLQGKESP
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: BB788_30075, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 19: BB788_30080 (Region 1)
Locus: BB788_30080ORF Start: 20250
ORF Stop: 20729
Strand: Backward
Protein Sequence: MIKMVSVVPQPETVKTLREKMGMTETALGAVMGYELRAWQRKEAISDDLSQYNKTSLRPGEYNMLMLIAGVHPDYRLNRAFSPDDMVKDPATAEDVRRLRLALGLKHAEIAALFGYKPASWQTKEKAAQRGVKLKTGEFNFLLLLAGEHPSLQLVEKAK
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: BB788_30080, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 20: BB788_30085 (Region 1)
Locus: BB788_30085ORF Start: 20722
ORF Stop: 20967
Strand: Backward
Protein Sequence: MKQVYYNEGWSGPNKYTFEVYQLENGSYRALARKWNGKINKVQQETQYLSDTREGLKHQDYPRTRQVKIFLNSDFWEKGND
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: BB788_30085, sugar ABC transporter substrate-binding protein
Homolog/Ortholog E-Value: N/A
Locus 21: BB788_30090 (Region 1)
Locus: BB788_30090ORF Start: 21346
ORF Stop: 21864
Strand: Backward
Protein Sequence: MAANPVTAAGNIAGDVQAQAATEVKTGFSPGGTALNLVLDSIDHAQHEILVAAYSLTSRPVAGALRAAKKRGVSVVVVADRKANDNRYTEVNFLANNRVAVRINDNYEAMHDKFMVFDRRAVLTGSFNFSASADSRNAENVVLISGAPAVTEAYVNEFSRLWDEGKDVAPRY
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: BB788_30090, endonuclease
Homolog/Ortholog E-Value: N/A
Locus 22: BB788_30095 (Region 1)
Locus: BB788_30095ORF Start: 21919
ORF Stop: 22362
Strand: Backward
Protein Sequence: MTDNRKCSFYIYPERNAADRVADGFLEKLPQKERGRAMRAMMLCGAALMKQDERLPFLIAEFLTESTTMQDIQRIISSTLPQQDTGEMARLVEAFLQATGGGSNTVSPAGGAAPENSPAVAPEPAAPEDKNLEETRKNVQHLFPDDD
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: BB788_30095, plasmid stability family protein
Homolog/Ortholog E-Value: N/A
Locus 23: BB788_30100 (Region 1)
Locus: BB788_30100ORF Start: 22365
ORF Stop: 23339
Strand: Backward
Protein Sequence: MRIFVDDGSTNIKLAWMEEGAVKTLISPNSFKPEWSMTLLTDSSVPASANYEIDGEKYSFDQLSPDAVRTTETRYQYSDVNVVAIHHALMQSGIEPQPVDVVVTLPLGEYLDENDQPNMANIERKKANVKRAVAVQGRESFTVRKVSVLPESVPAGFSVLKDLDDLDSLLIVDIGGTTLDIAHVRSKMSGFTKTHCDPKTGVSIITEAVKHALDTSVSTRTSSYFADRLIQARNDETFLSRYLQNADQRAQVMKVLHEREKALTHRVTDSVGRFAGFTHVMVVGGGASLVAGAVKQATGVSDDRFFVSDNPQFDLVLGMVAMKG
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: BB788_30100, recombinase, phage(gi744692717), PHAGE_Entero_P88_NC_026014
Homolog/Ortholog E-Value: 2.70e-113
Locus 24: attR (Region 1)
Locus: attRORF Start: 23336
ORF Stop: 23352
Strand: Forward
Protein Sequence: GCATTTTGAACCTCACA
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attR
Homolog/Ortholog E-Value: N/A
Locus 25: BB788_30105 (Region 1)
Locus: BB788_30105ORF Start: 23580
ORF Stop: 24320
Strand: Backward
Protein Sequence: MNTFPLQISQNSRSDAIGTGRVTYAYFDYADALALREMASQADLPKYLLAPEVSVFLRYVPDLRQQVLFDTLWNTGARINEALALTGASFQLDGSRPFVRLKTLKQRQRGRGRPGKDEEVFRLVPLTDPQYVRKVREFLTTLRIGKQQLLWPVQSDNTPRNWIRKALDLAKRDSVTFSIPVTCHTFRHSFCMHLIQHGVPLKVVQAYAGHSRLETTETYTRVFALDVGRQYGVRFSLPDSHLTLPE
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: BB788_30105, site-specific recombinase, phage(gi971821285), PHAGE_Bacill_phi4B1_NC_028886
Homolog/Ortholog E-Value: 7.60e-06
Lysis
Terminase
Portal Protein
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Other
Transposase
Fiber Protein
Plate Protein
tRNA
Plate Protein
tRNA
Download data as .txt file: png_input file_download