Submission Results
Sequence Name: Not Available
GenBank Accession Number: 1163063662
GenInfo (GI) Number: 0000000000
Download Results: 1163063662.PHASTER.zip
gi|00000000|ref|CP020075.1| Klebsiella pneumoniae strain AR_0115 plasmid tig00000005, complete 22062, gc%: 57.29%
Download summary as .txt file: summary.txt file_download
Total: 1 prophage regions have been identified, of which 0 regions are intact, 1 regions are incomplete, and 0 regions are questionable.
Region | Region Length | Completeness | Score | # Total Proteins | Region Position | Most Common Phage | GC % | Details |
---|---|---|---|---|---|---|---|---|
1 | 20.7Kb | incomplete | 40 | 11 | 52-20782 info_outline | PHAGE_Salmon_SJ46_NC_031129(3) | 57.62% | Show info_outline |
>1 52-20782 TTACATTTCAAAAACTCTGCTTACCAGGCGCATTTCGCCCAGGGGATCACCATAATAAAATGCTGAGGCC TGGCCTTTGCGTAGTGCACGCATCACCTCAATACCTTTGATGGTGGCGTAAGCCGTCTTCATGGATTTAA ATCCCAGCGTGGCGCCGATTATCCGTTTCAGTTTGCCATGATCGCATTCAATCACGTTGTTCCGGTACTT AATCTGTCGGTGTTCAACGTCAGACGGGCACCGGCCTTCGCGTTTGAGCAGAGCAAGCGCGCGACCATAG GCGGGCGCTTTATCCGTGTTGATGAAGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTT TGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTAAATTAAAAATGAAGTTTTAAATCAAT CTAAAGTATATATGAGTAAACTTGGTCTGACAGTTACCAATGCTTAATCAGTGAGGCACCTATCTCAGCG ATCTGTCTATTTCGTTCATCCATAGTTGCCTGACTCCCCGTCGTGTAGATAACTACGATACGGGAGGGCT TACCATCTGGCCCCAGTGCTGCAATGATACCGCGAGACCCACGCTCACCGGCTCCAGATTTATCAGCAAT AAACCAGCCAGCCGGAAGGGCCGAGCGCAGAAGTGGTCCTGCAACTTTATCCGCCTCCATCCAGTCTATT AATTGTTGCCGGGAAGCTAGAGTAAGTAGTTCGCCAGTTAATAGTTTGCGCAACGTTGTTGCCATTGCTG CAGGCATCGTGGTGTCACGCTCGTCGTTTGGTATGGCTTCATTCAGCTCCGGTTCCCAACGATCAAGGCG AGTTACATGATCCCCCATGTTGTGCAAAAAAGCGGTTAGCTCCTTCGGTCCTCCGATCGTTGTCAGAAGT AAGTTGGCCGCAGTGTTATCACTCATGGTTATGGCAGCACTGCATAATTCTCTTACTGTCATGCCATCCG TAAGATGCTTTTCTGTGACTGGTGAGTACTCAACCAAGTCATTCTGAGAATAGTGTATGCGGCGACCGAG TTGCTCTTGCCCGGCGTCAACACGGGATAATACCGCGCCACATAGCAGAACTTTAAAAGTGCTCATCATT GGAAAACGTTCTTCGGGGCGAAAACTCTCAAGGATCTTACCGCTGTTGAGATCCAGTTCGATGTAACCCA CTCGTGCACCCAACTGATCTTCAGCATCTTTTACTTTCACCAGCGTTTCTGGGTGAGCAAAAACAGGAAG GCAAAATGCCGCAAAAAAGGGAATAAGGGCGACACGGAAATGTTGAATACTCATACTCTTCCTTTTTCAA TATTATTGAAGCATTTATCAGGGTTATTGTCTCATGAGCGGATACATATTTGAATGTATTTAGAAAAATA AACAAATAGGGGTTCCGCGCACATTTCCCCGAAAAGTGCCACCTGACGTCTAAGAAACCATTATTATCAT GACATTAACCTATAAAAATAGGCGTATCACGAGGCCCTTTCGTCTTCAAGAATTTTATAAACCGTGGAGC GGGCAATACTGAGCTGATGAGCAATTTCCGTTGCACCAGTGCCCTTCTGATGAAGCGTCAGCACGACGTT CCTGTCCACGGTACGCCTGCGGCCAAATTTGATTCCTTTCAGCTTTGCTTCCTGTCGGCCCTCATTCGTG CGCTCTAGGATCCTCCGGCGTTCAGCCTGTGCCACAGCCGACAGGATGGTGACCACCATTTGCCCCATAT CACCGTCGGTACTGATCCCGTCGTCAATAAACCGAACCGCTACACCCTGAGCATCAAACTCTTTTATCAG TTGGATCATGTCGGCGGTGTCGCGGCCAAGACGGTCGAGCTTCTTCACCAGAATGACATCACCTTCCTCC ACCTTCATCCTCAGCAAATCCAGCCCTTCCCGATCTGTTGAACTGCCGGATGCCTTGTCGGTAAAGATGC GGTTAGCTTTTACCCCTGCATCTTTGAGCGCTCTGATCTGAATATCGAGGGACTGCTGGCTGGTTGAGAC CCGCGCATAACCAAAAATTCGCATAAAAATGTACCTTAAATCGAATATCAGACACGATGTGTCTATTATG CCAAAATGACGATTTAATGGACACTCAAACGAAGCCGTTTTACTATGTCTGATAATTTATAACATTTCGT ACGGTTGGAAAAATGTTACTAAATGCCCGTCAGGCAGGGAGGCCGATATGCCCGTTGACTTTCTGACCAC TGAGCAGACTGAAAGCTATGGCAGATTCACCGGTGAACCGGATGAGCTTCAGCTGGCACGATATTTTCAC CTTGATGAAGCAGACAAGGAATTTATCGGAAAAAGCAGAGGTGATCACAACCGTCTGGGCATTGCCCTGC AAATTGGATGTGTCCGTTTTCTGGGCACCTTCCTCACCGATATGAATCATATTCCTTCCGGCGTCCGGCA TTTTACCGCCAGACAGCTCGGGATTCGTGATATCACCGTTCTTGCAGAATACGGTCAGAGGGAAAATACC CGCCGTGAGCATGCAGCGCTGATACGTCAGCACTATCAGTATCGTGAATTTGCCTGGCCCTGGACATTTC GCCTTACCCGTCTTTTATATACCCGGAGCTGGATAAGCAACGAACGTCCTGGCCTGCTTTTCGATCTGGC GACAGGGTGGCTTATGCAACATCGTATTATTCTCCCCGGAGCCACTACGCTGACCCGGTTGATTTCAGAG GTAAGGGAAAAGGCGACGTTGCGCCTGTGGAACAAACTGGCACTGATACCGTCAGCCGAACAGCGTTCAC AGCTGGAGATGCTGCTGGGGCCAACTGATTGCAGCCGCCTGTCTTTACTGGAATCACTGAAAAAGGGCCC TGTGACCATCAGTGGTCCGGCGTTTAATGAAGCAATTGAACGCTGGAAAACTCTGAACGATTTTGGCCTG CATGCTGAAAACCTGAGTACACTCCCGGCTGTGCGCCTGAAAAATCTCGCACGTTATGCTGGTATGACTT CGGTGTTCAATATTGCCAGGATGTCACCGCAGAAAAGGATGGCGGTTCTGGTTGCCTTTGTCCTTGCATG GGAAACGCTGGCGCTGGATGATGCATTGGACGTTCTGGGGTTCTAAGCGGGAATCCCAGAAAATTCCGTC ATTCCGTATGATGAAAATTCAGTCGACTCCTCGCTTGACGTGACGAGCGCCAAAAGCCTGCCGCATCTGC CTGGCGCGCTCGAGCTCATCGCCATGCAAATACATCGACGTCGTGGCGATCGACGCATGGCGTAGGTTGT CGCGCACCGCGGTGAGCTGAGCTCCCCGGGCCAACGCATGGCTGGCATGACTGTGACGCATCCAATGAGG CGTGGCACGGCGCAGCTTTTCGGCGGCGACCGGATGATCGGCCTCAATGGCCTCAGCGGCTTGCGTAAAG AATCTTCGCAACACGCACCAAAGGTGAGGGCCGGTGATGCCGGCATTACCGTCTTCCCCAAGACTGCCCA CCAGGGGCGTTTTCGGATTCCACCGTTCCCGGCTGACTGGCAGTTGACGCTGTGCCAAGTATTGGTCCAG CGCCGTATACGCGAGCGGCGGCAAGGCCACCTTACCTGGTTTGCCACCTTTGCCAACCAAATGCAGCCAG TGGTCACCGTGCTCGTCGAGGCGGACATTACCCAGGACGGCGCCGACCAGTTCGCTAGCGCGCAGGCCCG TGGCATAGCCGAAGTCGAGCATGAAGCGCAGGCGTTGTGCTGCCGGCTCGGACCAGCCGTAGGACCATTC CAGGCCGTCTGCAATGGCGCGCAGCAGTAGCCATTCTCCCTCGGTAAAGCCTCGCGCCGTATCCAGTGCG GGCCGCAAGGCGTGACCGCGTACCTTGACGCCGGCGAAAGGGTTGGCCAGCACATAGCGCTGCTCGATGA GCCACCGGAACAGCGCCGAGAGCACCGTCAGCGCATACGCTGCCGAGCGTGCGGACAAGCCGCCCGAGAA GGGGCGCCATTCCACCGAATCGCGTGGTCGAGGTGGCCCCACCCAACGCTCGCGCGGGGTCGGGTGCCGG ACAAAGGCCCGGTACGCGATTGCATCGTCCGTGGTCAGGGATGATAGCGCCCGTCCGCGTTCGACGATGG CCCACAGGATTAGCCGCGCAGCCTCCTTGCGATAGGCGCGCTGTGTGGCGACAGTCTCGTGCAGCGCCAG CCAGGCCTGCACGGCCTCGTAGTCGTTGGTCGCATTCAGCGTGCAAGCGTTGCGCGGGGCCCGGAAATTG CCCTGCGAGCCGTCGACTTCGTTCGGCAGACGCAACTGCTCCCACGGCACGATGCCGCTGGGCTGAATAA TCGGGATCAGGGCCCGGGCGCGCTCGGTGAGCTGCGGATGTGCGGCAAAGAAAGCCTCGACCTGCCGGGC GCCTGTCATGCCGAGTCCCTCGATGGCTTTCCACCAGCCACGCCGGCGGGGAATGCGCACGGTCAGCGCC GAGAGGGTGTGGATACCGTACGCCTGCAGTGCCCTGACGGTCCTCGGAGACAGCCACTGGTCGATGCTGT CGCTGATCTGGGGCTTCGGCGCCGGCAGCGTGGGCAAGAGCCGGATCGCGCGTTCGACGGCACCCGCGCG CCCCTGTCGCTCTTCGGGGGCGTGCTGGAACACGTCGGCCAGATCCGGCCGGTGGCGGCTGTTGGCGAAA ACGATGAGCTGGCGGCGGATATGCCCCAGCATCCCTCGCGCTGATTGACCGGCGGCCTTGCGTGCCGCCA GGTAGTGTTCAACGGCCGCGCGAGAGCTGAGTCCCGCGTACCAGCCGCGCAAGGCAGCCAGCGAATCCGC ATCGGGAAAGCCGACTGGGGTAGAACTCGAAGCCGTAGTCTGGCCCGTTTTCATATGGACAGGTTGCGAT TCGAAAAGCGAGTAACGCGATAATAACGATTATTTCAGTAGAATCGAAAATGCCCCATGTTTCTACGAAA CCTCAAGATAGCAAGAACGGGCCATGAGCAAGAAGAACAAGCTACTCAGCGTCCTATCCGACGCCGAACA GGAGGCCTTGTATGGCCTGCCGGAGTTCGATGATGCGCAGCAGCTGGAATATCTGGCTGTGACAGAAACC GAGTTGGCGCTTGCCAACAGCCGGCCCAGTCTTCATGCCAAGGTCTATTGCCTCTTGCAGATCGGCTACT TCAAGGCCAAGCATGCCTTCTTCAGTTTCGACTGGGACGAAGTCGAGGACGATTGCGCTTTCGTGCTGAG CCGCTATTTCCACGGCGAGGTGTTCGAACCCAAGGCGATCACCAAGCATGAACGCTACACCCAGCGCGAG CAGATCGCCAAACTATTCGGCTACTGGCCGTGGTCGGCCGCCTTCCTGCCGCAGCTCGAGCAGCAGGCCG CACGGACCGTGCGGCGTGACGTAACGCCGGGGTTCGTCGCCGCCGAGCTGATCGTCTGGCTCAATGAGCA CAAGATTATCCGGCCCGGCTATACGACCTTGCAAGAGTTGGTCAGCGAAACGCTATCCGCCGAGCGCCGG CGCCTGGGCAATCTGCTGGAGCAAGCGTTGGACGAATCTGCCAAGGCCGCGCTGAGCCAGCTTCTGGTCC GTGATGACACCCTGTCGCAACTGGCGGCGCTCAAGCAGGACGCCAAGAATTTCGGCTGGCGCCAGATGGT CCGCGAGCGCGAAAAGCGCGCCACGCTGGAGCCGCTGCACGCAATCGCCAAGACACTGCTGCCTAAACTC GACGTCTCGCAGCAGAACCTGCTGTACTACGCGAGCCTGGCAAACTTCTACACCGTCCACGACCTGCGCA ATCTGAAGGCCGATCAGACCCAACTCTACCTGCTGTGCTATGCCTGGGTACGCTACCGGCAGCTCTCCGA CAACCTGGTCGATGCGATGGCGTACCACATGAAGCAGTTGGAGGACGAAAGCAGCGCTGGTGCCAAACAA TCCTTTGCCGACGAGCAGGTGCGCCGTCAGCAGGAAACGCCGCGGGTAGGCCGCCTGCTGTCACTCTACG TTGATGATAGCGTGGCCGATCCCACGCCCTTCGGCGAGGTGCGGCAGCGCGCCTACAAGATCATGCCTCG CGATACGCTGCAAACCACGGCGCAGCGTATGAGCGTGAAGCCGGCGAGCAAGCTGGCCTTGCAGTGGCAG GCGGTGGACGGGCTGGCCGACCGCATGCGCCGCCATCTTCGTCCACTGTACGTTGCGCTCGACCTCTCCG GCTCCAATCCAGACAGTCCATGGCTTGCCGCGCTGGCCTGGGCCAAAGGTGTTTTTGCCAAGCAGCAGCG GCTGTCGCAACGGCCACTCGACGAGTGGCCCGCGGCGACACTTCCGAAACGCTTGCGGCCGTACCTGCTG ACCTTCGACGCCGACGGTAAACCAACCGGCCTGCACGCTGACCGCTACGAGTTCTGGCTGTACCGCCAGA TCAGGAAGCGTCTCCAATCGGGTGAACTCTACCTCGACGACAGCCTGCAACACCGGCACTTCTCAGATGA ACTGGTTGAGATGGACAGGAAGATCGATGTGCTCGCAAAAATGGAGATCCCCTTCCTGCAGCAACCCGTC CATGCCCAACTCGATGCGCTGACTGCCGAACTGCGCACGCAGTGGCTGGCGTTCAACCGCGAGCTGAAAC AGGGCAAGCTGACGCACCTCGAATACAACAAGGACACGCAGAAACTGACCTGGCGCAAGCCCAAGAGCGA GAATGAGAAAGCGCGCGAAAAGGCATTCTACGAGAAGCTTCCGTTCTGCGACGTGGCCGACGTGTTTCGC TTCGTCAACGACGAGTGCAAGTTTCTGTCGGCGTTCACGCCCATGCAGCCGCGCTACGCGAAGAAGGTCG CCGACGCTGACAGCCTGATGGCGGTCATCATCGCGCAAGCGATGAACCACGGCAACCACGTCATGGCGCG CACCAGCGACATCCCGTACCACGTGCTGGATAGCGGCTACCAGCAGTACCTGCGCCAGGCAACGCTGCAC GCGGCCAACGACTGCATCAGCAACGCCATCGCCACGCTACCGATCTTCCCATACTACTCGTTCGACCTCG AAACGCTGTACGGTGCCGTCGACGGGCAGAAATTCAGCGTCGAACGGCCGACCGTGAAGGCGCGCTATTC GCGCAAGTACTTCGGGCGCGGCAAGGGCGTGGTCGCCTACACGCTGCTGTGCAACCACATCCCGCTCAAC GGCTACCTGATCGGCGCGCACGACTACGAGGCCCACCACGTGTTCGACATCTGGTATCGCAACACGTCGG ACATCATGCCGACCGCGATCACCGGCGACATGCACAGCGTCAACAAGGCCAACTTCGCCATCCTGCATTG GTTTGGCCGGCGGTTCGAGCCGCGCTTCACCGACCTCAACGCGCAATTGAAAGAACTCTACTGCGCTGAC GATCCAGCACAGTATCAGGCGTGCCTGATTCGGCCAGTCGGGAAAATCGACTGCGATCTCATCCATCGCG AGAAGCCGAACATCGACCGGATCGTCGCCACACTCGGGCTGAAGGAAATGACGCAGGGCACGCTGATCCG CAAGCTGTGCACCTACACCACGACGAACCCGACGCGGCGCGCGATCTTCGAGTTCGACAAGCTCATCCGC AGCATCTACACGCTTCGCTACCTGCGCGATCCGCAACTGGAACGCAACGTGCACCGCTCGCAAAATCGCC TCGAGTCCTACCATCAGCTACGCTCGGCCATTGCCCAGGTCGGCGGTAAGAAGGAACTGACCGGTCGCAC CGACATTGAAATCGAGATCAGCAACCAGTGCGCACGGCTGATCGCCAACACGATCATTTTCTACAACTCG GCAATCTTGTCGCGGCTGGTGACCAAGTACGAGGCGGCCGGCAACAGCAAGGCGCTGGCACTCATCACAA AAATTTCGCCTGCGGCATGGCGGCACATCCTGCTCAACGGGCACTACACCTTTCAAAGCAGCGGCAAGAC GATCGATCTCGATGCGATCGTCGCAGGCCTGGAACTGGAGTGACGGAATTTTCAGCGGTTCCGTGTTAGC AGCAGTGTAAAACTGACCCACCCCAGCGAAGTAAAACTGATCCACCTGGGCTAGTTTGGCGGCCTTTTCG AGGCCGTCGATGTTGACCCAGGAGCAAACCGTGGAAATCAGAGTTCTTGCCCGACAGGGCCACTCCATCC GGCACATCGCCCGCACGTTGGGGGTCTCGCGCAATACCGTGCGCCGCTACCTCCGCGATCCGTCGGTAGC GCGATACCAGCCCCGTGAACCACGCCCCACCAAACTGGGGCCATTTGAATCTTATCTGCGGCAACGGGTC GAGCAGGCCCACCCCATCTGGCTGCCTGCCACCGTCCTGAATCGGGAAATCCGCGCTCAAGGGTATGGCG GCGGTCTCTCGTTATTGCGCGCCTTCCTCGCCACGCTCAAGCCCGCCCGCCGCGAAGCAGGTCCGGCCGT CCGTTTCGAGACCGAGCCCGGACGGCAGTTGCAGGCTGATTTCGTGGTCTTGCGCCGGGCCAGATCCCCC ATGTCGGCCTTCGTCGCCACGCTGGGATACAGCCGCATGACGTTTGTCACCTTCGTACCGGACGAATCCT TCGAGTCCGTGCGGGACTCCCTGTTGCTGGCTTTTGACTATCTGGGCGGTGTGCCCCGCGAGGTGTTGTT CGACAACATGAAGACCGTGGTGCTGGAACGCGATGCCTACGGTGACGGCAAGCACCGTTTTCACCCCGGC TTGCTTCAACTGGCCGATGACCTGGGGTTCCGGATCCGGCTGTGTCGCCCGTATCGGGCCCAGACCAAAG GCAAGGTCGAGCGCTTCAATCGCTACTTCCGCGAGAGCTTCTACAACCCGTTGCTGACCCGGATGAAGGG CACGGGGCTGCTGCTCGATTGTGCTGCTGCCAACCGACGCGTCCGTGACTGGTTGGCAGACGAGGCGAAT GTGCGGGTCCACGCCACCCTGAACGAGCGCCCCATCGACCGTTGGCGGCAGGAGCGGGAACACCTGCAAC CCTTGCCATCCCGTGTGCGGCGCGACGAGGCCCCCCTGCTGGATAACAGTCTCCGCCCGGTACCACTGGA ATCTCTCCAGCACCCACTGTCTGTCTATGACGCAATTGGGGAGGCCTGCCGATGAACCTCCAGCATGAGC GGATCGACGCCCTGTGCCAGCAACTCAAACTCGAACGGGTGGCAACGCATTACCCCGTCCTGGCGCAGCA GGCGGTGCGCGAGGACTTCAGCTTCACCGACTTCCTGGAACACCTGTTGCGGCATGAAGCGGGGTGTCGC CAGCAGCGCAGCCGCGAACTGCTGACGCGGATGGCTTGCTTCCCGGGCATCAAGACCCTGGAGGACTATG ACTTCAGCTTCAACCCCGGCGTGCCCAAGGCACTGGTGCAGGAGCTGGGCAGTCTGGCGTTTGTCGAACG GGCCGAGAACGTGGTGCTGATCGGACCCTCTGGCATCGGCAAGACCCACCTCGCCATCGCCTTGGGTTAC AAGGCCGCGCAAGCCGGGGTCAAGACACGCTTCATCACGGCAGCCGACCTGATGCTGCAACTGAGCACGG CGCAGCGACAAGGGCGGCTGAAGGAATACTTCAACCGCGCCATCCTCGGTCCACGGCTGCTGGTGATCGA TGAGATCGGCTACCTGCCTTTCGGACGCGAGGAAGCGAACCTGTTCTTTCAGGTGGTGGCGAAGCGCTAT GAGAAAGGGGCGATGATCCTGACCTCGAACCTGCCGTTCAGCCAGTGGGCCGACGCGTTTGCCGGCGATA CCACCCTGACAGCCGCGATGCTGGATCGGCTGCTGCACCATGCCCATATCCTGACCCTGAGCGGCGAAAG CTACCGCTTGAAGGACAAGAGGAAGGCGGGAGTGGTCAGGAAAAATTCCAAACCCGAATGATCCAGGTGG GTCAGTATTACTTTGGTGATTCAGGGGTAAAGTGGGTCAGTTTTCAGTTGGTGTTGACACCGGCGTACCC TCGGTGCTATCTTCGCGCCCCAATAGTCGGGGCTTGGCCAGGACTTCCTGAGGCCGTCCGTAACGTGGAT GCCGAGGTCAGGCGAGGTGGCCGACCCATGAACGCCGACCTGATTCGTTTTTCAATAGCGCTGGACGTTG TGGTGCCAGGGACTTACCAACCCGATGTGTGCCCATCCGGGGCAGTTACAGCCGTTACAGCCTCTGGAGA GGGAGCGGCTTGCCGCTCGGTGATAATCCCAGCTGTAGCGGCCTGATTACATCCGGCCGCTACACCTAGC TCCACCTTCAAACAAGGAATATCGTTGATGTCACTGTATCGCCGTCTAGTTCTGCTGTCTTGTCTCTCAT GGCCGCTGGCTGGCTTTTCTGCCACCGCGCTGACCAACCTCGTCGCGGAACCATTCGCTAAACTCGAACA GGACTTTGGCGGCTCCATCGGTGTGTACGCGATGGATACCGGCTCAGGCGCAACTGTAAGTTACCGCGCT GAGGAGCGCTTCCCACTGTGCAGCTCATTCAAGGGCTTTCTTGCTGCCGCTGTGCTGGCTCGCAGCCAGC AGCAGGCCGGCTTGCTGGACACACCCATCCGTTACGGCAAAAATGCGCTGGTTCCGTGGTCACCCATCTC GGAAAAATATCTGACAACAGGCATGACGGTGGCGGAGCTGTCCGCGGCCGCCGTGCAATACAGTGATAAC GCCGCCGCCAATTTGTTGCTGAAGGAGTTGGGCGGCCCGGCCGGGCTGACGGCCTTCATGCGCTCTATCG GCGATACCACGTTCCGTCTGGACCGCTGGGAGCTGGAGCTGAACTCCGCCATCCCAGGCGATGCGCGCGA TACCTCATCGCCGCGCGCCGTGACGGAAAGCTTACAAAAACTGACACTGGGCTCTGCACTGGCTGCGCCG CAGCGGCAGCAGTTTGTTGATTGGCTAAAGGGAAACACGACCGGCAACCACCGCATCCGCGCGGCGGTGC CGGCAGACTGGGCAGTCGGAGACAAAACCGGAACCTGCGGAGTGTATGGCACGGCAAATGACTATGCCGT CGTCTGGCCCACTGGGCGCGCACCTATTGTGTTGGCCGTCTACACCCGGGCGCCTAACAAGGATGACAAG TACAGCGAGGCCGTCATCGCCGCTGCGGCTAGACTCGCGCTCGAGGGATTGGGCGTCAACGGGCAGTAAG GCTCTGAAAATCATCTATTGGCCCACCACCGCCGCCCTTGCGGGCGGCATGGATTACCAACCACTGTCAC ATTTAGGCTAGGAGTCTGCGCGGCAGAGCCGTGTGACCGGTTTTCTGTAGAGCACTGACGATGGCGGCGG CGCTCTCTGCAATTGGCAAGGCGTCGGCGCCAAGGATACCAATCTTGCGGCGCGCGGCGTGTTATGACGA CTGGGGTGCATTTGAGCCGCCCCATTTAACCTTCGCCCTCACAGATACGCCATTCGCCTCAGATTTAGCG CCATGCAGACGAGCTTCCACTCGGCTTGCACCTTGTCCAGGCCCCTCATGCTGAACTGACGCAATCCCAT CACCGCCTTGATCCAACCATTCGGAGCCTCCACGATCGACTTGCGCCGGCGGTAAGCTGCATCGCCTTGC TCCGTTTTCAATTTCGCCGCAATCGCCGCCGTATGCGGATGGGTCTTGGCATTGACCTTGGCATCTTCAC GTCCCTCGCGGCCGAGGGCAACGATGACATCGCCGTGGTGATCGGCGACCTTTGCCAGAACAGCCTCACT ACGGAATCCCGCATCCGCCAGCGTCTGGGCCGGCATTTCTCCGGTGTTGGCCTGAACTGCTGCCAGCATG CCCAGCAGCGCCTGACTGTCCGCGGCGCAGTTGGTCAACTCCGCCGCCACGATGATCTGGTGCTCGGCAT CGACCGCTGTGTACCCGTTGTAGCTCTGCTCGGAGCCACCACCGGCGTGTTTCATGATCCGGCTGTCCGG ATCGGTGAAGCTTTCCTGATCACGGTCATCCGGCACACCAAACTCGCGTTTGTACGAGCCACCGCCCTTG TCCGAGCCATCCGGATGGCGAGGCCGGCGGCCATCGTCTTCGCTGCGCCCCCGGGCCTGGTCCGCTTCAC GCTGGCGCGCTTCCAGGCGCGCCTTTGCCGCCTGGATCGCCTCCAGGCGCTTCTCGCGGCGAGAAATCTC GGCAGGAATGTCCAGCTCCGGCTCGTTACGCTCCTGGTCGTCGGTAGCCTTGGCGCGATCAAGCAGCGCC TTGATCTCGCAATGCAATTCGTCCTCGGCCGGCTTCATGCGCTTATAGCTCATCGCCTTGTGGCGGCTGG CGTTGGCTTTTACCTTGGTGCCGTCGACCGCGATCGTGCCAAGCTTCACCAGCCCACATTCGCGCGCCAG TTGCACCACCTGAACGAACAAATTCTCAAGCTCGGTCAGGTGTAGGGCACGGAAGTCACTCAGCGTGCGG TGGGCCGGGAAGTTTCCAGCGGCCAGCACACGCAACGCGACATCCTCGTACAGCTTCCTGGCTAGTTTGC GCGAAGAGAAGACGCCGCTCGCGTAACCATAGATCAGCACTTTGACCATCATCGCCGGATGAAACGGCTG ATTGCCCGGACCACCGCCGGCATACCGGGCGTGGAATGCGCTCAAGTCCAGCGTATCGACAGTCTCGCTG ATGAAGTAGGCAAGATGCCCTTCAGGTAGCCACTCTCCCAGAGAAGGGGGCAGCAGATAGGATTGGTCGG GTCGGTAAGGAAGGTAACTGGCAGCCATCCCCGTATCGTCCTCGATCTTCCGCCGATTTGGCTTCTGCCG CGCAGGCTCCTAGGCCACCGTAGCTAAACATACGAGAAAAACCGCTTCTTGAGCGCTCTCTGAGACCACC TTGCCGACAACGCAGAAACGGTTGCGGAAAAATCGGCGTTTCCGGCGTACGCCACCCGACCTGGACGAAC TATTGCGGACCTGGAACTGGAGTAGCGGAATTCCCCGGGGTTTCAGCGTCGCGCCACAGCGCCTCAGATA GATGCGGTAGCCTTTGGCGGGTCGTCATGCCGCGGACCACCCCCCCAAAAAATTCCACAATGCGGAATGG CGGAATTTTCTGGGGTTCCCGCTTACCCCCCCATTCAGCAGTTTCACAGTCAGGAATTTTTAAACTCACT CCAAGGCACAACACAATTTGCGGGTACCGATTACCGCAGCAAAGACCTCACACCGAAAAAATCAAGGCTA CTGGCTGACACCATTTCAGCTGTTTATCTCGATGGCTATGAAGGCAGACAGTAAGTGGATTTACCATAAC GCGTCATTACGCGCACCGCTCAGACGGGCTCAGGGCGTTTCCGGCGGCTACGGGATAAAACAGGCAACAA CCCCCCCGGAAAACTGCCGGAAACGCGCCCGATAAATTTTATCCTAATGCATGCCTATGCACGCAACTGC ATGGCATATGTTTTGACGTAAAATGGATGCCGTAAGCCCTTTTTTACCGACTTTCTGCTTCATCAGCCTG ACTGACACGACCATATTCTTTCAGACCGCCCCCTGCTAAACTTCCTTCATATTGCCGCATTAACCCGGGA GGCTCCGCAATGAGCAACACTACACACTACGAAAACGCCAACTTTCTTCGGGAACTGGCTGAAAGCCTGC CCCGCATACTGCCGGAAGGTGGCCCGGACAAAGCTGCGCTGTTGCAGCGACTGGCTAACGAAGAACTGGC CCAGGCAGAGTATGAAGATCAGGTTCGCGCCAAAGTGACCGCCGCCCGTGCTGACACGCGTCCGGGTATG ACCACGGAACAACTCCGCCAGCGCCTGCATGGCCGTTATCAGGAACTGCGCGATGCCGTATGACGTGGAA TGGAAGCAGGGAGCCATCGAGGATGTAACGACGCTGTTTGACTATATCGCGGAAAATTCATCCCTGTGGG ATGCGCAGAACGTTACCGACCGGGTTCTCGCTGCGGCGGACAAACTGGCCGACTTCCCGCGACTCTATGA AGTGGACTCACGCTATGGCGAGGACGTTCGCCGGATCAGTCTGATGGGACAGCATGTCCTCTATGATGTT GATGACCAGACCAGAAAAGTCCGGGTTCTGGCCGTGGTCGGCCAGCGCCAGAATCCCCATATTGTTCTCT AATAACCGGTGACGGGGACGCAATTCATTGCGTGGCCGTCGCCGGTTGGACAAGCACAGCGCGTCAGCGT TTTCCCCACGGCCACCACCGGCGCGGTGTTCCGGCCGGGGTCTCTGCTGTCTCCGGTTTGTGTTCCAGCA GTCTCATGGACTGCATTTCCTGCCGTAGCCCGGCCACCTCCTCCCTGAGTGCTTTTATCTCCGCGATCAA CGCGTCGGAGGCCATTTTTTCAGTCTCACCCGACAGTCTCAACTCGTCCCGCTCGTGAGTCTCATCCTGT CTTAACTCACCGTACACCCGGATAAGCTCGCTGGTATCCACCACCCGGCCGCCATCAGCTTCCGTACGGT ATGATACGCGGCCTTTCGCCATATCCCGATACAGGGAACTTCGGGCTTTACCCGTCAGTTCCGTCGCCTG TCTCACCGTCACCCACGCCATTGTCTCACCCCGCTATTTTTGAGACAGTATACCTGACAGGCGCACACCA TGCCCGGAAGGAAAGAATCATGACAAAACAGGAAAAAACAGCCCTCAATATGGCTAAATTTATTAAGGAG CAGTCGCTGCTATTGCTCGATAAACTGAATGAGCTGGATATGGATACCCCGGCCGACATGTGCGAGCGGC TACACGAGGATGCGGAAACACTCTGGCAGGTGATGCGGGATAAGCTCGGGGAGGAATAACAGCACCGGCA TGGCCGGTGCTGGCATTTATTTTTTGCCGAACGGCCACCACCGGCGGGCAGGTTTGTCCTCCGGCAGTTC AGGTACCGGCACGTTAAAATAGCGGCTGTTATATTCCCGCATCAGCTCCGCTTTCAGCTTCTCGTTCACC GCGCTTTCCCCGTGCCGCTCACTCACCACGTCAATCATCGCGTTAATCTGCTCCGGTGAGCACTTCCCGG CATCAACCACCTGCACACCGTTCTCGATGGCGAACCGCTCCACCTTGCGATAGAGGTAATCACACAGCTT CATTCCTGTGGGTTTGTTCCGTTCCCATTGCGGATTTTTACCAGTGAAAAAGTACGTGGCTTTTTCGTCG CTGTTGAGCCGCTCGTCATACATCCCGATGGATTTCATCATCGCCAGATGCTGGGCCCGGTCGACAAAAC AGAAAACATACGCCCCGGTCTGCCAGGCGAGCACCACCATATCTTCCAGATGCTCGCTGGTCGGCATGAT GCAGCGCTCGCCGTTCCGGTCCTCCGCGTCTTCAATAAATACCATGTACAGCGCCATAATCCCTCACTCC GTTGTCATAAATTTAAAGCACGCAAACAACCGTTCACGATCCAGCTCTGCCGTTTTGCGGGCCTCGCCGG TCTGTGGGTTCACGATTTCATCCACCGACAGGATTGCCCGCTGCACCCTGACCTGCGTCGCCCGGTCCGG GCAGATGTACCAGATTTCATCGATGCCGTTAGCTTTGCGGTTGAACAGATACCCGGACACCACTTCCTGA TACCGGCGACGGCTCTTGACGGTGCGCTCCACCTCAAACGCCACCGTTTTACCGTCCAGCTCCGCCAGGG CGTCCGGCACTTTCATGCCTTTAAGACTCAGACGGTGCAGAATGCGCCAGCCGGTGGCCCCTCTGGCTTC CATATCAAGGCGCAGGGATTGCACGGCCAGCCGGTGCGGCAGATGTGCTGCCGACACCCTTGACGGCTGA AACGGAATAACATCCGCCAGCGGTTCGTCCTCGTCGAACGAGAACGCCACGCCATGCGGCGTCAGCCCCC ACACGCTGACCTGACGGCCGTCCACCGGATATTTGGTCCGGACCAGCAGCCCTTTCGCCACCAGGCTGTC GAGGAAGCGGTAGACCGGCTGCACCGCCGCAATCCCCAGCCGCCGCGCAACCAGCTCCGCCGTGGAACAC AGCTCTTCCCGCAACCAGCGCAGGGTCAGCCGGGTTTTCTCCGCGTTCCGCGCCTGTCGTTTCGCGTGGC TGACGTTGTACAGCTCCAGCGCCATCAGTAAATCCCCGCAAAATCATCATCCGCTTTCGGCCCGCCGCCG TCGGCCGGGGGCCGGAACTCCGCCAGGGGATCGGTTTTCGCCAGCACCGGGAAACGCTGCAACGGGATTT CCCGGCGCTCAACCCGCAGCGGACTGCTGAACGCCATCCGGGCCACACCCAGCCCGGTCATGACCGCGAA CCCGTCCGGCAGGTGTTGCAGGGTGTTCACGTCAAACAGCGGCCGCGCCTCCTTCTGGATGAAGCTGTCC CCGCTGATATGCTCCACGTTCCCCGCCTCCCGGCTGGCACGGCGGCGCTCCACGTCCACCCTGATTTCCC CGGTCTGCCCCGCCGCCCACTGCGCGGACTCCAGGCTGGCCGCCCGGTAAAACCAGCGGATCGGCGTGTT ATCCAGTACCGTGGTTTTCACAAATTCAGCGGGCAGATCCTGCCCGCACTGCCCGAAATCGCCCAGCGAC TGGTGCGCGAGCAACAGATTGCAGTCCCGGCTGCGCAGCGTCCCCAGTGCGTTCAGTACATACTTCGACA GCAGATATTTAATTTCATCGAGCATCACGCTGACGTGTGGCCACTCCCGGAACTCGTCCCGCGCAATGAT GATTTGCGCGCAGCGGGCAAACAGCATTTTTTGCACACGGATCACCGCCTCGTCGTCCATCGAGCCGATA ACGTACAGGCAGCCGCCGCCGTTGATAATCCCCGCCACATCGATGCCACTGTCCGTCTGCAGGACGCTCA GGTCAGCGACGTTTTCCAGCCTAGTGATCAACCCCTTCACGTCCTTTTTCAGGGCCTCCGGCAGCGCGTA CGCCGCCGCCAGCACCTGCTGAATGTTTGCCCCCTGCGGAAACTGCTCCGCAATCAGCTTCGCCGCTTTC TGCTCGCTGATGCGGTAGTGGTCCGCCACGTCGCCGGTCTCGCCCAGGTTAAGCCCGGCAATCAGCAGGT TTTTCAGCGCGTACTGGTCGAGATCGCGGAACAGATTCAGCTGCGCCGGTTTCCCCGGCCGCAGATCCAG CAGGGTGAAGTCCGGACAGTGCGCCCGGAAGACGTGCGGCGCCCATGCGTCCCCTTTGGGGTCGAAGTAC ACCACCGCGTCCCCGAAATCGCGTACGCAGCGAATGAGCGCGTTGGTGGCCATCACGCTCTTGCCGCTCC CGGGCAGGCCGAGGATCTGAATGTTGGTCTTGCGCCAGGTATCACGCGGAACCAGCACCGGCTTGCCCTG CTCATCCTTACCCAGAAACACCGCCTGCTCCTGCCGGGCCTGCTCCGAGGAAAAATCGGCCAGCGCATTA ACCGGTACCGGCTCCCCGAAATGCAGGTGGCGCACGTCGGTCATCTCTCCTGTCCGCTGGCTGCTGCGCC GGCTCTCCTGATTCAGTTTCGCGTTCACCGCCTCGTCAGCAGCCGCAAAATGACCGTCAAGCAGCAGGAA CGCCAGCAGCCGCGCCAACACAATCCCGACAGCCAGCCCGCCCGCGCACCAGGCAATCCCGAACAGGTTA GCCGGCTGCAGCAGGTAATAATCTGCGTTTGCGTAGAGGTCCGGACGCAGGACGGTTTCTCCCCAGCTCT CGATAAACACGGCGACAACCAGCCCCCCCAGAAGGGCCAGACCGGCCGCGCCGGTCAGCCAGTACGCGTA GTTCCAGACATGTCGACGTGCCCTGACCATCCGCCCGGGCGAATCCAGCGAGGCCAGCACCGAAAATGGC GCTGGCCGTTTATTATCGCGCTTATAGCGATCGGCATACTCCCGTCGCTCCTTATGACTCAGCCCCACAA AACGCATCCGTCCGGCCCAAAGTTCAGCCAGACCGAAAAACAGGCCGATAACTAGGAAAGCCCCGGCCAG ACCGTAATACTCCTGGTACAGCCAGCTGACCCACGGATAAATCTGCCGGGCCAGCTCCGGAATGTGCCAC TTCCAGGCAAGCGAATCCGTATTAAACATGTTCTCTCTCCTTCAGACGATGGTTTGCCGGCGTGATGTGC AGCCCCCGCTGCACAAGCCGCGGACATGCCCCAAGGCATGGCGGCGGCGGTCACGTCCGTGGTGATTGCG TTCAGCTTTCACCACGGAGGCCAGCCTCTTTCCGCCCCATGCGGAAAAGGCGCAGCCCCGGAGGAACAAC GAGCACGCCCCAGCGTGTGAGAGGAAAAGGCGGCACCCCAGTGCGGTCTTTTCCGGTGTTCCGGCCCCCG TCAGAGTTCGCCATAGCGAGCGGCTGACCACCCGCAAAATCAGGAGCAGCTTTGCTGCTTCGCCAGGTGC GTCCAGCACCGTGGATTTTTGTGGGTGGTCAGGCGTGAGCCTGACGGGGGCCGGGTGAATTTCTGGCGTG GCCGGCGTCCAGCCGGACGGAGCCAGAAAGAGGGGGAGAGACCGTGCGTCGGTGGCGTCCAGCCAGCGTA AGCAGGGGATATCCCCCTGAGGTCAGCCACGCCCTCGCGGGGATGACCTGTATTTCTCCGTAAGGAGAAA AAAGCAACAGAGATAGGTTAACGTAAAATGTTCAGCGAAAAACCGATATGATTCACCTATCCTGGTAATT TATTATCAGGGAATATAAAGACTTAATCAGGGGACAATATGCCACATCAGCGCGTCCGGTGTCCGTCTTG TAGGTGCCGGGGAAATTGCGCCTCCTCGCTCACTCGGTCGCTACGCTCCGGCCGTGAGACTGCGGCGGGC GCTGCGGACACATGCAAAGTTACCCACAGATTCCGTGAATAAGCAGGGGACTAACATGTGAGGCAAAACG GCAAGGCCACGCAGGTGGCGTTTTTCCATAGGCTCCGCCCTCCTGACTGAGTTCACATAAACAGACGCTT TTTCGGTGCATCTGTGGGAGCCGGTGGCTCAACCATGAATCAGTCAGGAGTGGCGAAACCCGACAGGACT TAAAGATCATCACCGTTTCCGATGAATCGCTCCCTCTTGCGCTCTCCTGTTCCAACCCTGCCGTTTCCCG GATACCTGTTCCGCCTTTCTCCCTTGCGGGAAGTGTGGCGCTTTCTCATAGCTCACACTCTGGTATCTCG GCTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTAAGCAAGAACCCCCCGTTCAGCCCGACTGCTGCGC CTTATCCGGTAACTGTTCACTTGAGTCCAACCCGGAAAAGCACGCAAAACGCCACTGGCAGCAGCCATTG GTAACTGGGAGTTCGCAGAGGATTTGTTTAGCTAAACACGCGGTTGCTCTTGAAGTGTGCGCCAAAGTCC GGCTACACTGGAAGGACAGATTTGGTTGCTGTGCTCTGCGAAAGCCAGTTACCACGGTTAAGCAGTTCCC CAACTGACTTAACCTTCGATCAAACCACCTCCCCAGGTGGTTTTTTCGTTTACAGGGCAAAAGATTACGC GCAGAAAAAAAGGATCTCAAGAAGATCCTTTGATCTTTTCTACTGAACCGCGATCCCCGTCAGTTCAGAG GAGGACGATGGTGCCACCGTTCCACCCTGAACATCCCGGATATAGTTTGCCTGACATGCGACCAGAAGAA AGCCTGAAAAAATCAATATAAAAAGAAAAACAACCTTTACCTTTTTCATATACCTTCCCTGTATTTAAAA ACCCCGGTATTCATCCCTGAACACCGGAAGTCTGTATTTCAAATCATCCTTGATAACTTTTGCTTACCAG TTACCATCCCGGTAAACAAAGGATACAAAGTAATCAAATTTACTAATATCGATTACATTTTTAAAGTGTG GCTGTAATATCGAAACCCATGATTTTTCAACATCAAACCAACCATTATTAATATTATCCTTTAAAGGCAT CCCCAGACTTTCAATGACAGAACCATCATCACCGAAGTCTTTTGAGTATTCACCACCTTTAAACTCTTCG GTTTTCTTATCAAACCAATGAATATGTAATTTAAGCCCCATATTTACCTCTTAAAGATATTTTTTAATGT TTCGTTTTGGATCCGGCCCTTTAACCTGCTTACCCGTTTTTGGATCGAATGCCCCGAGGTGTTCGCCATC ACTGGCGCGGTACCCTTCAAGCTCACCGTGCTGGGAATCCCATTCATAAATTTTACGCTTTTTATCACCA TACCATCGGGCCCGCTTACCACCACCACCTTGTTTAGGGGTTTTAGGTTTACCCTCTTTCAACTCTCCCA ACCCCTTAATATCTTCAGTCTTGGGATCAGGAAAATAATCATGGCCGTAATCTTTAGTTCCCTTACGAGG TTTTTTCTTTTCCTCATTTAATTTATTTTCTGCATCCTTCGCTTTTTTCTCCTTTTGTTTCCGGCTCTCC ATCGCCCCGGAAAGCGCAGCCTTATCCCTGGATAAGGATTCATTCATTTCGTTTAAAGATGTCTGGGCAG CTTTTAATTTCTCATTCTGATTCTGAATATCCTTATCAAGATAGCGAACCTGATCCTGCCACCCGGAGCC ATATTCATGAGGCGGGTTATAAGTCACAAAATCATCTTTATTTGCCTCTGCCTCTTTTACCTTTTTATCG GCTTCCTGAACAGCAGCCCTTGCACCGGGGATCGCCTTCTCTGTCGATGCAATGCGACTGTTTAAGGTCG CAATATTTTTA
Region | 1 |
Region Length | 20.7Kb |
Completeness(score) | incomplete(40) |
Specific Keyword | transposase |
Region Position | 52-20782 |
# tRNA | 0 |
# Total Proteins | 11 |
# Phage Hit Proteins | 9 |
# Hypothetical Proteins | 2 |
Phage + Hypothetical Protein % | 100% |
# Bacterial Proteins | 0 |
Attachment Site | yes |
# Phage Species | 6 |
Most Common Phage Name(hit genes count) | PHAGE_Salmon_SJ46_NC_031129(3) PHAGE_Entero_fiAA91_ss_NC_022750(2) PHAGE_Thermu_OH2_NC_021784(1) PHAGE_Salisa_1_NC_017983(1) PHAGE_Lactoc_98201_NC_031064(1) PHAGE_Pseudo_F10_NC_007805(1) PHAGE_Entero_Mu_NC_000929(1) PHAGE_Gordon_Utz_NC_030921(1) PHAGE_Shigel_Stx_NC_029120(1) PHAGE_Escher_pro483_NC_028943(1) |
First Most Common Phage # | 3 |
First Most Common Phage % | 27.27% |
GC % | 57.62% |
Region: | The number assigned to the region. |
Region Length: | The length of the sequence of that region (in bp). |
Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
Region Position: | The start and end positions of the region on the bacterial chromosome. |
# tRNA: | The number of tRNA genes present in the region. |
# Total Proteins: | The number of ORFs present in the region. |
# Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
# Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
# Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
Attachment Site: | The putative phage attachment site. |
# Phage Species: | The number of different phages that have similar proteins to those in the region. |
Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
GC %: | The percentage of GC nucleotides of the region. |
Questionable (score 70-90)
Incomplete (score < 70)
Region: | The number assigned to the region. |
Region Length: | The length of the sequence of that region (in bp). |
Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
Score: | The score of the region based on the above criteria. |
# Total Proteins: | The number of ORFs present in the region. |
Region Position: | The start and end positions of the region on the bacterial chromosome. |
Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
GC %: | The percentage of GC nucleotides of the region. |
Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
- If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
- If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
- If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
- If the size of the region is greater than 30 Kb, the score will be increased by 10.
- If there are at least 40 proteins in the region, the score will be increased by 10.
- If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
gi|00000000|ref|CP020075.1| Klebsiella pneumoniae strain AR_0115 plasmid tig00000005, complete 22062, gc%: 57.29%
Download details as .txt file: detail.txt file_download
Hits against Bacterial Database or GenBank File
Region 1, total 13 CDS
# | CDS Position | BLAST Hit | E-Value | Sequence |
---|---|---|---|---|
1 | complement(52..357) | PROPHAGE_Brucel_1330: transposase, putative; AM362_30140; phage(gi23502708) | 6.56e-10 | Showinfo_outline |
2 | complement(505..1365) | PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; AM362_30145; phage(gi100066) | 5.20e-57 | Showinfo_outline |
3 | 1258..1269 | attL | 0.0 | Showinfo_outline |
4 | complement(1548..2105) | PHAGE_Salisa_1_NC_017983: hypothetical protein; AM362_30150; phage(gi388570712) | 1.47e-29 | Showinfo_outline |
5 | 2269..3168 | PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; AM362_30155; phage(gi100060) | 7.55e-24 | Showinfo_outline |
6 | complement(3220..4935) | PHAGE_Gordon_Utz_NC_030921: hypothetical protein; AM362_30160; phage(gi100031) | 1.22e-05 | Showinfo_outline |
7 | 5045..8074 | PROPHAGE_Xantho_306: Tn5044 transposase; AM362_30165; phage(gi21243163) | 0.0 | Showinfo_outline |
8 | 8181..9206 | PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; AM362_30170; phage(gi557307612) | 2.30e-44 | Showinfo_outline |
9 | 9203..9982 | PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; AM362_30175; phage(gi557307613) | 8.13e-78 | Showinfo_outline |
10 | 9979..10209 | hypothetical protein; AM362_30180 | 0.0 | Showinfo_outline |
11 | complement(10296..10352) | hypothetical protein; AM362_30185 | 0.0 | Showinfo_outline |
12 | 10369..11250 | PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; AM362_30190; phage(gi100066) | 3.32e-94 | Showinfo_outline |
13 | 20782..20793 | attR | 0.0 | Showinfo_outline |
>complement(52..357)
KlebsiellapneumoniaeFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
>complement(505..1365)
KlebsiellapneumoniaeMSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGASLIKHW
>1258..1269
ATCTTCAGCATC
>complement(1548..2105)
KlebsiellapneumoniaeMRIFGYARVSTSQQSLDIQIRALKDAGVKANRIFTDKASGSSTDREGLDLLRMKVEEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVAVRFIDDGISTDGDMGQMVVTILSAVAQAERRRILERTNEGRQEAKLKGIKFGRRRTVDRNVVLTLHQKGTGATEIAHQLSIARSTVYKILEDERAS
>2269..3168
KlebsiellapneumoniaeMPVDFLTTEQTESYGRFTGEPDELQLARYFHLDEADKEFIGKSRGDHNRLGIALQIGCVRFLGTFLTDMNHIPSGVRHFTARQLGIRDITVLAEYGQRENTRREHAALIRQHYQYREFAWPWTFRLTRLLYTRSWISNERPGLLFDLATGWLMQHRIILPGATTLTRLISEVREKATLRLWNKLALIPSAEQRSQLEMLLGPTDCSRLSLLESLKKGPVTISGPAFNEAIERWKTLNDFGLHAENLSTLPAVRLKNLARYAGMTSVFNIARMSPQKRMAVLVAFVLAWETLALDDALDVL
>complement(3220..4935)
KlebsiellapneumoniaeMKTGQTTASSSTPVGFPDADSLAALRGWYAGLSSRAAVEHYLAARKAAGQSARGMLGHIRRQLIVFANSRHRPDLADVFQHAPEERQGRAGAVERAIRLLPTLPAPKPQISDSIDQWLSPRTVRALQAYGIHTLSALTVRIPRRRGWWKAIEGLGMTGARQVEAFFAAHPQLTERARALIPIIQPSGIVPWEQLRLPNEVDGSQGNFRAPRNACTLNATNDYEAVQAWLALHETVATQRAYRKEAARLILWAIVERGRALSSLTTDDAIAYRAFVRHPTPRERWVGPPRPRDSVEWRPFSGGLSARSAAYALTVLSALFRWLIEQRYVLANPFAGVKVRGHALRPALDTARGFTEGEWLLLRAIADGLEWSYGWSEPAAQRLRFMLDFGYATGLRASELVGAVLGNVRLDEHGDHWLHLVGKGGKPGKVALPPLAYTALDQYLAQRQLPVSRERWNPKTPLVGSLGEDGNAGITGPHLWCVLRRFFTQAAEAIEADHPVAAEKLRRATPHWMRHSHASHALARGAQLTAVRDNLRHASIATTSMYLHGDELERARQMRQAFGARHVKRGVD
>5045..8074
KlebsiellapneumoniaeMSKKNKLLSVLSDAEQEALYGLPEFDDAQQLEYLAVTETELALANSRPSLHAKVYCLLQIGYFKAKHAFFSFDWDEVEDDCAFVLSRYFHGEVFEPKAITKHERYTQREQIAKLFGYWPWSAAFLPQLEQQAARTVRRDVTPGFVAAELIVWLNEHKIIRPGYTTLQELVSETLSAERRRLGNLLEQALDESAKAALSQLLVRDDTLSQLAALKQDAKNFGWRQMVREREKRATLEPLHAIAKTLLPKLDVSQQNLLYYASLANFYTVHDLRNLKADQTQLYLLCYAWVRYRQLSDNLVDAMAYHMKQLEDESSAGAKQSFADEQVRRQQETPRVGRLLSLYVDDSVADPTPFGEVRQRAYKIMPRDTLQTTAQRMSVKPASKLALQWQAVDGLADRMRRHLRPLYVALDLSGSNPDSPWLAALAWAKGVFAKQQRLSQRPLDEWPAATLPKRLRPYLLTFDADGKPTGLHADRYEFWLYRQIRKRLQSGELYLDDSLQHRHFSDELVEMDRKIDVLAKMEIPFLQQPVHAQLDALTAELRTQWLAFNRELKQGKLTHLEYNKDTQKLTWRKPKSENEKAREKAFYEKLPFCDVADVFRFVNDECKFLSAFTPMQPRYAKKVADADSLMAVIIAQAMNHGNHVMARTSDIPYHVLDSGYQQYLRQATLHAANDCISNAIATLPIFPYYSFDLETLYGAVDGQKFSVERPTVKARYSRKYFGRGKGVVAYTLLCNHIPLNGYLIGAHDYEAHHVFDIWYRNTSDIMPTAITGDMHSVNKANFAILHWFGRRFEPRFTDLNAQLKELYCADDPAQYQACLIRPVGKIDCDLIHREKPNIDRIVATLGLKEMTQGTLIRKLCTYTTTNPTRRAIFEFDKLIRSIYTLRYLRDPQLERNVHRSQNRLESYHQLRSAIAQVGGKKELTGRTDIEIEISNQCARLIANTIIFYNSAILSRLVTKYEAAGNSKALALITKISPAAWRHILLNGHYTFQSSGKTIDLDAIVAGLELE
>8181..9206
KlebsiellapneumoniaeMLTQEQTVEIRVLARQGHSIRHIARTLGVSRNTVRRYLRDPSVARYQPREPRPTKLGPFESYLRQRVEQAHPIWLPATVLNREIRAQGYGGGLSLLRAFLATLKPARREAGPAVRFETEPGRQLQADFVVLRRARSPMSAFVATLGYSRMTFVTFVPDESFESVRDSLLLAFDYLGGVPREVLFDNMKTVVLERDAYGDGKHRFHPGLLQLADDLGFRIRLCRPYRAQTKGKVERFNRYFRESFYNPLLTRMKGTGLLLDCAAANRRVRDWLADEANVRVHATLNERPIDRWRQEREHLQPLPSRVRRDEAPLLDNSLRPVPLESLQHPLSVYDAIGEACR
>9203..9982
KlebsiellapneumoniaeMNLQHERIDALCQQLKLERVATHYPVLAQQAVREDFSFTDFLEHLLRHEAGCRQQRSRELLTRMACFPGIKTLEDYDFSFNPGVPKALVQELGSLAFVERAENVVLIGPSGIGKTHLAIALGYKAAQAGVKTRFITAADLMLQLSTAQRQGRLKEYFNRAILGPRLLVIDEIGYLPFGREEANLFFQVVAKRYEKGAMILTSNLPFSQWADAFAGDTTLTAAMLDRLLHHAHILTLSGESYRLKDKRKAGVVRKNSKPE
>9979..10209
KlebsiellapneumoniaeMIQVGQYYFGDSGVKWVSFQLVLTPAYPRCYLRAPIVGAWPGLPEAVRNVDAEVRRGGRPMNADLIRFSIALDVVVP
>complement(10296..10352)
KlebsiellapneumoniaeLKVELGVAAGCNQAATAGI
>10369..11250
KlebsiellapneumoniaeMSLYRRLVLLSCLSWPLAGFSATALTNLVAEPFAKLEQDFGGSIGVYAMDTGSGATVSYRAEERFPLCSSFKGFLAAAVLARSQQQAGLLDTPIRYGKNALVPWSPISEKYLTTGMTVAELSAAAVQYSDNAAANLLLKELGGPAGLTAFMRSIGDTTFRLDRWELELNSAIPGDARDTSSPRAVTESLQKLTLGSALAAPQRQQFVDWLKGNTTGNHRIRAAVPADWAVGDKTGTCGVYGTANDYAVVWPTGRAPIVLAVYTRAPNKDDKYSEAVIAAAARLALEGLGVNGQ
>20782..20793
ATCTTCAGCATC
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Click on a region in the genome above to show details here.
ORF Start: 52
ORF Stop: 357
Strand: Backward
Protein Sequence: FINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: AM362_30140, transposase, putative, phage(gi23502708), PROPHAGE_Brucel_1330
Homolog/Ortholog E-Value: 6.56e-10
ORF Start: 505
ORF Stop: 1365
Strand: Backward
Protein Sequence: MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGASLIKHW
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: AM362_30145, hypothetical protein, phage(gi100066), PHAGE_Salmon_SJ46_NC_031129
Homolog/Ortholog E-Value: 5.20e-57
ORF Start: 1258
ORF Stop: 1269
Strand: Forward
Protein Sequence: ATCTTCAGCATC
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attL
Homolog/Ortholog E-Value: N/A
ORF Start: 1548
ORF Stop: 2105
Strand: Backward
Protein Sequence: MRIFGYARVSTSQQSLDIQIRALKDAGVKANRIFTDKASGSSTDREGLDLLRMKVEEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVAVRFIDDGISTDGDMGQMVVTILSAVAQAERRRILERTNEGRQEAKLKGIKFGRRRTVDRNVVLTLHQKGTGATEIAHQLSIARSTVYKILEDERAS
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: AM362_30150, hypothetical protein, phage(gi388570712), PHAGE_Salisa_1_NC_017983
Homolog/Ortholog E-Value: 1.47e-29
ORF Start: 2269
ORF Stop: 3168
Strand: Forward
Protein Sequence: MPVDFLTTEQTESYGRFTGEPDELQLARYFHLDEADKEFIGKSRGDHNRLGIALQIGCVRFLGTFLTDMNHIPSGVRHFTARQLGIRDITVLAEYGQRENTRREHAALIRQHYQYREFAWPWTFRLTRLLYTRSWISNERPGLLFDLATGWLMQHRIILPGATTLTRLISEVREKATLRLWNKLALIPSAEQRSQLEMLLGPTDCSRLSLLESLKKGPVTISGPAFNEAIERWKTLNDFGLHAENLSTLPAVRLKNLARYAGMTSVFNIARMSPQKRMAVLVAFVLAWETLALDDALDVL
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: AM362_30155, hypothetical protein, phage(gi100060), PHAGE_Salmon_SJ46_NC_031129
Homolog/Ortholog E-Value: 7.55e-24
ORF Start: 3220
ORF Stop: 4935
Strand: Backward
Protein Sequence: MKTGQTTASSSTPVGFPDADSLAALRGWYAGLSSRAAVEHYLAARKAAGQSARGMLGHIRRQLIVFANSRHRPDLADVFQHAPEERQGRAGAVERAIRLLPTLPAPKPQISDSIDQWLSPRTVRALQAYGIHTLSALTVRIPRRRGWWKAIEGLGMTGARQVEAFFAAHPQLTERARALIPIIQPSGIVPWEQLRLPNEVDGSQGNFRAPRNACTLNATNDYEAVQAWLALHETVATQRAYRKEAARLILWAIVERGRALSSLTTDDAIAYRAFVRHPTPRERWVGPPRPRDSVEWRPFSGGLSARSAAYALTVLSALFRWLIEQRYVLANPFAGVKVRGHALRPALDTARGFTEGEWLLLRAIADGLEWSYGWSEPAAQRLRFMLDFGYATGLRASELVGAVLGNVRLDEHGDHWLHLVGKGGKPGKVALPPLAYTALDQYLAQRQLPVSRERWNPKTPLVGSLGEDGNAGITGPHLWCVLRRFFTQAAEAIEADHPVAAEKLRRATPHWMRHSHASHALARGAQLTAVRDNLRHASIATTSMYLHGDELERARQMRQAFGARHVKRGVD
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: AM362_30160, hypothetical protein, phage(gi100031), PHAGE_Gordon_Utz_NC_030921
Homolog/Ortholog E-Value: 1.22e-05
ORF Start: 5045
ORF Stop: 8074
Strand: Forward
Protein Sequence: MSKKNKLLSVLSDAEQEALYGLPEFDDAQQLEYLAVTETELALANSRPSLHAKVYCLLQIGYFKAKHAFFSFDWDEVEDDCAFVLSRYFHGEVFEPKAITKHERYTQREQIAKLFGYWPWSAAFLPQLEQQAARTVRRDVTPGFVAAELIVWLNEHKIIRPGYTTLQELVSETLSAERRRLGNLLEQALDESAKAALSQLLVRDDTLSQLAALKQDAKNFGWRQMVREREKRATLEPLHAIAKTLLPKLDVSQQNLLYYASLANFYTVHDLRNLKADQTQLYLLCYAWVRYRQLSDNLVDAMAYHMKQLEDESSAGAKQSFADEQVRRQQETPRVGRLLSLYVDDSVADPTPFGEVRQRAYKIMPRDTLQTTAQRMSVKPASKLALQWQAVDGLADRMRRHLRPLYVALDLSGSNPDSPWLAALAWAKGVFAKQQRLSQRPLDEWPAATLPKRLRPYLLTFDADGKPTGLHADRYEFWLYRQIRKRLQSGELYLDDSLQHRHFSDELVEMDRKIDVLAKMEIPFLQQPVHAQLDALTAELRTQWLAFNRELKQGKLTHLEYNKDTQKLTWRKPKSENEKAREKAFYEKLPFCDVADVFRFVNDECKFLSAFTPMQPRYAKKVADADSLMAVIIAQAMNHGNHVMARTSDIPYHVLDSGYQQYLRQATLHAANDCISNAIATLPIFPYYSFDLETLYGAVDGQKFSVERPTVKARYSRKYFGRGKGVVAYTLLCNHIPLNGYLIGAHDYEAHHVFDIWYRNTSDIMPTAITGDMHSVNKANFAILHWFGRRFEPRFTDLNAQLKELYCADDPAQYQACLIRPVGKIDCDLIHREKPNIDRIVATLGLKEMTQGTLIRKLCTYTTTNPTRRAIFEFDKLIRSIYTLRYLRDPQLERNVHRSQNRLESYHQLRSAIAQVGGKKELTGRTDIEIEISNQCARLIANTIIFYNSAILSRLVTKYEAAGNSKALALITKISPAAWRHILLNGHYTFQSSGKTIDLDAIVAGLELE
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: AM362_30165, Tn5044 transposase, phage(gi21243163), PROPHAGE_Xantho_306
Homolog/Ortholog E-Value: 0.0
ORF Start: 8181
ORF Stop: 9206
Strand: Forward
Protein Sequence: MLTQEQTVEIRVLARQGHSIRHIARTLGVSRNTVRRYLRDPSVARYQPREPRPTKLGPFESYLRQRVEQAHPIWLPATVLNREIRAQGYGGGLSLLRAFLATLKPARREAGPAVRFETEPGRQLQADFVVLRRARSPMSAFVATLGYSRMTFVTFVPDESFESVRDSLLLAFDYLGGVPREVLFDNMKTVVLERDAYGDGKHRFHPGLLQLADDLGFRIRLCRPYRAQTKGKVERFNRYFRESFYNPLLTRMKGTGLLLDCAAANRRVRDWLADEANVRVHATLNERPIDRWRQEREHLQPLPSRVRRDEAPLLDNSLRPVPLESLQHPLSVYDAIGEACR
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: AM362_30170, IS21 transposase, phage(gi557307612), PHAGE_Entero_fiAA91_ss_NC_022750
Homolog/Ortholog E-Value: 2.30e-44
ORF Start: 9203
ORF Stop: 9982
Strand: Forward
Protein Sequence: MNLQHERIDALCQQLKLERVATHYPVLAQQAVREDFSFTDFLEHLLRHEAGCRQQRSRELLTRMACFPGIKTLEDYDFSFNPGVPKALVQELGSLAFVERAENVVLIGPSGIGKTHLAIALGYKAAQAGVKTRFITAADLMLQLSTAQRQGRLKEYFNRAILGPRLLVIDEIGYLPFGREEANLFFQVVAKRYEKGAMILTSNLPFSQWADAFAGDTTLTAAMLDRLLHHAHILTLSGESYRLKDKRKAGVVRKNSKPE
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: AM362_30175, IS21 transposition protein, phage(gi557307613), PHAGE_Entero_fiAA91_ss_NC_022750
Homolog/Ortholog E-Value: 8.13e-78
ORF Start: 9979
ORF Stop: 10209
Strand: Forward
Protein Sequence: MIQVGQYYFGDSGVKWVSFQLVLTPAYPRCYLRAPIVGAWPGLPEAVRNVDAEVRRGGRPMNADLIRFSIALDVVVP
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: AM362_30180, hypothetical protein
Homolog/Ortholog E-Value: N/A
ORF Start: 10296
ORF Stop: 10352
Strand: Backward
Protein Sequence: LKVELGVAAGCNQAATAGI
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: AM362_30185, hypothetical protein
Homolog/Ortholog E-Value: N/A
ORF Start: 10369
ORF Stop: 11250
Strand: Forward
Protein Sequence: MSLYRRLVLLSCLSWPLAGFSATALTNLVAEPFAKLEQDFGGSIGVYAMDTGSGATVSYRAEERFPLCSSFKGFLAAAVLARSQQQAGLLDTPIRYGKNALVPWSPISEKYLTTGMTVAELSAAAVQYSDNAAANLLLKELGGPAGLTAFMRSIGDTTFRLDRWELELNSAIPGDARDTSSPRAVTESLQKLTLGSALAAPQRQQFVDWLKGNTTGNHRIRAAVPADWAVGDKTGTCGVYGTANDYAVVWPTGRAPIVLAVYTRAPNKDDKYSEAVIAAAARLALEGLGVNGQ
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: AM362_30190, hypothetical protein, phage(gi100066), PHAGE_Salmon_SJ46_NC_031129
Homolog/Ortholog E-Value: 3.32e-94
ORF Start: 20782
ORF Stop: 20793
Strand: Forward
Protein Sequence: ATCTTCAGCATC
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attR
Homolog/Ortholog E-Value: N/A
Terminase
Portal Protein
Coat Protein
Tail Shaft
Integrase
Phage-like Protein
Other
Transposase
Plate Protein
tRNA
Download data as .txt file: png_input file_download