Submission Results
Sequence Name: Not Available
GenBank Accession Number: 1176943408 open_in_new
GenInfo (GI) Number: 0000000000 open_in_new
Download Results: 1176943408.PHASTER.zip
gi|00000000|ref|MUMQ01000088.1| Klebsiella pneumoniae subsp. pneumoniae strain KPN_KPC_HUG_12 60925, gc%: 51.56%
Download summary as .txt file: summary.txt file_download
Total: 2 prophage regions have been identified, of which 0 regions are intact, 2 regions are incomplete, and 0 regions are questionable.
| Region | Region Length | Completeness | Score | # Total Proteins | Region Position | Most Common Phage | GC % | Details |
|---|---|---|---|---|---|---|---|---|
| 1 | 8.9Kb | incomplete | 60 | 12 | 352-9350 info_outline | PHAGE_Entero_P1_NC_005856(2) | 60.23% | Show info_outline |
| 2 | 3.2Kb | incomplete | 60 | 6 | 49241-52469 info_outline | PHAGE_Entero_P1_NC_005856(2) | 53.08% | Show info_outline |
Region DNA
>1 352-9350 TTACTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAAC GACAGTGACTTCCTGCCCAGCCTTGCCAGATGCTGCCTCAGATTCAGGTTATGCCGCTCAATGCGCTGCG TATATCGCTTGCTGATAACGTGCAGTTCTCCCTTCAGGCGTGATTCATAAAGCGGCCAGCCATCCGTCAT CCATACCACGACCTCAAAGGCCGACAGCAGGCCCAGAAGACGCTCCAGCGTGGACAACGTGCGTTCACCG AATACGTGCGCCACAACCGTCCTCCGTATCCTGTCATACGCGTAAAACAACCAGCGCTGGCGTGATTTAG CACCGACGTAACCCCACTGTTCGTCCATTTCCGCGCAAACAATGACGTCACTGCCCGGTTGTATGCGTGA GGTTACCGACTGCGGTCTGAGTTTTTTAAGTGACGTAAAATCGTGTTGAGGCCAACGCCCATAATGCGGG CGGTTGCCCGGCATCCAACGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGCTGAGAGGC GGTGTAAGTGAACTGTAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTG CTTTTGCCGTTACGCACCACGCCTTCAGTAGCGGAGCAGGAAGGACATCTGATGGAAATGGAAGCCACCC GCACAGCGCGCTGGGATATCACTCCCCGAGGGAATACCGGCAGCGGACATCGTTAACTTAAGATACAAAA GCTGTTCGGAGATGGAGGGTCAAGATCAGGGTGACCTGCGCCATGATGTTATCCGAGCCCTGTTTCCTAA TCACTACACCGGTATTTGATTACCCAGGTCAACTTCAGGCTGTTACAGGGACGGCAACCGTGTCAGCACA TCCTTGAGATAGGCATACGGATCGTGCCCATTATTACGGGCCGACTGGATCAAACTCATGATCGCAGCAG CGCGCTTGAGTATGCGAACCCACGCCGAGCATTTGAGAAGGCAACGGGATGAACGCTGGCTGGATAGCCG TGGTTTTCTGGGTAGGCAGCCGAATCCATTTGTGGTCGAGGTTGGCATTGAGGCTGTAGCCCAAGGCGAT GTTTGCGATGGAGGCACCGGGTTCAGAACACTCCTGAATGACCTGAGCCTTGAAAGATTTGCTGTAGGTA CGGCGCTGAGGGCGCATGGAAAATCCGCTTGATGGGCCATGGCCTTCGGCGGCGGTGTCGGGAAGGTGTG TTGGCCGGACGGATACTGTTGAACTACGTTGTCTGGGGCAACGGAAGTGTTTCGGCCCGACTCTGGAACG CGATCCGCAGCGACGACTGGGCAATTCCGCACGTTAGCCTGAGCAGCCTCGGGGAAATCGTCGTCTGGGC GCGCCCAGACGAGTTTCCGCCAAGGAACATGCAGACGAGCAAGGGGCTGCGGGCACTCGGCTACAACGTG AGGATCGGTGTTTGATCGAGGCGCCTGTGGTACACGCAGGCTGACGAGCCAGGCGCTGTCCATTGCCTGA TCAGACCGCCCCGCTGCGCCTTGCCTGAGCAGTTGACCTGCATCAATGGGGCGGGAGAACGCTGTACATT GACTCTTGAAGGCTGTCATGGTAAGCGTAATATCTTACAAAGTATTACAAGGATTTCCTTGGCCGGAACC GCAAAGCGACGCGATTGGAGAGGGTGAGATGAAAGCGCACCTACAGGGATGAAAGCGCACCTACAGGTGA TTTTCACGCTCGATGAATTGGCTGCGTACTTGAAAGTCGGCAAGCGGACGCTTTATCGGCTCGCCGCGCA CGGGGAAATTCCGGCTTTCAAGGTGGGCGGGACGTGGCGGTTTCCTCAAAGTGAAATCGATCAGTGGATC AATGATCAGACCCGAGCCGCAGCAAAGAAGGAGGTGATGCGCAAGCGTGAACAGCAGAAGTCATCCGAGC AGCCCGTGTCGCCTGGGCGCACTGCCCGTCACAGCAGGCAAAGGGCTTGAGTAACTCGTTTTCCAATTTT TCTGGAGGTATGACATGGACATCGATTTCAAGAAGTTGGCTCCCTGGAACTGGTTCAAGAACGAGCAGCA AGAGCAGCAGACCGTCTCTTCCCTGCCGGTGCAGCGCAATGACCTGCCAGCGGCGAGCGGGCCAGTCAGC CCGATCCTGCAACTGCATCGGGAAATCGACCGGCTGTTCGATGACGCATTCCGGGGCTTCGGTTTTCCGG CGTTGAACATGCCGCAGTGGCCATCCGATTGGTCGGGCATGCTGAAGCCGGCCCTGGACATCCAGGAAAC CGACAAGCAGTACAAGATTGCCCTGGAAGTGCCCGGTGTCGAGGAGAAGGACATCCAGATCACTCTCGAC AACGACGTGCTGATGGTGCGTGGCGAGAAGCGCCAGGAACAGGAGAAGAAGGAAGGTGGCTTCCACCGTG TGGAGCGCTCCTACGGCAGCTTTCAGCGTGCCTTGAACCTGCCTGACGACGCCAACCAGGATTCGATCAA AGCATCGTTCAAGAACGGGGTGCTCACGGTCACGATCGACAAGCGCGAGGTCAGCGCGCCGAAGCAGGGA CGCTCGATCCCGATCAACGGCTGACGTCGCCGGCTCGTTCGTCACAAGAAAAACCCGGCACGAGACGAGG AGTCGCGGTTCGCGATGCCTCGTCGCCTCAACCTTGTCAACCTTGTCAACCTTCTCAGGAGCATCAGCAT GGCCAGAAAACAATGCCAGGTCTGCGGCCAACCCGCCACCGTGCGGGTGGAAGCCAATCTCAACGGTCGT CACAGCACCATGCTGTTGTGCGACGACCATTACCGGCAATTAGTGCGCCAGCAAAAGCGCACCGTTTCGC CGCTGGAAGCCTTGTTCGGCTCGCGCAGCGGCCTGTTCGAGGACTTCCTCGGCAGTGACTTCTTCCGCAT CGGCGACGACGCGACGCCAGTTGCCGCCGATACCGATGACGTGGTCGATGCCTCGTTTGGCGAGCCCGCC GCCGCAGGTTCGGGTGCGCCGCGCCGTCGCGGCAGTGGGCTGGCCAGCCGCATCAGCGAACAGTCGGAAG CCTTGCTGCAGGAGGCCGCCAAACACGCTGCCGAATTTGGCCGCTCCGAGGTGGATACCGAACATCTGCT GCTGGCGCTGGCCGACAGCGACGTGGTCAAGACCATCCTGGGTCAGTTCAAGATCAAGGTCGATGACCTC AAGCGGCAGATCGAGTCTGAGGCCAAGCGCGGGGACAAGCCCTTCGAGGGCGAGATCGGCGTGTCGCCGC GCGTGAAGGATGCGCTCAGCCGCGCCTTCGTGGCCTCCAATGAACTCGGCCATTCTTATGTCGGTCCAGA GCATTTCCTGATCGGTCTGGCTGAGGAAGGCGAAGGGCTGGCCGCCAACCTGCTGCGCCGCTACGGCCTG ACGCCGCAGGCGCTGCGCCAACAGGTCAGCAAGGTGGTCGGCAAGGGCGCCGAGGATGGCCGCGCTGAGA CGCCGACCAACACGCCAGAACTCGACAAGTACTCGCGCGACCTGACCAAGATGGCGCGCGACGGCAAGCT CGACCCGGTGATCGGCCGCGCGCAGGAGATCGAAACCACCATCGAGGTGCTGGCCCGGCGCAAGAAGAAC AACCCGGTGCTGATCGGCGAGCCGGGTGTGGGCAAGACCGCCATCGTCGAAGGGCTGGCGCAGCGCATGG TGGCGGGTGAAGTGCCCGAGACCTTGCGCGACAAGCGCCTGGTGGAACTCAACATCAACGCCATGGTGGC CGGCGCCAAATATCGCGGCGAGTTCGAGGAGCGCGTGCAGAAGGTGCTGAAGGAGGTGACCGAGCACCAG GGCGAGCTGATTTTGTTCATCGACGAGGTGCACACCATCGTCGGTGCCGGCCAGGGCGGTGGCGAAGGCG GGCTGGACGTGGCCAACGTGTTCAAACCGATGATGGCGCGCGGTGAACTCAACCTGATCGGCGCCACGAC GCTGAACGAGTACCAGAAATACATCGAGAAGGATGCCGCACTGGAGCGGCGCTTCCAGCCGGTGACGGTA CCCGAGCCGACGGTGGCCCAGGCCATCATGATTCTGCGCGGCCTGCGCGACACCTTCGAGGCGCACCACA AGGTCAGCATCTCCGAGGACGCGATCATCGCGGCGGCCGAGTTGTCCGACCGCTACATCACGGCGCGCTT CCTGCCGGACAAGGCGATCGACTTGCTCGACCAGGCGGCCGCGCGCGTGAAGCTGTCGGCCACGGCCCGG CCGGTGGCCGTGCAGGAGCTGGAGTCCGAACTGCACCAGCTGCGGCGTGAACAGGATTACGTGGCCGCGC GCAAGCAGTACGACCAGGCCGCCGAGCTCGGGAAGCGCATCGAAGCCAAGGAGGCCGAGCTCAAGAAGCT CGTCGAGGACTGGGAGCGGGAGCGGGCCTCCGGCAGTGCCGAGGTCAAGGCGGAACACGTGGCGCAGATC GTCTCGCGCCTGACCGGCATCCCGGTCAACGAGTTGACGGTGGAAGAGCGCGAAAAGCTGCTGCACTTGG AACAACGGCTGCACGAGCGCCTGGTGGGACAAGACGAGGCGGTCCGTGCCGTGGCCGATGCCGTGCGGCT GTCCCGCGCCGGCCTGCGTGAAGGCAGCAAACCGGTGGCTACCTTCCTGTTTCTGGGCCCGACCGGGGTG GGCAAGACCGAGCTCGCCAAGGCATTGGCCGAATCGATCTACGGCGATGAGCACGCCCTGTTGCGCATCG ACATGTCGGAATATGGCGAACGCCATACCGTGGCGCGATTGGTGGGCGCGCCTCCGGGCTATGTCGGTTA CGACGAAGGCGGTCAGCTCACCGAGAAGGTGCGGCGCAAGCCCTACAGCGTGCTGCTGCTCGACGAGATC GAGAAGGCACACCCTGACGTATACAACATCCTGCTGCAAGTGTTCGACGACGGTCGCCTCACCGACGGCA AGGGCCGGGTGGTGGATTTCACCAACACCATCATCATCGCCACGTCCAACCTGGGTTCGGACATCATCCA GCGACGGCTGAAGGCGCGCGGGGCGGCCGGCGAGGAGTACGAAAAGACCAAGGCCGGAGTCATGGACGTG CTGCGCGGCCATTTCCGGCCCGAGTTCCTCAACCGCATCGACGAGATCATCGTCTTCCATGCGCTGGGCA AGGAGGAGATCCGCCACATCGTCGGCCTGCAGCTCGATCGCGTGGCGCGCAGCGCCGCCAGCCAGGGCGT GACGCTCACTTTCGATCAGACGCTGATCGACCATTTCGCGGAAGAAGGCTACAAGCCCGAGTTCGGTGCG CGTGAACTCAAGCGCCTGATCCGCAGCGAGCTGGAAACTGCGCTGGCGCGCGAGATGCTCGGCGGCGGCA TCGGCAAGGGCGATCACGCCAGCGCACGCTGGGACGACAAGGCCGAACGCGTGGTGTTCGAACGCAAAGA GCCACCGCAGACCCCGGCCGAGCCGGAGCAGCCGGATGCCGCGAAGGCGAGCGACGCATCTTGATGGCGG GCGAGGCTGCCGTGTCCGACCCCATCGGCCTGGCACTGGCATGGGCAGCCTCCCTGGCCTCGATCGCGGT GGCGGTCGTGGCCGCAGGTCACGCGGGCGTCTACAAGCGTGATGAGCAGTCGGCCACGCCGTGGGGACTG CTCATCAGCGGCGGCACTGCCCTCCCGCTCGCTGGCCATCCGTTCGCGTGACGGCGCGGCCCATCTGTTC ACCTGATCCTCTGGCAACTCGACTTTCGAGGAACAAGGCCCATGGCTGGGTGACGCGGGCAGGCAACTGA TAGTCGGTACTCTGTTCGACATCTCTTCTCGCAAGGAAATAGAGCAGCAGTTGCTGCGTATGGTGATCAC CGACCCCTTTGCTTCACGGTTGAGGGAACATGTTCGCGCAACCGACATGGCTGCCCGGATTGGGGGGAGG AATTCGCTGTGTTGTTGGAAGCGGCATCGATAGAAGGCGCCCAAGTATGGGCGGAGCGATTTCGTCAGGA CACTGCGGCGACAGCGGTGGTGTGTGGAGAGGTGTCGATCAGCTATAGCGCCAGCATGGGGGGGGCTCTC CTTGACCCCCGTTTGCACTCTGTCGAGCAGGTGATGCTGCAGGCGGACAGCGCGCTCTACCAGGCAAAAA AGACAAGGGTGCAACCAAGTTGTGGGCGCACAAGTATTTCAGAATTGAGAGGAGTGGCGATGAAGGAAAA GCAAGCAGACCCGATCAAAACATTTCGCGCCCAATGGGCAGTGATGACGTTCTACGAGCGCTTTGAACAG GTGATCGCGCTCGCGCTGTCCGCAATCATTGCCGTTATCATCGTGGTCTCGCTGCTGCAGCTGATCTCGA TCGTCTTCAGCCTGCTGATCATTGATGCATTCAATCCGCTCGATCACAAGGTCTTCCAGACCGTGTTCGG CATGATCATGACGCTGCTCATTGCCATGGAGTTCAAGCATTCCATCGTGAGGGTGGCCTTGCGGCGCGAC AGCATCATCCAGGTCAAGACGGTGATCCTGATCGGGCTGATCGCCCTGGCGCGTAAATTCGTGATCCTCG ACCCGGAGACCGGCCCCGCCAAGGTCGCGGCGCTTGCAGGCGCGACACTGGCCCTCGGGGCGACTTACTG GCTGCTGCGCGAGCGCGATGACCGGACAGCCGGGGAAAGCTCAGATGATCAGTCGTGATCTGCGCCACGC GCAGAATGTCGGCGCGCGGCATCGCTGGCACAATCGCCTGCAAACCGTGCTGTTGGTGCTGACCCTGCTC GGAATTGCCGCCGTCGCTGGCAGCCTGCTGTTGGGTGACGGCGGGCTTTGGCTGGCGCTTGCGGCTGCGG GGTTCACCCTGCTGCTTGAACCGGCGGCCGCCTCCGGGCTGACCTTGCGGCTGTATGGCGCACGCCCCCT GCACCCGGATGAAGCGCCCGATCTTTGGGCTGTGTTGCGCGAACTGGCGGCGCGGGCCGGGCTGCCTACC GTGCCGGTACCGCACTACGTGCCCAGCGGGGTCGTCAACGCCTTCGCCACCGGTTCGAAGCATCACGCGG CCATCGCGCTGACCGACGGCCTGCTGCGTAGCCTCACGCCCCGCGAGTTGACCGGCGTGCTCGGCCACGA AATCGCGCATATTGCGAACGAGGATTTGCGTGTCATGGGCTTGGCCGATTCCATCAGCCGGCTCACCCAT CTTCTGGCCTTGTTGGGGCAGCTTGCGATCGTGCTCAGTTTGCCAACGCTATTGCTTGGAGTCACGGAAG TCAATTGGCCCGCGTTGCTTCTACTTGCGGTCGCGCCACAGCTGGCCTTGCTGGCTCAGTTGGGCTTGTC CAGGGTGCGCGAATTCGACGCCGACCGGCTCGCTGCCGAATTGACCGGCGACCCGCACGGGCTGGCCTCA GCGCTCGCCAAGATCGAGCGGGTGAGCCGCTCCTGGCGCGCCTGGCTGCTGCCCGGATGGGGCAATCCGG AACCCTCCTGGTTGCGCACGCATCCAGCGACGGCTGAACGCATTGAGCGCTTGCTAGAACTAGCTCCGCC GCCCGCGATGCCGCCGTTTCCATCGGCCCGTTTCGACCCCGAAGTGACCGTATCACCACGTCCGCCACGC TGGCGCACTGGCGGCCTTTGGCGCTGATTTCAACATGGAGAATGACGTGACCTACCCGACCCCTACAGCC GCCCGGAGCCGGATCGATTCATCCGGCGCTGGCTCGTCATCACTGGCTGCATCGCCGCACTCATGCTGCT GTGGCAGTTCCTGCCCGCCATCGAAGCCTGGTTCAGTCCCCACGAAACAAATGCTTCAGCCCGGAAGAGA GGTCTCAGGCCGTCCGGGAGCTCTGTAACCGACGTGGAACCGCGCGTAAAGTTGCACAAAGCATAGGCGT CAGCGTCCCGGTCCTGTACAAATGGAAGAAAGACCTTATCAGTGACGAGGCTTATCAATCCATGCGCAAA CGAAAGTCAGCCCCTCAGGATAAAAATCAGGATGCTTTACTCGGTGAAATCCAGCGTCTCAGGAAGCAGG TTCATCAGCTGCAGCTCGAACGTGACATACTGACAAAGGCGAATGAACTGATAAAAAAAGATCTGGGCGT CAGCTTTCTGAAACTGAAAAACAGGGAGAAAACCCTGATAGTTGATGCCCTTAAGAAAAAGTACCCCGTT GCTGAGTTGCTAAGCGTTCTGCAACTTGCCCGCAGCTGTTATTTTTACCAAAACGTCTGTACGATAAGTA TGCGGAAATACGCGTGATCATGGCCGATATCTTTGAGGAGAATTACCGCTGTTACGACTATCGGCGCCTT CACGCGATGCTTCGCGGTAACAACAGGGTTATTTCTGAAAAGGTTGTCCGCAGACTGATGGCAGAAGAGC AGCTCGTTGTTAAGCGCACCAGGCGACGACGATACAACTCTTACTGTGGCGAAATCGGCCCGGCACCGGA AAATTTACTCGCCCGGGATTTTAGTTCCTGCAGGCCAAATGAGAAGTGGCTGACCGATATTACGGAGTTC CAGCTTCCGGCTGGAAAAGTCTATCTGTCGCCGGTTATCGACTGCTTTGATGGCCTGGTTGTAAGCTGGT CGATAGGAACACGCCCGGACGCGACGCTGGTGAATACGATGCTCGATGACGCACTCGATACGCTCAACGA ACATGATAAACCAGTGATACACAGCGATCGTGGTGGCCATTACCGGTGGCCGGGCTGGCTCGAGCGTATC AACACCTCCGGACTTATAAGGTCCATGTCGCGCAAAGGATGCTCGTCGGATAATGCTGCGTGTGAAGGCT TCTTCGGGCGTATCAAAAACGAAATGTTCTATGGCAGAGACTGGGCGGGTATCACGCTGGAAAAATTTAT CTGCTTCCTGGACAGGTACATACGCTGGTATAACGAGAAACGTATCAAGCTATCATTAGGTGCAATGAGT CCTGTGAAGTACCGGCAGCATCTTGGGATCACAACATAA
Region Details
| Region | 1 |
| Region Length | 8.9Kb |
| Completeness(score) | incomplete(60) |
| Specific Keyword | transposase,protease |
| Region Position | 352-9350 |
| # tRNA | 0 |
| # Total Proteins | 12 |
| # Phage Hit Proteins | 6 |
| # Hypothetical Proteins | 2 |
| Phage + Hypothetical Protein % | 66.6% |
| # Bacterial Proteins | 4 |
| Attachment Site | no |
| # Phage Species | 6 |
| Most Common Phage Name(hit genes count) | PHAGE_Entero_P1_NC_005856(2) PHAGE_Prochl_P_SSM3_NC_021559(1) PHAGE_Bacter_Diva_NC_028788(1) PHAGE_Klebsi_K64_1_NC_027399(1) PHAGE_Entero_vB_KleM_RaK2_NC_019526(1) PHAGE_Escher_4_NC_027364(1) PHAGE_Paenib_Xenia_NC_028837(1) PHAGE_Shigel_SfIV_NC_022749(1) PHAGE_Prochl_P_SSM4_NC_006884(1) PHAGE_Bacill_SPP1_NC_004166(1) PHAGE_Synech_S_WAM1_NC_031944(1) PHAGE_Cyanop_P_RSM1_NC_021071(1) PHAGE_Escher_121Q_NC_025447(1) PHAGE_Prochl_P_RSM4_NC_015283(1) |
| First Most Common Phage # | 1 |
| First Most Common Phage % | 16.66% |
| GC % | 60.23% |
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| # tRNA: | The number of tRNA genes present in the region. |
| # Total Proteins: | The number of ORFs present in the region. |
| # Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
| # Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
| Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
| # Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
| Attachment Site: | The putative phage attachment site. |
| # Phage Species: | The number of different phages that have similar proteins to those in the region. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
| First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
| GC %: | The percentage of GC nucleotides of the region. |
Region DNA
>2 49241-52469 TTAATCCAACTCTCCACCTTCTGCCTGCTTCAACAATGTCGGAATGTGCGGTCCATACTCGACCTTGCCT CGTCCTGCTCGAATACCACTGCCAACCTTGCGGGCTTCTTTGGAGTACAACGTCTTTGCACGGATGATCT CATAGCTATAACCCCGACCTAACCGGTTGGACATCTTGATCAAACCGTTGAGCCCTTCGGTATAGCCATT GGTGAGTGAGAACGGCGCATCCCAGTAGGCAAAGATGTCGTCGTAATGGTTGTGTACCGTTTTTACCAGT TTTTTGAAAGGCTCCATGCCATAAGGCGGCAGGCTGTTCTTCCAAGCCTCAAAGGCGTTCTGAGCACTCT GCTTGTCGGGTTCGTCGTAGATGCAGAAGAAGGCTTCCTTGAAGTCATAGGCCATGGCAAGTGCTGGGAT CGCCTGCTTTACAACCTCCAGCGCCTTTTGCTCTGCGGGCGTCAGGTTGCCGGGTCGCTTCAGGGTAAGC CAGCGAATGGACTTTTTGACGTAAATGCGATCTTCTTTGCTTAACTGTGCCTGGGTAATGACCCCAACTT ACTGATAGTGTTTTATGTTCAGATAATGCCCGATGACCTTGTCATGCAGCTCCACCGATTTTGAGAACGA CAGTGACTTCCGTCCCAGCCTTGCCAGATGTTGTCGCAGATTCAGGTTATGTCGCTCAATGCGCTGAGTG TAACGCTTGCTGTTAACGTGCAGCTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCC ATACCACGACCTCAAAGGCCGACAGCAGGCTCAGAAGACGCTCCAGTGTGGCCAGAGTGCGTTCACCGAA GACGTGCGCCACAACCGTCCTCCGTATCCTGTCATACGCGTAAAACAGCCAGCGCTGACGTGATTTAGCA CCGACGTAGCCCCACTGTTCGTCCATTTCAGCGCAGACAATCACATCACTGCCCGGTTGTATGCGCGAGG TTACCGACTGCGGCCTGAGTTTTTTAAGTGACGTAAAACCGTGTTGAGGCCAACGCCCATAATGATGTAG CCCCCTGAAACACCGGACAGTAGCTGTATCTCCAGATAAGAGATAGGCTTGAATATATGTCTAACACTAA CGCCAATTTTGAGATGACCGGGATCCTGTTAGGGCAAGAAGCCCGTAAACGTAAAACTCCTCAGGAGAAG ATCGCCATTATCCAGCAGACGATGGAGCCGGGCATGAATGTCTCCCATGTCGCCCGCCTGCATGGTATCC AGCCCAGCCTGCTGTTTAAGTGGAAGAAGCAATATCAGGAAGGCAGCCTCACCGCCGTTGCGGCCGGAGA GGAAGTCGTTCCTGCTTCTGAGCTTACTGCTGCTCTGAAGCAGGTCCGGGAACTTCAGCGCCTTCTGGGC AAGAAGACGATGGAAGTTGAGATCCTGAAAGAAGCCGTGGAGTACGGCCAGTCGCGAAAATGGATAGCGC ACGCGCCCTTGTTGCCAAAGGACGGGGAATAGCCCTGGTCAGCCGCACCATGGGCGTGTCGCGTGCGCAG CTGTCACTGCGGATTAACCGTTCTGCCGACTGGCAGGACAAGCGCTGTAACCGGCGTAATGACGAAGCAG ACGAAGAAATACTGTCGGCTATCCTCGACATCATCAGCGATATGCCGAGTTATGGTTATCGACGCGTGTG GGGCATCCTGCGCAAGCAACGTCGCACAGAGGGACAGCCACCTGTGAACGCCAAACGGCTCTACAGGATA ATGAGCGAGCATAACCTGTTGTTGTTGCATGACAAACCAGAGCGACCGAAGCGTGAACATAAGGGCAAGA TAGCGGTGGCAGAAAGCGATATGCGCTGGTGTTCAGATGGCTTCGAGTTCGGCTGCGACAACGGCGAAAA ACTGCGGGTAACGTTCGCGCTGGACTGCTGCGACCGTGAGGCCATAGACTGGGCAGCAAGCACGGGAGGC TATGACAGTTCAACCGTGCAGGATGTGATGCTGAGGTCGGTGGAAAAGCGCTTCGGCGACAGGTTGCCCG ATACAGCGGTGCAGTGGCTGACGGACAACGGTTCAGCGTATACCGCGTATGAAACGTGGAGGTTCGCGAG AGAGCTGAATCTGGAGCCCTGCACAACAGCGGTGAGCAGCCCGCAGAGTAATGGCATGGCCGAACGGTTC GTGAAAACGATGAAAGAAGACTATATCGCGTTCATGCCAAAACCGGATGTGAGAACAGCACTGCGAAACC TTGCAGTAGCGTTCACGCATTACAATGAAAACCACCCGCACAGCGCGCTGGGATATCACTCCCCGAGGGA ATACCGGCGGCAGCGGACATCGTTAACTTAAGATACAAAAGCTGTTCGGAGATGGAGGGTCAAGATCACT AGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTA GACCAGTCATTGGAGAACAGATGATTGGTAATGCTGCCAACTTACTGATTTAGTGTATGATGGTGATTTT AAGGTGCTTGCGTGGCTTCCATTTCCATCAGATGTCCTTCCTGCTCCGCTACTGAAGGCGTGGTGCGTAA CGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCATTGCCGTAAAACATGGCAACTACAGTTC ACTTACACCGCCTCTCAGCCCGGTACGCACCAGAAAATCATTGATATGGCCATGAATGGCGTCGGATGTC GCGCCAGTGCACGCATTATGGGCGTTGGCCTCAACACGGTTTTACGTCACTTAAAAAACTCAGGCCGCAG TCGGTAACCTCGCGCATACAACCGGGCAGTGATGTGATTGTCTGCGCTGAAATGGACGAACAGTGGGGCT ACGTCGGTGCTAAATCACGTCAGCGCTGGCTGTTTTACGCGTATGACAGGATACGGAGGACGGTTGTGGC GCACGTCTTCGGTGAACGCACTCTGGCCACACTGGAGCGTCTTCTGAGCCTGCTGTCGGCCTTTGAGGTC GTGGTATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTTATCAGCA AGCGTTACACTCAGCGCATTGAGCGACATAACCTGAATCTGCGACAACATCTGGCAAGGCTGGGACGGAA GTCACTGTCGTTCTCAAAATCGGTGGAGCTGTATGACAAGGTCATCGGGCATTATCTGAACATAAAACAC TATCAGTAA
Region Details
| Region | 2 |
| Region Length | 3.2Kb |
| Completeness(score) | incomplete(60) |
| Specific Keyword | transposase |
| Region Position | 49241-52469 |
| # tRNA | 0 |
| # Total Proteins | 6 |
| # Phage Hit Proteins | 6 |
| # Hypothetical Proteins | 0 |
| Phage + Hypothetical Protein % | 100% |
| # Bacterial Proteins | 0 |
| Attachment Site | no |
| # Phage Species | 4 |
| Most Common Phage Name(hit genes count) | PHAGE_Entero_P1_NC_005856(2) PHAGE_Shigel_SfIV_NC_022749(1) PHAGE_Ralsto_RSA1_NC_009382(1) PHAGE_Pseudo_MD8_NC_031091(1) PHAGE_Burkho_Bcep22_NC_005262(1) PHAGE_Clostr_phiCD211_NC_029048(1) |
| First Most Common Phage # | 2 |
| First Most Common Phage % | 33.33% |
| GC % | 53.08% |
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| # tRNA: | The number of tRNA genes present in the region. |
| # Total Proteins: | The number of ORFs present in the region. |
| # Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
| # Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
| Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
| # Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
| Attachment Site: | The putative phage attachment site. |
| # Phage Species: | The number of different phages that have similar proteins to those in the region. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
| First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
| GC %: | The percentage of GC nucleotides of the region. |
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Questionable (score 70-90)
Incomplete (score < 70)
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Score: | The score of the region based on the above criteria. |
| # Total Proteins: | The number of ORFs present in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| GC %: | The percentage of GC nucleotides of the region. |
Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
- If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
- If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
- If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
- If the size of the region is greater than 30 Kb, the score will be increased by 10.
- If there are at least 40 proteins in the region, the score will be increased by 10.
- If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
gi|00000000|ref|MUMQ01000088.1| Klebsiella pneumoniae subsp. pneumoniae strain KPN_KPC_HUG_12 60925, gc%: 51.56%
Download details as .txt file: detail.txt file_download
Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File
Hits against Bacterial Database or GenBank File
Region 1, total 12 CDS
| # | CDS Position | BLAST Hit | E-Value | Sequence |
|---|---|---|---|---|
| 1 | complement(352..855) | PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; B0X03_28765; phage(gi557307573) | 1.61e-114 | Showinfo_outline |
| 2 | complement(774..1049) | PHAGE_Entero_P1_NC_005856: InsA; B0X03_28770; phage(gi46401643) | 1.21e-59 | Showinfo_outline |
| 3 | complement(1234..1980) | transposase; B0X03_28775 | 0.0 | Showinfo_outline |
| 4 | 2080..2361 | PHAGE_Bacill_SPP1_NC_004166: hypothetical protein; B0X03_28780; phage(gi22855124) | 1.91e-06 | Showinfo_outline |
| 5 | 2396..2965 | PHAGE_Cyanop_P_RSM1_NC_021071: heat shock protein; B0X03_28785; phage(gi481019345) | 7.81e-08 | Showinfo_outline |
| 6 | 3080..5875 | PROPHAGE_Escher_EDL933: ATP-dependent Clp protease ATP-binding subunit; B0X03_28790; phage(gi15800640) | 1.10e-161 | Showinfo_outline |
| 7 | 5875..6072 | hypothetical protein; B0X03_28795 | 0.0 | Showinfo_outline |
| 8 | 6122..6238 | diguanylate cyclase; B0X03_28800 | 0.0 | Showinfo_outline |
| 9 | 6310..7059 | diguanylate cyclase; B0X03_28805 | 0.0 | Showinfo_outline |
| 10 | 7046..8008 | Zn-dependent protease; B0X03_28810 | 0.0 | Showinfo_outline |
| 11 | 8149..8628 | hypothetical protein; B0X03_28815 | 0.0 | Showinfo_outline |
| 12 | 8625..9350 | PROPHAGE_Ralsto_GMI1000: isrso11-transposase orfb protein; B0X03_28820; phage(gi17546155) | 2.74e-59 | Showinfo_outline |
Sequence
>complement(352..855)
KlebsiellapneumoniaesubsppneumoniaeMPGNRPHYGRWPQHDFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLSTLERLLGLLSAFEVVVWMTDGWPLYESRLKGELHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ
Sequence
>complement(774..1049)
KlebsiellapneumoniaesubsppneumoniaeMASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTILRHLKNSDRSR
Sequence
>complement(1234..1980)
KlebsiellapneumoniaesubsppneumoniaeMTAFKSQCTAFSRPIDAGQLLRQGAAGRSDQAMDSAWLVSLRVPQAPRSNTDPHVVAECPQPLARLHVPWRKLVWARPDDDFPEAAQANVRNCPVVAADRVPESGRNTSVAPDNVVQQYPSGQHTFPTPPPKAMAHQADFPCALSAVPTANLSRLRSFRSVLNPVPPSQTSPWATASMPTSTTNGFGCLPRKPRLSSQRSSRCLLKCSAWVRILKRAAAIMSLIQSARNNGHDPYAYLKDVLTRLPSL
Sequence
>2080..2361
KlebsiellapneumoniaesubsppneumoniaeMKAHLQVIFTLDELAAYLKVGKRTLYRLAAHGEIPAFKVGGTWRFPQSEIDQWINDQTRAAAKKEVMRKREQQKSSEQPVSPGRTARHSRQRA
Sequence
>2396..2965
KlebsiellapneumoniaesubsppneumoniaeMDIDFKKLAPWNWFKNEQQEQQTVSSLPVQRNDLPAASGPVSPILQLHREIDRLFDDAFRGFGFPALNMPQWPSDWSGMLKPALDIQETDKQYKIALEVPGVEEKDIQITLDNDVLMVRGEKRQEQEKKEGGFHRVERSYGSFQRALNLPDDANQDSIKASFKNGVLTVTIDKREVSAPKQGRSIPING
Sequence
>3080..5875
KlebsiellapneumoniaesubsppneumoniaeMARKQCQVCGQPATVRVEANLNGRHSTMLLCDDHYRQLVRQQKRTVSPLEALFGSRSGLFEDFLGSDFFRIGDDATPVAADTDDVVDASFGEPAAAGSGAPRRRGSGLASRISEQSEALLQEAAKHAAEFGRSEVDTEHLLLALADSDVVKTILGQFKIKVDDLKRQIESEAKRGDKPFEGEIGVSPRVKDALSRAFVASNELGHSYVGPEHFLIGLAEEGEGLAANLLRRYGLTPQALRQQVSKVVGKGAEDGRAETPTNTPELDKYSRDLTKMARDGKLDPVIGRAQEIETTIEVLARRKKNNPVLIGEPGVGKTAIVEGLAQRMVAGEVPETLRDKRLVELNINAMVAGAKYRGEFEERVQKVLKEVTEHQGELILFIDEVHTIVGAGQGGGEGGLDVANVFKPMMARGELNLIGATTLNEYQKYIEKDAALERRFQPVTVPEPTVAQAIMILRGLRDTFEAHHKVSISEDAIIAAAELSDRYITARFLPDKAIDLLDQAAARVKLSATARPVAVQELESELHQLRREQDYVAARKQYDQAAELGKRIEAKEAELKKLVEDWERERASGSAEVKAEHVAQIVSRLTGIPVNELTVEEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGSKPVATFLFLGPTGVGKTELAKALAESIYGDEHALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSDIIQRRLKARGAAGEEYEKTKAGVMDVLRGHFRPEFLNRIDEIIVFHALGKEEIRHIVGLQLDRVARSAASQGVTLTFDQTLIDHFAEEGYKPEFGARELKRLIRSELETALAREMLGGGIGKGDHASARWDDKAERVVFERKEPPQTPAEPEQPDAAKASDAS
Sequence
>5875..6072
KlebsiellapneumoniaesubsppneumoniaeMAGEAAVSDPIGLALAWAASLASIAVAVVAAGHAGVYKRDEQSATPWGLLISGGTALPLAGHPFA
Sequence
>6122..6238
KlebsiellapneumoniaesubsppneumoniaeEQGPWLGDAGRQLIVGTLFDISSRKEIEQQLLRMVITDP
Sequence
>6310..7059
KlebsiellapneumoniaesubsppneumoniaeMLLEAASIEGAQVWAERFRQDTAATAVVCGEVSISYSASMGGALLDPRLHSVEQVMLQADSALYQAKKTRVQPSCGRTSISELRGVAMKEKQADPIKTFRAQWAVMTFYERFEQVIALALSAIIAVIIVVSLLQLISIVFSLLIIDAFNPLDHKVFQTVFGMIMTLLIAMEFKHSIVRVALRRDSIIQVKTVILIGLIALARKFVILDPETGPAKVAALAGATLALGATYWLLRERDDRTAGESSDDQS
Sequence
>7046..8008
KlebsiellapneumoniaesubsppneumoniaeMISRDLRHAQNVGARHRWHNRLQTVLLVLTLLGIAAVAGSLLLGDGGLWLALAAAGFTLLLEPAAASGLTLRLYGARPLHPDEAPDLWAVLRELAARAGLPTVPVPHYVPSGVVNAFATGSKHHAAIALTDGLLRSLTPRELTGVLGHEIAHIANEDLRVMGLADSISRLTHLLALLGQLAIVLSLPTLLLGVTEVNWPALLLLAVAPQLALLAQLGLSRVREFDADRLAAELTGDPHGLASALAKIERVSRSWRAWLLPGWGNPEPSWLRTHPATAERIERLLELAPPPAMPPFPSARFDPEVTVSPRPPRWRTGGLWR
Sequence
>8149..8628
KlebsiellapneumoniaesubsppneumoniaeMVQSPRNKCFSPEERSQAVRELCNRRGTARKVAQSIGVSVPVLYKWKKDLISDEAYQSMRKRKSAPQDKNQDALLGEIQRLRKQVHQLQLERDILTKANELIKKDLGVSFLKLKNREKTLIVDALKKKYPVAELLSVLQLARSCYFYQNVCTISMRKYA
Sequence
>8625..9350
KlebsiellapneumoniaesubsppneumoniaeMIMADIFEENYRCYDYRRLHAMLRGNNRVISEKVVRRLMAEEQLVVKRTRRRRYNSYCGEIGPAPENLLARDFSSCRPNEKWLTDITEFQLPAGKVYLSPVIDCFDGLVVSWSIGTRPDATLVNTMLDDALDTLNEHDKPVIHSDRGGHYRWPGWLERINTSGLIRSMSRKGCSSDNAACEGFFGRIKNEMFYGRDWAGITLEKFICFLDRYIRWYNEKRIKLSLGAMSPVKYRQHLGITT
Region 2, total 6 CDS
| # | CDS Position | BLAST Hit | E-Value | Sequence |
|---|---|---|---|---|
| 1 | complement(49241..49789) | PHAGE_Ralsto_RSA1_NC_009382: transposase IRSO15-like; B0X03_29045; phage(gi145708108) | 2.15e-05 | Showinfo_outline |
| 2 | complement(49799..50344) | PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; B0X03_29050; phage(gi557307573) | 1.99e-109 | Showinfo_outline |
| 3 | 50347..50742 | PROPHAGE_Escher_CFT073: transposase insC; B0X03_29055; phage(gi26251004) | 4.17e-56 | Showinfo_outline |
| 4 | 50745..51581 | PROPHAGE_Escher_CFT073: insertion element IS2 transposase InsD; B0X03_29060; phage(gi26249446) | 1.36e-120 | Showinfo_outline |
| 5 | 51772..52047 | PHAGE_Entero_P1_NC_005856: InsA; B0X03_29065; phage(gi46401643) | 6.23e-60 | Showinfo_outline |
| 6 | 51966..52469 | PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; B0X03_29070; phage(gi557307573) | 1.43e-110 | Showinfo_outline |
Sequence
>complement(49241..49789)
KlebsiellapneumoniaesubsppneumoniaeMTQAQLSKEDRIYVKKSIRWLTLKRPGNLTPAEQKALEVVKQAIPALAMAYDFKEAFFCIYDEPDKQSAQNAFEAWKNSLPPYGMEPFKKLVKTVHNHYDDIFAYWDAPFSLTNGYTEGLNGLIKMSNRLGRGYSYEIIRAKTLYSKEARKVGSGIRAGRGKVEYGPHIPTLLKQAEGGELD
Sequence
>complement(49799..50344)
KlebsiellapneumoniaesubsppneumoniaeMQAYLLSGDTATVRCFRGLHHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVNSKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ
Sequence
>50347..50742
KlebsiellapneumoniaesubsppneumoniaeMSNTNANFEMTGILLGQEARKRKTPQEKIAIIQQTMEPGMNVSHVARLHGIQPSLLFKWKKQYQEGSLTAVAAGEEVVPASELTAALKQVRELQRLLGKKTMEVEILKEAVEYGQSRKWIAHAPLLPKDGE
Sequence
>50745..51581
KlebsiellapneumoniaesubsppneumoniaeMVSRTMGVSRAQLSLRINRSADWQDKRCNRRNDEADEEILSAILDIISDMPSYGYRRVWGILRKQRRTEGQPPVNAKRLYRIMSEHNLLLLHDKPERPKREHKGKIAVAESDMRWCSDGFEFGCDNGEKLRVTFALDCCDREAIDWAASTGGYDSSTVQDVMLRSVEKRFGDRLPDTAVQWLTDNGSAYTAYETWRFARELNLEPCTTAVSSPQSNGMAERFVKTMKEDYIAFMPKPDVRTALRNLAVAFTHYNENHPHSALGYHSPREYRRQRTSLT
Sequence
>51772..52047
KlebsiellapneumoniaesubsppneumoniaeMASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR
Sequence
>51966..52469
KlebsiellapneumoniaesubsppneumoniaeMSRQCTHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELYDKVIGHYLNIKHYQ
Klebsiella pneumoniae subsp
Click on a region to see details.
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
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Questionable (score 70-90)
Incomplete (score < 70)
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Length: 60925 bps
Phages: 2
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Click on a region in the genome above to show details here.
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Click on a sequence to see details.
Locus 1: B0X03_28765 (Region 1)
Locus: B0X03_28765ORF Start: 352
ORF Stop: 855
Strand: Backward
Protein Sequence: MPGNRPHYGRWPQHDFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLSTLERLLGLLSAFEVVVWMTDGWPLYESRLKGELHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: B0X03_28765, IS1 transposase B, phage(gi557307573), PHAGE_Shigel_SfIV_NC_022749
Homolog/Ortholog E-Value: 1.61e-114
Locus 2: B0X03_28770 (Region 1)
Locus: B0X03_28770ORF Start: 774
ORF Stop: 1049
Strand: Backward
Protein Sequence: MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTILRHLKNSDRSR
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: B0X03_28770, InsA, phage(gi46401643), PHAGE_Entero_P1_NC_005856
Homolog/Ortholog E-Value: 1.21e-59
Locus 3: B0X03_28775 (Region 1)
Locus: B0X03_28775ORF Start: 1234
ORF Stop: 1980
Strand: Backward
Protein Sequence: MTAFKSQCTAFSRPIDAGQLLRQGAAGRSDQAMDSAWLVSLRVPQAPRSNTDPHVVAECPQPLARLHVPWRKLVWARPDDDFPEAAQANVRNCPVVAADRVPESGRNTSVAPDNVVQQYPSGQHTFPTPPPKAMAHQADFPCALSAVPTANLSRLRSFRSVLNPVPPSQTSPWATASMPTSTTNGFGCLPRKPRLSSQRSSRCLLKCSAWVRILKRAAAIMSLIQSARNNGHDPYAYLKDVLTRLPSL
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: B0X03_28775, transposase
Homolog/Ortholog E-Value: N/A
Locus 4: B0X03_28780 (Region 1)
Locus: B0X03_28780ORF Start: 2080
ORF Stop: 2361
Strand: Forward
Protein Sequence: MKAHLQVIFTLDELAAYLKVGKRTLYRLAAHGEIPAFKVGGTWRFPQSEIDQWINDQTRAAAKKEVMRKREQQKSSEQPVSPGRTARHSRQRA
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: B0X03_28780, hypothetical protein, phage(gi22855124), PHAGE_Bacill_SPP1_NC_004166
Homolog/Ortholog E-Value: 1.91e-06
Locus 5: B0X03_28785 (Region 1)
Locus: B0X03_28785ORF Start: 2396
ORF Stop: 2965
Strand: Forward
Protein Sequence: MDIDFKKLAPWNWFKNEQQEQQTVSSLPVQRNDLPAASGPVSPILQLHREIDRLFDDAFRGFGFPALNMPQWPSDWSGMLKPALDIQETDKQYKIALEVPGVEEKDIQITLDNDVLMVRGEKRQEQEKKEGGFHRVERSYGSFQRALNLPDDANQDSIKASFKNGVLTVTIDKREVSAPKQGRSIPING
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: B0X03_28785, heat shock protein, phage(gi481019345), PHAGE_Cyanop_P_RSM1_NC_021071
Homolog/Ortholog E-Value: 7.81e-08
Locus 6: B0X03_28790 (Region 1)
Locus: B0X03_28790ORF Start: 3080
ORF Stop: 5875
Strand: Forward
Protein Sequence: MARKQCQVCGQPATVRVEANLNGRHSTMLLCDDHYRQLVRQQKRTVSPLEALFGSRSGLFEDFLGSDFFRIGDDATPVAADTDDVVDASFGEPAAAGSGAPRRRGSGLASRISEQSEALLQEAAKHAAEFGRSEVDTEHLLLALADSDVVKTILGQFKIKVDDLKRQIESEAKRGDKPFEGEIGVSPRVKDALSRAFVASNELGHSYVGPEHFLIGLAEEGEGLAANLLRRYGLTPQALRQQVSKVVGKGAEDGRAETPTNTPELDKYSRDLTKMARDGKLDPVIGRAQEIETTIEVLARRKKNNPVLIGEPGVGKTAIVEGLAQRMVAGEVPETLRDKRLVELNINAMVAGAKYRGEFEERVQKVLKEVTEHQGELILFIDEVHTIVGAGQGGGEGGLDVANVFKPMMARGELNLIGATTLNEYQKYIEKDAALERRFQPVTVPEPTVAQAIMILRGLRDTFEAHHKVSISEDAIIAAAELSDRYITARFLPDKAIDLLDQAAARVKLSATARPVAVQELESELHQLRREQDYVAARKQYDQAAELGKRIEAKEAELKKLVEDWERERASGSAEVKAEHVAQIVSRLTGIPVNELTVEEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGSKPVATFLFLGPTGVGKTELAKALAESIYGDEHALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSDIIQRRLKARGAAGEEYEKTKAGVMDVLRGHFRPEFLNRIDEIIVFHALGKEEIRHIVGLQLDRVARSAASQGVTLTFDQTLIDHFAEEGYKPEFGARELKRLIRSELETALAREMLGGGIGKGDHASARWDDKAERVVFERKEPPQTPAEPEQPDAAKASDAS
Homolog/Ortholog Species: Protease
Homolog/Ortholog Protein: B0X03_28790, ATP-dependent Clp protease ATP-binding subunit, phage(gi15800640), PROPHAGE_Escher_EDL933
Homolog/Ortholog E-Value: 1.10e-161
Locus 7: B0X03_28795 (Region 1)
Locus: B0X03_28795ORF Start: 5875
ORF Stop: 6072
Strand: Forward
Protein Sequence: MAGEAAVSDPIGLALAWAASLASIAVAVVAAGHAGVYKRDEQSATPWGLLISGGTALPLAGHPFA
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: B0X03_28795, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 8: B0X03_28800 (Region 1)
Locus: B0X03_28800ORF Start: 6122
ORF Stop: 6238
Strand: Forward
Protein Sequence: EQGPWLGDAGRQLIVGTLFDISSRKEIEQQLLRMVITDP
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: B0X03_28800, diguanylate cyclase
Homolog/Ortholog E-Value: N/A
Locus 9: B0X03_28805 (Region 1)
Locus: B0X03_28805ORF Start: 6310
ORF Stop: 7059
Strand: Forward
Protein Sequence: MLLEAASIEGAQVWAERFRQDTAATAVVCGEVSISYSASMGGALLDPRLHSVEQVMLQADSALYQAKKTRVQPSCGRTSISELRGVAMKEKQADPIKTFRAQWAVMTFYERFEQVIALALSAIIAVIIVVSLLQLISIVFSLLIIDAFNPLDHKVFQTVFGMIMTLLIAMEFKHSIVRVALRRDSIIQVKTVILIGLIALARKFVILDPETGPAKVAALAGATLALGATYWLLRERDDRTAGESSDDQS
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: B0X03_28805, diguanylate cyclase
Homolog/Ortholog E-Value: N/A
Locus 10: B0X03_28810 (Region 1)
Locus: B0X03_28810ORF Start: 7046
ORF Stop: 8008
Strand: Forward
Protein Sequence: MISRDLRHAQNVGARHRWHNRLQTVLLVLTLLGIAAVAGSLLLGDGGLWLALAAAGFTLLLEPAAASGLTLRLYGARPLHPDEAPDLWAVLRELAARAGLPTVPVPHYVPSGVVNAFATGSKHHAAIALTDGLLRSLTPRELTGVLGHEIAHIANEDLRVMGLADSISRLTHLLALLGQLAIVLSLPTLLLGVTEVNWPALLLLAVAPQLALLAQLGLSRVREFDADRLAAELTGDPHGLASALAKIERVSRSWRAWLLPGWGNPEPSWLRTHPATAERIERLLELAPPPAMPPFPSARFDPEVTVSPRPPRWRTGGLWR
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: B0X03_28810, Zn-dependent protease
Homolog/Ortholog E-Value: N/A
Locus 11: B0X03_28815 (Region 1)
Locus: B0X03_28815ORF Start: 8149
ORF Stop: 8628
Strand: Forward
Protein Sequence: MVQSPRNKCFSPEERSQAVRELCNRRGTARKVAQSIGVSVPVLYKWKKDLISDEAYQSMRKRKSAPQDKNQDALLGEIQRLRKQVHQLQLERDILTKANELIKKDLGVSFLKLKNREKTLIVDALKKKYPVAELLSVLQLARSCYFYQNVCTISMRKYA
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: B0X03_28815, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 12: B0X03_28820 (Region 1)
Locus: B0X03_28820ORF Start: 8625
ORF Stop: 9350
Strand: Forward
Protein Sequence: MIMADIFEENYRCYDYRRLHAMLRGNNRVISEKVVRRLMAEEQLVVKRTRRRRYNSYCGEIGPAPENLLARDFSSCRPNEKWLTDITEFQLPAGKVYLSPVIDCFDGLVVSWSIGTRPDATLVNTMLDDALDTLNEHDKPVIHSDRGGHYRWPGWLERINTSGLIRSMSRKGCSSDNAACEGFFGRIKNEMFYGRDWAGITLEKFICFLDRYIRWYNEKRIKLSLGAMSPVKYRQHLGITT
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: B0X03_28820, isrso11-transposase orfb protein, phage(gi17546155), PROPHAGE_Ralsto_GMI1000
Homolog/Ortholog E-Value: 2.74e-59
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Locus 1: B0X03_29045 (Region 2)
Locus: B0X03_29045ORF Start: 49241
ORF Stop: 49789
Strand: Backward
Protein Sequence: MTQAQLSKEDRIYVKKSIRWLTLKRPGNLTPAEQKALEVVKQAIPALAMAYDFKEAFFCIYDEPDKQSAQNAFEAWKNSLPPYGMEPFKKLVKTVHNHYDDIFAYWDAPFSLTNGYTEGLNGLIKMSNRLGRGYSYEIIRAKTLYSKEARKVGSGIRAGRGKVEYGPHIPTLLKQAEGGELD
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: B0X03_29045, transposase IRSO15-like, phage(gi145708108), PHAGE_Ralsto_RSA1_NC_009382
Homolog/Ortholog E-Value: 2.15e-05
Locus 2: B0X03_29050 (Region 2)
Locus: B0X03_29050ORF Start: 49799
ORF Stop: 50344
Strand: Backward
Protein Sequence: MQAYLLSGDTATVRCFRGLHHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVNSKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: B0X03_29050, IS1 transposase B, phage(gi557307573), PHAGE_Shigel_SfIV_NC_022749
Homolog/Ortholog E-Value: 1.99e-109
Locus 3: B0X03_29055 (Region 2)
Locus: B0X03_29055ORF Start: 50347
ORF Stop: 50742
Strand: Forward
Protein Sequence: MSNTNANFEMTGILLGQEARKRKTPQEKIAIIQQTMEPGMNVSHVARLHGIQPSLLFKWKKQYQEGSLTAVAAGEEVVPASELTAALKQVRELQRLLGKKTMEVEILKEAVEYGQSRKWIAHAPLLPKDGE
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: B0X03_29055, transposase insC, phage(gi26251004), PROPHAGE_Escher_CFT073
Homolog/Ortholog E-Value: 4.17e-56
Locus 4: B0X03_29060 (Region 2)
Locus: B0X03_29060ORF Start: 50745
ORF Stop: 51581
Strand: Forward
Protein Sequence: MVSRTMGVSRAQLSLRINRSADWQDKRCNRRNDEADEEILSAILDIISDMPSYGYRRVWGILRKQRRTEGQPPVNAKRLYRIMSEHNLLLLHDKPERPKREHKGKIAVAESDMRWCSDGFEFGCDNGEKLRVTFALDCCDREAIDWAASTGGYDSSTVQDVMLRSVEKRFGDRLPDTAVQWLTDNGSAYTAYETWRFARELNLEPCTTAVSSPQSNGMAERFVKTMKEDYIAFMPKPDVRTALRNLAVAFTHYNENHPHSALGYHSPREYRRQRTSLT
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: B0X03_29060, insertion element IS2 transposase InsD, phage(gi26249446), PROPHAGE_Escher_CFT073
Homolog/Ortholog E-Value: 1.36e-120
Locus 5: B0X03_29065 (Region 2)
Locus: B0X03_29065ORF Start: 51772
ORF Stop: 52047
Strand: Forward
Protein Sequence: MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: B0X03_29065, InsA, phage(gi46401643), PHAGE_Entero_P1_NC_005856
Homolog/Ortholog E-Value: 6.23e-60
Locus 6: B0X03_29070 (Region 2)
Locus: B0X03_29070ORF Start: 51966
ORF Stop: 52469
Strand: Forward
Protein Sequence: MSRQCTHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELYDKVIGHYLNIKHYQ
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: B0X03_29070, IS1 transposase B, phage(gi557307573), PHAGE_Shigel_SfIV_NC_022749
Homolog/Ortholog E-Value: 1.43e-110
Lysis
Terminase
Portal Protein
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Other
Transposase
Fiber Protein
Plate Protein
tRNA
Plate Protein
tRNA
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