gi|00000000|ref|CP019049.1|  Klebsiella pneumoniae subsp. pneumoniae strain RJA166 plasmid 228613, gc%: 50.05%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
40742..40755                       attL                                                                                 N/A                 TTTGTTGAATAAAT
46267..46662                       PROPHAGE_Escher_MG1655: IS150 transposase B; RJA_28980; phage(gi16131429)            9.51e-28            [Klebsiellapneumoniaesubsp.pneumoniae]
complement(46658..47472)           PROPHAGE_Escher_CFT073: insertion element IS2 transposase InsD; RJA_28985; phage(gi26249446)     6.72e-99            [Klebsiellapneumoniaesubsp.pneumoniae]
complement(47520..47885)           PROPHAGE_Escher_CFT073: transposase insC; RJA_28990; phage(gi26249447)               3.99e-57            [Klebsiellapneumoniaesubsp.pneumoniae]
47845..48036                       nitrite extrusion protein 2; RJA_28995                                               N/A                 [Klebsiellapneumoniaesubsp.pneumoniae]
48255..48569                       hypothetical protein; RJA_29000                                                      N/A                 [Klebsiellapneumoniaesubsp.pneumoniae]
48578..49088                       hypothetical protein; RJA_29005                                                      N/A                 [Klebsiellapneumoniaesubsp.pneumoniae]
49078..49518                       hypothetical protein; RJA_29010                                                      N/A                 [Klebsiellapneumoniaesubsp.pneumoniae]
49548..50204                       hypothetical protein; RJA_29015                                                      N/A                 [Klebsiellapneumoniaesubsp.pneumoniae]
complement(50479..51081)           PHAGE_Cronob_S13_NC_028773: hypothetical protein; RJA_29020; phage(gi971741961)      5.97e-08            [Klebsiellapneumoniaesubsp.pneumoniae]
complement(51084..51599)           hypothetical protein; RJA_29025                                                      N/A                 [Klebsiellapneumoniaesubsp.pneumoniae]
complement(51707..52282)           hypothetical protein; RJA_29030                                                      N/A                 [Klebsiellapneumoniaesubsp.pneumoniae]
complement(52399..53355)           thioredoxin; RJA_29035                                                               N/A                 [Klebsiellapneumoniaesubsp.pneumoniae]
complement(53415..53756)           hypothetical protein; RJA_29040                                                      N/A                 [Klebsiellapneumoniaesubsp.pneumoniae]
complement(53770..54081)           hypothetical protein; RJA_29045                                                      N/A                 [Klebsiellapneumoniaesubsp.pneumoniae]
complement(54098..54532)           thiol:disulfide interchange protein; RJA_29050                                       N/A                 [Klebsiellapneumoniaesubsp.pneumoniae]
complement(54549..55052)           PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; RJA_29055; phage(gi557307573)        1.28e-118           [Klebsiellapneumoniaesubsp.pneumoniae]
complement(54971..55246)           PHAGE_Entero_P1_NC_005856: InsA; RJA_29060; phage(gi46401643)                        4.10e-62            [Klebsiellapneumoniaesubsp.pneumoniae]
55375..55818                       PROPHAGE_Escher_CFT073: insertion element IS2 transposase InsD; RJA_29065; phage(gi26249446)     7.98e-91            [Klebsiellapneumoniaesubsp.pneumoniae]
56023..56334                       PHAGE_Riemer_RAP44_NC_019490: DUF2136 superfamily protein; RJA_29070; phage(gi418489860)     1.08e-11            [Klebsiellapneumoniaesubsp.pneumoniae]
56331..56750                       PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; RJA_29075; phage(gi157166006)     5.98e-05            [Klebsiellapneumoniaesubsp.pneumoniae]
56868..56881                       attR                                                                                 N/A                 TTTGTTGAATAAAT
56897..57865                       PHAGE_Entero_HK022_NC_002166: IS903 transposase; RJA_29080; phage(gi9634149)         0.0                 [Klebsiellapneumoniaesubsp.pneumoniae]

#### region 2 ####
97077..97856                       PHAGE_Mycoba_Squirty_NC_026588: non-functional integrase; RJA_29270; phage(gi764159894)     5.77e-07            [Klebsiellapneumoniaesubsp.pneumoniae]
complement(98001..98930)           PROPHAGE_Escher_MG1655: predicted transposase; RJA_29275; phage(gi16131287)          1.29e-110           [Klebsiellapneumoniaesubsp.pneumoniae]
99243..99344                       transposase; RJA_29280                                                               N/A                 [Klebsiellapneumoniaesubsp.pneumoniae]
complement(99452..101128)          hypothetical protein; RJA_29285                                                      N/A                 [Klebsiellapneumoniaesubsp.pneumoniae]
101317..101562                     molecular chaperone DnaJ; RJA_29290                                                  N/A                 [Klebsiellapneumoniaesubsp.pneumoniae]
complement(101701..101829)         PROPHAGE_Escher_CFT073: transposase; RJA_29295; phage(gi26246249)                    7.76e-13            [Klebsiellapneumoniaesubsp.pneumoniae]
102086..102952                     PHAGE_Brevib_Sundance_NC_028749: putative cobyrinic acid ac-diamide synthase; RJA_29300; phage(gi971482557)     1.31e-06            [Klebsiellapneumoniaesubsp.pneumoniae]
102952..103983                     chromosome partitioning protein ParB; RJA_29305                                      N/A                 [Klebsiellapneumoniaesubsp.pneumoniae]
103983..104420                     hypothetical protein; RJA_29310                                                      N/A                 [Klebsiellapneumoniaesubsp.pneumoniae]
complement(104480..104695)         hypothetical protein; RJA_29315                                                      N/A                 [Klebsiellapneumoniaesubsp.pneumoniae]
104790..105980                     hypothetical protein; RJA_29320                                                      N/A                 [Klebsiellapneumoniaesubsp.pneumoniae]
106052..106315                     PROPHAGE_Xantho_33913: IS1404 transposase; RJA_29325; phage(gi21232568)              2.68e-30            [Klebsiellapneumoniaesubsp.pneumoniae]
106348..106713                     PROPHAGE_Xantho_33913: IS1477 transposase; RJA_29330; phage(gi77747809)              3.31e-28            [Klebsiellapneumoniaesubsp.pneumoniae]
complement(106767..107520)         PROPHAGE_Escher_CFT073: transposase/IS protein; RJA_29335; phage(gi26248359)         7.16e-38            [Klebsiellapneumoniaesubsp.pneumoniae]
complement(107520..107612)         PROPHAGE_Escher_CFT073: transposase; RJA_29340; phage(gi26248360)                    1.13e-08            [Klebsiellapneumoniaesubsp.pneumoniae]
complement(107603..108538)         PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; RJA_29345; phage(gi557307612)     2.47e-26            [Klebsiellapneumoniaesubsp.pneumoniae]
108595..108910                     hypothetical protein; RJA_29350                                                      N/A                 [Klebsiellapneumoniaesubsp.pneumoniae]
108961..109227                     PROPHAGE_Ralsto_GMI1000: isrso12-transposase orfa protein; RJA_29355; phage(gi17546157)     4.34e-43            [Klebsiellapneumoniaesubsp.pneumoniae]
109251..110050                     PROPHAGE_Ralsto_GMI1000: ISRSO12-transposase ORFB protein; RJA_29360; phage(gi17546158)     3.20e-12            [Klebsiellapneumoniaesubsp.pneumoniae]
110261..110797                     plasmid transfer protein; RJA_29365                                                  N/A                 [Klebsiellapneumoniaesubsp.pneumoniae]
complement(110934..111207)         transposase; RJA_29370                                                               N/A                 [Klebsiellapneumoniaesubsp.pneumoniae]
111655..112295                     integrase; RJA_29375                                                                 N/A                 [Klebsiellapneumoniaesubsp.pneumoniae]
