Submission Results

Sequence Name: Not Available

GenBank Accession Number: 116094265

GenInfo (GI) Number: 0000000000

Download Results: 116094265.PHASTER.zip

gi|00000000|ref|CP000413.1| Lactobacillus gasseri ATCC 33323, complete genome. 1894360, gc%: 35.26%

Download summary as .txt file: summary.txt file_download

Total: 3 prophage regions have been identified, of which 1 regions are intact, 2 regions are incomplete, and 0 regions are questionable.

RegionRegion LengthCompletenessScore# Total ProteinsRegion PositionMost Common PhageGC %Details
196.7Kbintact150126588537-685318 info_outlinePHAGE_Lactob_KC5a_NC_007924(49)36.04%Show info_outline
28.8Kbincomplete3081134650-1143516 info_outlinePHAGE_Entero_phi92_NC_023693(4)34.31%Show info_outline
312.8Kbincomplete60111470694-1483558 info_outlinePHAGE_Bacill_WBeta_NC_007734(2)42.01%Show info_outline
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Region: The number assigned to the region.
Region Length: The length of the sequence of that region (in bp).
Completeness: A prediction of whether the region contains a intact or incomplete prophage based on the above criteria.
Score: The score of the region based on the above criteria.
# Total Proteins: The number of ORFs present in the region.
Region Position: The start and end positions of the region on the bacterial chromosome.
Most Common Phage: The phage(s) with the highest number of proteins most similar to those in the region.
GC %: The percentage of GC nucleotides of the region.

Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:

  1. If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
Method 2:
  1. If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
Method 3:
  1. If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
  2. If the size of the region is greater than 30 Kb, the score will be increased by 10.
  3. If there are at least 40 proteins in the region, the score will be increased by 10.
  4. If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
Compared the total score of method 2 with the total score of method 3, the bigger one is chosen as the total score of the region.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.

gi|00000000|ref|CP000413.1| Lactobacillus gasseri ATCC 33323, complete genome. 1894360, gc%: 35.26%

Download details as .txt file: detail.txt file_download

Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File

Region 1, total 135 CDS

#CDS PositionBLAST HitE-ValueSequence
1588537..588548attL0.0Showinfo_outline
2597924..599231PHAGE_Pedioc_clP1_NC_016161: helicase; LGAS_0569; phage(gi356870769)3.70e-08Showinfo_outline
3599231..600562Cellobiose-specific PTS system IIC component; LGAS_05700.0Showinfo_outline
4600613..600685tRNA0.0Showinfo_outline
5complement(600763..601881)PHAGE_Lactob_jlb1_NC_024206: putative integrase; LGAS_0572; phage(gi971848889)0.0Showinfo_outline
6complement(602095..602718)PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0573; phage(gi971848890)2.74e-146Showinfo_outline
7complement(602783..603265)PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0574; phage(gi971848891)2.53e-111Showinfo_outline
8complement(603240..603587)PHAGE_Lactob_jlb1_NC_024206: putative XRE family transcriptional regulator; LGAS_0575; phage(gi971848892)1.78e-77Showinfo_outline
9603732..603956PHAGE_Lactob_jlb1_NC_024206: putative CI-like repressor; LGAS_0576; phage(gi971848893)3.13e-45Showinfo_outline
10603989..604324PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0577; phage(gi971848894)4.71e-75Showinfo_outline
11604293..604607PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0578; phage(gi971848895)2.65e-60Showinfo_outline
12604725..604871PHAGE_Lactob_KC5a_NC_007924: putative recombination protein; LGAS_0579; phage(gi90592583)4.60e-23Showinfo_outline
13604923..605255PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0580; phage(gi971848896)1.96e-51Showinfo_outline
14605255..606115PHAGE_Lactob_Lj771_NC_010179: hypothetical protein; LGAS_0581; phage(gi163932160)0.0Showinfo_outline
15606121..606933PHAGE_Lactob_Lj771_NC_010179: putative recombination protein; LGAS_0582; phage(gi163932161)0.0Showinfo_outline
16606943..607866PHAGE_Lactob_jlb1_NC_024206: putative replication protein; LGAS_0583; phage(gi971848899)3.04e-91Showinfo_outline
17607872..608177PHAGE_Lactob_jlb1_NC_024206: putative toxin-antitoxin system, antitoxin component; LGAS_0584; phage(gi971848900)8.27e-66Showinfo_outline
18608155..608955PHAGE_Lactob_KC5a_NC_007924: putative anti-repressor; LGAS_0585; phage(gi90592591)1.01e-165Showinfo_outline
19608970..609155PHAGE_Lactob_KC5a_NC_007924: hypothetical protein; LGAS_0586; phage(gi90592592)5.21e-34Showinfo_outline
20609165..609377PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0587; phage(gi971848902)2.51e-43Showinfo_outline
21609570..609833PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0588; phage(gi971848904)1.27e-08Showinfo_outline
22610012..610383PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0589; phage(gi971848905)2.44e-78Showinfo_outline
23610384..610707hypothetical protein; LGAS_05900.0Showinfo_outline
24610720..611181PHAGE_Lactob_jlb1_NC_024206: putative holliday junction resolvase; LGAS_0591; phage(gi971848906)4.01e-105Showinfo_outline
25611182..611403PHAGE_Lactob_Lj771_NC_010179: hypothetical protein; LGAS_0592; phage(gi163932174)9.69e-22Showinfo_outline
26611437..611604hypothetical protein; LGAS_05930.0Showinfo_outline
27611594..611884PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0594; phage(gi971848908)7.56e-24Showinfo_outline
28611887..612105PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0595; phage(gi971848909)5.47e-28Showinfo_outline
29612089..612259PHAGE_Lactob_KC5a_NC_007924: hypothetical protein; LGAS_0596; phage(gi90592601)5.00e-35Showinfo_outline
30612289..612819PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0597; phage(gi971848910)8.50e-117Showinfo_outline
31613549..613621tRNA0.0Showinfo_outline
32613677..613961PHAGE_Lactob_jlb1_NC_024206: putative ParB protein; LGAS_0599; phage(gi971848911)3.52e-45Showinfo_outline
33614213..614294tRNA0.0Showinfo_outline
34614402..615019PHAGE_Lactob_KC5a_NC_007924: hypothetical protein; LGAS_0601; phage(gi90592606)8.77e-152Showinfo_outline
35615202..615858PHAGE_Lactob_KC5a_NC_007924: putative phage terminase large subunit A; LGAS_0602; phage(gi90592608)9.55e-159Showinfo_outline
36615919..616440PHAGE_Lactob_KC5a_NC_007924: putative phage terminase small subunit; LGAS_0603; phage(gi90592609)1.62e-100Showinfo_outline
37616529..617260PHAGE_Lactob_phiAQ113_NC_019782: HNH endonuclease; LGAS_0604; phage(gi446730230)3.68e-42Showinfo_outline
38617242..618486PHAGE_Lactob_jlb1_NC_024206: putative terminase large subunit, PBSX family; LGAS_0605; phage(gi971848914)1.62e-171Showinfo_outline
39618477..619889PHAGE_Lactob_jlb1_NC_024206: putative portal protein; LGAS_0606; phage(gi971848915)0.0Showinfo_outline
40619879..621411PHAGE_Lactob_jlb1_NC_024206: putative minor head protein; LGAS_0607; phage(gi971848916)0.0Showinfo_outline
41621380..621592PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0608; phage(gi971848917)1.27e-38Showinfo_outline
42621710..622270PHAGE_Lactob_jlb1_NC_024206: putative minor capsid protein; LGAS_0609; phage(gi971848919)4.17e-129Showinfo_outline
43622270..623352PHAGE_Lactob_jlb1_NC_024206: putative major capsid protein; LGAS_0610; phage(gi971848920)0.0Showinfo_outline
44623361..623750PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0611; phage(gi971848921)4.63e-91Showinfo_outline
45623747..624109PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0612; phage(gi971848922)5.26e-85Showinfo_outline
46624106..624540PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0613; phage(gi971848923)1.35e-103Showinfo_outline
47624537..624944PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0614; phage(gi971848924)2.82e-95Showinfo_outline
48624919..625146PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0615; phage(gi971848925)1.54e-44Showinfo_outline
49625146..626501PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0616; phage(gi971848926)0.0Showinfo_outline
50626513..626983PHAGE_Lactob_jlb1_NC_024206: putative sheath tail protein; LGAS_0617; phage(gi971848927)6.73e-112Showinfo_outline
51626995..627414PHAGE_Lactob_jlb1_NC_024206: putative core tail protein; LGAS_0618; phage(gi971848928)3.37e-98Showinfo_outline
52627651..631061PHAGE_Lactob_jlb1_NC_024206: putative minor tail protein; LGAS_0619; phage(gi971848929)0.0Showinfo_outline
53631054..631743PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0620; phage(gi971848930)1.16e-165Showinfo_outline
54631740..632786PHAGE_Lactob_jlb1_NC_024206: putative late control protein; LGAS_0621; phage(gi971848931)0.0Showinfo_outline
55632765..633127PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0622; phage(gi971848932)1.70e-82Showinfo_outline
56633108..633500PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0623; phage(gi971848933)8.24e-91Showinfo_outline
57633497..634648PHAGE_Lactob_jlb1_NC_024206: putative baseplate protein; LGAS_0624; phage(gi971848934)0.0Showinfo_outline
58634638..635198PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0625; phage(gi971848935)5.42e-132Showinfo_outline
59635211..637379PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0626; phage(gi971848936)0.0Showinfo_outline
60637419..637928PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0627; phage(gi971848937)6.26e-119Showinfo_outline
61637928..638122PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0628; phage(gi971848938)1.39e-39Showinfo_outline
62638139..638498PHAGE_Lactob_Lv_1_NC_011801: holin; LGAS_0629; phage(gi219563212)6.30e-11Showinfo_outline
63638509..638787PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0630; phage(gi971848939)1.76e-56Showinfo_outline
64638784..639215PHAGE_Lactob_jlb1_NC_024206: putative LL-H family holin; LGAS_0631; phage(gi971848940)1.60e-87Showinfo_outline
65639225..640157PHAGE_Lactob_jlb1_NC_024206: putative lysin; LGAS_0632; phage(gi971848941)0.0Showinfo_outline
66640240..640371PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0633; phage(gi971848942)7.98e-24Showinfo_outline
67640741..640773attL0.0Showinfo_outline
68complement(640849..641967)PHAGE_Lactob_jlb1_NC_024206: putative integrase; LGAS_0634; phage(gi971848889)0.0Showinfo_outline
69complement(642181..642804)PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0635; phage(gi971848890)2.74e-146Showinfo_outline
70complement(642869..643351)PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0636; phage(gi971848891)2.53e-111Showinfo_outline
71complement(643326..643673)PHAGE_Lactob_jlb1_NC_024206: putative XRE family transcriptional regulator; LGAS_0637; phage(gi971848892)1.78e-77Showinfo_outline
72643818..644042PHAGE_Lactob_jlb1_NC_024206: putative CI-like repressor; LGAS_0638; phage(gi971848893)3.13e-45Showinfo_outline
73644075..644410PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0639; phage(gi971848894)4.71e-75Showinfo_outline
74644379..644693PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0640; phage(gi971848895)2.65e-60Showinfo_outline
75644811..644957PHAGE_Lactob_KC5a_NC_007924: putative recombination protein; LGAS_0641; phage(gi90592583)4.60e-23Showinfo_outline
76645009..645341PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0642; phage(gi971848896)1.96e-51Showinfo_outline
77645341..646201PHAGE_Lactob_Lj771_NC_010179: hypothetical protein; LGAS_0643; phage(gi163932160)0.0Showinfo_outline
78646207..647019PHAGE_Lactob_Lj771_NC_010179: putative recombination protein; LGAS_0644; phage(gi163932161)0.0Showinfo_outline
79647029..647952PHAGE_Lactob_jlb1_NC_024206: putative replication protein; LGAS_0645; phage(gi971848899)3.04e-91Showinfo_outline
80647958..648263PHAGE_Lactob_jlb1_NC_024206: putative toxin-antitoxin system, antitoxin component; LGAS_0646; phage(gi971848900)8.27e-66Showinfo_outline
81648241..649041PHAGE_Lactob_KC5a_NC_007924: putative anti-repressor; LGAS_0647; phage(gi90592591)1.01e-165Showinfo_outline
82649056..649241PHAGE_Lactob_KC5a_NC_007924: hypothetical protein; LGAS_0648; phage(gi90592592)5.21e-34Showinfo_outline
83649251..649463PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0649; phage(gi971848902)2.51e-43Showinfo_outline
84649656..649919PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0650; phage(gi971848904)1.27e-08Showinfo_outline
85650098..650469PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0651; phage(gi971848905)2.44e-78Showinfo_outline
86650470..650793hypothetical protein; LGAS_06520.0Showinfo_outline
87650806..651267PHAGE_Lactob_jlb1_NC_024206: putative holliday junction resolvase; LGAS_0653; phage(gi971848906)4.01e-105Showinfo_outline
88651268..651489PHAGE_Lactob_Lj771_NC_010179: hypothetical protein; LGAS_0654; phage(gi163932174)9.69e-22Showinfo_outline
89651523..651690hypothetical protein; LGAS_06550.0Showinfo_outline
90651680..651970PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0656; phage(gi971848908)7.56e-24Showinfo_outline
91651973..652191PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0657; phage(gi971848909)5.47e-28Showinfo_outline
92652175..652345PHAGE_Lactob_KC5a_NC_007924: hypothetical protein; LGAS_0658; phage(gi90592601)5.00e-35Showinfo_outline
93652375..652905PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0659; phage(gi971848910)8.50e-117Showinfo_outline
94653635..653707tRNA0.0Showinfo_outline
95653763..654047PHAGE_Lactob_jlb1_NC_024206: putative ParB protein; LGAS_0661; phage(gi971848911)3.52e-45Showinfo_outline
96654299..654380tRNA0.0Showinfo_outline
97654488..655105PHAGE_Lactob_KC5a_NC_007924: hypothetical protein; LGAS_0663; phage(gi90592606)8.77e-152Showinfo_outline
98655288..655944PHAGE_Lactob_KC5a_NC_007924: putative phage terminase large subunit A; LGAS_0664; phage(gi90592608)9.55e-159Showinfo_outline
99656005..656526PHAGE_Lactob_KC5a_NC_007924: putative phage terminase small subunit; LGAS_0665; phage(gi90592609)1.62e-100Showinfo_outline
100656615..657346PHAGE_Lactob_phiAQ113_NC_019782: HNH endonuclease; LGAS_0666; phage(gi446730230)3.68e-42Showinfo_outline
101657328..658572PHAGE_Lactob_jlb1_NC_024206: putative terminase large subunit, PBSX family; LGAS_0667; phage(gi971848914)1.62e-171Showinfo_outline
102658563..659975PHAGE_Lactob_jlb1_NC_024206: putative portal protein; LGAS_0668; phage(gi971848915)0.0Showinfo_outline
103659965..661497PHAGE_Lactob_jlb1_NC_024206: putative minor head protein; LGAS_0669; phage(gi971848916)0.0Showinfo_outline
104661466..661678PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0670; phage(gi971848917)1.27e-38Showinfo_outline
105661796..662356PHAGE_Lactob_jlb1_NC_024206: putative minor capsid protein; LGAS_0671; phage(gi971848919)4.17e-129Showinfo_outline
106662356..663438PHAGE_Lactob_jlb1_NC_024206: putative major capsid protein; LGAS_0672; phage(gi971848920)0.0Showinfo_outline
107663447..663836PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0673; phage(gi971848921)4.63e-91Showinfo_outline
108663833..664195PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0674; phage(gi971848922)5.26e-85Showinfo_outline
109664192..664626PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0675; phage(gi971848923)1.35e-103Showinfo_outline
110664623..665030PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0676; phage(gi971848924)2.82e-95Showinfo_outline
111665005..665232PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0677; phage(gi971848925)1.54e-44Showinfo_outline
112665232..666587PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0678; phage(gi971848926)0.0Showinfo_outline
113666599..667069PHAGE_Lactob_jlb1_NC_024206: putative sheath tail protein; LGAS_0679; phage(gi971848927)6.73e-112Showinfo_outline
114667081..667500PHAGE_Lactob_jlb1_NC_024206: putative core tail protein; LGAS_0680; phage(gi971848928)3.37e-98Showinfo_outline
115667581..667691hypothetical protein; LGAS_06810.0Showinfo_outline
116667737..671147PHAGE_Lactob_jlb1_NC_024206: putative minor tail protein; LGAS_0682; phage(gi971848929)0.0Showinfo_outline
117671140..671829PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0683; phage(gi971848930)1.16e-165Showinfo_outline
118671826..672872PHAGE_Lactob_jlb1_NC_024206: putative late control protein; LGAS_0684; phage(gi971848931)0.0Showinfo_outline
119672851..673213PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0685; phage(gi971848932)1.70e-82Showinfo_outline
120673194..673586PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0686; phage(gi971848933)8.24e-91Showinfo_outline
121673583..674734PHAGE_Lactob_jlb1_NC_024206: putative baseplate protein; LGAS_0687; phage(gi971848934)0.0Showinfo_outline
122674724..675284PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0688; phage(gi971848935)5.42e-132Showinfo_outline
123675297..677465PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0689; phage(gi971848936)0.0Showinfo_outline
124677505..678014PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0690; phage(gi971848937)6.26e-119Showinfo_outline
125678014..678208PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0691; phage(gi971848938)1.39e-39Showinfo_outline
126678225..678584PHAGE_Lactob_Lv_1_NC_011801: holin; LGAS_0692; phage(gi219563212)6.30e-11Showinfo_outline
127678595..678873PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0693; phage(gi971848939)1.76e-56Showinfo_outline
128678870..679301PHAGE_Lactob_jlb1_NC_024206: putative LL-H family holin; LGAS_0694; phage(gi971848940)1.60e-87Showinfo_outline
129679311..680243PHAGE_Lactob_jlb1_NC_024206: putative lysin; LGAS_0695; phage(gi971848941)0.0Showinfo_outline
130680326..680457PHAGE_Lactob_jlb1_NC_024206: hypothetical protein; LGAS_0696; phage(gi971848942)7.98e-24Showinfo_outline
131680827..680859attR0.0Showinfo_outline
132681055..682353UDP-N-Acetylglucosamine 2-epimerase; LGAS_06970.0Showinfo_outline
133complement(682387..682911)Conserved membrane protein, GtcA family; LGAS_06980.0Showinfo_outline
134complement(682892..683338)PHAGE_Lister_LP_125_NC_021781: flavodoxin; LGAS_0699; phage(gi525972663)3.70e-05Showinfo_outline
135685318..685329attR0.0Showinfo_outline

Region 2, total 8 CDS

#CDS PositionBLAST HitE-ValueSequence
1complement(1134650..1135075)PHAGE_Bacill_G_NC_023719: gp253; LGAS_1131; phage(gi593777709)2.22e-08Showinfo_outline
2complement(1136037..1137023)PHAGE_Entero_phi92_NC_023693: Phi92_gp064; LGAS_1133; phage(gi726646997)1.70e-34Showinfo_outline
3complement(1137040..1137648)PHAGE_Entero_phi92_NC_023693: Phi92_gp065; LGAS_1134; phage(gi726646998)2.67e-57Showinfo_outline
4complement(1137681..1138565)PHAGE_Entero_phi92_NC_023693: Phi92_gp066; LGAS_1135; phage(gi726646999)2.06e-121Showinfo_outline
5complement(1138572..1139654)PHAGE_Synech_ACG_2014f_NC_026927: long tail fiber distal subunit; LGAS_1136; phage(gi100279)1.21e-51Showinfo_outline
6complement(1139691..1140878)Predicted transcriptional regulator; LGAS_11370.0Showinfo_outline
7complement(1140869..1141828)PHAGE_Erysip_SE_1_NC_029078: hypothetical protein; LGAS_1138; phage(gi985758871)2.74e-33Showinfo_outline
81142545..1143516PROPHAGE_Staphy_N315: transposase; LGAS_1140; phage(gi15927655)4.42e-37Showinfo_outline

Region 3, total 11 CDS

#CDS PositionBLAST HitE-ValueSequence
11470694..1471920PHAGE_Strept_EJ_1_NC_005294: transferase; LGAS_1480; phage(gi39653711)2.33e-78Showinfo_outline
21471993..1472613hypothetical protein; LGAS_14810.0Showinfo_outline
31474513..1475778PHAGE_Klebsi_phiKO2_NC_005857: putative portal protein; LGAS_1483; phage(gi46402090)6.56e-85Showinfo_outline
41475775..1476446PHAGE_Geobac_E2_NC_009552: putative Clp peptidase; LGAS_1484; phage(gi148747731)1.03e-44Showinfo_outline
51476466..1477644PHAGE_Geobac_GBK2_NC_023612: minor capsid protein; LGAS_1485; phage(gi589893767)9.77e-44Showinfo_outline
61477939..1478322PHAGE_Clostr_phiCT19406C_NC_029006: head-tail adaptor protein; LGAS_1486; phage(gi971821549)1.19e-13Showinfo_outline
71478177..1478719PHAGE_Bacill_Fah_NC_007814: holin; LGAS_1487; phage(gi89152494)4.00e-31Showinfo_outline
81478719..1479597PHAGE_Clostr_phiSM101_NC_008265: autolytic lysozyme; LGAS_1488; phage(gi110804057)7.66e-15Showinfo_outline
91480069..1480308hypothetical protein; LGAS_14890.0Showinfo_outline
101480338..1481999PHAGE_Bacill_Fah_NC_007814: site-specific serine recombinase; LGAS_1490; phage(gi89152504)1.45e-35Showinfo_outline
111482038..1483558PHAGE_Lactob_phiPYB5_NC_027982: putative integrase; LGAS_1491; phage(gi937456185)6.39e-26Showinfo_outline
Lactobacillus gasseri ATCC 33323, complete genome
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Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)

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Length: 1894360 bps
Phages: 3
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Click on a sequence to see details.
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Lysis
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Fiber Protein
Plate Protein
tRNA

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