Submission Results

Sequence Name: Not Available

GenBank Accession Number: 116493574

GenInfo (GI) Number: 0000000000

Download Results: 116493574.PHASTER.zip

gi|00000000|ref|NC_008526.1| Lactobacillus paracasei ATCC 334 chromosome, complete genome. 2895264, gc%: 46.62%

Download summary as .txt file: summary.txt file_download

Total: 4 prophage regions have been identified, of which 1 regions are intact, 2 regions are incomplete, and 1 regions are questionable.

RegionRegion LengthCompletenessScore# Total ProteinsRegion PositionMost Common PhageGC %Details
136.3Kbintact10050497885-534247 info_outlinePHAGE_Lactob_iA2_NC_028830(6)44.39%Show info_outline
248.4Kbquestionable90731902327-1950805 info_outlinePHAGE_Lactob_PLE3_NC_031125(25)44.52%Show info_outline
313.2Kbincomplete60111984948-1998245 info_outlinePHAGE_Entero_phi92_NC_023693(4)43.82%Show info_outline
49Kbincomplete30102039044-2048063 info_outlinePHAGE_Bacill_G_NC_023719(2)47.11%Show info_outline
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Region: The number assigned to the region.
Region Length: The length of the sequence of that region (in bp).
Completeness: A prediction of whether the region contains a intact or incomplete prophage based on the above criteria.
Score: The score of the region based on the above criteria.
# Total Proteins: The number of ORFs present in the region.
Region Position: The start and end positions of the region on the bacterial chromosome.
Most Common Phage: The phage(s) with the highest number of proteins most similar to those in the region.
GC %: The percentage of GC nucleotides of the region.

Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:

  1. If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
Method 2:
  1. If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
Method 3:
  1. If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
  2. If the size of the region is greater than 30 Kb, the score will be increased by 10.
  3. If there are at least 40 proteins in the region, the score will be increased by 10.
  4. If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
Compared the total score of method 2 with the total score of method 3, the bigger one is chosen as the total score of the region.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.

gi|00000000|ref|NC_008526.1| Lactobacillus paracasei ATCC 334 chromosome, complete genome. 2895264, gc%: 46.62%

Download details as .txt file: detail.txt file_download

Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File

Region 1, total 53 CDS

#CDS PositionBLAST HitE-ValueSequence
1497885..498814PHAGE_Lactoc_P087_NC_012663: putative cysteine synthase; LSEI_0480; phage(gi229605000)2.27e-100Showinfo_outline
2complement(499004..499246)hypothetical protein; LSEI_04810.0Showinfo_outline
3499316..499591PHAGE_Lactob_phiAT3_NC_005893: putative transposase A; LSEI_0482; phage(gi48697273)1.02e-09Showinfo_outline
4499621..500451PHAGE_Lactob_phiAT3_NC_005893: putative transposase OrfB; LSEI_0483; phage(gi48697274)2.16e-31Showinfo_outline
5complement(500570..500938)hypothetical protein; LSEI_04840.0Showinfo_outline
6501060..501131tRNA0.0Showinfo_outline
7501215..501226attL0.0Showinfo_outline
8complement(501259..502428)PHAGE_Lactob_iA2_NC_028830: hypothetical protein; LSEI_0486; phage(gi971747651)2.75e-81Showinfo_outline
9complement(502541..502801)PHAGE_Lactob_Lrm1_NC_011104: hypothetical protein; LSEI_0487; phage(gi195661240)1.23e-13Showinfo_outline
10502891..503511hypothetical protein; LSEI_04880.0Showinfo_outline
11complement(503495..503731)hypothetical protein; LSEI_04890.0Showinfo_outline
12complement(503732..503839)hypothetical protein; LSEI_04900.0Showinfo_outline
13complement(503924..504631)PHAGE_Lister_A118_NC_003216: gp34; LSEI_0491; phage(gi16798817)3.91e-07Showinfo_outline
14complement(504790..505212)PHAGE_Lactob_iLp84_NC_028783: toxin-antitoxin system; LSEI_0492; phage(gi971743093)2.07e-26Showinfo_outline
15complement(505205..505558)PHAGE_Lactob_PLE2_NC_031036: hypothetical protein; LSEI_0493; phage(gi100029)2.74e-23Showinfo_outline
16505802..506050PHAGE_Lactob_CL2_NC_028835: transcriptional regulator; LSEI_0494; phage(gi971748039)9.29e-51Showinfo_outline
17506092..506292PHAGE_Lactob_iA2_NC_028830: hypothetical protein; LSEI_0495; phage(gi971747660)9.29e-16Showinfo_outline
18complement(506263..507096)hypothetical protein; LSEI_04960.0Showinfo_outline
19507157..507915PHAGE_Lactob_PLE2_NC_031036: hypothetical protein; LSEI_0497; phage(gi100031)5.74e-54Showinfo_outline
20507916..508095hypothetical protein; LSEI_04980.0Showinfo_outline
21complement(508088..508339)hypothetical protein; LSEI_04990.0Showinfo_outline
22508405..508761PHAGE_Lactob_iA2_NC_028830: hypothetical protein; LSEI_0500; phage(gi971747661)3.16e-06Showinfo_outline
23508761..508853PHAGE_Lactob_iA2_NC_028830: hypothetical protein; LSEI_0501; phage(gi971747662)2.92e-13Showinfo_outline
24508846..509049hypothetical protein; LSEI_05020.0Showinfo_outline
25complement(509032..509577)PHAGE_Strept_phiARI0131_2_NC_031941: hypothetical protein; LSEI_0503; phage(gi100032)3.57e-11Showinfo_outline
26509758..509976hypothetical protein; LSEI_05040.0Showinfo_outline
27complement(509992..510651)PHAGE_Staphy_phiPV83_NC_002486: transposase; LSEI_0505; phage(gi9635740)6.72e-34Showinfo_outline
28511011..511127hypothetical protein; LSEI_05060.0Showinfo_outline
29511120..511866PHAGE_Lactob_iA2_NC_028830: DnaD domain-containing protein; LSEI_0507; phage(gi971747668)5.06e-44Showinfo_outline
30511881..512705PHAGE_Lactob_iA2_NC_028830: DNA replication protein; LSEI_0508; phage(gi971747669)2.03e-154Showinfo_outline
31512705..513223DNA polymerase III subunit epsilon-like 3'-5' exonuclease; LSEI_05090.0Showinfo_outline
32513270..513692PHAGE_Entero_EFC_1_NC_025453: replication terminator protein; LSEI_0510; phage(gi725950528)6.84e-21Showinfo_outline
33513694..514431PHAGE_Entero_EFC_1_NC_025453: hypothetical protein; LSEI_0511; phage(gi725950529)3.56e-61Showinfo_outline
34514443..514730PHAGE_Lactob_A2_NC_004112: hypothetical protein; LSEI_0512; phage(gi22296571)5.27e-50Showinfo_outline
35514800..515132hypothetical protein; LSEI_05130.0Showinfo_outline
36515647..516090PHAGE_Lactob_PLE3_NC_031125: recombination endonuclease subunit; LSEI_0514; phage(gi100056)6.05e-104Showinfo_outline
37516604..517257hypothetical protein; LSEI_05150.0Showinfo_outline
38517508..518506PHAGE_Staphy_StauST398_4_NC_023499: putative transposase; LSEI_0516; phage(gi588498272)6.87e-70Showinfo_outline
39complement(518702..518920)PHAGE_Lactob_LF1_NC_019486: hypothetical protein; LSEI_0517; phage(gi418489439)9.25e-13Showinfo_outline
40519343..520173PHAGE_Lactob_PL_1_NC_022757: hypothetical protein; LSEI_0518; phage(gi557308044)0.0Showinfo_outline
41520188..520466PHAGE_Lactob_CL2_NC_028835: GcrA cell cycle regulator; LSEI_0519; phage(gi971748068)2.89e-61Showinfo_outline
42520453..520788PHAGE_Lactob_iLp1308_NC_028911: ribonucleoside-diphosphate reductase; LSEI_0520; phage(gi971754965)6.32e-69Showinfo_outline
43520785..520895hypothetical protein; LSEI_05210.0Showinfo_outline
44522131..522406PHAGE_Lactob_phiAT3_NC_005893: putative transposase A; LSEI_0523; phage(gi48697273)1.02e-09Showinfo_outline
45522436..523266PHAGE_Lactob_phiAT3_NC_005893: putative transposase OrfB; LSEI_0524; phage(gi48697274)6.21e-31Showinfo_outline
46523581..523739hypothetical protein; LSEI_05250.0Showinfo_outline
47523828..524226hypothetical protein; LSEI_05260.0Showinfo_outline
48524238..524504hypothetical protein; LSEI_05270.0Showinfo_outline
49524523..524699hypothetical protein; LSEI_05280.0Showinfo_outline
50524701..524928hypothetical protein; LSEI_05290.0Showinfo_outline
51524971..526212hypothetical protein; LSEI_05300.0Showinfo_outline
52526190..527758PHAGE_Achole_L2_NC_001447: envelope protein; LSEI_0531; phage(gi9626524)2.75e-05Showinfo_outline
53534247..534258attR0.0Showinfo_outline

Region 2, total 75 CDS

#CDS PositionBLAST HitE-ValueSequence
11902327..1902578PHAGE_Lactob_phiAT3_NC_005893: putative transposase A; LSEI_1906; phage(gi48697273)2.77e-53Showinfo_outline
21902718..1903473PHAGE_Lactob_phiAT3_NC_005893: putative transposase OrfB; LSEI_1907; phage(gi48697274)0.0Showinfo_outline
31903845..1903871attL0.0Showinfo_outline
4complement(1904004..1904228)PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1908; phage(gi100024)2.13e-42Showinfo_outline
5complement(1904273..1905571)PHAGE_Lactob_Lrm1_NC_011104: lysin; LSEI_1909; phage(gi195661219)0.0Showinfo_outline
6complement(1905582..1906028)PHAGE_Lactob_PLE2_NC_031036: hypothetical protein; LSEI_1910; phage(gi100022)1.34e-77Showinfo_outline
7complement(1906021..1906311)PHAGE_Lactob_Lrm1_NC_011104: hypothetical protein; LSEI_1911; phage(gi195661217)1.38e-61Showinfo_outline
8complement(1906374..1906529)PHAGE_Lactob_Lb338_1_NC_012530: hypothetical protein; LSEI_1912; phage(gi226377755)1.03e-14Showinfo_outline
9complement(1906544..1906879)PHAGE_Lactob_iLp1308_NC_028911: hypothetical protein; LSEI_1913; phage(gi971754934)7.99e-23Showinfo_outline
10complement(1906891..1910940)PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1914; phage(gi100019)0.0Showinfo_outline
11complement(1910937..1912904)PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1915; phage(gi100018)0.0Showinfo_outline
12complement(1912976..1913992)PHAGE_Staphy_phiPV83_NC_002486: transposase; LSEI_1916; phage(gi9635740)1.59e-43Showinfo_outline
13complement(1914099..1917434)PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1917; phage(gi100017)0.0Showinfo_outline
14complement(1917427..1917780)PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1918; phage(gi100016)4.35e-82Showinfo_outline
15complement(1917879..1918214)PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1919; phage(gi100015)1.30e-75Showinfo_outline
16complement(1918301..1918933)PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1920; phage(gi100014)3.48e-128Showinfo_outline
17complement(1918945..1919349)PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1921; phage(gi100013)9.59e-96Showinfo_outline
18complement(1919350..1919715)PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1922; phage(gi100012)1.13e-82Showinfo_outline
19complement(1919712..1920014)PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1923; phage(gi100011)1.21e-66Showinfo_outline
20complement(1920019..1920393)PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1924; phage(gi100010)3.83e-80Showinfo_outline
21complement(1920729..1921748)PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1925; phage(gi100007)0.0Showinfo_outline
221921841..1922116PHAGE_Lactob_phiAT3_NC_005893: putative transposase A; LSEI_1926; phage(gi48697273)1.02e-09Showinfo_outline
231922146..1922976PHAGE_Lactob_phiAT3_NC_005893: putative transposase OrfB; LSEI_1927; phage(gi48697274)1.80e-31Showinfo_outline
24complement(1922962..1923465)PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1928; phage(gi100006)8.80e-61Showinfo_outline
25complement(1923478..1924116)PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1929; phage(gi100005)2.95e-148Showinfo_outline
26complement(1924234..1924764)hypothetical protein; LSEI_19300.0Showinfo_outline
27complement(1924761..1925087)PHAGE_Clostr_phiCT453A_NC_028991: hypothetical protein; LSEI_1931; phage(gi100030)1.49e-06Showinfo_outline
28complement(1925097..1926095)PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1932; phage(gi100004)0.0Showinfo_outline
29complement(1926061..1927488)PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1933; phage(gi100003)0.0Showinfo_outline
30complement(1927493..1928746)PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1934; phage(gi100002)0.0Showinfo_outline
31complement(1928730..1929302)PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1935; phage(gi100001)4.73e-129Showinfo_outline
32complement(1929371..1929505)hypothetical protein; LSEI_19360.0Showinfo_outline
33complement(1929688..1930836)PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1937; phage(gi100059)0.0Showinfo_outline
341931030..1931251PHAGE_Strept_PH15_NC_010945: hypothetical protein; LSEI_1938; phage(gi190151424)1.83e-06Showinfo_outline
35complement(1931444..1932091)hypothetical protein; LSEI_19390.0Showinfo_outline
36complement(1932400..1932828)PHAGE_Lactob_PL_1_NC_022757: transcriptional regulator; LSEI_1940; phage(gi557308042)8.95e-102Showinfo_outline
371933029..1933301hypothetical protein; LSEI_19410.0Showinfo_outline
38complement(1933343..1933561)PHAGE_Lactob_CL2_NC_028835: transcriptional regulator; LSEI_1942; phage(gi971748065)5.15e-44Showinfo_outline
39complement(1933574..1933642)PHAGE_Lactob_PLE3_NC_031125: sliding clamp; LSEI_1943; phage(gi100053)4.18e-05Showinfo_outline
40complement(1933639..1934139)PHAGE_Lactob_Lb338_1_NC_012530: hypothetical protein; LSEI_1944; phage(gi226377807)6.13e-47Showinfo_outline
41complement(1934150..1934380)PHAGE_Lactob_PL_1_NC_022757: cytosine-specific methyltransferase; LSEI_1945; phage(gi557308034)1.44e-27Showinfo_outline
42complement(1934377..1934787)PHAGE_Lactob_A2_NC_004112: hypothetical protein; LSEI_1946; phage(gi22296564)3.06e-60Showinfo_outline
43complement(1934784..1934963)hypothetical protein; LSEI_19470.0Showinfo_outline
44complement(1934956..1935282)hypothetical protein; LSEI_19480.0Showinfo_outline
45complement(1935272..1935823)PHAGE_Lactob_phiAT3_NC_005893: hypothetical protein; LSEI_1949; phage(gi48697298)6.27e-75Showinfo_outline
46complement(1935820..1936059)PHAGE_Lactob_Lrm1_NC_011104: hypothetical protein; LSEI_1950; phage(gi195661242)1.11e-16Showinfo_outline
47complement(1936072..1936437)PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1951; phage(gi100052)2.07e-84Showinfo_outline
48complement(1936434..1936688)PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1952; phage(gi100051)1.08e-49Showinfo_outline
49complement(1936689..1937018)PHAGE_Lactob_phiAT3_NC_005893: hypothetical protein; LSEI_1953; phage(gi48697292)2.02e-48Showinfo_outline
50complement(1937015..1937797)PHAGE_Lactob_phiAT3_NC_005893: DnaC; LSEI_1954; phage(gi48697291)0.0Showinfo_outline
51complement(1937784..1938584)PHAGE_Lactoc_28201_NC_031013: hypothetical protein; LSEI_1955; phage(gi100012)3.72e-08Showinfo_outline
52complement(1938651..1939211)PHAGE_Bacill_phi105_NC_004167: hypothetical protein; LSEI_1956; phage(gi22855034)1.71e-18Showinfo_outline
53complement(1939214..1940137)PHAGE_Acinet_vB_AbaS_TRS1_NC_031098: hypothetical protein; LSEI_1957; phage(gi100039)2.86e-32Showinfo_outline
54complement(1940134..1940754)PHAGE_Lactob_Sha1_NC_019489: phage protein; LSEI_1958; phage(gi418489843)8.21e-23Showinfo_outline
55complement(1940751..1940918)hypothetical protein; LSEI_19590.0Showinfo_outline
56complement(1940911..1941162)PHAGE_Lactob_iLp84_NC_028783: hypothetical protein; LSEI_1960; phage(gi971743102)1.73e-09Showinfo_outline
57complement(1941150..1941278)PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1961; phage(gi100043)4.15e-22Showinfo_outline
58complement(1941291..1941500)hypothetical protein; LSEI_19620.0Showinfo_outline
59complement(1941506..1942012)PHAGE_Lactob_LBR48_NC_027990: putative transcription regulator; LSEI_1963; phage(gi937456713)2.01e-22Showinfo_outline
60complement(1942070..1942228)hypothetical protein; LSEI_19640.0Showinfo_outline
611942316..1942804hypothetical protein; LSEI_19650.0Showinfo_outline
62complement(1942764..1943006)PHAGE_Lactoc_PLgT_1_NC_031016: recombination endonuclease subunit; LSEI_1966; phage(gi100058)8.07e-14Showinfo_outline
63complement(1943003..1943248)PHAGE_Lactoc_50101_NC_031040: hypothetical protein; LSEI_1967; phage(gi100003)5.06e-06Showinfo_outline
641943378..1944061PHAGE_Staphy_2638A_NC_007051: ORF016; LSEI_1968; phage(gi66395466)4.05e-18Showinfo_outline
651944077..1944925hypothetical protein; LSEI_19690.0Showinfo_outline
661944984..1945589PHAGE_Lactob_iLp84_NC_028783: hypothetical protein; LSEI_1970; phage(gi971743092)7.40e-141Showinfo_outline
671945690..1946460PHAGE_Staphy_80_NC_030652: hypothetical protein; LSEI_1971; phage(gi100016)3.90e-07Showinfo_outline
68complement(1946437..1946592)hypothetical protein; LSEI_19720.0Showinfo_outline
691946729..1947154PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1973; phage(gi100030)2.02e-99Showinfo_outline
701947178..1947381PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1974; phage(gi100029)1.08e-39Showinfo_outline
711947436..1948278PHAGE_Lactob_LF1_NC_019486: chromosome partitioning ATPase; LSEI_1975; phage(gi418489414)1.96e-35Showinfo_outline
721948295..1948690hypothetical protein; LSEI_19760.0Showinfo_outline
731948695..1949351hypothetical protein; LSEI_19770.0Showinfo_outline
741949483..1950646PHAGE_Strept_phiARI0131_2_NC_031941: hypothetical protein; LSEI_1978; phage(gi100037)1.78e-47Showinfo_outline
751950805..1950831attR0.0Showinfo_outline

Region 3, total 11 CDS

#CDS PositionBLAST HitE-ValueSequence
11984948..1985964PHAGE_Staphy_phiPV83_NC_002486: transposase; LSEI_2007; phage(gi9635740)1.25e-43Showinfo_outline
21986192..1987121PHAGE_Staphy_phiPV83_NC_002486: transposase; LSEI_2008; phage(gi9635740)5.51e-60Showinfo_outline
3complement(1988491..1989549)PHAGE_Lactoc_BK5_T_NC_002796: hypothetical protein; LSEI_2010; phage(gi14251157)4.85e-19Showinfo_outline
41989950..1990609PHAGE_Spirop_1_R8A2B_NC_001365: putative transposase; LSEI_2011; phage(gi9626114)2.77e-27Showinfo_outline
5complement(1990929..1991771)PHAGE_Entero_phi92_NC_023693: Phi92_gp064; LSEI_2012; phage(gi726646997)1.81e-42Showinfo_outline
6complement(1991846..1992871)PHAGE_Synech_ACG_2014f_NC_026927: long tail fiber distal subunit; LSEI_2013; phage(gi100279)1.49e-42Showinfo_outline
7complement(1992874..1993446)PHAGE_Entero_phi92_NC_023693: Phi92_gp065; LSEI_2014; phage(gi726646998)1.76e-41Showinfo_outline
8complement(1993458..1994330)PHAGE_Entero_phi92_NC_023693: Phi92_gp066; LSEI_2015; phage(gi726646999)7.96e-127Showinfo_outline
9complement(1994760..1995614)hypothetical protein; LSEI_20160.0Showinfo_outline
10complement(1995754..1997154)lipopolysaccharide synthesis sugar transferase; LSEI_20170.0Showinfo_outline
11complement(1997310..1998245)PHAGE_Synech_ACG_2014f_NC_026927: rIII lysis inhibition protein; LSEI_2018; phage(gi100233)2.61e-38Showinfo_outline

Region 4, total 10 CDS

#CDS PositionBLAST HitE-ValueSequence
1complement(2039044..2039703)PHAGE_Spirop_1_R8A2B_NC_001365: putative transposase; LSEI_2053; phage(gi9626114)2.77e-27Showinfo_outline
2complement(2040346..2041320)PHAGE_Synech_ACG_2014f_NC_026927: long tail fiber distal subunit; LSEI_2054; phage(gi100279)1.66e-39Showinfo_outline
32041749..2042402acyltransferase; LSEI_20550.0Showinfo_outline
4complement(2042683..2043183)PHAGE_Strept_Dp_1_NC_015274: QueT; LSEI_2056; phage(gi327198320)4.77e-16Showinfo_outline
5complement(2043295..2044008)PHAGE_Prochl_P_TIM68_NC_028955: hypothetical protein; LSEI_2057; phage(gi971760361)7.70e-08Showinfo_outline
6complement(2044005..2044229)PHAGE_Bacill_G_NC_023719: gp59; LSEI_2058; phage(gi593777527)3.75e-13Showinfo_outline
7complement(2044514..2044825)PHAGE_Shigel_SfII_NC_021857: CI repressor; LSEI_2059; phage(gi526244671)1.22e-06Showinfo_outline
8complement(2045085..2045723)phosphoglycerate mutase; LSEI_20600.0Showinfo_outline
9complement(2046032..2047009)PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; LSEI_2061; phage(gi371496158)1.19e-25Showinfo_outline
10complement(2047011..2048063)PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; LSEI_2062; phage(gi371496158)1.90e-23Showinfo_outline
Lactobacillus paracasei ATCC 334 chromosome, complete genome
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Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)

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Length: 2895264 bps
Phages: 4
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Click on a sequence to see details.
Lysis
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Fiber Protein
Plate Protein
tRNA

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