Submission Results
Sequence Name: Not Available
GenBank Accession Number: 1176963891 open_in_new
GenInfo (GI) Number: 0000000000 open_in_new
Download Results: 1176963891.PHASTER.zip
gi|00000000|ref|MUMT01000026.1| Klebsiella pneumoniae subsp. pneumoniae strain KPN_KPC_HUG_B2 60960, gc%: 51.56%
Download summary as .txt file: summary.txt file_download
Total: 2 prophage regions have been identified, of which 0 regions are intact, 1 regions are incomplete, and 1 regions are questionable.
| Region | Region Length | Completeness | Score | # Total Proteins | Region Position | Most Common Phage | GC % | Details |
|---|---|---|---|---|---|---|---|---|
| 1 | 9.3Kb | questionable | 70 | 13 | 1-9384 info_outline | PHAGE_Entero_P1_NC_005856(2) | 59.89% | Show info_outline |
| 2 | 3.2Kb | incomplete | 60 | 6 | 49275-52503 info_outline | PHAGE_Entero_P1_NC_005856(2) | 53.08% | Show info_outline |
Region DNA
>1 1-9384 GCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGAGAGGAAAATCTCTTTTCG GGTCTGACGGCGCTTAGTGCTGAATTCACTATCGGCGAAGGTGAGTTGATGGCTCATGATGTCCCTCTGG GATGCGCTCCGGATGAATATGATGATCTCATATCAGGAACTTGTTCGCACCTTCCCTAAGTCAATCACTT TAAAGACTGAAGTCTGGCGCAGTAGCCCCTGAAAGTTGAATATCCAATTCCAATGAGTAGGGGGCTGAGC CATCCGGTAAGGGCTGAATTTGCCTGCGGGATTGGCTCAGCCCGCCAGACCCGTTTGGTGTTGCGCCGGA CAATGTCCGGCGGCAAAGAAGGTAATGACTCCAACTTACTGATAGTGTTTTATGTTCAGATAATGCCCGA TGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGTGACTTCCTGCCCAGCCTTGCCAGATGCTG CCTCAGATTCAGGTTATGCCGCTCAATGCGCTGCGTATATCGCTTGCTGATAACGTGCAGTTCTCCCTTC AGGCGTGATTCATAAAGCGGCCAGCCATCCGTCATCCATACCACGACCTCAAAGGCCGACAGCAGGCCCA GAAGACGCTCCAGCGTGGACAACGTGCGTTCACCGAATACGTGCGCCACAACCGTCCTCCGTATCCTGTC ATACGCGTAAAACAACCAGCGCTGGCGTGATTTAGCACCGACGTAACCCCACTGTTCGTCCATTTCCGCG CAAACAATGACGTCACTGCCCGGTTGTATGCGTGAGGTTACCGACTGCGGTCTGAGTTTTTTAAGTGACG TAAAATCGTGTTGAGGCCAACGCCCATAATGCGGGCGGTTGCCCGGCATCCAACGCCATTCATGGCCATA TCAATGATTTTCTGGTGCGTACCGGGCTGAGAGGCGGTGTAAGTGAACTGTAGTTGCCATGTTTTACGGC AGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACGCCTTCAGTAGCGGA GCAGGAAGGACATCTGATGGAAATGGAAGCCACCCGCACAGCGCGCTGGGATATCACTCCCCGAGGGAAT ACCGGCAGCGGACATCGTTAACTTAAGATACAAAAGCTGTTCGGAGATGGAGGGTCAAGATCAGGGTGAC CTGCGCCATGATGTTATCCGAGCCCTGTTTCCTAATCACTACACCGGTATTTGATTACCCAGGTCAACTT CAGGCTGTTACAGGGACGGCAACCGTGTCAGCACATCCTTGAGATAGGCATACGGATCGTGCCCATTATT ACGGGCCGACTGGATCAAACTCATGATCGCAGCAGCGCGCTTGAGTATGCGAACCCACGCCGAGCATTTG AGAAGGCAACGGGATGAACGCTGGCTGGATAGCCGTGGTTTTCTGGGTAGGCAGCCGAATCCATTTGTGG TCGAGGTTGGCATTGAGGCTGTAGCCCAAGGCGATGTTTGCGATGGAGGCACCGGGTTCAGAACACTCCT GAATGACCTGAGCCTTGAAAGATTTGCTGTAGGTACGGCGCTGAGGGCGCATGGAAAATCCGCTTGATGG GCCATGGCCTTCGGCGGCGGTGTCGGGAAGGTGTGTTGGCCGGACGGATACTGTTGAACTACGTTGTCTG GGGCAACGGAAGTGTTTCGGCCCGACTCTGGAACGCGATCCGCAGCGACGACTGGGCAATTCCGCACGTT AGCCTGAGCAGCCTCGGGGAAATCGTCGTCTGGGCGCGCCCAGACGAGTTTCCGCCAAGGAACATGCAGA CGAGCAAGGGGCTGCGGGCACTCGGCTACAACGTGAGGATCGGTGTTTGATCGAGGCGCCTGTGGTACAC GCAGGCTGACGAGCCAGGCGCTGTCCATTGCCTGATCAGACCGCCCCGCTGCGCCTTGCCTGAGCAGTTG ACCTGCATCAATGGGGCGGGAGAACGCTGTACATTGACTCTTGAAGGCTGTCATGGTAAGCGTAATATCT TACAAAGTATTACAAGGATTTCCTTGGCCGGAACCGCAAAGCGACGCGATTGGAGAGGGTGAGATGAAAG CGCACCTACAGGGATGAAAGCGCACCTACAGGTGATTTTCACGCTCGATGAATTGGCTGCGTACTTGAAA GTCGGCAAGCGGACGCTTTATCGGCTCGCCGCGCACGGGGAAATTCCGGCTTTCAAGGTGGGCGGGACGT GGCGGTTTCCTCAAAGTGAAATCGATCAGTGGATCAATGATCAGACCCGAGCCGCAGCAAAGAAGGAGGT GATGCGCAAGCGTGAACAGCAGAAGTCATCCGAGCAGCCCGTGTCGCCTGGGCGCACTGCCCGTCACAGC AGGCAAAGGGCTTGAGTAACTCGTTTTCCAATTTTTCTGGAGGTATGACATGGACATCGATTTCAAGAAG TTGGCTCCCTGGAACTGGTTCAAGAACGAGCAGCAAGAGCAGCAGACCGTCTCTTCCCTGCCGGTGCAGC GCAATGACCTGCCAGCGGCGAGCGGGCCAGTCAGCCCGATCCTGCAACTGCATCGGGAAATCGACCGGCT GTTCGATGACGCATTCCGGGGCTTCGGTTTTCCGGCGTTGAACATGCCGCAGTGGCCATCCGATTGGTCG GGCATGCTGAAGCCGGCCCTGGACATCCAGGAAACCGACAAGCAGTACAAGATTGCCCTGGAAGTGCCCG GTGTCGAGGAGAAGGACATCCAGATCACTCTCGACAACGACGTGCTGATGGTGCGTGGCGAGAAGCGCCA GGAACAGGAGAAGAAGGAAGGTGGCTTCCACCGTGTGGAGCGCTCCTACGGCAGCTTTCAGCGTGCCTTG AACCTGCCTGACGACGCCAACCAGGATTCGATCAAAGCATCGTTCAAGAACGGGGTGCTCACGGTCACGA TCGACAAGCGCGAGGTCAGCGCGCCGAAGCAGGGACGCTCGATCCCGATCAACGGCTGACGTCGCCGGCT CGTTCGTCACAAGAAAAACCCGGCACGAGACGAGGAGTCGCGGTTCGCGATGCCTCGTCGCCTCAACCTT GTCAACCTTGTCAACCTTCTCAGGAGCATCAGCATGGCCAGAAAACAATGCCAGGTCTGCGGCCAACCCG CCACCGTGCGGGTGGAAGCCAATCTCAACGGTCGTCACAGCACCATGCTGTTGTGCGACGACCATTACCG GCAATTAGTGCGCCAGCAAAAGCGCACCGTTTCGCCGCTGGAAGCCTTGTTCGGCTCGCGCAGCGGCCTG TTCGAGGACTTCCTCGGCAGTGACTTCTTCCGCATCGGCGACGACGCGACGCCAGTTGCCGCCGATACCG ATGACGTGGTCGATGCCTCGTTTGGCGAGCCCGCCGCCGCAGGTTCGGGTGCGCCGCGCCGTCGCGGCAG TGGGCTGGCCAGCCGCATCAGCGAACAGTCGGAAGCCTTGCTGCAGGAGGCCGCCAAACACGCTGCCGAA TTTGGCCGCTCCGAGGTGGATACCGAACATCTGCTGCTGGCGCTGGCCGACAGCGACGTGGTCAAGACCA TCCTGGGTCAGTTCAAGATCAAGGTCGATGACCTCAAGCGGCAGATCGAGTCTGAGGCCAAGCGCGGGGA CAAGCCCTTCGAGGGCGAGATCGGCGTGTCGCCGCGCGTGAAGGATGCGCTCAGCCGCGCCTTCGTGGCC TCCAATGAACTCGGCCATTCTTATGTCGGTCCAGAGCATTTCCTGATCGGTCTGGCTGAGGAAGGCGAAG GGCTGGCCGCCAACCTGCTGCGCCGCTACGGCCTGACGCCGCAGGCGCTGCGCCAACAGGTCAGCAAGGT GGTCGGCAAGGGCGCCGAGGATGGCCGCGCTGAGACGCCGACCAACACGCCAGAACTCGACAAGTACTCG CGCGACCTGACCAAGATGGCGCGCGACGGCAAGCTCGACCCGGTGATCGGCCGCGCGCAGGAGATCGAAA CCACCATCGAGGTGCTGGCCCGGCGCAAGAAGAACAACCCGGTGCTGATCGGCGAGCCGGGTGTGGGCAA GACCGCCATCGTCGAAGGGCTGGCGCAGCGCATGGTGGCGGGTGAAGTGCCCGAGACCTTGCGCGACAAG CGCCTGGTGGAACTCAACATCAACGCCATGGTGGCCGGCGCCAAATATCGCGGCGAGTTCGAGGAGCGCG TGCAGAAGGTGCTGAAGGAGGTGACCGAGCACCAGGGCGAGCTGATTTTGTTCATCGACGAGGTGCACAC CATCGTCGGTGCCGGCCAGGGCGGTGGCGAAGGCGGGCTGGACGTGGCCAACGTGTTCAAACCGATGATG GCGCGCGGTGAACTCAACCTGATCGGCGCCACGACGCTGAACGAGTACCAGAAATACATCGAGAAGGATG CCGCACTGGAGCGGCGCTTCCAGCCGGTGACGGTACCCGAGCCGACGGTGGCCCAGGCCATCATGATTCT GCGCGGCCTGCGCGACACCTTCGAGGCGCACCACAAGGTCAGCATCTCCGAGGACGCGATCATCGCGGCG GCCGAGTTGTCCGACCGCTACATCACGGCGCGCTTCCTGCCGGACAAGGCGATCGACTTGCTCGACCAGG CGGCCGCGCGCGTGAAGCTGTCGGCCACGGCCCGGCCGGTGGCCGTGCAGGAGCTGGAGTCCGAACTGCA CCAGCTGCGGCGTGAACAGGATTACGTGGCCGCGCGCAAGCAGTACGACCAGGCCGCCGAGCTCGGGAAG CGCATCGAAGCCAAGGAGGCCGAGCTCAAGAAGCTCGTCGAGGACTGGGAGCGGGAGCGGGCCTCCGGCA GTGCCGAGGTCAAGGCGGAACACGTGGCGCAGATCGTCTCGCGCCTGACCGGCATCCCGGTCAACGAGTT GACGGTGGAAGAGCGCGAAAAGCTGCTGCACTTGGAACAACGGCTGCACGAGCGCCTGGTGGGACAAGAC GAGGCGGTCCGTGCCGTGGCCGATGCCGTGCGGCTGTCCCGCGCCGGCCTGCGTGAAGGCAGCAAACCGG TGGCTACCTTCCTGTTTCTGGGCCCGACCGGGGTGGGCAAGACCGAGCTCGCCAAGGCATTGGCCGAATC GATCTACGGCGATGAGCACGCCCTGTTGCGCATCGACATGTCGGAATATGGCGAACGCCATACCGTGGCG CGATTGGTGGGCGCGCCTCCGGGCTATGTCGGTTACGACGAAGGCGGTCAGCTCACCGAGAAGGTGCGGC GCAAGCCCTACAGCGTGCTGCTGCTCGACGAGATCGAGAAGGCACACCCTGACGTATACAACATCCTGCT GCAAGTGTTCGACGACGGTCGCCTCACCGACGGCAAGGGCCGGGTGGTGGATTTCACCAACACCATCATC ATCGCCACGTCCAACCTGGGTTCGGACATCATCCAGCGACGGCTGAAGGCGCGCGGGGCGGCCGGCGAGG AGTACGAAAAGACCAAGGCCGGAGTCATGGACGTGCTGCGCGGCCATTTCCGGCCCGAGTTCCTCAACCG CATCGACGAGATCATCGTCTTCCATGCGCTGGGCAAGGAGGAGATCCGCCACATCGTCGGCCTGCAGCTC GATCGCGTGGCGCGCAGCGCCGCCAGCCAGGGCGTGACGCTCACTTTCGATCAGACGCTGATCGACCATT TCGCGGAAGAAGGCTACAAGCCCGAGTTCGGTGCGCGTGAACTCAAGCGCCTGATCCGCAGCGAGCTGGA AACTGCGCTGGCGCGCGAGATGCTCGGCGGCGGCATCGGCAAGGGCGATCACGCCAGCGCACGCTGGGAC GACAAGGCCGAACGCGTGGTGTTCGAACGCAAAGAGCCACCGCAGACCCCGGCCGAGCCGGAGCAGCCGG ATGCCGCGAAGGCGAGCGACGCATCTTGATGGCGGGCGAGGCTGCCGTGTCCGACCCCATCGGCCTGGCA CTGGCATGGGCAGCCTCCCTGGCCTCGATCGCGGTGGCGGTCGTGGCCGCAGGTCACGCGGGCGTCTACA AGCGTGATGAGCAGTCGGCCACGCCGTGGGGACTGCTCATCAGCGGCGGCACTGCCCTCCCGCTCGCTGG CCATCCGTTCGCGTGACGGCGCGGCCCATCTGTTCACCTGATCCTCTGGCAACTCGACTTTCGAGGAACA AGGCCCATGGCTGGGTGACGCGGGCAGGCAACTGATAGTCGGTACTCTGTTCGACATCTCTTCTCGCAAG GAAATAGAGCAGCAGTTGCTGCGTATGGTGATCACCGACCCCTTTGCTTCACGGTTGAGGGAACATGTTC GCGCAACCGACATGGCTGCCCGGATTGGGGGGAGGAATTCGCTGTGTTGTTGGAAGCGGCATCGATAGAA GGCGCCCAAGTATGGGCGGAGCGATTTCGTCAGGACACTGCGGCGACAGCGGTGGTGTGTGGAGAGGTGT CGATCAGCTATAGCGCCAGCATGGGGGGGGCTCTCCTTGACCCCCGTTTGCACTCTGTCGAGCAGGTGAT GCTGCAGGCGGACAGCGCGCTCTACCAGGCAAAAAAGACAAGGGTGCAACCAAGTTGTGGGCGCACAAGT ATTTCAGAATTGAGAGGAGTGGCGATGAAGGAAAAGCAAGCAGACCCGATCAAAACATTTCGCGCCCAAT GGGCAGTGATGACGTTCTACGAGCGCTTTGAACAGGTGATCGCGCTCGCGCTGTCCGCAATCATTGCCGT TATCATCGTGGTCTCGCTGCTGCAGCTGATCTCGATCGTCTTCAGCCTGCTGATCATTGATGCATTCAAT CCGCTCGATCACAAGGTCTTCCAGACCGTGTTCGGCATGATCATGACGCTGCTCATTGCCATGGAGTTCA AGCATTCCATCGTGAGGGTGGCCTTGCGGCGCGACAGCATCATCCAGGTCAAGACGGTGATCCTGATCGG GCTGATCGCCCTGGCGCGTAAATTCGTGATCCTCGACCCGGAGACCGGCCCCGCCAAGGTCGCGGCGCTT GCAGGCGCGACACTGGCCCTCGGGGCGACTTACTGGCTGCTGCGCGAGCGCGATGACCGGACAGCCGGGG AAAGCTCAGATGATCAGTCGTGATCTGCGCCACGCGCAGAATGTCGGCGCGCGGCATCGCTGGCACAATC GCCTGCAAACCGTGCTGTTGGTGCTGACCCTGCTCGGAATTGCCGCCGTCGCTGGCAGCCTGCTGTTGGG TGACGGCGGGCTTTGGCTGGCGCTTGCGGCTGCGGGGTTCACCCTGCTGCTTGAACCGGCGGCCGCCTCC GGGCTGACCTTGCGGCTGTATGGCGCACGCCCCCTGCACCCGGATGAAGCGCCCGATCTTTGGGCTGTGT TGCGCGAACTGGCGGCGCGGGCCGGGCTGCCTACCGTGCCGGTACCGCACTACGTGCCCAGCGGGGTCGT CAACGCCTTCGCCACCGGTTCGAAGCATCACGCGGCCATCGCGCTGACCGACGGCCTGCTGCGTAGCCTC ACGCCCCGCGAGTTGACCGGCGTGCTCGGCCACGAAATCGCGCATATTGCGAACGAGGATTTGCGTGTCA TGGGCTTGGCCGATTCCATCAGCCGGCTCACCCATCTTCTGGCCTTGTTGGGGCAGCTTGCGATCGTGCT CAGTTTGCCAACGCTATTGCTTGGAGTCACGGAAGTCAATTGGCCCGCGTTGCTTCTACTTGCGGTCGCG CCACAGCTGGCCTTGCTGGCTCAGTTGGGCTTGTCCAGGGTGCGCGAATTCGACGCCGACCGGCTCGCTG CCGAATTGACCGGCGACCCGCACGGGCTGGCCTCAGCGCTCGCCAAGATCGAGCGGGTGAGCCGCTCCTG GCGCGCCTGGCTGCTGCCCGGATGGGGCAATCCGGAACCCTCCTGGTTGCGCACGCATCCAGCGACGGCT GAACGCATTGAGCGCTTGCTAGAACTAGCTCCGCCGCCCGCGATGCCGCCGTTTCCATCGGCCCGTTTCG ACCCCGAAGTGACCGTATCACCACGTCCGCCACGCTGGCGCACTGGCGGCCTTTGGCGCTGATTTCAACA TGGAGAATGACGTGACCTACCCGACCCCTACAGCCGCCCGGAGCCGGATCGATTCATCCGGCGCTGGCTC GTCATCACTGGCTGCATCGCCGCACTCATGCTGCTGTGGCAGTTCCTGCCCGCCATCGAAGCCTGGTTCA GTCCCCACGAAACAAATGCTTCAGCCCGGAAGAGAGGTCTCAGGCCGTCCGGGAGCTCTGTAACCGACGT GGAACCGCGCGTAAAGTTGCACAAAGCATAGGCGTCAGCGTCCCGGTCCTGTACAAATGGAAGAAAGACC TTATCAGTGACGAGGCTTATCAATCCATGCGCAAACGAAAGTCAGCCCCTCAGGATAAAAATCAGGATGC TTTACTCGGTGAAATCCAGCGTCTCAGGAAGCAGGTTCATCAGCTGCAGCTCGAACGTGACATACTGACA AAGGCGAATGAACTGATAAAAAAAGATCTGGGCGTCAGCTTTCTGAAACTGAAAAACAGGGAGAAAACCC TGATAGTTGATGCCCTTAAGAAAAAGTACCCCGTTGCTGAGTTGCTAAGCGTTCTGCAACTTGCCCGCAG CTGTTATTTTTACCAAAACGTCTGTACGATAAGTATGCGGAAATACGCGTGATCATGGCCGATATCTTTG AGGAGAATTACCGCTGTTACGACTATCGGCGCCTTCACGCGATGCTTCGCGGTAACAACAGGGTTATTTC TGAAAAGGTTGTCCGCAGACTGATGGCAGAAGAGCAGCTCGTTGTTAAGCGCACCAGGCGACGACGATAC AACTCTTACTGTGGCGAAATCGGCCCGGCACCGGAAAATTTACTCGCCCGGGATTTTAGTTCCTGCAGGC CAAATGAGAAGTGGCTGACCGATATTACGGAGTTCCAGCTTCCGGCTGGAAAAGTCTATCTGTCGCCGGT TATCGACTGCTTTGATGGCCTGGTTGTAAGCTGGTCGATAGGAACACGCCCGGACGCGACGCTGGTGAAT ACGATGCTCGATGACGCACTCGATACGCTCAACGAACATGATAAACCAGTGATACACAGCGATCGTGGTG GCCATTACCGGTGGCCGGGCTGGCTCGAGCGTATCAACACCTCCGGACTTATAAGGTCCATGTCGCGCAA AGGATGCTCGTCGGATAATGCTGCGTGTGAAGGCTTCTTCGGGCGTATCAAAAACGAAATGTTCTATGGC AGAGACTGGGCGGGTATCACGCTGGAAAAATTTATCTGCTTCCTGGACAGGTACATACGCTGGTATAACG AGAAACGTATCAAGCTATCATTAGGTGCAATGAGTCCTGTGAAGTACCGGCAGCATCTTGGGATCACAAC ATAA
Region Details
| Region | 1 |
| Region Length | 9.3Kb |
| Completeness(score) | questionable(70) |
| Specific Keyword | transposase,protease |
| Region Position | 1-9384 |
| # tRNA | 0 |
| # Total Proteins | 13 |
| # Phage Hit Proteins | 7 |
| # Hypothetical Proteins | 2 |
| Phage + Hypothetical Protein % | 69.2% |
| # Bacterial Proteins | 4 |
| Attachment Site | no |
| # Phage Species | 7 |
| Most Common Phage Name(hit genes count) | PHAGE_Entero_P1_NC_005856(2) PHAGE_Prochl_P_SSM3_NC_021559(1) PHAGE_Bacill_BMBtpLA_NC_028748(1) PHAGE_Bacter_Diva_NC_028788(1) PHAGE_Klebsi_K64_1_NC_027399(1) PHAGE_Entero_vB_KleM_RaK2_NC_019526(1) PHAGE_Escher_4_NC_027364(1) PHAGE_Paenib_Xenia_NC_028837(1) PHAGE_Shigel_SfIV_NC_022749(1) PHAGE_Prochl_P_SSM4_NC_006884(1) PHAGE_Synech_S_WAM1_NC_031944(1) PHAGE_Bacill_SPP1_NC_004166(1) PHAGE_Cyanop_P_RSM1_NC_021071(1) PHAGE_Escher_121Q_NC_025447(1) PHAGE_Prochl_P_RSM4_NC_015283(1) |
| First Most Common Phage # | 1 |
| First Most Common Phage % | 15.38% |
| GC % | 59.89% |
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| # tRNA: | The number of tRNA genes present in the region. |
| # Total Proteins: | The number of ORFs present in the region. |
| # Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
| # Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
| Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
| # Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
| Attachment Site: | The putative phage attachment site. |
| # Phage Species: | The number of different phages that have similar proteins to those in the region. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
| First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
| GC %: | The percentage of GC nucleotides of the region. |
Region DNA
>2 49275-52503 TTAATCCAACTCTCCACCTTCTGCCTGCTTCAACAATGTCGGAATGTGCGGTCCATACTCGACCTTGCCT CGTCCTGCTCGAATACCACTGCCAACCTTGCGGGCTTCTTTGGAGTACAACGTCTTTGCACGGATGATCT CATAGCTATAACCCCGACCTAACCGGTTGGACATCTTGATCAAACCGTTGAGCCCTTCGGTATAGCCATT GGTGAGTGAGAACGGCGCATCCCAGTAGGCAAAGATGTCGTCGTAATGGTTGTGTACCGTTTTTACCAGT TTTTTGAAAGGCTCCATGCCATAAGGCGGCAGGCTGTTCTTCCAAGCCTCAAAGGCGTTCTGAGCACTCT GCTTGTCGGGTTCGTCGTAGATGCAGAAGAAGGCTTCCTTGAAGTCATAGGCCATGGCAAGTGCTGGGAT CGCCTGCTTTACAACCTCCAGCGCCTTTTGCTCTGCGGGCGTCAGGTTGCCGGGTCGCTTCAGGGTAAGC CAGCGAATGGACTTTTTGACGTAAATGCGATCTTCTTTGCTTAACTGTGCCTGGGTAATGACCCCAACTT ACTGATAGTGTTTTATGTTCAGATAATGCCCGATGACCTTGTCATGCAGCTCCACCGATTTTGAGAACGA CAGTGACTTCCGTCCCAGCCTTGCCAGATGTTGTCGCAGATTCAGGTTATGTCGCTCAATGCGCTGAGTG TAACGCTTGCTGTTAACGTGCAGCTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCC ATACCACGACCTCAAAGGCCGACAGCAGGCTCAGAAGACGCTCCAGTGTGGCCAGAGTGCGTTCACCGAA GACGTGCGCCACAACCGTCCTCCGTATCCTGTCATACGCGTAAAACAGCCAGCGCTGACGTGATTTAGCA CCGACGTAGCCCCACTGTTCGTCCATTTCAGCGCAGACAATCACATCACTGCCCGGTTGTATGCGCGAGG TTACCGACTGCGGCCTGAGTTTTTTAAGTGACGTAAAACCGTGTTGAGGCCAACGCCCATAATGATGTAG CCCCCTGAAACACCGGACAGTAGCTGTATCTCCAGATAAGAGATAGGCTTGAATATATGTCTAACACTAA CGCCAATTTTGAGATGACCGGGATCCTGTTAGGGCAAGAAGCCCGTAAACGTAAAACTCCTCAGGAGAAG ATCGCCATTATCCAGCAGACGATGGAGCCGGGCATGAATGTCTCCCATGTCGCCCGCCTGCATGGTATCC AGCCCAGCCTGCTGTTTAAGTGGAAGAAGCAATATCAGGAAGGCAGCCTCACCGCCGTTGCGGCCGGAGA GGAAGTCGTTCCTGCTTCTGAGCTTACTGCTGCTCTGAAGCAGGTCCGGGAACTTCAGCGCCTTCTGGGC AAGAAGACGATGGAAGTTGAGATCCTGAAAGAAGCCGTGGAGTACGGCCAGTCGCGAAAATGGATAGCGC ACGCGCCCTTGTTGCCAAAGGACGGGGAATAGCCCTGGTCAGCCGCACCATGGGCGTGTCGCGTGCGCAG CTGTCACTGCGGATTAACCGTTCTGCCGACTGGCAGGACAAGCGCTGTAACCGGCGTAATGACGAAGCAG ACGAAGAAATACTGTCGGCTATCCTCGACATCATCAGCGATATGCCGAGTTATGGTTATCGACGCGTGTG GGGCATCCTGCGCAAGCAACGTCGCACAGAGGGACAGCCACCTGTGAACGCCAAACGGCTCTACAGGATA ATGAGCGAGCATAACCTGTTGTTGTTGCATGACAAACCAGAGCGACCGAAGCGTGAACATAAGGGCAAGA TAGCGGTGGCAGAAAGCGATATGCGCTGGTGTTCAGATGGCTTCGAGTTCGGCTGCGACAACGGCGAAAA ACTGCGGGTAACGTTCGCGCTGGACTGCTGCGACCGTGAGGCCATAGACTGGGCAGCAAGCACGGGAGGC TATGACAGTTCAACCGTGCAGGATGTGATGCTGAGGTCGGTGGAAAAGCGCTTCGGCGACAGGTTGCCCG ATACAGCGGTGCAGTGGCTGACGGACAACGGTTCAGCGTATACCGCGTATGAAACGTGGAGGTTCGCGAG AGAGCTGAATCTGGAGCCCTGCACAACAGCGGTGAGCAGCCCGCAGAGTAATGGCATGGCCGAACGGTTC GTGAAAACGATGAAAGAAGACTATATCGCGTTCATGCCAAAACCGGATGTGAGAACAGCACTGCGAAACC TTGCAGTAGCGTTCACGCATTACAATGAAAACCACCCGCACAGCGCGCTGGGATATCACTCCCCGAGGGA ATACCGGCGGCAGCGGACATCGTTAACTTAAGATACAAAAGCTGTTCGGAGATGGAGGGTCAAGATCACT AGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTA GACCAGTCATTGGAGAACAGATGATTGGTAATGCTGCCAACTTACTGATTTAGTGTATGATGGTGATTTT AAGGTGCTTGCGTGGCTTCCATTTCCATCAGATGTCCTTCCTGCTCCGCTACTGAAGGCGTGGTGCGTAA CGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCATTGCCGTAAAACATGGCAACTACAGTTC ACTTACACCGCCTCTCAGCCCGGTACGCACCAGAAAATCATTGATATGGCCATGAATGGCGTCGGATGTC GCGCCAGTGCACGCATTATGGGCGTTGGCCTCAACACGGTTTTACGTCACTTAAAAAACTCAGGCCGCAG TCGGTAACCTCGCGCATACAACCGGGCAGTGATGTGATTGTCTGCGCTGAAATGGACGAACAGTGGGGCT ACGTCGGTGCTAAATCACGTCAGCGCTGGCTGTTTTACGCGTATGACAGGATACGGAGGACGGTTGTGGC GCACGTCTTCGGTGAACGCACTCTGGCCACACTGGAGCGTCTTCTGAGCCTGCTGTCGGCCTTTGAGGTC GTGGTATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTTATCAGCA AGCGTTACACTCAGCGCATTGAGCGACATAACCTGAATCTGCGACAACATCTGGCAAGGCTGGGACGGAA GTCACTGTCGTTCTCAAAATCGGTGGAGCTGTATGACAAGGTCATCGGGCATTATCTGAACATAAAACAC TATCAGTAA
Region Details
| Region | 2 |
| Region Length | 3.2Kb |
| Completeness(score) | incomplete(60) |
| Specific Keyword | transposase |
| Region Position | 49275-52503 |
| # tRNA | 0 |
| # Total Proteins | 6 |
| # Phage Hit Proteins | 6 |
| # Hypothetical Proteins | 0 |
| Phage + Hypothetical Protein % | 100% |
| # Bacterial Proteins | 0 |
| Attachment Site | no |
| # Phage Species | 4 |
| Most Common Phage Name(hit genes count) | PHAGE_Entero_P1_NC_005856(2) PHAGE_Shigel_SfIV_NC_022749(1) PHAGE_Ralsto_RSA1_NC_009382(1) PHAGE_Pseudo_MD8_NC_031091(1) PHAGE_Burkho_Bcep22_NC_005262(1) PHAGE_Clostr_phiCD211_NC_029048(1) |
| First Most Common Phage # | 2 |
| First Most Common Phage % | 33.33% |
| GC % | 53.08% |
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| # tRNA: | The number of tRNA genes present in the region. |
| # Total Proteins: | The number of ORFs present in the region. |
| # Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
| # Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
| Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
| # Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
| Attachment Site: | The putative phage attachment site. |
| # Phage Species: | The number of different phages that have similar proteins to those in the region. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
| First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
| GC %: | The percentage of GC nucleotides of the region. |
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Questionable (score 70-90)
Incomplete (score < 70)
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Score: | The score of the region based on the above criteria. |
| # Total Proteins: | The number of ORFs present in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| GC %: | The percentage of GC nucleotides of the region. |
Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
- If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
- If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
- If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
- If the size of the region is greater than 30 Kb, the score will be increased by 10.
- If there are at least 40 proteins in the region, the score will be increased by 10.
- If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
gi|00000000|ref|MUMT01000026.1| Klebsiella pneumoniae subsp. pneumoniae strain KPN_KPC_HUG_B2 60960, gc%: 51.56%
Download details as .txt file: detail.txt file_download
Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File
Hits against Bacterial Database or GenBank File
Region 1, total 13 CDS
| # | CDS Position | BLAST Hit | E-Value | Sequence |
|---|---|---|---|---|
| 1 | complement(1..127) | PROPHAGE_Escher_MG1655: IS5 transposase and trans-activator; B0W93_26085; phage(gi16129935) | 5.76e-22 | Showinfo_outline |
| 2 | complement(386..889) | PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; B0W93_26090; phage(gi557307573) | 1.61e-114 | Showinfo_outline |
| 3 | complement(808..1083) | PHAGE_Entero_P1_NC_005856: InsA; B0W93_26095; phage(gi46401643) | 1.21e-59 | Showinfo_outline |
| 4 | complement(1268..2014) | transposase; B0W93_26100 | 0.0 | Showinfo_outline |
| 5 | 2114..2395 | PHAGE_Bacill_SPP1_NC_004166: hypothetical protein; B0W93_26105; phage(gi22855124) | 1.91e-06 | Showinfo_outline |
| 6 | 2430..2999 | PHAGE_Cyanop_P_RSM1_NC_021071: heat shock protein; B0W93_26110; phage(gi481019345) | 7.81e-08 | Showinfo_outline |
| 7 | 3114..5909 | PROPHAGE_Escher_EDL933: ATP-dependent Clp protease ATP-binding subunit; B0W93_26115; phage(gi15800640) | 1.10e-161 | Showinfo_outline |
| 8 | 5909..6106 | hypothetical protein; B0W93_26120 | 0.0 | Showinfo_outline |
| 9 | 6156..6272 | diguanylate cyclase; B0W93_26125 | 0.0 | Showinfo_outline |
| 10 | 6344..7093 | diguanylate cyclase; B0W93_26130 | 0.0 | Showinfo_outline |
| 11 | 7080..8042 | Zn-dependent protease; B0W93_26135 | 0.0 | Showinfo_outline |
| 12 | 8183..8662 | hypothetical protein; B0W93_26140 | 0.0 | Showinfo_outline |
| 13 | 8659..9384 | PROPHAGE_Ralsto_GMI1000: isrso11-transposase orfb protein; B0W93_26145; phage(gi17546155) | 2.74e-59 | Showinfo_outline |
Sequence
>complement(1..127)
KlebsiellapneumoniaesubsppneumoniaeMSHQLTFADSEFSTKRRQTRKEIFLSRMEQILPWQNMVEVIE
Sequence
>complement(386..889)
KlebsiellapneumoniaesubsppneumoniaeMPGNRPHYGRWPQHDFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLSTLERLLGLLSAFEVVVWMTDGWPLYESRLKGELHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ
Sequence
>complement(808..1083)
KlebsiellapneumoniaesubsppneumoniaeMASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTILRHLKNSDRSR
Sequence
>complement(1268..2014)
KlebsiellapneumoniaesubsppneumoniaeMTAFKSQCTAFSRPIDAGQLLRQGAAGRSDQAMDSAWLVSLRVPQAPRSNTDPHVVAECPQPLARLHVPWRKLVWARPDDDFPEAAQANVRNCPVVAADRVPESGRNTSVAPDNVVQQYPSGQHTFPTPPPKAMAHQADFPCALSAVPTANLSRLRSFRSVLNPVPPSQTSPWATASMPTSTTNGFGCLPRKPRLSSQRSSRCLLKCSAWVRILKRAAAIMSLIQSARNNGHDPYAYLKDVLTRLPSL
Sequence
>2114..2395
KlebsiellapneumoniaesubsppneumoniaeMKAHLQVIFTLDELAAYLKVGKRTLYRLAAHGEIPAFKVGGTWRFPQSEIDQWINDQTRAAAKKEVMRKREQQKSSEQPVSPGRTARHSRQRA
Sequence
>2430..2999
KlebsiellapneumoniaesubsppneumoniaeMDIDFKKLAPWNWFKNEQQEQQTVSSLPVQRNDLPAASGPVSPILQLHREIDRLFDDAFRGFGFPALNMPQWPSDWSGMLKPALDIQETDKQYKIALEVPGVEEKDIQITLDNDVLMVRGEKRQEQEKKEGGFHRVERSYGSFQRALNLPDDANQDSIKASFKNGVLTVTIDKREVSAPKQGRSIPING
Sequence
>3114..5909
KlebsiellapneumoniaesubsppneumoniaeMARKQCQVCGQPATVRVEANLNGRHSTMLLCDDHYRQLVRQQKRTVSPLEALFGSRSGLFEDFLGSDFFRIGDDATPVAADTDDVVDASFGEPAAAGSGAPRRRGSGLASRISEQSEALLQEAAKHAAEFGRSEVDTEHLLLALADSDVVKTILGQFKIKVDDLKRQIESEAKRGDKPFEGEIGVSPRVKDALSRAFVASNELGHSYVGPEHFLIGLAEEGEGLAANLLRRYGLTPQALRQQVSKVVGKGAEDGRAETPTNTPELDKYSRDLTKMARDGKLDPVIGRAQEIETTIEVLARRKKNNPVLIGEPGVGKTAIVEGLAQRMVAGEVPETLRDKRLVELNINAMVAGAKYRGEFEERVQKVLKEVTEHQGELILFIDEVHTIVGAGQGGGEGGLDVANVFKPMMARGELNLIGATTLNEYQKYIEKDAALERRFQPVTVPEPTVAQAIMILRGLRDTFEAHHKVSISEDAIIAAAELSDRYITARFLPDKAIDLLDQAAARVKLSATARPVAVQELESELHQLRREQDYVAARKQYDQAAELGKRIEAKEAELKKLVEDWERERASGSAEVKAEHVAQIVSRLTGIPVNELTVEEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGSKPVATFLFLGPTGVGKTELAKALAESIYGDEHALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSDIIQRRLKARGAAGEEYEKTKAGVMDVLRGHFRPEFLNRIDEIIVFHALGKEEIRHIVGLQLDRVARSAASQGVTLTFDQTLIDHFAEEGYKPEFGARELKRLIRSELETALAREMLGGGIGKGDHASARWDDKAERVVFERKEPPQTPAEPEQPDAAKASDAS
Sequence
>5909..6106
KlebsiellapneumoniaesubsppneumoniaeMAGEAAVSDPIGLALAWAASLASIAVAVVAAGHAGVYKRDEQSATPWGLLISGGTALPLAGHPFA
Sequence
>6156..6272
KlebsiellapneumoniaesubsppneumoniaeEQGPWLGDAGRQLIVGTLFDISSRKEIEQQLLRMVITDP
Sequence
>6344..7093
KlebsiellapneumoniaesubsppneumoniaeMLLEAASIEGAQVWAERFRQDTAATAVVCGEVSISYSASMGGALLDPRLHSVEQVMLQADSALYQAKKTRVQPSCGRTSISELRGVAMKEKQADPIKTFRAQWAVMTFYERFEQVIALALSAIIAVIIVVSLLQLISIVFSLLIIDAFNPLDHKVFQTVFGMIMTLLIAMEFKHSIVRVALRRDSIIQVKTVILIGLIALARKFVILDPETGPAKVAALAGATLALGATYWLLRERDDRTAGESSDDQS
Sequence
>7080..8042
KlebsiellapneumoniaesubsppneumoniaeMISRDLRHAQNVGARHRWHNRLQTVLLVLTLLGIAAVAGSLLLGDGGLWLALAAAGFTLLLEPAAASGLTLRLYGARPLHPDEAPDLWAVLRELAARAGLPTVPVPHYVPSGVVNAFATGSKHHAAIALTDGLLRSLTPRELTGVLGHEIAHIANEDLRVMGLADSISRLTHLLALLGQLAIVLSLPTLLLGVTEVNWPALLLLAVAPQLALLAQLGLSRVREFDADRLAAELTGDPHGLASALAKIERVSRSWRAWLLPGWGNPEPSWLRTHPATAERIERLLELAPPPAMPPFPSARFDPEVTVSPRPPRWRTGGLWR
Sequence
>8183..8662
KlebsiellapneumoniaesubsppneumoniaeMVQSPRNKCFSPEERSQAVRELCNRRGTARKVAQSIGVSVPVLYKWKKDLISDEAYQSMRKRKSAPQDKNQDALLGEIQRLRKQVHQLQLERDILTKANELIKKDLGVSFLKLKNREKTLIVDALKKKYPVAELLSVLQLARSCYFYQNVCTISMRKYA
Sequence
>8659..9384
KlebsiellapneumoniaesubsppneumoniaeMIMADIFEENYRCYDYRRLHAMLRGNNRVISEKVVRRLMAEEQLVVKRTRRRRYNSYCGEIGPAPENLLARDFSSCRPNEKWLTDITEFQLPAGKVYLSPVIDCFDGLVVSWSIGTRPDATLVNTMLDDALDTLNEHDKPVIHSDRGGHYRWPGWLERINTSGLIRSMSRKGCSSDNAACEGFFGRIKNEMFYGRDWAGITLEKFICFLDRYIRWYNEKRIKLSLGAMSPVKYRQHLGITT
Region 2, total 6 CDS
| # | CDS Position | BLAST Hit | E-Value | Sequence |
|---|---|---|---|---|
| 1 | complement(49275..49823) | PHAGE_Ralsto_RSA1_NC_009382: transposase IRSO15-like; B0W93_26370; phage(gi145708108) | 2.15e-05 | Showinfo_outline |
| 2 | complement(49833..50378) | PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; B0W93_26375; phage(gi557307573) | 1.99e-109 | Showinfo_outline |
| 3 | 50381..50776 | PROPHAGE_Escher_CFT073: transposase insC; B0W93_26380; phage(gi26251004) | 4.17e-56 | Showinfo_outline |
| 4 | 50779..51615 | PROPHAGE_Escher_CFT073: insertion element IS2 transposase InsD; B0W93_26385; phage(gi26249446) | 1.36e-120 | Showinfo_outline |
| 5 | 51806..52081 | PHAGE_Entero_P1_NC_005856: InsA; B0W93_26390; phage(gi46401643) | 6.23e-60 | Showinfo_outline |
| 6 | 52000..52503 | PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; B0W93_26395; phage(gi557307573) | 1.43e-110 | Showinfo_outline |
Sequence
>complement(49275..49823)
KlebsiellapneumoniaesubsppneumoniaeMTQAQLSKEDRIYVKKSIRWLTLKRPGNLTPAEQKALEVVKQAIPALAMAYDFKEAFFCIYDEPDKQSAQNAFEAWKNSLPPYGMEPFKKLVKTVHNHYDDIFAYWDAPFSLTNGYTEGLNGLIKMSNRLGRGYSYEIIRAKTLYSKEARKVGSGIRAGRGKVEYGPHIPTLLKQAEGGELD
Sequence
>complement(49833..50378)
KlebsiellapneumoniaesubsppneumoniaeMQAYLLSGDTATVRCFRGLHHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVNSKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ
Sequence
>50381..50776
KlebsiellapneumoniaesubsppneumoniaeMSNTNANFEMTGILLGQEARKRKTPQEKIAIIQQTMEPGMNVSHVARLHGIQPSLLFKWKKQYQEGSLTAVAAGEEVVPASELTAALKQVRELQRLLGKKTMEVEILKEAVEYGQSRKWIAHAPLLPKDGE
Sequence
>50779..51615
KlebsiellapneumoniaesubsppneumoniaeMVSRTMGVSRAQLSLRINRSADWQDKRCNRRNDEADEEILSAILDIISDMPSYGYRRVWGILRKQRRTEGQPPVNAKRLYRIMSEHNLLLLHDKPERPKREHKGKIAVAESDMRWCSDGFEFGCDNGEKLRVTFALDCCDREAIDWAASTGGYDSSTVQDVMLRSVEKRFGDRLPDTAVQWLTDNGSAYTAYETWRFARELNLEPCTTAVSSPQSNGMAERFVKTMKEDYIAFMPKPDVRTALRNLAVAFTHYNENHPHSALGYHSPREYRRQRTSLT
Sequence
>51806..52081
KlebsiellapneumoniaesubsppneumoniaeMASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR
Sequence
>52000..52503
KlebsiellapneumoniaesubsppneumoniaeMSRQCTHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELYDKVIGHYLNIKHYQ
Klebsiella pneumoniae subsp
Click on a region to see details.
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Questionable (score 70-90)
Incomplete (score < 70)
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Length: 60960 bps
Phages: 2
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Click on a region in the genome above to show details here.
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Click on a sequence to see details.
Locus 1: B0W93_26085 (Region 1)
Locus: B0W93_26085ORF Start: 1
ORF Stop: 127
Strand: Backward
Protein Sequence: MSHQLTFADSEFSTKRRQTRKEIFLSRMEQILPWQNMVEVIE
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: B0W93_26085, IS5 transposase and trans-activator, phage(gi16129935), PROPHAGE_Escher_MG1655
Homolog/Ortholog E-Value: 5.76e-22
Locus 2: B0W93_26090 (Region 1)
Locus: B0W93_26090ORF Start: 386
ORF Stop: 889
Strand: Backward
Protein Sequence: MPGNRPHYGRWPQHDFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLSTLERLLGLLSAFEVVVWMTDGWPLYESRLKGELHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: B0W93_26090, IS1 transposase B, phage(gi557307573), PHAGE_Shigel_SfIV_NC_022749
Homolog/Ortholog E-Value: 1.61e-114
Locus 3: B0W93_26095 (Region 1)
Locus: B0W93_26095ORF Start: 808
ORF Stop: 1083
Strand: Backward
Protein Sequence: MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTILRHLKNSDRSR
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: B0W93_26095, InsA, phage(gi46401643), PHAGE_Entero_P1_NC_005856
Homolog/Ortholog E-Value: 1.21e-59
Locus 4: B0W93_26100 (Region 1)
Locus: B0W93_26100ORF Start: 1268
ORF Stop: 2014
Strand: Backward
Protein Sequence: MTAFKSQCTAFSRPIDAGQLLRQGAAGRSDQAMDSAWLVSLRVPQAPRSNTDPHVVAECPQPLARLHVPWRKLVWARPDDDFPEAAQANVRNCPVVAADRVPESGRNTSVAPDNVVQQYPSGQHTFPTPPPKAMAHQADFPCALSAVPTANLSRLRSFRSVLNPVPPSQTSPWATASMPTSTTNGFGCLPRKPRLSSQRSSRCLLKCSAWVRILKRAAAIMSLIQSARNNGHDPYAYLKDVLTRLPSL
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: B0W93_26100, transposase
Homolog/Ortholog E-Value: N/A
Locus 5: B0W93_26105 (Region 1)
Locus: B0W93_26105ORF Start: 2114
ORF Stop: 2395
Strand: Forward
Protein Sequence: MKAHLQVIFTLDELAAYLKVGKRTLYRLAAHGEIPAFKVGGTWRFPQSEIDQWINDQTRAAAKKEVMRKREQQKSSEQPVSPGRTARHSRQRA
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: B0W93_26105, hypothetical protein, phage(gi22855124), PHAGE_Bacill_SPP1_NC_004166
Homolog/Ortholog E-Value: 1.91e-06
Locus 6: B0W93_26110 (Region 1)
Locus: B0W93_26110ORF Start: 2430
ORF Stop: 2999
Strand: Forward
Protein Sequence: MDIDFKKLAPWNWFKNEQQEQQTVSSLPVQRNDLPAASGPVSPILQLHREIDRLFDDAFRGFGFPALNMPQWPSDWSGMLKPALDIQETDKQYKIALEVPGVEEKDIQITLDNDVLMVRGEKRQEQEKKEGGFHRVERSYGSFQRALNLPDDANQDSIKASFKNGVLTVTIDKREVSAPKQGRSIPING
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: B0W93_26110, heat shock protein, phage(gi481019345), PHAGE_Cyanop_P_RSM1_NC_021071
Homolog/Ortholog E-Value: 7.81e-08
Locus 7: B0W93_26115 (Region 1)
Locus: B0W93_26115ORF Start: 3114
ORF Stop: 5909
Strand: Forward
Protein Sequence: MARKQCQVCGQPATVRVEANLNGRHSTMLLCDDHYRQLVRQQKRTVSPLEALFGSRSGLFEDFLGSDFFRIGDDATPVAADTDDVVDASFGEPAAAGSGAPRRRGSGLASRISEQSEALLQEAAKHAAEFGRSEVDTEHLLLALADSDVVKTILGQFKIKVDDLKRQIESEAKRGDKPFEGEIGVSPRVKDALSRAFVASNELGHSYVGPEHFLIGLAEEGEGLAANLLRRYGLTPQALRQQVSKVVGKGAEDGRAETPTNTPELDKYSRDLTKMARDGKLDPVIGRAQEIETTIEVLARRKKNNPVLIGEPGVGKTAIVEGLAQRMVAGEVPETLRDKRLVELNINAMVAGAKYRGEFEERVQKVLKEVTEHQGELILFIDEVHTIVGAGQGGGEGGLDVANVFKPMMARGELNLIGATTLNEYQKYIEKDAALERRFQPVTVPEPTVAQAIMILRGLRDTFEAHHKVSISEDAIIAAAELSDRYITARFLPDKAIDLLDQAAARVKLSATARPVAVQELESELHQLRREQDYVAARKQYDQAAELGKRIEAKEAELKKLVEDWERERASGSAEVKAEHVAQIVSRLTGIPVNELTVEEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGSKPVATFLFLGPTGVGKTELAKALAESIYGDEHALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSDIIQRRLKARGAAGEEYEKTKAGVMDVLRGHFRPEFLNRIDEIIVFHALGKEEIRHIVGLQLDRVARSAASQGVTLTFDQTLIDHFAEEGYKPEFGARELKRLIRSELETALAREMLGGGIGKGDHASARWDDKAERVVFERKEPPQTPAEPEQPDAAKASDAS
Homolog/Ortholog Species: Protease
Homolog/Ortholog Protein: B0W93_26115, ATP-dependent Clp protease ATP-binding subunit, phage(gi15800640), PROPHAGE_Escher_EDL933
Homolog/Ortholog E-Value: 1.10e-161
Locus 8: B0W93_26120 (Region 1)
Locus: B0W93_26120ORF Start: 5909
ORF Stop: 6106
Strand: Forward
Protein Sequence: MAGEAAVSDPIGLALAWAASLASIAVAVVAAGHAGVYKRDEQSATPWGLLISGGTALPLAGHPFA
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: B0W93_26120, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 9: B0W93_26125 (Region 1)
Locus: B0W93_26125ORF Start: 6156
ORF Stop: 6272
Strand: Forward
Protein Sequence: EQGPWLGDAGRQLIVGTLFDISSRKEIEQQLLRMVITDP
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: B0W93_26125, diguanylate cyclase
Homolog/Ortholog E-Value: N/A
Locus 10: B0W93_26130 (Region 1)
Locus: B0W93_26130ORF Start: 6344
ORF Stop: 7093
Strand: Forward
Protein Sequence: MLLEAASIEGAQVWAERFRQDTAATAVVCGEVSISYSASMGGALLDPRLHSVEQVMLQADSALYQAKKTRVQPSCGRTSISELRGVAMKEKQADPIKTFRAQWAVMTFYERFEQVIALALSAIIAVIIVVSLLQLISIVFSLLIIDAFNPLDHKVFQTVFGMIMTLLIAMEFKHSIVRVALRRDSIIQVKTVILIGLIALARKFVILDPETGPAKVAALAGATLALGATYWLLRERDDRTAGESSDDQS
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: B0W93_26130, diguanylate cyclase
Homolog/Ortholog E-Value: N/A
Locus 11: B0W93_26135 (Region 1)
Locus: B0W93_26135ORF Start: 7080
ORF Stop: 8042
Strand: Forward
Protein Sequence: MISRDLRHAQNVGARHRWHNRLQTVLLVLTLLGIAAVAGSLLLGDGGLWLALAAAGFTLLLEPAAASGLTLRLYGARPLHPDEAPDLWAVLRELAARAGLPTVPVPHYVPSGVVNAFATGSKHHAAIALTDGLLRSLTPRELTGVLGHEIAHIANEDLRVMGLADSISRLTHLLALLGQLAIVLSLPTLLLGVTEVNWPALLLLAVAPQLALLAQLGLSRVREFDADRLAAELTGDPHGLASALAKIERVSRSWRAWLLPGWGNPEPSWLRTHPATAERIERLLELAPPPAMPPFPSARFDPEVTVSPRPPRWRTGGLWR
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: B0W93_26135, Zn-dependent protease
Homolog/Ortholog E-Value: N/A
Locus 12: B0W93_26140 (Region 1)
Locus: B0W93_26140ORF Start: 8183
ORF Stop: 8662
Strand: Forward
Protein Sequence: MVQSPRNKCFSPEERSQAVRELCNRRGTARKVAQSIGVSVPVLYKWKKDLISDEAYQSMRKRKSAPQDKNQDALLGEIQRLRKQVHQLQLERDILTKANELIKKDLGVSFLKLKNREKTLIVDALKKKYPVAELLSVLQLARSCYFYQNVCTISMRKYA
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: B0W93_26140, hypothetical protein
Homolog/Ortholog E-Value: N/A
Locus 13: B0W93_26145 (Region 1)
Locus: B0W93_26145ORF Start: 8659
ORF Stop: 9384
Strand: Forward
Protein Sequence: MIMADIFEENYRCYDYRRLHAMLRGNNRVISEKVVRRLMAEEQLVVKRTRRRRYNSYCGEIGPAPENLLARDFSSCRPNEKWLTDITEFQLPAGKVYLSPVIDCFDGLVVSWSIGTRPDATLVNTMLDDALDTLNEHDKPVIHSDRGGHYRWPGWLERINTSGLIRSMSRKGCSSDNAACEGFFGRIKNEMFYGRDWAGITLEKFICFLDRYIRWYNEKRIKLSLGAMSPVKYRQHLGITT
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: B0W93_26145, isrso11-transposase orfb protein, phage(gi17546155), PROPHAGE_Ralsto_GMI1000
Homolog/Ortholog E-Value: 2.74e-59
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Click on a sequence to see details.
Locus 1: B0W93_26370 (Region 2)
Locus: B0W93_26370ORF Start: 49275
ORF Stop: 49823
Strand: Backward
Protein Sequence: MTQAQLSKEDRIYVKKSIRWLTLKRPGNLTPAEQKALEVVKQAIPALAMAYDFKEAFFCIYDEPDKQSAQNAFEAWKNSLPPYGMEPFKKLVKTVHNHYDDIFAYWDAPFSLTNGYTEGLNGLIKMSNRLGRGYSYEIIRAKTLYSKEARKVGSGIRAGRGKVEYGPHIPTLLKQAEGGELD
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: B0W93_26370, transposase IRSO15-like, phage(gi145708108), PHAGE_Ralsto_RSA1_NC_009382
Homolog/Ortholog E-Value: 2.15e-05
Locus 2: B0W93_26375 (Region 2)
Locus: B0W93_26375ORF Start: 49833
ORF Stop: 50378
Strand: Backward
Protein Sequence: MQAYLLSGDTATVRCFRGLHHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVNSKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: B0W93_26375, IS1 transposase B, phage(gi557307573), PHAGE_Shigel_SfIV_NC_022749
Homolog/Ortholog E-Value: 1.99e-109
Locus 3: B0W93_26380 (Region 2)
Locus: B0W93_26380ORF Start: 50381
ORF Stop: 50776
Strand: Forward
Protein Sequence: MSNTNANFEMTGILLGQEARKRKTPQEKIAIIQQTMEPGMNVSHVARLHGIQPSLLFKWKKQYQEGSLTAVAAGEEVVPASELTAALKQVRELQRLLGKKTMEVEILKEAVEYGQSRKWIAHAPLLPKDGE
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: B0W93_26380, transposase insC, phage(gi26251004), PROPHAGE_Escher_CFT073
Homolog/Ortholog E-Value: 4.17e-56
Locus 4: B0W93_26385 (Region 2)
Locus: B0W93_26385ORF Start: 50779
ORF Stop: 51615
Strand: Forward
Protein Sequence: MVSRTMGVSRAQLSLRINRSADWQDKRCNRRNDEADEEILSAILDIISDMPSYGYRRVWGILRKQRRTEGQPPVNAKRLYRIMSEHNLLLLHDKPERPKREHKGKIAVAESDMRWCSDGFEFGCDNGEKLRVTFALDCCDREAIDWAASTGGYDSSTVQDVMLRSVEKRFGDRLPDTAVQWLTDNGSAYTAYETWRFARELNLEPCTTAVSSPQSNGMAERFVKTMKEDYIAFMPKPDVRTALRNLAVAFTHYNENHPHSALGYHSPREYRRQRTSLT
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: B0W93_26385, insertion element IS2 transposase InsD, phage(gi26249446), PROPHAGE_Escher_CFT073
Homolog/Ortholog E-Value: 1.36e-120
Locus 5: B0W93_26390 (Region 2)
Locus: B0W93_26390ORF Start: 51806
ORF Stop: 52081
Strand: Forward
Protein Sequence: MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: B0W93_26390, InsA, phage(gi46401643), PHAGE_Entero_P1_NC_005856
Homolog/Ortholog E-Value: 6.23e-60
Locus 6: B0W93_26395 (Region 2)
Locus: B0W93_26395ORF Start: 52000
ORF Stop: 52503
Strand: Forward
Protein Sequence: MSRQCTHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELYDKVIGHYLNIKHYQ
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: B0W93_26395, IS1 transposase B, phage(gi557307573), PHAGE_Shigel_SfIV_NC_022749
Homolog/Ortholog E-Value: 1.43e-110
Lysis
Terminase
Portal Protein
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Other
Transposase
Fiber Protein
Plate Protein
tRNA
Plate Protein
tRNA
Download data as .txt file: png_input file_download