gi|00000000|ref|NZ_NJFE02000001.1|  Salmonella enterica subsp. enterica serovar Typhimurium var. 5- 68805, gc%: 50.65%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(35353..36180)           PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; CEP96_RS00230; phage(gi371496158)     2.41e-13            SalmonellaentericasubspentericaserovarTyphimuriumvar5MMQSAGIVVNDVTVTWRNGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKAIMGFVRLTSGKISVLGIPTRQALQKNLVAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGMLRIAKKRDRQIVTDALERVDMVDFRHRQIGELSGGQKKRVFLARAIAQQGDVILLDEPFTGVDVKTEAKIISLLRELRAEGKTMLVSTHNLGSVTTFCDYTVMVKGTVLASGPTDTTFTAENLELAFSGVLRHVTLNGSEESIITDDERPFVAHRPSAVQREER
complement(36180..37094)           iron/manganese ABC transporter substrate-binding protein SitA; CEP96_RS00235         N/A                 SalmonellaentericasubspentericaserovarTyphimuriumvar5MLSIKKVTMLLGCLVLTCSIAFQASAAEKFKVITTFTIIADMAKNVAGDAAEVSSITKPGAEIHEYQPTPGDIKRAQGAQLILANGMNLELWFQRFYQHLNGVPEVIVSSGVTPVGITEGPYEGKPNPHAWMSPDNALIYVDNIRDAFIKYDPINAQTYQRNADTYKAKITQTLAPLRKQIAELPENQRWMVTSEGAFSYLARDLGLKELYLWPINADQQGTPQQVRKVVDIVKKNHIPAVFSESTISDKPARQVARETGAHYGGVLYVDSLSTENGPVPTYIDLLKVTTSTLVQGIKAGKREK
37303..37315                       attL                                                                                 N/A                 TGGCAAAGCAAAA
37450..38136                       PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; CEP96_RS00250; phage(gi557307573)     2.03e-80            SalmonellaentericasubspentericaserovarTyphimuriumvar5VASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRVTARIMGVGLNTILRHLKNSGRSRPRAYSRAVTSSSARKWTNSGAMSRQRWLFYAYDSLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ
complement(38316..38829)           PHAGE_Cronob_ENT39118_NC_019934: DNA polymerase; CEP96_RS00255; phage(gi431811050)     1.14e-14            SalmonellaentericasubspentericaserovarTyphimuriumvar5SRSFGERITDKDAMHQAVVQYAERAAEKLRGERQYCRQVTTFVRTSPTLLQQCRCGKAFIAHTGQPGHYCRRMQSLKPCLARVPLYEGRSHAGFHTIGYSAAGIINPAPKQKVNENTRTEPVGKRESVVCGARNRPMANETGNVESVLYNMARYSPGQAGLG
complement(38890..38994)           PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; CEP96_RS00260; phage(gi557307613)     1.40e-16            SalmonellaentericasubspentericaserovarTyphimuriumvar5GESYRLKEKRKAGVLTKNTTPISDDEMVQSGQHQ
complement(38996..39319)           PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; CEP96_RS00265; phage(gi557307612)     2.65e-72            SalmonellaentericasubspentericaserovarTyphimuriumvar5MLSREDFYMIKQMRQQGAYIVDIAAQIGCSERTVRRYLKYPEPPARKTRHKMVKLKPFMDYIDMRLAENVWNSEVIFAEIKAMGYTGGRSMLRYYIQPKRKMRPSKRT
40062..41039                       PHAGE_Salmon_SSU5_NC_018843: putative replication protein RepA; CEP96_RS00275; phage(gi410491479)     6.44e-135           SalmonellaentericasubspentericaserovarTyphimuriumvar5MDKSSGELVTLTPNNNNTVQPVALMRLGVFVPTLKSLKNSKKNTLSRTDATEELTRLSLARAEGFDKVEITGPRLDMDNDFKTWVGIIHSFARHNVIGDKVELPFVEFAKLCGIPSSQSSRRLRERISPSLKRIAGTVISFSRTDEKHTREYITHLVQSAYYDTERDIVQLQADPRLFELYQFDRKVLLQLKAINALKRRESAQALYTFIESLPRDPAPISLARLRARLNLKSPVFSQNQTVRRAMEQLREIGYLDYTEIQRGRTKLFCIHYRRPRLKAPNDESKENPLPPSPAEKVSPEMAEKLALLEKLGITLDDLEKLFKSR
complement(41318..42058)           PHAGE_Brevib_Jenst_NC_028805: putative recombinase XerD; CEP96_RS00280; phage(gi971744895)     5.00e-05            SalmonellaentericasubspentericaserovarTyphimuriumvar5MNNVIPLQNSPERVSLLPIAPGVDFATALSLRRMATSTGATPAYLLAPEVSALLFYMPDQRHHMLFATLWNTGMRIGEARMLTPESFDLDGVRPFVRILSEKVRARRGRPPKDEVRLVPLTDISYVRQMESWMITTRPRRREPLWAVTDETMRNWLKQAVRRAEADGVHFSIPVTPHTFRHSYIMHMLYHRQPRKVIQALAGHRDPRSMEVYTRVFALDMAATLAVPFTGDGRDAAEILRTLPPLK
complement(42227..42931)           PROPHAGE_Brucel_1330: transposase, putative; CEP96_RS00290; phage(gi23502708)        1.86e-53            SalmonellaentericasubspentericaserovarTyphimuriumvar5MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIINATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
43209..44069                       PHAGE_Salmon_SJ46_NC_031129: capsid decoration protein; CEP96_RS00295; phage(gi100066)     8.35e-57            SalmonellaentericasubspentericaserovarTyphimuriumvar5MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGASLIKHW
54821..54833                       attR                                                                                 N/A                 TGGCAAAGCAAAA
