Submission Results
Sequence Name: Not Available
GenBank Accession Number: 1163046337
GenInfo (GI) Number: 0000000000
Download Results: 1163046337.PHASTER.zip
gi|00000000|ref|CP020062.1| Klebsiella pneumoniae strain AR_0117 plasmid unitig_1, complete 152697, gc%: 50.47%
Download summary as .txt file: summary.txt file_download
Total: 3 prophage regions have been identified, of which 0 regions are intact, 2 regions are incomplete, and 1 regions are questionable.
| Region | Region Length | Completeness | Score | # Total Proteins | Region Position | Most Common Phage | GC % | Details |
|---|---|---|---|---|---|---|---|---|
| 1 | 3.2Kb | incomplete | 60 | 6 | 11436-14664 info_outline | PHAGE_Entero_P1_NC_005856(2) | 53.08% | Show info_outline |
| 2 | 9.7Kb | questionable | 70 | 17 | 39951-49655 info_outline | PHAGE_Entero_P1_NC_005856(2) | 54.65% | Show info_outline |
| 3 | 10.5Kb | incomplete | 20 | 13 | 139463-150039 info_outline | PHAGE_Entero_P1_NC_005856(3) | 54.18% | Show info_outline |
Region DNA
>1 11436-14664 TTACTGATAGTGTTTTATGTTCAGATAATGCCCGATGACCTTGTCATACAGCTCCACCGATTTTGAGAAC GACAGTGACTTCCGTCCCAGCCTTGCCAGATGTTGTCGCAGATTCAGGTTATGTCGCTCAATGCGCTGAG TGTAACGCTTGCTGATAACGTGCAGCTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCAT CCATACCACGACCTCAAAGGCCGACAGCAGGCTCAGAAGACGCTCCAGTGTGGCCAGAGTGCGTTCACCG AAGACGTGCGCCACAACCGTCCTCCGTATCCTGTCATACGCGTAAAACAGCCAGCGCTGACGTGATTTAG CACCGACGTAGCCCCACTGTTCGTCCATTTCAGCGCAGACAATCACATCACTGCCCGGTTGTATGCGCGA GGTTACCGACTGCGGCCTGAGTTTTTTAAGTGACGTAAAACCGTGTTGAGGCCAACGCCCATAATGCGTG CACTGGCGCGACATCCGACGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGCTGAGAGGC GGTGTAAGTGAACTGTAGTTGCCATGTTTTACGGCAATGAGAGCAGAGATAGCGCTGATGTCCGGCAGTG CTTTTGCCGTTACGCACCACGCCTTCAGTAGCGGAGCAGGAAGGACATCTGATGGAAATGGAAGCCACGC AAGCACCTTAAAATCACCATCATACACTAAATCAGTAAGTTGGCAGCATTACCAATCATCTGTTCTCCAA TGACTGGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGG GGCCAGTCTAGTGATCTTGACCCTCCATCTCCGAACAGCTTTTGTATCTTAAGTTAACGATGTCCGCTGC CGCCGGTATTCCCTCGGGGAGTGATATCCCAGCGCGCTGTGCGGGTGGTTTTCATTGTAATGCGTGAACG CTACTGCAAGGTTTCGCAGTGCTGTTCTCACATCCGGTTTTGGCATGAACGCGATATAGTCTTCTTTCAT CGTTTTCACGAACCGTTCGGCCATGCCATTACTCTGCGGGCTGCTCACCGCTGTTGTGCAGGGCTCCAGA TTCAGCTCTCTCGCGAACCTCCACGTTTCATACGCGGTATACGCTGAACCGTTGTCCGTCAGCCACTGCA CCGCTGTATCGGGCAACCTGTCGCCGAAGCGCTTTTCCACCGACCTCAGCATCACATCCTGCACGGTTGA ACTGTCATAGCCTCCCGTGCTTGCTGCCCAGTCTATGGCCTCACGGTCGCAGCAGTCCAGCGCGAACGTT ACCCGCAGTTTTTCGCCGTTGTCGCAGCCGAACTCGAAGCCATCTGAACACCAGCGCATATCGCTTTCTG CCACCGCTATCTTGCCCTTATGTTCACGCTTCGGTCGCTCTGGTTTGTCATGCAACAACAACAGGTTATG CTCGCTCATTATCCTGTAGAGCCGTTTGGCGTTCACAGGTGGCTGTCCCTCTGTGCGACGTTGCTTGCGC AGGATGCCCCACACGCGTCGATAACCATAACTCGGCATATCGCTGATGATGTCGAGGATAGCCGACAGTA TTTCTTCGTCTGCTTCGTCATTACGCCGGTTACAGCGCTTGTCCTGCCAGTCGGCAGAACGGTTAATCCG CAGTGACAGCTGCGCACGCGACACGCCCATGGTGCGGCTGACCAGGGCTATTCCCCGTCCTTTGGCAACA AGGGCGCGTGCGCTATCCATTTTCGCGACTGGCCGTACTCCACGGCTTCTTTCAGGATCTCAACTTCCAT CGTCTTCTTGCCCAGAAGGCGCTGAAGTTCCCGGACCTGCTTCAGAGCAGCAGTAAGCTCAGAAGCAGGA ACGACTTCCTCTCCGGCCGCAACGGCGGTGAGGCTGCCTTCCTGATATTGCTTCTTCCACTTAAACAGCA GGCTGGGCTGGATACCATGCAGGCGGGCGACATGGGAGACATTCATGCCCGGCTCCATCGTCTGCTGGAT AATGGCGATCTTCTCCTGAGGAGTTTTACGTTTACGGGCTTCTTGCCCTAACAGGATCCCGGTCATCTCA AAATTGGCGTTAGTGTTAGACATATATTCAAGCCTATCTCTTATCTGGAGATACAGCTACTGTCCGGTGT TTCAGGGGGCTACATCATTATGGGCGTTGGCCTCAACACGGTTTTACGTCACTTAAAAAACTCAGGCCGC AGTCGGTAACCTCGCGCATACAACCGGGCAGTGATGTGATTGTCTGCGCTGAAATGGACGAACAGTGGGG CTACGTCGGTGCTAAATCACGTCAGCGCTGGCTGTTTTACGCGTATGACAGGATACGGAGGACGGTTGTG GCGCACGTCTTCGGTGAACGCACTCTGGCCACACTGGAGCGTCTTCTGAGCCTGCTGTCGGCCTTTGAGG TCGTGGTATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTTAACAG CAAGCGTTACACTCAGCGCATTGAGCGACATAACCTGAATCTGCGACAACATCTGGCAAGGCTGGGACGG AAGTCACTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAAC ACTATCAGTAAGTTGGGGTCATTACCCAGGCACAGTTAAGCAAAGAAGATCGCATTTACGTCAAAAAGTC CATTCGCTGGCTTACCCTGAAGCGACCCGGCAACCTGACGCCCGCAGAGCAAAAGGCGCTGGAGGTTGTA AAGCAGGCGATCCCAGCACTTGCCATGGCCTATGACTTCAAGGAAGCCTTCTTCTGCATCTACGACGAAC CCGACAAGCAGAGTGCTCAGAACGCCTTTGAGGCTTGGAAGAACAGCCTGCCGCCTTATGGCATGGAGCC TTTCAAAAAACTGGTAAAAACGGTACACAACCATTACGACGACATCTTTGCCTACTGGGATGCGCCGTTC TCACTCACCAATGGCTATACCGAAGGGCTCAACGGTTTGATCAAGATGTCCAACCGGTTAGGTCGGGGTT ATAGCTATGAGATCATCCGTGCAAAGACGTTGTACTCCAAAGAAGCCCGCAAGGTTGGCAGTGGTATTCG AGCAGGACGAGGCAAGGTCGAGTATGGACCGCACATTCCGACATTGTTGAAGCAGGCAGAAGGTGGAGAG TTGGATTAA
Region Details
| Region | 1 |
| Region Length | 3.2Kb |
| Completeness(score) | incomplete(60) |
| Specific Keyword | transposase |
| Region Position | 11436-14664 |
| # tRNA | 0 |
| # Total Proteins | 6 |
| # Phage Hit Proteins | 6 |
| # Hypothetical Proteins | 0 |
| Phage + Hypothetical Protein % | 100% |
| # Bacterial Proteins | 0 |
| Attachment Site | no |
| # Phage Species | 4 |
| Most Common Phage Name(hit genes count) | PHAGE_Entero_P1_NC_005856(2) PHAGE_Ralsto_RSA1_NC_009382(1) PHAGE_Shigel_SfIV_NC_022749(1) PHAGE_Pseudo_MD8_NC_031091(1) PHAGE_Burkho_Bcep22_NC_005262(1) PHAGE_Clostr_phiCD211_NC_029048(1) |
| First Most Common Phage # | 2 |
| First Most Common Phage % | 33.33% |
| GC % | 53.08% |
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| # tRNA: | The number of tRNA genes present in the region. |
| # Total Proteins: | The number of ORFs present in the region. |
| # Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
| # Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
| Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
| # Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
| Attachment Site: | The putative phage attachment site. |
| # Phage Species: | The number of different phages that have similar proteins to those in the region. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
| First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
| GC %: | The percentage of GC nucleotides of the region. |
Region DNA
>2 39951-49655 TTACATTTCAAAAACTCTGCTTACCAGGCGCATTTCGCCCAGGGGATCACCATAATAAAATGCTGAGGCC TGGCCTTTGCGTAGTGCACGCATCACCTCAATACCTTTGATGGTGGCGTAAGCCGTCTTCATGGATTTAA ATCCCAGCGTGGCGCCGATTATCCGTTTCAGTTTGCCATGATCGCATTCAATCACGTTGTTCCGGTACTT AATCTGTCGGTGTTCAACGTCAGACGGGCACCGGCCTTCGCGTTTGAGCAGAGCAAGCGCGCGACCATAG GCGGGCGCTTTATCCGTGTTGATGAATCGCGGGATCTGCCACTTCTTCACGTTGTTGAGGATTTTACCCA GAAACCGGTATGCAGCTTTGCTGTTACGACGGGAGGAGAGATAAAAATCGACAGTGCGGCCCCGGCTGTC GACGGCCCGGTACAGATACGCCCAGCGGCCATTGACCTTCACGTAGGTTTCATCCATGTGCCACGGGCAA AGATCGGAAGGGTTACGCCAGTACCAGCGCAGCCGTTTTTCCATTTCAGGCGCATAACGCTGAACCCAGC GGTAAATCGTGGAGTGATCGACATTCACTCCGCGTTCAGCCAGCATCTCCTGCAGCTCACGGTAACTGAT GCCGTATTTGCAGTACCAGCGTACGGCCCACAGAATGATGTCACGCTGAAAATGCCGGCCTTTGAATGGG TTCATGTGCAGCTCCATCAGCAAAAGGGGATGATAAGTTTATCACCACCGACTATTTGCAACAGTGCCCC CGAACGGACGTTAGATTTCGAGTTCTAGGCGTTCTGCGATGAAGGTTGGATCCCAGCCGGGATTGAAAGT GTCGACGTGGGTGAATCCGAGCCGCTCGTATAGGCCACGCAGGTTCGGGTGGCCGTCGAGCCGCAGCTTG GCGCACCCCTGCGTTCGCGCGGCATGGCGGCAAGCCTCGATCAGCGCGGAGCTGACACCCCGGCCCGCAT GTGTCCGTCGCACCGCGAGCTTGTGCAGATATGCGGCCTCCCCCTTGAGGGCGTCGGGCCAGAACTCGGG ATCCTCGGCCGACAAGGTGCAACAGCCGACGATGCCGTCGCTGCAACTCGCGACTAGGAGCTCGGATCTC AGGACGAAGGTCTCCGCGAATGTCCGGTCGATCCGCGCGACGTCCCAGGCGGGCGTTCCCTTGGCGGACA TCCACGCCGCAGCGTCGTGCATCAGCCGCACAACCTCGTCGATATCACCCGAGCAGGCGACCCGAACGTT CGGAGGCTCCTCGCTGTCCATTCGCTCCCCTGGCGCGGTATGAACCGCCGCCTCATAGTGCAGTTTGATC CTGACGAGCCCAGCATGTCTGCGCCCACCTTCGCGGAACCTGACCAGGGTCCGCTAGCGGGCGGCCGGAA GGTGAATGCTAGGCATGATCTAACCCTCGGTCTCTGGCGTCGCGACTGCGAAATTTCGCGAGGGTTTCCG AGAAGGTGATTGCGCTTCGCAGATCTCCAGGCGCGTGGGTGCGGACGTAGTCAGCGCCATTGCCGATCGC GTGAAGTTCCGCCGCAAGGCTCGCTGGACCCAGATCCTTTACAGGAAGGCCAACGGTGGCGCCCAAGAAG GATTTCCGCGACACCGAGACCAATAGCGGAAGCCCCAACGCCGACTTCAGCTTTTGAAGGTTCGACAGCA CGTGCAGCGATGTTTCCGGTGCGGGGCTCAAGAAAAATCCCATCCCCGGATCGAGGATGAGCCGGTCGGC AGCGACCCCGCTCCGTCGCAAGGCGGAAACCCGCGCCTCGAAGAACCGCACAATCTCGTCGAGCGCGTCT TCGGGTCGAAGGTGACCGGTGCGGGTGGCGATGCCATCCCGCTGCGCTGAGTGCATAACCACCAGCCTGC AGTCCGCCTCAGCAATATCGGGATAGAGCGCAGGGTCAGGAAATCCTTGGATATCGTTCAGGTAGCCCAC GCCGCGCTTGAGCGCATAGCGCTGGGTTTCCGGTTGGAAGCTGTCGATTGAAACACGGTGCATCTGATCG GACAGGGCGTCTAAGAGCGGCGCAATACGTCTGATCTCATCGGCCGGCGATACAGGCCTCGCGTCCGGAT GGCTGGCGGCCGGTCCGACATCCACGACGTCTGATCCGACTCGCAGCATTTCGATCGCCGCGGTGACAGC GCCGGCGGGGTCTAGCCGCCGGCTCTCATCGAAGAAGGAGTCCTCGGTGAGATTCAGAATGCCGAACACC GTCACCATGGCGTCGGCCTCCGCAGCGACTTCCACGATGGGGATCGGGCGAGCAAAAAGGCAGCAATTAT GAGCCCCATACCTACAAAGCCCCACGCATCAAGCTTTTGCCCATGAAGCAACCAGGCAATGGCTGTAATT ATGACGACGCCGAGTCCCGACCAGACTGCATAAGCAACACCGACAGGGATGGATTTCAGAACCAGAGAAA GAAAATAAAATGCGATGCCATAACCGATTATGACAACGGCGGAAGGGGCAAGCTTAGTAAAGCCCTCGCT AGATTTTAATGCGGATGTTGCGATTACTTCGCCAACTATTGCGATAACAAGAAAAAGCCAGCCTTTCATG ATATATCTCCCAATTTGTGTAGGGCTTATTATGCACGCTTAAAAATAATAAAAGCAGACTTGACCTGATA GTTTGGCTGTGAGCAATTATGTGCTTAGTGCATCTAACGCCTGAAATAAGCCGTGCCGCGAAGCGGCATC GGCTTGATTGAATTGTTAGACGGCAAACTCGAGCCAATACTTGTGCAGGCCAACAATATTAGACGAGCAC AGCATGGGCATTGCCGCTTTGATCTTCTCCAGTGACCAATTCCACCACTCCATCTCCAGAAGCAATGAAA TTTCCTCATCGGTGAAGCGTTTCTTAATCTTCTTAGCGGGATTGCCGCCAACGATAGCGTAAGGCTCCAC ATCTTTTGTCACCAACGAGCGGCTGCCTATCACCGCACCGTGCCCGATCTTGATTCCGGGCATGACCATT GCCTCAGAGCCGATCCAAACGTCATTGCCAATGACAGTATTACCTGCTTTTTGGAAGGCATCGAGTGCGC TTGAGAATGCAGGTTCTTCCTGCATATAAAAGAACGGGAAAGATGATGCCCAGTCGTACCGATGCCCCTG ATTGCCAGCCATGATAAAGGAAGCCCCACTCCCGATAGAGCAGAAACTACCGATGATCAACTTATCAACG TCATCACGGTCCGGAAACAGATACCGTGCGCAGTCATCGAATGAGTGCCCATGATAGTAGCCAGAGTAAT AGCTGTACCGCCCAACTTTGATATTGGGGTTCTTCACTTGCTCAGAAAGCAGCTTGCCTTTGAAGGGGCT ATCAAAGTAGTTGGTCATAAGAGATCCCGCGGTCTGTGACTTTGCCGTCTAACACCTGAGTTAAGCCGCG CCGCGAAGCGGCGTCGGCTTGGACGAATTGTTAGGCCGCATATCGCGACCTGAAAGCGGCACGCAAGACC TCAACCTTTTCCGCCCCGAGTGAGGTGCATGCGAGCCTGTAGGACTCTATGTGCTTTGTAGGCCAGTCCA CTGGTGGTACTTCATCGGCATAGTAAAAGTAATCCCAGATGATCGCCTCCCAGCTGTTACAACGGACTGG CCGCCCGGCGATGACGCCCTCAGCCGCCTCTGGGCACGAGCCCTGCGGAGCCTCCGCGATTTCATACGCT TCGTCTGCCCACCAAGCAGGTTCGCAGTCAAGTAACTCATCCCCGATCTCCGCTAAGAATCCATAGTCCA ACTCCTCCATGACGCGCCCGCCGAGCATTTCAACTATTGCCTCGAGCTCGCCGCGCCTCTCGCCGGGAAA CGTCAGATCAATATCATCGTGCTTGCGTGTTACACGCCCTAGCCGTGCATCGATCGCCCAGCCCCCACCG ATCCAGAGCGGCAGATTTCGCTCATCTGCCGCAGCTAGAATTTTGTGTATCAATGTGACCTGCGTTGTGT CCATGCGGCCTAACTTTGTTTTAGGGCGACTGCCCTGCTGCGTAACATCGTTGCTGCTCCATAACATCAA ACATCGACCCACGGCGTAACGCGCTTGCTGCTTGGATGCCCGAGGCATAGACTGTACAAAAAAACAGTCA TAACAAGCCATGAAAACCGCCACTGCGCCGTTACCACCGCTGCGTTCGGTCAAGGTTCTGGACCAGTTGC GTGAGCGCATACGCTACTTGCATTACAGCTTACCAACCGAACAGGCTTATGTCCACTGGGTTCGTGCCTT CATCCGTTTCCACGGTGTGCGTCACCCGGCAACCTTGGGCAGCAGCGAAGTCGAGGCATTTCTGTCCTGG CTGGCGAACGAGCGCAAGGTTTCGGTCTCCACGCATCGTCAGGCATTGGCGGCCTTGCTGTTCTTCTACG GCAAGGTGCTGTGCACGGATCTGCCCTGGCTTCAGGAGATCGGAAGACCTCGGCCGTCGCGGCGCTTGCC GGTGGTGCTGACCCCGGATGAAGTGGTTCGCATCCTCGGTTTTCTGGAAGGCGAGCATCGTTTGTTCGCC CAGCTTCTGTATGGAACGGGCATGCGGATCAGTGAGGGTTTGCAACTGCGGGTCAAGGATCTGGATTTCG ATCACGGCACGATCATCGTGCGGGAGGGCAAGGGCTCCAAGGATCGGGCCTTGATGTTACCCGAGAGCTT GGCACCCAGCCTGCGCGAGCAGCTGTCGCGTGCACGGGCATGGTGGCTGAAGGACCAGGCCGAGGGCCGC AGCGGCGTTGCGCTTCCCGACGCCCTTGAGCGGAAGTATCCGCGCGCCGGGCATTCCTGGCCGTGGTTCT GGGTTTTTGCGCAGCACACGCATTCGACCGATCCACGGAGCGGTGTCGTGCGTCGCCATCACATGTATGA CCAGACCTTTCAGCGCGCCTTCAAACGTGCCGTAGAACAAGCAGGCATCACGAAGCCCGCCACACCGCAC ACCCTCCGCCACTCGTTCGCGACGGCCTTGCTCCGCAGCGGTTACGACATTCGAACCGTGCAGGATCTGC TCGGCCATTCCGACGTCTCTACGACGATGATTTACACGCATGTGCTGAAAGTTGGCGGTGCCGGAGTGCG CTCACCGCTTGATGCGCTGCCGCCCCTCACTAGTGAGAGGTAGGGCAGCGCAAGTCAATCCTGGCGGATT CACTACCCCTGCGCGAAGGCCATCGGTGCCGCATCGAACGGCCGGTTGCGGAAAGTCCTCCCTGCGTCCG CTGATGGCCGGCAGCAGCCCGTCGTTGCCTGATGGATCCAACCCCTCCGCTGCTATAGTGCAGTCGGCTT CTGACGTTCAGTGCAGCCGTCTTCTGAAAACGACAAACGATGTCAGCCAATAAGTTGTTGTAATAATCGA CAAGTGTTTGTTGCAACTCGCCGTCCTGTAAGACTGCATTATCAGTCTGATTCAGGGCGGCTATGGTGTC ATTTATACACCATAAACCGATGACGGCTGCACGTAAATCTGTGGATGCTCTTGATGGCGATTCAACGTTT GCTGTCCCACGCATGGCGACAGCATTGTTTAGCCCAGCAATAATCCCATTATAAGTTGGGGGGAGGGGCT CCGACAACTGCAAAGCTATCTTTTCTGTATTGTTTTGGATGTCGTCCGCAAGAATGGTATTCTCGATCAG TTCTCGAGCCAATAATGATGTTTCGAAGCAGACGGCCAACACCGTCTGCTTCGTTTCTGGTTCTTGTTCT TCCACTGCCAGCGCGTTACTGATTGTTACGCACGTAAGTAGCAAAGTGAATGCGCTCTTGAGTCTCATCA ACGGTTGCCTCCACAGTCTCGCTGGCACTGGAATCAATGTGAAAATTGTTCTGGATCGGATCAACAGGAA TAAATCGATCACAGTCGAACTCTCTTGGAATTATGGTCATGTGCAGTTTCGTTGCTGATGAAAGAGCTTG AATGTACAACTTCTCCCCACCAATGACAGCAATGCGTTGATCGGTATTCTCATACAGGTTGATCACAGCA CGAAGATCAGGAACGACAGTAGCGCCTATGACATCTTCTTGTTTTAACGTCGAGGAGATCACGAACGATT CGCGTTCGGGGAGAATTCCTTTCTCCTTGATTCGCTCCTCGGCGCCATCCTTTTCTAACTGCATGTCACG CATGTCAGTATACGTGTGTTTCCCCATAACGCACACGCGGATCTCTTTAGAAATCCGCGTAAATCGCGCC ATGTCTTCTTTGCATTTCCATGGAATCTTGCCGCCTTTCCCGAATCCCAACTTAGAATCCACAGCGACTA TTAGCTCAAGTTGTGGGTGACTCATTAAAACTCCAAACCAGTCGATGCTGGTTGTTCCAGATATTGCTTA CGGAAGGTGGCCAGATCAATCAGTTTGATATTTGCCTTTCCGCTGTTGTTGAGATCGTGCACTTTCTTCA ATTTGCCGGAAGATCCGGAAGTGGATGCCGCGATCACCATGGTGGTCTTCGACGAGACTGATGATTGCAC TTCACCACCCTCAGCTTCAATCAGCTTCTCCAAGGCCGCGTCACGAAAACCGGTGATCACGATCTTCTCA CCGGTAAAACGATCCCCCGAAGTGACCTGCTGTTTGAACCCGATGATTGATTGAATCTTGTTGAATAGCT CGGCATGTTCAGCCATACCTGCAAGCACTTTTGCGGCAGTTTTGTAGCTGAATTTGTCGACGCTAACGAT CTGCTCTTCGGTGATGGCATTGAAATCATCCAAGGTCTTAATATCCAAGCCTTCACACAGAGCTTTCATC TTGCGGCGCCCAACGCCGCGCCCAAAGTGGGGCATCGACCCCAACCAAACCGACAGGGGAACACTACTGG GTATAGGAAGTATAAACCACCTTTTTGCTCCTCATCCGAAGTATCTTACCTGAAATTCCCTCACTCGTTT ACCGCTCAAGCCCCAATTTTAACTGCCGGTCCAGCCTAAACCGCTCTAATAAGGTTCGATTTGGCGGTAA AATCTCTAGCCTGATAGCTCGAGAGATACAAACTGCCCCACCGCCCCGTTTAAAAGTTGGCAGTGTTGAG CAGTGTTGGATTTGGGGTCGTCAGTCAAAGAGACGACTCTGTGATGGATCGAACAGGCTGGGAGTCAGTG GCGGCGCTCGTTCTGGTGGCAGCTCACGCTGCTTGGCGGCATTCGCCTTGGCTGTTTTCTGTTTCAGATG CTTGAGAATCTGCTCAATGACCTTCGGATCTTCGATGCTGGCAATCACTTTGACGTGACCGCCGCAGTGT TCGCAGACTTCAATATCAATATTGAAGACTCGCTTGAGGCGTTGCATCCAGGTCATGGCGCGGTGGCGCT CTGCAGGACTCTTGTCACGCCAGTTAGTATCGAGACCTTCCGATTTGTCGGGCTTCTTGCCCCGCTTGGC GGGTGTTACTTGAACTCGGTGTTTGCTGTTCGGTGCAAAGACGCCGTGGAAGCGTGTGAGGTTGACTCGC GGCTTAGGTACCAACGCAGCGAGTTTGGCGATGAAGTCCAGCGGCTCGAAGATCACATGGGTGGTGCCAT TGCGGTACGGAGTTTTGAGCTCGTAACGCACCTGCCCATTGGCGGTTAATGCCAGACGTTTTTCTGAAAC CGCTGGCCGACTAATGTAGCGACACAAGCGCTCAAGCTTATCCCGCTGATGCGCTTCGGCCATCACACCG GCGTGTAGCGAGAAACCAGCATGGTTGGCTACTCGACTGCTTGAGTCGGCTTTATCCTCACGCCCTGGCA AGGTTTGCAGGGTGAAGACTTTGCGCCCTTGCTGGGGGCCGACGGCAATGCGATACGTAACCGAAGCACC ATGTAATTGAGTCAGCGTATCGTCTTCGCCCTCTTCCAGTGTCAACCACGTATTCTCGGCATCACGCTCC AAAATCCCACGCTTTTCCATGCAGCGAGCGATGCGATGGCTGAGGGGGTGATGCTGCCAACTTACTGATT TAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCT ACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTA AAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCACCAGAAAATCATTGATATGGC CATGAATGGCGTTGGATGCCGGGCAACCGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTCCGCCAT TTAAAAAACTCAGGCCGCAGTCGGTAACCTCGCGCATACAGCCGGGCAGTGACGTCATCGTCTGCGCGGA AATGGACGAACAGTGGGGATACGTCGGGGCTAAATCGCGCCAGCGCTGGCTGTTTTACGCGTATGACAGG CTCCGGAAGACGGTTGTTGCGCACGTATTCGGTGAACGCACTATGGCGACGCTGGGGCGTCTTATGAGCC TGCTGTCACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGG AAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCAC CTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGC ATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGGTTGCCCCTGCTTGCATATACCCGA CATGAAAAATTCATGCCATTTTTAAAGCACAGTTAAATCAATGGATTATTTATTTTTGGAGACACTTTTG CACCAATGGGATGCGGCTTGCTCAGTTATGGTGCAATTTTCTGATGCAGTCTGGTCTCTTCAACATGAGG TGGAGTAATGCACACCTGTTTTAGTTCCACGCACTTTTTGAGAGTTCCGGTTTTTCAGCCATCAGCAGGT GATCCTCCGGCGTCAGGTTATTCAGGGATTCATGGGGACGCTCTGGATGGAAGATCCTCGTGACGAAGCC GAATTTGCCCCCGGCCACGTGCTTTTTTTCGAGCGTAATGTTGTCCATGCATTACCAACCCTTCTTGAAG AACCCGTAATATTTCTGTCATTGGCCAGCCCTCGTCGTGATCCTGAAGATATTACCTTTGTTGACCCGAA AGATGGCACTGCCAGAACCTTTATGGCCAGAAATAATGAGTCAGCATAAAGGGCCAGAACCAAAGGTAAG GTGGAGCGGATGGTGAAATACCTCAAGGAGAACTTCTTCGTCCGGTACCGCCGGTTCGACAGCTTCGCCC AGGTTAATCAGCTACTGGAGCAGTGGATGGCTGACGTTGCCGACAGGCGGGAACTTCGCCAGTTCAGGCA GACACCGGAACAGCGCTTCACGCAGGAACAGGAGCATCTGCAGCCGTTGCCGGATACGGACTTCGATACC AGCTACTTCGATATCCGTCATGTCTCCTGGGATGGCTATATCGAGGTTGGCGGAAACCGTTACAGCGTGC CGGAAAGCCTGTGTGGCCAGCCGGTATCAATACGGATCTCGCTGGATGATGAACTGCGGATCTACAGTAA TGAGCAGCAGATGGCATCGCACCGTCTCTGTTCGGCTGCATCCGGCTGGCAGACCGTGCCGGAGCATCAC GCCCCGCTCTGGCAGCAGGTCAGTCAGGTGGAACCCGAAATCTGA
Region Details
| Region | 2 |
| Region Length | 9.7Kb |
| Completeness(score) | questionable(70) |
| Specific Keyword | transposase,integrase |
| Region Position | 39951-49655 |
| # tRNA | 0 |
| # Total Proteins | 17 |
| # Phage Hit Proteins | 8 |
| # Hypothetical Proteins | 1 |
| Phage + Hypothetical Protein % | 52.9% |
| # Bacterial Proteins | 8 |
| Attachment Site | no |
| # Phage Species | 8 |
| Most Common Phage Name(hit genes count) | PHAGE_Entero_P1_NC_005856(2) PHAGE_Staphy_SPbeta_like_NC_029119(2) PHAGE_Mycoba_Shipwreck_NC_031261(1) PHAGE_Acinet_Acj9_NC_014663(1) PHAGE_Acinet_Acj61_NC_014661(1) PHAGE_Bacill_AR9_NC_031039(1) PHAGE_Bacill_Moonbeam_NC_027374(1) PHAGE_Mycoba_Charlie_NC_023729(1) PHAGE_Shigel_SfIV_NC_022749(1) PHAGE_Bacill_Eldridge_NC_030920(1) PHAGE_Mycoba_Malithi_NC_026605(1) PHAGE_Vibrio_PWH3a_P1_NC_020863(1) PHAGE_Ralsto_RSL1_NC_010811(1) PHAGE_Brevib_Jenst_NC_028805(1) PHAGE_Bacill_Mater_NC_027366(1) PHAGE_Mycoba_Butters_NC_021061(1) PHAGE_Vibrio_qdvp001_NC_029057(1) PHAGE_Pseudo_Lu11_NC_017972(1) PHAGE_Entero_fiAA91_ss_NC_022750(1) PHAGE_Acinet_ZZ1_NC_018087(1) |
| First Most Common Phage # | 1 |
| First Most Common Phage % | 11.76% |
| GC % | 54.65% |
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| # tRNA: | The number of tRNA genes present in the region. |
| # Total Proteins: | The number of ORFs present in the region. |
| # Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
| # Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
| Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
| # Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
| Attachment Site: | The putative phage attachment site. |
| # Phage Species: | The number of different phages that have similar proteins to those in the region. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
| First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
| GC %: | The percentage of GC nucleotides of the region. |
Region DNA
>3 139463-150039 TCAATTCTGCTGATCATCGCCCGGTTTATTATATTCGGGTGCATTTGCGCGCGGCAGCTGCTGACTGTTC AGTCGATGTACGCGGAACCGTTCATGGAAATATTCGCGCAGGTGTTCAGGCTGTTCCCGTTCAACAAGTT CCGGCATGACGGGCTTGTTCATGCGCTCCTGCCAGGCAACATCAGCAGCCACCTTATCGACGGCAACTTT GTCCTGCTCCTCCTTTGAAAAAGAGGCAATATTCCACTGCGACATACGCAAATTCAGCAAAAGAAGAAAA GGTACGCAGATATTACGCTCTTAATCCTTAACTGGCGACCTGTTGAGGTGAGGCCAGTACGCAGCGCCGC AGGTGTGGCGAACCGCCTCACCGGCAGGCGAAGCCTGCCAGGATTTTCGCGCGGCCGCACCGATCTGCAA AGCCGGGTAAGCTCCTCACAGATCGTGCCGTCTCAGACCTTAAACGGGGCGTCGGGCGCCCCGATATAGT ATCAGTCCAGAGCCGCGTAAATAGCAGCGCATTCGTCATGAGAGTCAATGAAATTCCACAGCTGCGATTC CCGCAGCATCAGGTGGCGTGTCAGGGCAGCATCACCGCGTTCATGGTGCAGCCAGATACGGCGGTTGATC GCCAGCGCCGTAATGATAACTCCGGCCGCATCCGCGCTGACGGACCGATCAAACCAGTTATCCGGGTTAG TCAGATGGAAACGGTCACCGTCAGGCATCATGTAGCCGCCGCCCTCCGGAATACGGATGAAATGCCAGAA GCCTCCGCAGTAATCGGTGATGTGTTTCTCAGCGAGCGCATAGACCTGCATCTCTCCGGCCAGAAAATCG TTACCAAACAGATCCGGCAGGAACGAGAGACGGTCGGACTCCTCTACATTCAGCATGGTTTGACGGGCAT GATACATAGCAACCTCCACAGGTTCATAAGATTGCGGCACCGGGTTGTGCCGTGCCGACACGACAGCCCG GCGGAAAGCGGAAGATGCAAGGGCGACACCGGAGGCCGCAGCGCAGATAAAGCACGAAGCTGGTCTGGAC GGTTTTAGAGCGAAACCTGAGCGAGAAAACGACGGGAAGAACGGCGAGCTTCATAAAAAAACTGCGACCG GGCGAGGATGGCGGCGCCAGCGAACCCTTGCATCTGCAGCGGCCGGGCTAAAGTGAAGGCACGGCACTAC CCGAAGCGATGCAGGAGATACAACATGAGGTCCCCTGTCGCGGTTTACGAGCGCAGGGAGAAAAGCAGAA GCTGGCATCGCGACGCGATGGCTGCGTATAAAGGCCGCAGACCGGAGGGAGGGGGCCGGACAAAGCGGAG CCGGCGGCAAAGACAAGCCGGCGACGTCCTTATCCGGTGTTGATGGCATGGCGCCAGTTTATCAGCTGCC CGTCACCAGGCGGCCCGGGAGACCTCTCGTTCTGAGCTTATCGGCGATCTGGTTTATCACTGGCCACGGA GATACCAATGTACATACCGCTTCCCCAGATAATCTGAGAGAGCACAAATAGCCACAGAGGGACGTCAACA ATCAACAGCGGAAGAAGAGCAACCGTCACGATTAAAATCAGGCGGCTACCGAATTGCCGGCGCACCGGTT CAGCGGCGTCAACCGGGACGCCTGCATATCGCAGAACCTGCCTTAAACCCGTATTCATAATCACTCCACT CAGAATAAATGCACTGTACTTCAGTATATTACATTTTATTAGATAACGATTCTCCGGACTGGCAGCGATC CTTCTGAAATTTCCCTGTTTTTGCAGGAACAGCAAATGGTTACAGACAACGGCAACAAGATGACTTGAAT AAAAACGGCCTCCGCAAAATAATGTCGCGGTAGGGATACCCGTTACCGGATACCCCCCGCACAGATCCCG GCGTGCGCGATTTACGCACCGGGCTCCTGCCTCGGGTGTCTGGCGGTGAACCGCTCCACAGGCCATGGAT GAAGAACCCGAACCCTTGGTAGCCATGCGGCTGCCAGTTTGTTTGCTTTCGTCCAGGTCGTATCATCCTT CTGGCTCCTGCGCCTGAGCGCCCGGCGCCAGAGGTTTGTTACGTGTGTCCTGAACTTCTGCATGGTGGGG AAGTTGCCCGGTACCGAGTGATAGTTCAGGTATCCCTGAACCACTCTCCTGAGCCATTTTCCCTGTTCGG GGATTGAGTAATGCCAGCGCCTTCGCAGACCGTCTTTGATGGCTTTCAGAGTTGCCGTCATCCGATCCCG GCGGGTCTTTCGTATCAGCATGAACCTGCCGTTGCGATCTTTCCCGCTGATGTGCGTGAACCCGAGGAAG TTGAACGTTTCTGGTTTGCCTTTTCCCCTGATGGCACGGTTTTCGGCAGCGAAGCGGCCGAACTCCATCA GACGGGTTTTCTCCGGGTGAACCGTGAGTCCGAACTCCCTCAGTCTGCGCTGCATGGCTATACGGAAGCG CCGGGCATCGTATCGTTTGTCGAACCCGATGACGATGTCATCGGCGTATCTGACCATTACCACATTGCCT GTGGCATAGCGACGTCGCCACTGATGCGCCCACAGATCGAAGACGTAGTGGAGGTATATGTTTGCCAGCA GCGGTGAGATGACCGCACCCTGTGGGGTGCCTTCCTCCGTTGCTCGCCATTGACCCTCCTCCGACGTCCC GGCTGTGAGCCACTTACGTATGAGCCTGATTACCCTCCGGTCGCCGATCCGATGCTCTGTGAACCTGATC AGCCATTCGTGGCTCACCCTGTCGAAGAACTGACTGATGTCGGCATCCAGTACCCAGTTTACGTTAGTGC GTACCAGCCCTGTGGCCAGTGCGTCCAGTGCATCGTGCTGGCTTCGCCCGGGTCTGAACCCGTATGAGAA CCCCATAAAGTCGTTTTCATAGACTGCGTTCAGGATTTTCACCAGCGCATACTGGACGATCTTGTCCTCC AGCGAGGCGATGCCGAGCGGGCGTTGTTTTCCATCCGCTTTTGGGATGTAGTGACGCCTGCCGGGCTGCG CCCTGTAGCTGCCCTGATGTAGCCTCCGGTGCAGATCTGTTATGTTGTTCTTCATGTTTCCGGCGTAGTC CATCCACCTGATGCCATCCACTCCGGCGGCCGCTTTCCTGCTCAGGGAGAGGAATGCGGCTTCCAGTGCT TCGACTGTCAGCAGGTGGAACAATGCTGTAAACCGTTCTTTCTTCCGCTGCTTCGCAGCTTCCCGCACGC GTGACAGCCTCTGTGACATGCTTTCCCGGCTCTGTGTCCGGCGCATGTGTGGCTGTTCCGCGTTCCCCTT GGCCCCGCTCCTTCGCTCCACTGACTCCGCTCCTTTCGGGTTGTTCGCCTGCTTCGCCGCTACTATGAGC GAGTCCGACTTCTCCTCTCCGTACATCACCGGCTATGACTCCTCGTCTTCCCGGTGCGGGCCATCTCCGA CACTGGCAGATGGTCAGAGGGGAGATCTCCCGGTTCCCGCGTAGAGATCGTATTGACATGCCAGGGTCTC AGACCCCGCCGGGTCCATGTGGCACTCGCAGTATCGCACCCTATGATGTTGCCTTCCGTTAACAGTACAA CGTCGGCACCCGGTAATTTAATATACATTTCGTGGCTCAATGGCTGGCCTGTCAACACCCCTGTCAACGC TTCGCCCCATACCTCGCGGTATGCAACGCATGACTCGGGGACCTTGTGGATTGCTGGTCCTTCAATGGTC GGGGACTTTCACCCCTTGATCTCTAACCGGTCTCCCGGCGCACACTGTATATATATACAGCTTTAAGCGA GGAAAAAAACGATGAAGTTCATTCCTGCAGTATCAGAAGCCAGCATAGTAAAAATTCCTTTGTTCACAGA GCGATGCCCTGCGGGTTTTCCGTCACCGGCATCAGACTACACTGAGTCTGAACTGGATCTGAATGAGTAC TGCATTCACCGGCGCCACTCCACCTATTTTGTCAGGGCGATTGGCAACTCAATGACTGATATTGGCCTCT ATTCCGGCGATCTGTTGGTCGTGGATAAAGCAGAACAGCCGCGGCACGGGGATATTGTTATCGCGGAAAT TGAGGGTGAATTTACGGTAAAACGCCTGCTTCTGACGCCGCGGCCAGCCCTGCAGGCGATGAACCCGGAC TTCCCTTCCCTGTACCCGGATCCGGAAACGCTGCAAATTTTCGGCGTGGTGACAGCCTTCATTCATAAAA CCCGGAGGGCAGACTGATGTTCGCCCTGGCTGACGTCAACTCCTTCTACGCCAGTTGCGAGAAGGTTTTC AGGCCGGATTTGCGCGGCAAACCTGTCGTCGTTCTCAGTAACAACGATGGCTGCGTTATTGCCCGGAGTG CTGAAGCCAAACTGCTGGGTATAAAGATGGGAACCCCCTGGTTCCAGCTCAAAGAGGCGCAGTTTCCTGA AAAATTGTACGTTTTTTCCAGCAACTACGAGCTCTACGCGAGCCTGAGTAACCGTGTGGTCGCCCTGCTG GAAGAGCTGTCGCCCCGCGTCGAACAATACTCAATTGACGAATGTTTCCTGGATGCCCGGGGAATTGGCC ACTGTATGGATCTGGAGGATTTTGGCAGGCAGCTGCGTGGGCATGTTCTCAGTGGAACCGGACTGACGAT CGGTGTCGGCTTCGGCGCCACAAAAACACTGGCCAAATCGGCGCAGTGGGCGTCAAAGGAATGGCCACAA TTCAGGGGGGTACTGGCGCTGTCGCCCGAAAATCCACGCAGAACGGCAAAATTACTCAGCCTGCAGCCGG TGGAAGAAATCTGGGGCGTGGGGAACCGGATAGCGAAAAAGCTGCACGTTATGGGGATCACCACCGCCCT GCAGCTGTCGCTGACGAACCCCACATTTATCCGGAAAAACTTCAACGTAGTGCTGGAGCGCACGGTACGT GAGCTGAACGGCGAGAGTTGCATTTCACTGGAGGAAGCGCCGCCGCCGAAACAGCAGATTGTCTGCAGTC GTAGCTTCGGGCAGCGGATCACCACCTACGAAGAAATGCGCCAGGCCGTCTGCCAGTATGCCGAGCGCGC GTCGGAAAAGTTGCGCGGTGAGCGACAGTACTGCCGGCATATCAGCACCTTCATCAAGACATCCCCTTTT GCGGTTAATGAGCCGTATTACGGTAACGTGGCCACGGAAAAACTGAACACCCCTACCCGTGACACCCGGG ACATTATCGCGGCAGCGGTCAGGTCTCTGGACAGGATCTGGCTCGATGGCCACCGCTACGCAAAAGCGGG GATAATGCTCAATGATTTCAGTCCGAACGGCGTCGCGCAGCTGAATCTGTTCGATGACGTGCAGCCACGG CCGCACAGCGATGCGCTGATGAAGGTACTCGACGGCATTAATCATTCCGGACTCGGGAAAGTCTGGTTTG CCGGACGGGGTATTGCGCCGGACTGGCAGATGAAACGGGAGATGCTGTCACCGGCATATACCACCCGCTG GAAGGAGCTGCCGGTTGCCCGTTTCTGACCGTCGAAATGACAGACGGGACTTGCCGCCAGAGCTTACTTT ACCGATCATACAGATGACTTGTCTCAGGAGGGAACCATGACAAACATCATTCTGTGTGATGTGACTGCCA GCGTCTGAGAACTTAAAAACGATCCGGTGGCCACCGCCAGTGCCGGCGGCGGCTACCCGGTCGCGATTAT TGACCGCAACCGCCCTGTTTTTTATTGTGTGCCCGCGGCTCTGTATGAACAAATGCTCGATGCGCTGGAC GAAAAAGACCTGGTGCAATTGTTGACATCCTCCCCGCCCTGAAGGGCGAGGATTCCTACAGCGTTCAGAC CGGAGCCTGACTCGCCTCGGTGGGTTCCTGCTTCAGCGGGCGGCCCGACTGTATCATCCCTCCACAGGCA AGCACGGCATGTCCTGCCGCTAAAATGTTACGTGCTCCGTTGATATCGGCGTTCTCGGTATAGCCGCATA CCTGACACACGAATTTACTTTGCGTTTGACGGTTTTCTTTCGCCGTATGACCACAGCAGGCACAACGCTG GCTTGTGTATGCCGGAGGTATCGCCAGTACCTGACCACCACGCCAGAGCTGCTTGTACTCAAGCTGTCTG CGCATTTCGTACCAGCCCTGATCCAGTATCGAACGGTTTAAGCCTGATTTGGCTCTGATGTTTCGTCCGG GCCGCTCTGCCGTACCTTTTGCCGATTTCGACATGTTACTGACCTTCAAGTCCTCAATGACGATCATCGC GTGGTTTTTGCTGATTTCACTGGTGACTTTGTGAAGGTAGTCGCGCCGGATATTGGCAATGTGTGAGTGC AGACGCTGGATTTTTTTCTTCTGTTTCTGCCAACTGGCACTGAATTTAACTTTGCGGCTTAACTGCCGTT GAAGCATAGCCAGCTTACGCTGGCTTGCTTTGAAGCTGTTGACTGGCTGGTATACGGTGCCATCAGAAAG CGTGGCAAGTTTCGTGACTCCGGCGTCCAAACCGACCATTGACGCTGCCTTATGAACCTGTTCAGGCACT TCGTATTCCGTCTGGATGCTAACGTACCATTTGCCGCATGACTGGATGACCGTGACGTTTTTAACTTCGC CGATGACTTCACGGCTATTGCGATAGCGTATCCAGCCCAACTTAGGAAGCGATATACGATTGTTGGTCTG ATCGAGCTTCACGCCTTGCGGGCATCGTTTTGGCCGCGTTTCTTGAAACGAGGGAATGCTGCACGCTTCT GGAAGAAATTCTTGTAGCCGCGCTCCAGATCTTTGAGCGACTGCTGCAACGGCAGTGATGGCGTGTCTTT TAGCCACTGGGTATCAGGGTGTGATTTCCACTCAATGAGCCATGAAGCCATTTTGGTGTAGGAAACATAT TTGTTCCCCGCTTCATGGTTTTCGTTTTGAAGCGCCAGCGCACGGTTAAAGACGAAGCGACAAGCCCCAG CGAAGCGCCGCATATCGCGCTCCTGCTGACCATTCGGTCTTAACTGGAATTTGAAGGCTTGAAGTCGTTT CATGAGGCTATTTTAACCGAAGTTAGTCGGAAAACCGCGCCTTATATCCCCGCCCTGAAGGTCGGGGTTT TAAGGCGCACTGGATAACAGGGGCCTCTTGCCGTCCCCCAAAAACAAACGGTATGTTTATGCGCTGTGAT GATTCCCCCGGATTCTTTTTATGGTCCAGTGGTGTCTACAAAGTCAATTAATACGATAACGTGACGGACT TTCAATATGTTACCCACACGGTTATCCCCCGTTACTGTGGATAATCAATATATTGTGTCTCTGGCAGTTG CTTTTCCTACCATATGTTGTCCCTCCCCGTTCTATTTTGTGATCGCACAGTGTGAAAAACGACATCACAG TGGAGACGCTGCTGACGGGATGATGTTCATCCAGGGTCGTAAGATCGGCCGGTACTGGTTACCCGCCGGA CGAAGGGCCGGCCAACGCGCAGCGTCGGTAGCTGGCTTTAAAAATGCCGGCGGAAACTTAAAGATTAAGC TGCATACTCTGCGAAATTTTGCAAATTTCACTCAACATGCTTCGTTCAGATCCCAATAGAGCTTTCACCA TCGCCTGTAATAGCCGCCCTGCTGCGTGATTACTCCGCTCATCGGGTTGCTGGCGACAAGCCAATACCTG TTCGTGACAGGCATTGATTGAACCGTTATCCCTAACTAATAATGTGCCGACGATGCAGGTGGGACCGTGG TCCCAGGCAGATAAGCTGACAGATGACGCAGGTGGGACCGTGGTCCCAGGCAGATAAGCTGACCGACGAC GCAGGTGGGACCATGGTCCCAGGCAGATAACCTGACCGATGACGCAGGTGGGACCGTGGTCCCAGGGAGA TAACCTGACCGGCGATACAGGTGGGACCGTGGTCCCAGGCAGATTACCTGACCGATGACGCAGGTGGGAC CGTGGTCCCAGACAGATAACCTGACCGACGACGCAGGTGGGACCGTGGTCCCAGACAGATAAGCTGACCG ATGACGCAGGTGAGACCGTGGTCCCAGACAGATAAGCTGACCGATGACGCAGGTGGGACCGTGGTCCCAG GCAGATAACCTGACCGACGACGCAGGTGGGCCCGTGGTCCCAGTCAGATAACCTGACCGATGACGCAGGT GGGACCGTGGTCCCAGACAGATTACCTGACAGATGACGCAGGTGGGACCGTGGTCCCAGACAGATTACCT GACAGATGACGCAGGTGGGACCGTGGTCCCAGACAGATAACCTGACCGACGACGCAGGTGGGACCGTGGT CCCAGGCAGATAACCTGACCGATGACGCAGGTGAGACCGTGGTCCCAGGCAGATAACCTGACCGACGATG CAGGTGGGACCGTGGTCCCAGAGAGAATATTCAGGCCAGTTATGTTTTCTGGCCTGTGAGAAAGGAAATG AAGTAAAGGGAGATAACCGTAGACTAAAGCGTGTCCGCATTAGACTCCTGGTTTCTCAAGCTCCTTAAGA ATGGCTTCTATTTTCTCTATACACTCCGCAGGAATGCGGGACTTATCCAGGTTAAGCACCATTTTATCGC CCTTATACAATGCTGTTGCCCCTGGAGCAAACTGATGACGTGAGCTCAGATTAACTCTTGATGCGGGAGA TTGTTTCAGTACGGATGTTAAAAGACTAATGACCTCTTCAGCTTCAAAGATTAGTCCCGCTTTCTTCTGA TCGTGGAGAGTCTCAGCCTGCTGCTTCAGTAATTCTTCTTTATCTGCAAAAGCCTTCTGAAGGGCTTCAC CTGACCGGGCAGACAGTTCTCCAGGATGTGCAAACAGGGCAACAACGGATTTAGGCAGTTTGGCCGTATT AATACAGCGGGTAATGATCTTACGAGAAATGTTTTCCGCATCGGCAAGCGCAGAAATATTTCCTGCAAAC TCATTCTGCAGCCGGCTTGTATAACGCAGGCCACGTTCATAAGCACTCGTCGGCCGATAATCGTTACCCA GCCGGGACAATGCAGCCATCTGCTCATCGTCCAGTTCACCAACCAGAACGCGATAATCACTTTCCGTCAG GATTGCGGCTTTACGGCGACGGCTGCCGTCTGCAATTTCTATGACATCAGAAACCCGGCGGCCGAAAGCT GGAGTCTGCTGACCGGTCAGTAAAAATGAAGGTATGAGATCATCCAGAGCATCTTCGGTAAGTAGTTCCT GATCACGCTCATTTCCTGACCATACGCGTGAGGCGCTCTCAACAGAGTCTCCCCGGAGCACCTCAAGGGT AAATTTTACTTCCCGTCCACATACCGGAAGAGAGATAGCATTACCGCGGGCCATAGCACCCACGCGCGCA ATTAATGAATCCACCATCGGCGCGGCCGGCGCCGGTGATGAAGTATCTTCAGTCGATTGAGTATGTGTGG TATGCCTTGGAATGACAGGGGCACGCTTCATTATCTAATCTCCCAGCGTGGTTTAATCAGACGATCAAAA ATCTCATTACAAACAGGTTCCCAGATTGAAAGTGCGTTTCGCCATGCGCCGGTCGAAGAACGTTGATCAA TCGCCTGTTCGAAAACGGTTCTCATGCGGATCTGGCCTTTACCAACTTCATCGGTTTCACGTACCACATT TTTAAGAACCATGCTTCCCCATGCATCGCGAATTTGTTCTTCCATCCACGGTGACTGCGAACCATTGTTA TTACTGTATTTGGTAAGGAGAATACGGACATCCGGCTCAAAGCCTTTAAGATCCACATTCCTGAGCAGAT CACGAAGCATATCGAAAAACTGCAGTGCAGAAGTGTAATCGAACAGCTCTGCCGGGGTGGGAACAATCAG CACATCAGCAGCGCATACGACATTGATCGTGCCAATACCGAGGTTCGGTGCGCTGTCGATAACAATCACA TCATAGTCATGAGCGACCGTTTCAATAGCAAGGCGGAGCATCAGATGCGGGTCGGTGGGCAGTTTTCCTT CATCAAATTTGCCCATCAGTTCAGTTTCAATGCGATGCAGTGCCAGGCAGGACGGAATGATATCAAGGCC AGGCCAGCAGGTTGGTTTTATCGCATAACTGGCATCATCCTTTTCACCAAGATAAAAGGGCAGGAGAGTA TCTTCCGCGTGTATATGAAGATCGGGCACCCATCCGTGATACATCGAGGCTGTGCCCTGAGGATCATTAC CCTCGACAAGCAGAACGCGTAATCCTTTCAGGGCCAGGTCCTGAGCCAGGTGAACAGAAACGGAGGTTTT GTAAACACCACCTTTGTGAGCAGCAACACCAATCACCGGCGGAAACGCATCTTCAGCACGGCGCAGTCGT GTACCAAATACATCCCGCATGTGATTGATTTGCTCGATGGTATAACCAACGCGTTGCTCAACTCTTCCAC GGGTTTCCATATCAGGGTGAGGCAGCCGGCCAGCTTTCTCGGCATCCCTGATAGCCTGAGATGACACGCC AACTAAATCAGCTGCTTCACCAATCCTCCAGCGCCGGGTTATTTTCCGGGCTTCCGGACTGTCATCATTA AACTGCGCAATGGCGATTGCTTTCGTCATTTCATGACCAGCACTTATGCACTGGTTGAGTGTATCCATGA GTCCCAT
Region Details
| Region | 3 |
| Region Length | 10.5Kb |
| Completeness(score) | incomplete(20) |
| Specific Keyword | transposase |
| Region Position | 139463-150039 |
| # tRNA | 0 |
| # Total Proteins | 13 |
| # Phage Hit Proteins | 8 |
| # Hypothetical Proteins | 4 |
| Phage + Hypothetical Protein % | 92.3% |
| # Bacterial Proteins | 1 |
| Attachment Site | no |
| # Phage Species | 7 |
| Most Common Phage Name(hit genes count) | PHAGE_Entero_P1_NC_005856(3) PHAGE_Klebsi_phiKO2_NC_005857(3) PHAGE_Salmon_SJ46_NC_031129(3) PHAGE_Entero_N15_NC_001901(2) PHAGE_Yersin_PY54_NC_005069(2) PHAGE_Cronob_ENT39118_NC_019934(2) PHAGE_Salmon_vB_SosS_Oslo_NC_018279(2) PHAGE_Escher_HK639_NC_016158(1) PHAGE_Bacill_BalMu_1_NC_030945(1) PHAGE_Pseudo_phi3_NC_030940(1) PHAGE_Pseudo_YuA_NC_010116(1) PHAGE_Vibrio_VP58.5_NC_027981(1) PHAGE_Pseudo_MP1412_NC_018282(1) PHAGE_Brocho_A9_NC_015253(1) PHAGE_Staphy_Twort_NC_007021(1) PHAGE_Brevib_Sundance_NC_028749(1) PHAGE_Entero_HK140_NC_019710(1) PHAGE_Pectob_ZF40_NC_019522(1) PHAGE_Bacill_SPbeta_NC_001884(1) PHAGE_Bordet_BPP_1_NC_005357(1) PHAGE_Salmon_SEN34_NC_028699(1) PHAGE_Pseudo_M6_NC_007809(1) |
| First Most Common Phage # | 2 |
| First Most Common Phage % | 23.07% |
| GC % | 54.18% |
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| # tRNA: | The number of tRNA genes present in the region. |
| # Total Proteins: | The number of ORFs present in the region. |
| # Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
| # Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
| Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
| # Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
| Attachment Site: | The putative phage attachment site. |
| # Phage Species: | The number of different phages that have similar proteins to those in the region. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
| First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
| GC %: | The percentage of GC nucleotides of the region. |
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Questionable (score 70-90)
Incomplete (score < 70)
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Score: | The score of the region based on the above criteria. |
| # Total Proteins: | The number of ORFs present in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| GC %: | The percentage of GC nucleotides of the region. |
Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
- If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
- If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
- If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
- If the size of the region is greater than 30 Kb, the score will be increased by 10.
- If there are at least 40 proteins in the region, the score will be increased by 10.
- If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
gi|00000000|ref|CP020062.1| Klebsiella pneumoniae strain AR_0117 plasmid unitig_1, complete 152697, gc%: 50.47%
Download details as .txt file: detail.txt file_download
Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File
Hits against Bacterial Database or GenBank File
Region 1, total 6 CDS
| # | CDS Position | BLAST Hit | E-Value | Sequence |
|---|---|---|---|---|
| 1 | complement(11436..11939) | PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; AM364_27430; phage(gi557307573) | 1.43e-110 | Showinfo_outline |
| 2 | complement(11858..12133) | PHAGE_Entero_P1_NC_005856: InsA; AM364_27435; phage(gi46401643) | 6.23e-60 | Showinfo_outline |
| 3 | complement(12324..13160) | PROPHAGE_Escher_CFT073: insertion element IS2 transposase InsD; AM364_27440; phage(gi26249446) | 1.36e-120 | Showinfo_outline |
| 4 | complement(13163..13558) | PROPHAGE_Escher_CFT073: transposase insC; AM364_27445; phage(gi26251004) | 4.17e-56 | Showinfo_outline |
| 5 | 13561..14106 | PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; AM364_27450; phage(gi557307573) | 1.99e-109 | Showinfo_outline |
| 6 | 14116..14664 | PHAGE_Ralsto_RSA1_NC_009382: transposase IRSO15-like; AM364_27455; phage(gi145708108) | 2.15e-05 | Showinfo_outline |
Sequence
>complement(11436..11939)
KlebsiellapneumoniaeMSRQCTHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELYDKVIGHYLNIKHYQ
Sequence
>complement(11858..12133)
KlebsiellapneumoniaeMASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR
Sequence
>complement(12324..13160)
KlebsiellapneumoniaeMVSRTMGVSRAQLSLRINRSADWQDKRCNRRNDEADEEILSAILDIISDMPSYGYRRVWGILRKQRRTEGQPPVNAKRLYRIMSEHNLLLLHDKPERPKREHKGKIAVAESDMRWCSDGFEFGCDNGEKLRVTFALDCCDREAIDWAASTGGYDSSTVQDVMLRSVEKRFGDRLPDTAVQWLTDNGSAYTAYETWRFARELNLEPCTTAVSSPQSNGMAERFVKTMKEDYIAFMPKPDVRTALRNLAVAFTHYNENHPHSALGYHSPREYRRQRTSLT
Sequence
>complement(13163..13558)
KlebsiellapneumoniaeMSNTNANFEMTGILLGQEARKRKTPQEKIAIIQQTMEPGMNVSHVARLHGIQPSLLFKWKKQYQEGSLTAVAAGEEVVPASELTAALKQVRELQRLLGKKTMEVEILKEAVEYGQSRKWIAHAPLLPKDGE
Sequence
>13561..14106
KlebsiellapneumoniaeMQAYLLSGDTATVRCFRGLHHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVNSKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ
Sequence
>14116..14664
KlebsiellapneumoniaeMTQAQLSKEDRIYVKKSIRWLTLKRPGNLTPAEQKALEVVKQAIPALAMAYDFKEAFFCIYDEPDKQSAQNAFEAWKNSLPPYGMEPFKKLVKTVHNHYDDIFAYWDAPFSLTNGYTEGLNGLIKMSNRLGRGYSYEIIRAKTLYSKEARKVGSGIRAGRGKVEYGPHIPTLLKQAEGGELD
Region 2, total 17 CDS
| # | CDS Position | BLAST Hit | E-Value | Sequence |
|---|---|---|---|---|
| 1 | complement(39951..40655) | PROPHAGE_Brucel_1330: transposase, putative; AM364_27570; phage(gi23502708) | 1.98e-53 | Showinfo_outline |
| 2 | complement(40731..41231) | N-acetyltransferase; AM364_27575 | 0.0 | Showinfo_outline |
| 3 | 41250..41429 | hypothetical protein; AM364_27580 | 0.0 | Showinfo_outline |
| 4 | complement(41359..42198) | sulfonamide-resistant dihydropteroate synthase Sul1; AM364_27585 | 0.0 | Showinfo_outline |
| 5 | complement(42192..42539) | PHAGE_Acinet_Acj61_NC_014661: putative quaternary ammonium compound-resistance protein qacE; AM364_27590; phage(gi311992758) | 9.11e-09 | Showinfo_outline |
| 6 | complement(42696..43328) | type B-3 chloramphenicol O-acetyltransferase CatB3; AM364_27595 | 0.0 | Showinfo_outline |
| 7 | complement(43411..43944) | aminoglycoside nucleotidyltransferase ANT(2'')-Ia; AM364_27600 | 0.0 | Showinfo_outline |
| 8 | 44090..45103 | PHAGE_Mycoba_Butters_NC_021061: integrase; AM364_27605; phage(gi479336499) | 2.26e-12 | Showinfo_outline |
| 9 | complement(45062..45241) | transcriptional regulator; AM364_27610 | 0.0 | Showinfo_outline |
| 10 | complement(45706..46275) | PHAGE_Vibrio_PWH3a_P1_NC_020863: dihydrofolate reductase; AM364_27615; phage(gi472342455) | 7.50e-14 | Showinfo_outline |
| 11 | complement(46275..46775) | PHAGE_Bacill_AR9_NC_031039: hypothetical protein; AM364_27620; phage(gi100094) | 2.88e-06 | Showinfo_outline |
| 12 | complement(47041..47880) | IS91 family transposase; AM364_27625 | 0.0 | Showinfo_outline |
| 13 | 47907..48005 | glycosyl transferase; AM364_27630 | 0.0 | Showinfo_outline |
| 14 | 47962..48237 | PHAGE_Entero_P1_NC_005856: InsA; AM364_27635; phage(gi46401643) | 7.08e-63 | Showinfo_outline |
| 15 | 48156..48659 | PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; AM364_27640; phage(gi557307573) | 1.15e-118 | Showinfo_outline |
| 16 | complement(48861..49028) | integrase; AM364_27645 | 0.0 | Showinfo_outline |
| 17 | 49170..49655 | PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; AM364_27650; phage(gi557307612) | 1.88e-101 | Showinfo_outline |
Sequence
>complement(39951..40655)
KlebsiellapneumoniaeMNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
Sequence
>complement(40731..41231)
KlebsiellapneumoniaeMDSEEPPNVRVACSGDIDEVVRLMHDAAAWMSAKGTPAWDVARIDRTFAETFVLRSELLVASCSDGIVGCCTLSAEDPEFWPDALKGEAAYLHKLAVRRTHAGRGVSSALIEACRHAARTQGCAKLRLDGHPNLRGLYERLGFTHVDTFNPGWDPTFIAERLELEI
Sequence
>41250..41429
KlebsiellapneumoniaeMNRRLIVQFDPDEPSMSAPTFAEPDQGPLAGGRKVNARHDLTLGLWRRDCEISRGFPRR
Sequence
>complement(41359..42198)
KlebsiellapneumoniaeMVTVFGILNLTEDSFFDESRRLDPAGAVTAAIEMLRVGSDVVDVGPAASHPDARPVSPADEIRRIAPLLDALSDQMHRVSIDSFQPETQRYALKRGVGYLNDIQGFPDPALYPDIAEADCRLVVMHSAQRDGIATRTGHLRPEDALDEIVRFFEARVSALRRSGVAADRLILDPGMGFFLSPAPETSLHVLSNLQKLKSALGLPLLVSVSRKSFLGATVGLPVKDLGPASLAAELHAIGNGADYVRTHAPGDLRSAITFSETLAKFRSRDARDRGLDHA
Sequence
>complement(42192..42539)
KlebsiellapneumoniaeMKGWLFLVIAIVGEVIATSALKSSEGFTKLAPSAVVIIGYGIAFYFLSLVLKSIPVGVAYAVWSGLGVVIITAIAWLLHGQKLDAWGFVGMGLIIAAFLLARSPSWKSLRRPTPW
Sequence
>complement(42696..43328)
KlebsiellapneumoniaeMTNYFDSPFKGKLLSEQVKNPNIKVGRYSYYSGYYHGHSFDDCARYLFPDRDDVDKLIIGSFCSIGSGASFIMAGNQGHRYDWASSFPFFYMQEEPAFSSALDAFQKAGNTVIGNDVWIGSEAMVMPGIKIGHGAVIGSRSLVTKDVEPYAIVGGNPAKKIKKRFTDEEISLLLEMEWWNWSLEKIKAAMPMLCSSNIVGLHKYWLEFAV
Sequence
>complement(43411..43944)
KlebsiellapneumoniaeMDTTQVTLIHKILAAADERNLPLWIGGGWAIDARLGRVTRKHDDIDLTFPGERRGELEAIVEMLGGRVMEELDYGFLAEIGDELLDCEPAWWADEAYEIAEAPQGSCPEAAEGVIAGRPVRCNSWEAIIWDYFYYADEVPPVDWPTKHIESYRLACTSLGAEKVEVLRAAFRSRYAA
Sequence
>44090..45103
KlebsiellapneumoniaeMKTATAPLPPLRSVKVLDQLRERIRYLHYSLPTEQAYVHWVRAFIRFHGVRHPATLGSSEVEAFLSWLANERKVSVSTHRQALAALLFFYGKVLCTDLPWLQEIGRPRPSRRLPVVLTPDEVVRILGFLEGEHRLFAQLLYGTGMRISEGLQLRVKDLDFDHGTIIVREGKGSKDRALMLPESLAPSLREQLSRARAWWLKDQAEGRSGVALPDALERKYPRAGHSWPWFWVFAQHTHSTDPRSGVVRRHHMYDQTFQRAFKRAVEQAGITKPATPHTLRHSFATALLRSGYDIRTVQDLLGHSDVSTTMIYTHVLKVGGAGVRSPLDALPPLTSER
Sequence
>complement(45062..45241)
KlebsiellapneumoniaeMDPSGNDGLLPAISGRREDFPQPAVRCGTDGLRAGVVNPPGLTCAALPLTSEGRQRIKR
Sequence
>complement(45706..46275)
KlebsiellapneumoniaeMSHPQLELIVAVDSKLGFGKGGKIPWKCKEDMARFTRISKEIRVCVMGKHTYTDMRDMQLEKDGAEERIKEKGILPERESFVISSTLKQEDVIGATVVPDLRAVINLYENTDQRIAVIGGEKLYIQALSSATKLHMTIIPREFDCDRFIPVDPIQNNFHIDSSASETVEATVDETQERIHFATYVRNNQ
Sequence
>complement(46275..46775)
KlebsiellapneumoniaeMPHFGRGVGRRKMKALCEGLDIKTLDDFNAITEEQIVSVDKFSYKTAAKVLAGMAEHAELFNKIQSIIGFKQQVTSGDRFTGEKIVITGFRDAALEKLIEAEGGEVQSSVSSKTTMVIAASTSGSSGKLKKVHDLNNSGKANIKLIDLATFRKQYLEQPASTGLEF
Sequence
>complement(47041..47880)
KlebsiellapneumoniaeMEKRGILERDAENTWLTLEEGEDDTLTQLHGASVTYRIAVGPQQGRKVFTLQTLPGREDKADSSSRVANHAGFSLHAGVMAEAHQRDKLERLCRYISRPAVSEKRLALTANGQVRYELKTPYRNGTTHVIFEPLDFIAKLAALVPKPRVNLTRFHGVFAPNSKHRVQVTPAKRGKKPDKSEGLDTNWRDKSPAERHRAMTWMQRLKRVFNIDIEVCEHCGGHVKVIASIEDPKVIEQILKHLKQKTAKANAAKQRELPPERAPPLTPSLFDPSQSRLFD
Sequence
>47907..48005
KlebsiellapneumoniaeGDAANLLICMMVFLRCSSGFCFYQLSLLFSY
Sequence
>47962..48237
KlebsiellapneumoniaeMASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTIFRHLKNSGRSR
Sequence
>48156..48659
KlebsiellapneumoniaeMPGNRPHYGRWPQHDFPPFKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ
Sequence
>complement(48861..49028)
KlebsiellapneumoniaeMDNITLEKKHVAGGKFGFVTRIFHPERPHESLNNLTPEDHLLMAEKPELSKSAWN
Sequence
>49170..49655
KlebsiellapneumoniaeRARTKGKVERMVKYLKENFFVRYRRFDSFAQVNQLLEQWMADVADRRELRQFRQTPEQRFTQEQEHLQPLPDTDFDTSYFDIRHVSWDGYIEVGGNRYSVPESLCGQPVSIRISLDDELRIYSNEQQMASHRLCSAASGWQTVPEHHAPLWQQVSQVEPEI
Region 3, total 13 CDS
| # | CDS Position | BLAST Hit | E-Value | Sequence |
|---|---|---|---|---|
| 1 | complement(139463..139717) | PHAGE_Escher_HK639_NC_016158: DNA pol III theta; AM364_28190; phage(gi356870660) | 3.30e-22 | Showinfo_outline |
| 2 | complement(139954..140379) | PHAGE_Pseudo_YuA_NC_010116: hypothetical protein; AM364_28195; phage(gi162135127) | 1.98e-14 | Showinfo_outline |
| 3 | complement(140900..141130) | hypothetical protein; AM364_28200 | 0.0 | Showinfo_outline |
| 4 | complement(141364..142848) | PHAGE_Pseudo_phi3_NC_030940: hypothetical protein; AM364_28205; phage(gi100001) | 1.95e-36 | Showinfo_outline |
| 5 | complement(142848..143099) | hypothetical protein; AM364_28210 | 0.0 | Showinfo_outline |
| 6 | 143254..143679 | PHAGE_Cronob_ENT39118_NC_019934: protein umuD; AM364_28215; phage(gi431811072) | 6.78e-32 | Showinfo_outline |
| 7 | 143679..144950 | PHAGE_Cronob_ENT39118_NC_019934: DNA polymerase; AM364_28220; phage(gi431811050) | 0.0 | Showinfo_outline |
| 8 | 145029..145244 | plasmid stabilization protein; AM364_28225 | 0.0 | Showinfo_outline |
| 9 | complement(145267..146465) | PROPHAGE_Escher_Sakai: putative transposase; AM364_28230; phage(gi38704244) | 7.61e-64 | Showinfo_outline |
| 10 | 146679..146913 | hypothetical protein; AM364_28235 | 0.0 | Showinfo_outline |
| 11 | complement(146940..147902) | hypothetical protein; AM364_28240 | 0.0 | Showinfo_outline |
| 12 | complement(147902..148873) | PHAGE_Yersin_PY54_NC_005069: partitioning protein SpyB; AM364_28245; phage(gi33770536) | 9.74e-114 | Showinfo_outline |
| 13 | complement(148873..150039) | PHAGE_Klebsi_phiKO2_NC_005857: plasmid partition protein SopA; AM364_28250; phage(gi46402111) | 0.0 | Showinfo_outline |
Sequence
>complement(139463..139717)
KlebsiellapneumoniaeMSQWNIASFSKEEQDKVAVDKVAADVAWQERMNKPVMPELVEREQPEHLREYFHERFRVHRLNSQQLPRANAPEYNKPGDDQQN
Sequence
>complement(139954..140379)
KlebsiellapneumoniaeMYHARQTMLNVEESDRLSFLPDLFGNDFLAGEMQVYALAEKHITDYCGGFWHFIRIPEGGGYMMPDGDRFHLTNPDNWFDRSVSADAAGVIITALAINRRIWLHHERGDAALTRHLMLRESQLWNFIDSHDECAAIYAALD
Sequence
>complement(140900..141130)
KlebsiellapneumoniaeMNTGLRQVLRYAGVPVDAAEPVRRQFGSRLILIVTVALLPLLIVDVPLWLFVLSQIIWGSGMYIGISVASDKPDRR
Sequence
>complement(141364..142848)
KlebsiellapneumoniaeMYGEEKSDSLIVAAKQANNPKGAESVERRSGAKGNAEQPHMRRTQSRESMSQRLSRVREAAKQRKKERFTALFHLLTVEALEAAFLSLSRKAAAGVDGIRWMDYAGNMKNNITDLHRRLHQGSYRAQPGRRHYIPKADGKQRPLGIASLEDKIVQYALVKILNAVYENDFMGFSYGFRPGRSQHDALDALATGLVRTNVNWVLDADISQFFDRVSHEWLIRFTEHRIGDRRVIRLIRKWLTAGTSEEGQWRATEEGTPQGAVISPLLANIYLHYVFDLWAHQWRRRYATGNVVMVRYADDIVIGFDKRYDARRFRIAMQRRLREFGLTVHPEKTRLMEFGRFAAENRAIRGKGKPETFNFLGFTHISGKDRNGRFMLIRKTRRDRMTATLKAIKDGLRRRWHYSIPEQGKWLRRVVQGYLNYHSVPGNFPTMQKFRTHVTNLWRRALRRRSQKDDTTWTKANKLAAAWLPRVRVLHPWPVERFTARHPRQEPGA
Sequence
>complement(142848..143099)
KlebsiellapneumoniaeMTGVLTGQPLSHEMYIKLPGADVVLLTEGNIIGCDTASATWTRRGLRPWHVNTISTREPGDLPSDHLPVSEMARTGKTRSHSR
Sequence
>143254..143679
KlebsiellapneumoniaeMKFIPAVSEASIVKIPLFTERCPAGFPSPASDYTESELDLNEYCIHRRHSTYFVRAIGNSMTDIGLYSGDLLVVDKAEQPRHGDIVIAEIEGEFTVKRLLLTPRPALQAMNPDFPSLYPDPETLQIFGVVTAFIHKTRRAD
Sequence
>143679..144950
KlebsiellapneumoniaeMFALADVNSFYASCEKVFRPDLRGKPVVVLSNNDGCVIARSAEAKLLGIKMGTPWFQLKEAQFPEKLYVFSSNYELYASLSNRVVALLEELSPRVEQYSIDECFLDARGIGHCMDLEDFGRQLRGHVLSGTGLTIGVGFGATKTLAKSAQWASKEWPQFRGVLALSPENPRRTAKLLSLQPVEEIWGVGNRIAKKLHVMGITTALQLSLTNPTFIRKNFNVVLERTVRELNGESCISLEEAPPPKQQIVCSRSFGQRITTYEEMRQAVCQYAERASEKLRGERQYCRHISTFIKTSPFAVNEPYYGNVATEKLNTPTRDTRDIIAAAVRSLDRIWLDGHRYAKAGIMLNDFSPNGVAQLNLFDDVQPRPHSDALMKVLDGINHSGLGKVWFAGRGIAPDWQMKREMLSPAYTTRWKELPVARF
Sequence
>145029..145244
KlebsiellapneumoniaeMTNIILCDVTASVELKNDPVATASAGGGYPVAIIDRNRPVFYCVPAALYEQMLDALDEKDLVQLLTSSPP
Sequence
>complement(145267..146465)
KlebsiellapneumoniaeMKRLQAFKFQLRPNGQQERDMRRFAGACRFVFNRALALQNENHEAGNKYVSYTKMASWLIEWKSHPDTQWLKDTPSLPLQQSLKDLERGYKNFFQKRAAFPRFKKRGQNDARKASSIRPTIVYRFLSWAGYAIAIAVKSSAKLKTSRSSSHAANGTLASRRNTKCLNRFIRQRQWSVWTPESRNLPRFLMAPYTSQSTASKQASVSWLCFNGSAAKLNSVPVGRNRRKKSSVCTHTLPISGATTFTKSPVKSAKTTRSSLRTRSVTCRNRQKVRQSGPDETSEPNQATVRYWIRAGTKCADSLSTSSSGVVVRYWRYLRHTQASVVPAVVIRRKKTVKRKVNSCVRYAAIPRTPISTEHVTFRQDMPCLPVEGYSRAARSRNPPRRVRLRSGA
Sequence
>146679..146913
KlebsiellapneumoniaeMLPTRLSPVTVDNQYIVSLAVAFPTICCPSPFYFVIAQCEKRHHSGDAADGMMFIQGRKIGRYWLPAGRRAGQRAASVG
Sequence
>complement(146940..147902)
KlebsiellapneumoniaeMRTRFSLRLSPFTSFPFSQARKHNWPEYSLWDHGPTCIVGQVICLGPRSHLRHRSGYLPGTTVPPASSVRLSVWDHGPTCVICQVICLGPRSHLRHLSGNLSGTTVPPASSVRLSDWDHGPTCVVGQVICLGPRSHLRHRSAYLSGTTVSPASSVSLSVWDHGPTCVVGQVICLGPRSHLRHRSGNLPGTTVPPVSPVRLSPWDHGPTCVIGQVICLGPWSHLRRRSAYLPGTTVPPASSVSLSAWDHGPTCIVGTLLVRDNGSINACHEQVLACRQQPDERSNHAAGRLLQAMVKALLGSERSMLSEICKISQSMQLNL
Sequence
>complement(147902..148873)
KlebsiellapneumoniaeMKRAPVIPRHTTHTQSTEDTSSPAPAAPMVDSLIARVGAMARGNAISLPVCGREVKFTLEVLRGDSVESASRVWSGNERDQELLTEDALDDLIPSFLLTGQQTPAFGRRVSDVIEIADGSRRRKAAILTESDYRVLVGELDDEQMAALSRLGNDYRPTSAYERGLRYTSRLQNEFAGNISALADAENISRKIITRCINTAKLPKSVVALFAHPGELSARSGEALQKAFADKEELLKQQAETLHDQKKAGLIFEAEEVISLLTSVLKQSPASRVNLSSRHQFAPGATALYKGDKMVLNLDKSRIPAECIEKIEAILKELEKPGV
Sequence
>complement(148873..150039)
KlebsiellapneumoniaeMGLMDTLNQCISAGHEMTKAIAIAQFNDDSPEARKITRRWRIGEAADLVGVSSQAIRDAEKAGRLPHPDMETRGRVEQRVGYTIEQINHMRDVFGTRLRRAEDAFPPVIGVAAHKGGVYKTSVSVHLAQDLALKGLRVLLVEGNDPQGTASMYHGWVPDLHIHAEDTLLPFYLGEKDDASYAIKPTCWPGLDIIPSCLALHRIETELMGKFDEGKLPTDPHLMLRLAIETVAHDYDVIVIDSAPNLGIGTINVVCAADVLIVPTPAELFDYTSALQFFDMLRDLLRNVDLKGFEPDVRILLTKYSNNNGSQSPWMEEQIRDAWGSMVLKNVVRETDEVGKGQIRMRTVFEQAIDQRSSTGAWRNALSIWEPVCNEIFDRLIKPRWEIR
Click on a region to see details.
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Length: 152697 bps
Phages: 3
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Click on a region in the genome above to show details here.
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Click on a sequence to see details.
Locus 1: AM364_27430 (Region 1)
Locus: AM364_27430ORF Start: 11436
ORF Stop: 11939
Strand: Backward
Protein Sequence: MSRQCTHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELYDKVIGHYLNIKHYQ
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: AM364_27430, IS1 transposase B, phage(gi557307573), PHAGE_Shigel_SfIV_NC_022749
Homolog/Ortholog E-Value: 1.43e-110
Locus 2: AM364_27435 (Region 1)
Locus: AM364_27435ORF Start: 11858
ORF Stop: 12133
Strand: Backward
Protein Sequence: MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: AM364_27435, InsA, phage(gi46401643), PHAGE_Entero_P1_NC_005856
Homolog/Ortholog E-Value: 6.23e-60
Locus 3: AM364_27440 (Region 1)
Locus: AM364_27440ORF Start: 12324
ORF Stop: 13160
Strand: Backward
Protein Sequence: MVSRTMGVSRAQLSLRINRSADWQDKRCNRRNDEADEEILSAILDIISDMPSYGYRRVWGILRKQRRTEGQPPVNAKRLYRIMSEHNLLLLHDKPERPKREHKGKIAVAESDMRWCSDGFEFGCDNGEKLRVTFALDCCDREAIDWAASTGGYDSSTVQDVMLRSVEKRFGDRLPDTAVQWLTDNGSAYTAYETWRFARELNLEPCTTAVSSPQSNGMAERFVKTMKEDYIAFMPKPDVRTALRNLAVAFTHYNENHPHSALGYHSPREYRRQRTSLT
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: AM364_27440, insertion element IS2 transposase InsD, phage(gi26249446), PROPHAGE_Escher_CFT073
Homolog/Ortholog E-Value: 1.36e-120
Locus 4: AM364_27445 (Region 1)
Locus: AM364_27445ORF Start: 13163
ORF Stop: 13558
Strand: Backward
Protein Sequence: MSNTNANFEMTGILLGQEARKRKTPQEKIAIIQQTMEPGMNVSHVARLHGIQPSLLFKWKKQYQEGSLTAVAAGEEVVPASELTAALKQVRELQRLLGKKTMEVEILKEAVEYGQSRKWIAHAPLLPKDGE
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: AM364_27445, transposase insC, phage(gi26251004), PROPHAGE_Escher_CFT073
Homolog/Ortholog E-Value: 4.17e-56
Locus 5: AM364_27450 (Region 1)
Locus: AM364_27450ORF Start: 13561
ORF Stop: 14106
Strand: Forward
Protein Sequence: MQAYLLSGDTATVRCFRGLHHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVNSKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: AM364_27450, IS1 transposase B, phage(gi557307573), PHAGE_Shigel_SfIV_NC_022749
Homolog/Ortholog E-Value: 1.99e-109
Locus 6: AM364_27455 (Region 1)
Locus: AM364_27455ORF Start: 14116
ORF Stop: 14664
Strand: Forward
Protein Sequence: MTQAQLSKEDRIYVKKSIRWLTLKRPGNLTPAEQKALEVVKQAIPALAMAYDFKEAFFCIYDEPDKQSAQNAFEAWKNSLPPYGMEPFKKLVKTVHNHYDDIFAYWDAPFSLTNGYTEGLNGLIKMSNRLGRGYSYEIIRAKTLYSKEARKVGSGIRAGRGKVEYGPHIPTLLKQAEGGELD
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: AM364_27455, transposase IRSO15-like, phage(gi145708108), PHAGE_Ralsto_RSA1_NC_009382
Homolog/Ortholog E-Value: 2.15e-05
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Locus 1: AM364_27570 (Region 2)
Locus: AM364_27570ORF Start: 39951
ORF Stop: 40655
Strand: Backward
Protein Sequence: MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: AM364_27570, transposase, putative, phage(gi23502708), PROPHAGE_Brucel_1330
Homolog/Ortholog E-Value: 1.98e-53
Locus 2: AM364_27575 (Region 2)
Locus: AM364_27575ORF Start: 40731
ORF Stop: 41231
Strand: Backward
Protein Sequence: MDSEEPPNVRVACSGDIDEVVRLMHDAAAWMSAKGTPAWDVARIDRTFAETFVLRSELLVASCSDGIVGCCTLSAEDPEFWPDALKGEAAYLHKLAVRRTHAGRGVSSALIEACRHAARTQGCAKLRLDGHPNLRGLYERLGFTHVDTFNPGWDPTFIAERLELEI
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: AM364_27575, N-acetyltransferase
Homolog/Ortholog E-Value: N/A
Locus 3: AM364_27580 (Region 2)
Locus: AM364_27580ORF Start: 41250
ORF Stop: 41429
Strand: Forward
Protein Sequence: MNRRLIVQFDPDEPSMSAPTFAEPDQGPLAGGRKVNARHDLTLGLWRRDCEISRGFPRR
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: AM364_27580, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 4: AM364_27585 (Region 2)
Locus: AM364_27585ORF Start: 41359
ORF Stop: 42198
Strand: Backward
Protein Sequence: MVTVFGILNLTEDSFFDESRRLDPAGAVTAAIEMLRVGSDVVDVGPAASHPDARPVSPADEIRRIAPLLDALSDQMHRVSIDSFQPETQRYALKRGVGYLNDIQGFPDPALYPDIAEADCRLVVMHSAQRDGIATRTGHLRPEDALDEIVRFFEARVSALRRSGVAADRLILDPGMGFFLSPAPETSLHVLSNLQKLKSALGLPLLVSVSRKSFLGATVGLPVKDLGPASLAAELHAIGNGADYVRTHAPGDLRSAITFSETLAKFRSRDARDRGLDHA
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: AM364_27585, sulfonamide-resistant dihydropteroate synthase Sul1
Homolog/Ortholog E-Value: N/A
Locus 5: AM364_27590 (Region 2)
Locus: AM364_27590ORF Start: 42192
ORF Stop: 42539
Strand: Backward
Protein Sequence: MKGWLFLVIAIVGEVIATSALKSSEGFTKLAPSAVVIIGYGIAFYFLSLVLKSIPVGVAYAVWSGLGVVIITAIAWLLHGQKLDAWGFVGMGLIIAAFLLARSPSWKSLRRPTPW
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: AM364_27590, putative quaternary ammonium compound-resistance protein qacE, phage(gi311992758), PHAGE_Acinet_Acj61_NC_014661
Homolog/Ortholog E-Value: 9.11e-09
Locus 6: AM364_27595 (Region 2)
Locus: AM364_27595ORF Start: 42696
ORF Stop: 43328
Strand: Backward
Protein Sequence: MTNYFDSPFKGKLLSEQVKNPNIKVGRYSYYSGYYHGHSFDDCARYLFPDRDDVDKLIIGSFCSIGSGASFIMAGNQGHRYDWASSFPFFYMQEEPAFSSALDAFQKAGNTVIGNDVWIGSEAMVMPGIKIGHGAVIGSRSLVTKDVEPYAIVGGNPAKKIKKRFTDEEISLLLEMEWWNWSLEKIKAAMPMLCSSNIVGLHKYWLEFAV
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: AM364_27595, type B-3 chloramphenicol O-acetyltransferase CatB3
Homolog/Ortholog E-Value: N/A
Locus 7: AM364_27600 (Region 2)
Locus: AM364_27600ORF Start: 43411
ORF Stop: 43944
Strand: Backward
Protein Sequence: MDTTQVTLIHKILAAADERNLPLWIGGGWAIDARLGRVTRKHDDIDLTFPGERRGELEAIVEMLGGRVMEELDYGFLAEIGDELLDCEPAWWADEAYEIAEAPQGSCPEAAEGVIAGRPVRCNSWEAIIWDYFYYADEVPPVDWPTKHIESYRLACTSLGAEKVEVLRAAFRSRYAA
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: AM364_27600, aminoglycoside nucleotidyltransferase ANT(2'')-Ia
Homolog/Ortholog E-Value: N/A
Locus 8: AM364_27605 (Region 2)
Locus: AM364_27605ORF Start: 44090
ORF Stop: 45103
Strand: Forward
Protein Sequence: MKTATAPLPPLRSVKVLDQLRERIRYLHYSLPTEQAYVHWVRAFIRFHGVRHPATLGSSEVEAFLSWLANERKVSVSTHRQALAALLFFYGKVLCTDLPWLQEIGRPRPSRRLPVVLTPDEVVRILGFLEGEHRLFAQLLYGTGMRISEGLQLRVKDLDFDHGTIIVREGKGSKDRALMLPESLAPSLREQLSRARAWWLKDQAEGRSGVALPDALERKYPRAGHSWPWFWVFAQHTHSTDPRSGVVRRHHMYDQTFQRAFKRAVEQAGITKPATPHTLRHSFATALLRSGYDIRTVQDLLGHSDVSTTMIYTHVLKVGGAGVRSPLDALPPLTSER
Homolog/Ortholog Species: Integrase
Homolog/Ortholog Protein: AM364_27605, integrase, phage(gi479336499), PHAGE_Mycoba_Butters_NC_021061
Homolog/Ortholog E-Value: 2.26e-12
Locus 9: AM364_27610 (Region 2)
Locus: AM364_27610ORF Start: 45062
ORF Stop: 45241
Strand: Backward
Protein Sequence: MDPSGNDGLLPAISGRREDFPQPAVRCGTDGLRAGVVNPPGLTCAALPLTSEGRQRIKR
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: AM364_27610, transcriptional regulator
Homolog/Ortholog E-Value: N/A
Locus 10: AM364_27615 (Region 2)
Locus: AM364_27615ORF Start: 45706
ORF Stop: 46275
Strand: Backward
Protein Sequence: MSHPQLELIVAVDSKLGFGKGGKIPWKCKEDMARFTRISKEIRVCVMGKHTYTDMRDMQLEKDGAEERIKEKGILPERESFVISSTLKQEDVIGATVVPDLRAVINLYENTDQRIAVIGGEKLYIQALSSATKLHMTIIPREFDCDRFIPVDPIQNNFHIDSSASETVEATVDETQERIHFATYVRNNQ
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: AM364_27615, dihydrofolate reductase, phage(gi472342455), PHAGE_Vibrio_PWH3a_P1_NC_020863
Homolog/Ortholog E-Value: 7.50e-14
Locus 11: AM364_27620 (Region 2)
Locus: AM364_27620ORF Start: 46275
ORF Stop: 46775
Strand: Backward
Protein Sequence: MPHFGRGVGRRKMKALCEGLDIKTLDDFNAITEEQIVSVDKFSYKTAAKVLAGMAEHAELFNKIQSIIGFKQQVTSGDRFTGEKIVITGFRDAALEKLIEAEGGEVQSSVSSKTTMVIAASTSGSSGKLKKVHDLNNSGKANIKLIDLATFRKQYLEQPASTGLEF
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: AM364_27620, hypothetical protein, phage(gi100094), PHAGE_Bacill_AR9_NC_031039
Homolog/Ortholog E-Value: 2.88e-06
Locus 12: AM364_27625 (Region 2)
Locus: AM364_27625ORF Start: 47041
ORF Stop: 47880
Strand: Backward
Protein Sequence: MEKRGILERDAENTWLTLEEGEDDTLTQLHGASVTYRIAVGPQQGRKVFTLQTLPGREDKADSSSRVANHAGFSLHAGVMAEAHQRDKLERLCRYISRPAVSEKRLALTANGQVRYELKTPYRNGTTHVIFEPLDFIAKLAALVPKPRVNLTRFHGVFAPNSKHRVQVTPAKRGKKPDKSEGLDTNWRDKSPAERHRAMTWMQRLKRVFNIDIEVCEHCGGHVKVIASIEDPKVIEQILKHLKQKTAKANAAKQRELPPERAPPLTPSLFDPSQSRLFD
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: AM364_27625, IS91 family transposase
Homolog/Ortholog E-Value: N/A
Locus 13: AM364_27630 (Region 2)
Locus: AM364_27630ORF Start: 47907
ORF Stop: 48005
Strand: Forward
Protein Sequence: GDAANLLICMMVFLRCSSGFCFYQLSLLFSY
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: AM364_27630, glycosyl transferase
Homolog/Ortholog E-Value: N/A
Locus 14: AM364_27635 (Region 2)
Locus: AM364_27635ORF Start: 47962
ORF Stop: 48237
Strand: Forward
Protein Sequence: MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTIFRHLKNSGRSR
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: AM364_27635, InsA, phage(gi46401643), PHAGE_Entero_P1_NC_005856
Homolog/Ortholog E-Value: 7.08e-63
Locus 15: AM364_27640 (Region 2)
Locus: AM364_27640ORF Start: 48156
ORF Stop: 48659
Strand: Forward
Protein Sequence: MPGNRPHYGRWPQHDFPPFKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: AM364_27640, IS1 transposase B, phage(gi557307573), PHAGE_Shigel_SfIV_NC_022749
Homolog/Ortholog E-Value: 1.15e-118
Locus 16: AM364_27645 (Region 2)
Locus: AM364_27645ORF Start: 48861
ORF Stop: 49028
Strand: Backward
Protein Sequence: MDNITLEKKHVAGGKFGFVTRIFHPERPHESLNNLTPEDHLLMAEKPELSKSAWN
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: AM364_27645, integrase
Homolog/Ortholog E-Value: N/A
Locus 17: AM364_27650 (Region 2)
Locus: AM364_27650ORF Start: 49170
ORF Stop: 49655
Strand: Forward
Protein Sequence: RARTKGKVERMVKYLKENFFVRYRRFDSFAQVNQLLEQWMADVADRRELRQFRQTPEQRFTQEQEHLQPLPDTDFDTSYFDIRHVSWDGYIEVGGNRYSVPESLCGQPVSIRISLDDELRIYSNEQQMASHRLCSAASGWQTVPEHHAPLWQQVSQVEPEI
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: AM364_27650, IS21 transposase, phage(gi557307612), PHAGE_Entero_fiAA91_ss_NC_022750
Homolog/Ortholog E-Value: 1.88e-101
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Locus 1: AM364_28190 (Region 3)
Locus: AM364_28190ORF Start: 139463
ORF Stop: 139717
Strand: Backward
Protein Sequence: MSQWNIASFSKEEQDKVAVDKVAADVAWQERMNKPVMPELVEREQPEHLREYFHERFRVHRLNSQQLPRANAPEYNKPGDDQQN
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: AM364_28190, DNA pol III theta, phage(gi356870660), PHAGE_Escher_HK639_NC_016158
Homolog/Ortholog E-Value: 3.30e-22
Locus 2: AM364_28195 (Region 3)
Locus: AM364_28195ORF Start: 139954
ORF Stop: 140379
Strand: Backward
Protein Sequence: MYHARQTMLNVEESDRLSFLPDLFGNDFLAGEMQVYALAEKHITDYCGGFWHFIRIPEGGGYMMPDGDRFHLTNPDNWFDRSVSADAAGVIITALAINRRIWLHHERGDAALTRHLMLRESQLWNFIDSHDECAAIYAALD
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: AM364_28195, hypothetical protein, phage(gi162135127), PHAGE_Pseudo_YuA_NC_010116
Homolog/Ortholog E-Value: 1.98e-14
Locus 3: AM364_28200 (Region 3)
Locus: AM364_28200ORF Start: 140900
ORF Stop: 141130
Strand: Backward
Protein Sequence: MNTGLRQVLRYAGVPVDAAEPVRRQFGSRLILIVTVALLPLLIVDVPLWLFVLSQIIWGSGMYIGISVASDKPDRR
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: AM364_28200, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 4: AM364_28205 (Region 3)
Locus: AM364_28205ORF Start: 141364
ORF Stop: 142848
Strand: Backward
Protein Sequence: MYGEEKSDSLIVAAKQANNPKGAESVERRSGAKGNAEQPHMRRTQSRESMSQRLSRVREAAKQRKKERFTALFHLLTVEALEAAFLSLSRKAAAGVDGIRWMDYAGNMKNNITDLHRRLHQGSYRAQPGRRHYIPKADGKQRPLGIASLEDKIVQYALVKILNAVYENDFMGFSYGFRPGRSQHDALDALATGLVRTNVNWVLDADISQFFDRVSHEWLIRFTEHRIGDRRVIRLIRKWLTAGTSEEGQWRATEEGTPQGAVISPLLANIYLHYVFDLWAHQWRRRYATGNVVMVRYADDIVIGFDKRYDARRFRIAMQRRLREFGLTVHPEKTRLMEFGRFAAENRAIRGKGKPETFNFLGFTHISGKDRNGRFMLIRKTRRDRMTATLKAIKDGLRRRWHYSIPEQGKWLRRVVQGYLNYHSVPGNFPTMQKFRTHVTNLWRRALRRRSQKDDTTWTKANKLAAAWLPRVRVLHPWPVERFTARHPRQEPGA
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: AM364_28205, hypothetical protein, phage(gi100001), PHAGE_Pseudo_phi3_NC_030940
Homolog/Ortholog E-Value: 1.95e-36
Locus 5: AM364_28210 (Region 3)
Locus: AM364_28210ORF Start: 142848
ORF Stop: 143099
Strand: Backward
Protein Sequence: MTGVLTGQPLSHEMYIKLPGADVVLLTEGNIIGCDTASATWTRRGLRPWHVNTISTREPGDLPSDHLPVSEMARTGKTRSHSR
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: AM364_28210, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 6: AM364_28215 (Region 3)
Locus: AM364_28215ORF Start: 143254
ORF Stop: 143679
Strand: Forward
Protein Sequence: MKFIPAVSEASIVKIPLFTERCPAGFPSPASDYTESELDLNEYCIHRRHSTYFVRAIGNSMTDIGLYSGDLLVVDKAEQPRHGDIVIAEIEGEFTVKRLLLTPRPALQAMNPDFPSLYPDPETLQIFGVVTAFIHKTRRAD
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: AM364_28215, protein umuD, phage(gi431811072), PHAGE_Cronob_ENT39118_NC_019934
Homolog/Ortholog E-Value: 6.78e-32
Locus 7: AM364_28220 (Region 3)
Locus: AM364_28220ORF Start: 143679
ORF Stop: 144950
Strand: Forward
Protein Sequence: MFALADVNSFYASCEKVFRPDLRGKPVVVLSNNDGCVIARSAEAKLLGIKMGTPWFQLKEAQFPEKLYVFSSNYELYASLSNRVVALLEELSPRVEQYSIDECFLDARGIGHCMDLEDFGRQLRGHVLSGTGLTIGVGFGATKTLAKSAQWASKEWPQFRGVLALSPENPRRTAKLLSLQPVEEIWGVGNRIAKKLHVMGITTALQLSLTNPTFIRKNFNVVLERTVRELNGESCISLEEAPPPKQQIVCSRSFGQRITTYEEMRQAVCQYAERASEKLRGERQYCRHISTFIKTSPFAVNEPYYGNVATEKLNTPTRDTRDIIAAAVRSLDRIWLDGHRYAKAGIMLNDFSPNGVAQLNLFDDVQPRPHSDALMKVLDGINHSGLGKVWFAGRGIAPDWQMKREMLSPAYTTRWKELPVARF
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: AM364_28220, DNA polymerase, phage(gi431811050), PHAGE_Cronob_ENT39118_NC_019934
Homolog/Ortholog E-Value: 0.0
Locus 8: AM364_28225 (Region 3)
Locus: AM364_28225ORF Start: 145029
ORF Stop: 145244
Strand: Forward
Protein Sequence: MTNIILCDVTASVELKNDPVATASAGGGYPVAIIDRNRPVFYCVPAALYEQMLDALDEKDLVQLLTSSPP
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: AM364_28225, plasmid stabilization protein
Homolog/Ortholog E-Value: N/A
Locus 9: AM364_28230 (Region 3)
Locus: AM364_28230ORF Start: 145267
ORF Stop: 146465
Strand: Backward
Protein Sequence: MKRLQAFKFQLRPNGQQERDMRRFAGACRFVFNRALALQNENHEAGNKYVSYTKMASWLIEWKSHPDTQWLKDTPSLPLQQSLKDLERGYKNFFQKRAAFPRFKKRGQNDARKASSIRPTIVYRFLSWAGYAIAIAVKSSAKLKTSRSSSHAANGTLASRRNTKCLNRFIRQRQWSVWTPESRNLPRFLMAPYTSQSTASKQASVSWLCFNGSAAKLNSVPVGRNRRKKSSVCTHTLPISGATTFTKSPVKSAKTTRSSLRTRSVTCRNRQKVRQSGPDETSEPNQATVRYWIRAGTKCADSLSTSSSGVVVRYWRYLRHTQASVVPAVVIRRKKTVKRKVNSCVRYAAIPRTPISTEHVTFRQDMPCLPVEGYSRAARSRNPPRRVRLRSGA
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: AM364_28230, putative transposase, phage(gi38704244), PROPHAGE_Escher_Sakai
Homolog/Ortholog E-Value: 7.61e-64
Locus 10: AM364_28235 (Region 3)
Locus: AM364_28235ORF Start: 146679
ORF Stop: 146913
Strand: Forward
Protein Sequence: MLPTRLSPVTVDNQYIVSLAVAFPTICCPSPFYFVIAQCEKRHHSGDAADGMMFIQGRKIGRYWLPAGRRAGQRAASVG
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: AM364_28235, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 11: AM364_28240 (Region 3)
Locus: AM364_28240ORF Start: 146940
ORF Stop: 147902
Strand: Backward
Protein Sequence: MRTRFSLRLSPFTSFPFSQARKHNWPEYSLWDHGPTCIVGQVICLGPRSHLRHRSGYLPGTTVPPASSVRLSVWDHGPTCVICQVICLGPRSHLRHLSGNLSGTTVPPASSVRLSDWDHGPTCVVGQVICLGPRSHLRHRSAYLSGTTVSPASSVSLSVWDHGPTCVVGQVICLGPRSHLRHRSGNLPGTTVPPVSPVRLSPWDHGPTCVIGQVICLGPWSHLRRRSAYLPGTTVPPASSVSLSAWDHGPTCIVGTLLVRDNGSINACHEQVLACRQQPDERSNHAAGRLLQAMVKALLGSERSMLSEICKISQSMQLNL
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: AM364_28240, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 12: AM364_28245 (Region 3)
Locus: AM364_28245ORF Start: 147902
ORF Stop: 148873
Strand: Backward
Protein Sequence: MKRAPVIPRHTTHTQSTEDTSSPAPAAPMVDSLIARVGAMARGNAISLPVCGREVKFTLEVLRGDSVESASRVWSGNERDQELLTEDALDDLIPSFLLTGQQTPAFGRRVSDVIEIADGSRRRKAAILTESDYRVLVGELDDEQMAALSRLGNDYRPTSAYERGLRYTSRLQNEFAGNISALADAENISRKIITRCINTAKLPKSVVALFAHPGELSARSGEALQKAFADKEELLKQQAETLHDQKKAGLIFEAEEVISLLTSVLKQSPASRVNLSSRHQFAPGATALYKGDKMVLNLDKSRIPAECIEKIEAILKELEKPGV
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: AM364_28245, partitioning protein SpyB, phage(gi33770536), PHAGE_Yersin_PY54_NC_005069
Homolog/Ortholog E-Value: 9.74e-114
Locus 13: AM364_28250 (Region 3)
Locus: AM364_28250ORF Start: 148873
ORF Stop: 150039
Strand: Backward
Protein Sequence: MGLMDTLNQCISAGHEMTKAIAIAQFNDDSPEARKITRRWRIGEAADLVGVSSQAIRDAEKAGRLPHPDMETRGRVEQRVGYTIEQINHMRDVFGTRLRRAEDAFPPVIGVAAHKGGVYKTSVSVHLAQDLALKGLRVLLVEGNDPQGTASMYHGWVPDLHIHAEDTLLPFYLGEKDDASYAIKPTCWPGLDIIPSCLALHRIETELMGKFDEGKLPTDPHLMLRLAIETVAHDYDVIVIDSAPNLGIGTINVVCAADVLIVPTPAELFDYTSALQFFDMLRDLLRNVDLKGFEPDVRILLTKYSNNNGSQSPWMEEQIRDAWGSMVLKNVVRETDEVGKGQIRMRTVFEQAIDQRSSTGAWRNALSIWEPVCNEIFDRLIKPRWEIR
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: AM364_28250, plasmid partition protein SopA, phage(gi46402111), PHAGE_Klebsi_phiKO2_NC_005857
Homolog/Ortholog E-Value: 0.0
Lysis
Terminase
Portal Protein
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Other
Transposase
Fiber Protein
Plate Protein
tRNA
Plate Protein
tRNA
Download data as .txt file: png_input file_download