gi|00000000|ref|NZ_JARX01000017.1|  Salmonella enterica subsp. arizonae serovar 18:z4,z23:- str. CVM 155457, gc%: 52.75%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
14980..15555                       PHAGE_Rhizob_vB_RleM_P10VF_NC_025429: RNA polymerase sigma-70 factor; Z993_RS13860; phage(gi712913000)     1.36e-09            Salmonellaentericasubsparizonaeserovar18z4z23strCVM43478MSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPSGDVPDVVQESFIKAYRALDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDVIEAENFESGGALKEISNPENLMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRAREAIDNKVQPLIRR
15587..16237                       anti-sigma-E factor RseA; Z993_RS13865                                               N/A                 Salmonellaentericasubsparizonaeserovar18z4z23strCVM43478MQKEKLSALMDGETLDSELLNALTHDPEMQKTWESYHLIRDSMRGDTPDVLHFDISARVMAAIENDPVRQVSPLIPEAQPAPQQWQKMPFWKKVRPWAAQLTQVGVAACVSLAVIVGVQHYNGQSETSQQPETPVFNTLPMMGKASPVSLGVPSEAAPVGSQQQQVQEQRRRINAMLQDYELQRRLHSEQLQFEQAQTQQAAVQVPGIQTLGTQSQ
16237..17193                       sigma-E factor regulatory protein RseB; Z993_RS13870                                 N/A                 Salmonellaentericasubsparizonaeserovar18z4z23strCVM43478MKQLWFAMSLVAGSLFFSVNASADPASGALLQQMNIASQSLNYELSFVSITKQGVESLRYRHARLDSRPLAQLLQLDGPRREVVQRGNEISYFEPGLEPFTLNGDYIVDSLPSLIYTDFKRLAPYYDFISVGRTRIADRLCEVIRVVARDGTRYSYIVWMDMDTKLPMRVDLLDRDGETLEQFRVIAFTVSKDIGSTMQALAKANLPPLLSVPGGEKTKFNWSPSWVPQGFSEVSSSRRPLPTMDNLPIESRLYSDGLFSFSVNVNRATPNSSDQMLRTGRRTVYSSVRDNAEITIVGELPPQTAKRIADSIKFRAVQ
17190..17669                       SoxR-reducing system protein RseC; Z993_RS13875                                      N/A                 Salmonellaentericasubsparizonaeserovar18z4z23strCVM43478MIKEWATVVSWQNGQAVVSCDVKASCSSCASRAGCGSRVLNKLGPQTSHTIVVPSAEPLAPGQKVELGIAEKSLLGSALLVYMSPLAGLFFCAALFQVLFGSDLAALSGAVLGGMGGFLVARGYSRKLSERDAWQPVILNVALPPGLVRVETTSIEMRQ
complement(17831..18037)           PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; Z993_RS13885; phage(gi169257270)     1.27e-18            Salmonellaentericasubsparizonaeserovar18z4z23strCVM43478MKLINRSKQSPVDRRACDVALAARHESFDDYGRQKHVTHYIVVEQTLEVAVLSLTSVLTETPHSTLQR
18103..18621                       PHAGE_Salmon_SEN34_NC_028699: tail fiber protein; Z993_RS13890; phage(gi966201444)     6.16e-78            Salmonellaentericasubsparizonaeserovar18z4z23strCVM43478MLSGNTGASDSTTATTTTAVNYVLNQALAAYSLVASRYTADGATTANAGLVKLVNSMGAGSLVMTQAAVTNAIQTYPSLGKGQKIQDLRASRSAEVTYTSSTGFPIAVYVRISGGYSTVLYTHVNGIEFGDGGSTASNTSIAMAFFIVPNGATYLVEATGASPALQSWTELI
18736..18969                       PHAGE_Salmon_SEN34_NC_028699: putative tail assembly chaperone; Z993_RS13895; phage(gi966201445)     2.06e-30            Salmonellaentericasubsparizonaeserovar18z4z23strCVM43478MEIINPPPMHEDLIQAAENKRQRLLSRADWRTDLMLGETSDANRNKRSAWLANKNEVKLVDITTTPDNIIWPAPPEG
19176..19394                       hypothetical protein; Z993_RS13900                                                   N/A                 Salmonellaentericasubsparizonaeserovar18z4z23strCVM43478MKYVKNIFLVLTFALSAAAFSTSAMAASDTKAPPKANDIPHKPLPGMSKFCQDLLEGGGPIPPAMYQYCWQN
complement(19515..20092)           PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; Z993_RS23115; phage(gi169257321)     3.35e-59            Salmonellaentericasubsparizonaeserovar18z4z23strCVM43478MVFKMSEQATVKVFNLRSDINEFIGAGEAYIPPHTGLPANCTDIAPSDIPASHIAVFDAETQTWNPKEDHRGETVYDITTGNQVYISEPGPLPENITSVSPEENTRNRMVRRGRLKQRKMRPGFARLKRPTAAFCKWHKEKLRRFRIRLILELQQRMREYSSTNGNIGFWTVWIQQTQTGRKKLTIIYAA
complement(20092..20595)           PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; Z993_RS13910; phage(gi169257320)     4.03e-99            Salmonellaentericasubsparizonaeserovar18z4z23strCVM43478YAPIQGQAFDKSAYPLLAIAYPSGVIPDMRGGTIKGKPASGRAVLSQEMDGNKSHSHSASAQDANLGTKGTSSFDYGTKSTNTTGNYTHQFGDYINSYWGDSNHTSFQPGNGTWTQAAGDHAHTVYIRAHDHTVYIAPDGHVVIVDADGNAETTVKNIAFNYIVRLA
20763..22757                       PHAGE_Phage_Gifsy_2_NC_010393: prophage virulence determinant; secreted effector protein; Z993_RS13915; phage(gi169257322)     1.97e-79            Salmonellaentericasubsparizonaeserovar18z4z23strCVM43478MPFYVGSGCRPATISNHRIYLIARFDTPPEMSSWEKSKAFFCSTHQTEALECIRTICHPPAGTTREDVVSRFGQLRTLAYAGCEENIHSGLHGENHYCILDEDNQEILSVTLDDAGNYTVNCQGYSETHHLTMATEPGEERTEHAEGTSCLPATTAPQTAAEYYAVWSAWQRAAPEGEARGRAAAVKKMRDCLKNGNPVLCVERAGLTTLPDHLPPHITILFIPDNNLTSLPALPSGLRELSVSYNQLTSLPPLPSGLWKLSVFNNQLASLPALPSGLQTLWAYRNQLPSLPALPPGLRDLSVSHNQLASLPESITGLSSEATVDLAGNPLSERTLQTLRDITSAPDYSGPRIRFDMAGPSVPREARALHLAVADWLTPEREGEPDPADSWHASGQEDNAAAFSLFLDRLRETENFEKDAGFKAQISSWLALLAEDDVLRAKTFAMATEATSSCQDRVTLALHQMKNVQLVHNAEKGVYDNNLPGLVSTGREMFRMEMLERIAREKARTLAFVDEIEVYLAYQNKLKKPLGLTSVTAKMRFFGVSGVTASDLRSAERQVKAAEKREFSEWILQWGPLHSVLERKEPERFNALREKQISDYEDTYQMLSDTELKPFGLVGNTDAERTIGVRAMESAKKEFLNGLRPFVEEMLGSYLKVKARRRLN
22930..23255                       PHAGE_Salmon_vB_SosS_Oslo_NC_018279: error-prone lesion bypass DNA polymerase V; Z993_RS23120; phage(gi399528790)     3.05e-18            Salmonellaentericasubsparizonaeserovar18z4z23strCVM43478DDAPCADSEKLMEVLDQLNAKDGKGRLYFAGPGIQQQWEMKREKLSPDIPPAMKTCFRLSARFNICTLIFHISDSTGYRNHVVCKNMLWAACCLYQDLPCLVYAG
