gi|00000000|ref|NZ_JARX01000018.1|  Salmonella enterica subsp. arizonae serovar 18:z4,z23:- str. CVM 277688, gc%: 50.62%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
254889..254904                     attL                                                                                 N/A                 CAGTCAGAGGAGCCAA
complement(257704..258387)         PROPHAGE_Escher_CFT073: prophage P4 integrase; Z993_RS15720; phage(gi26248270)       8.01e-58            Salmonellaentericasubsparizonaeserovar18z4z23strCVM43478MVRFWSAPQRSLNDPKIRNLKPSFKPVKLSDSHGLYLLANPGGSRIWYLKYRFNGKEPRVSLDAYPLVSLAGARQQRDGVHKLLAQNINPAQQRMADKAAASPEKCFKAVALAWHKTNKKWSSDSATRILASMKNHIFPAIAHLPVTTLKTQYFTALLRVIESKGFLEVASRTRQQLCNIMCYAVQQGLTENNPALHLEGVTAPPVKNHYPALPLERLPELLERIGD
complement(258522..258597)         tRNA                                                                                 N/A                 TCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA
258881..258983                     LysR family transcriptional regulator; Z993_RS22980                                  N/A                 Salmonellaentericasubsparizonaeserovar18z4z23strCVM43478MNFRRLKYFVKIVDTGCGSVTYHAARSQSAGSYSG
259085..259158                     tRNA                                                                                 N/A                 CCGCCATTAGCTCATCGGGAATAGCGACGACCTGGAAGTTGTAGTATAGGGTTCGAGTTCTCGATGGCGGTCCA
complement(259472..260968)         C69 family dipeptidase; Z993_RS15730                                                 N/A                 Salmonellaentericasubsparizonaeserovar18z4z23strCVM43478MFSFKKCVLALSINLAFISSGFSCTTLLVGNEASSDGSMIAARSADSDAMKAQHFVIHPAMHNQTGMYSTKAHNGANDFTWPLPKESLRYTTVPNWKTQLHGATGFNEAGVGVSGTESIFASPKALAFDPYVEDKGITEDDIPDILLSQTKTAREAIALLGHIIETVGAGEGFGVAVVDDNEIWYLETATGHQWMAQRLPADQYFATGNQGRLQNYDPNDANMMGSKSLVAFATEKGLYNPQKDGKFNFSKAYTRDDERDRTYNDPRVWTIQQKFNPSVKQDMTAGRLFPVFMTPEKKMTLDDVKAVLRSHYEGTKHDPYSNGLNGKEPWRPVSVFRTYEAHVMQVRPWLPKEIGEVSYIGLGMADLTAFVPYYSGLKAYPANYTMGTDKADSQSIYWKYRKLQTLTMTDYPKLAPIVKKAYAEWEAKIAKEQQEVEAEYLNMAKTNKDAADKMLNDFNLRIMTDAEKLTEALTNQLFTLRTQDIQSDIFFANAAKKD
complement(261919..262829)         PROPHAGE_Ralsto_GMI1000: isrso12-transposase orfa protein; Z993_RS15735; phage(gi17546157)     3.30e-28            Salmonellaentericasubsparizonaeserovar18z4z23strCVM43478MKKTRYTEEQIAFALKQAETGTRVGEVCRKMGISEATFYNKKKFAGPGVTGLRRLRQLEDENQRLKKLVADRRCCRRYXPDTLRLPAYSYSVAPGGMACPQENPPDLLSRPEPAQKTPPQTCQCSTPSAAPGPDACRSVLEYGFRIGSVWTALPGAGCSGFSGMPGDPCRKIIEGRGCGPRNGSAAGAGASAGTYSDRRQRVYPEKSGMGVTWCYDGLLPPRKTDRPVYIVLMEACGMNAIFTGSCRWKMCRINSRSGAGNIITRGRIHHMTWLRQNLSEVSRKTNISGA
263322..264299                     ABC transporter substrate-binding protein; Z993_RS15740                              N/A                 Salmonellaentericasubsparizonaeserovar18z4z23strCVM43478MNIKKIITTILLIFISIPIFAKSVLVLYTSQPIEDAQVTVNTFEKHHPDIEVKWIRDGTTKLMTRIQAELAAGGETPDVLLIADSLSMESLKHQGLLTAYKSPQAKHFQSWLYDKNGYYYGTKMITTGIAYHSNAPVKPTSWLDLIKPELKNMTTLPSPLYSGAAQIHQATLMNNSRLGWSYYEKLRKNGAMPQSGNGAVLSAIVSGDKAYGFLVDYMAIRAKAKGAPIEFVFPKEGVSIVTEPVAIMKASKNPQGAKKFIDFLLSKEGQNMVLQQGYIPADAALPVPEGFPPRNSIKLMPFNRAKALTNTEVNKKCFAELFGSH
264313..266019                     iron ABC transporter permease; Z993_RS15745                                          N/A                 Salmonellaentericasubsparizonaeserovar18z4z23strCVM43478MLQYQSINHNRYKWWSWLLFCFITLLILLPILQLFIFAITDWQHGRNSNLWHVLSNPLTWTALYNSLYTSGLGTLFSLLLGNLFAFCLVLTNIRIKQITFFLVMLPMMIPPQITAMSWLQLFRQVGIFFNRIGLSQGFGWPNPLYSAEGIALLLGIQNTPLVFLLIQTQLKYLPQEYIEAARLSGASFWKTFHDISLPLCRSTIWAGAAIAFVSSLGNFGIPAMLGIPISLLVLPVYIYQILSSFGPAVLNEVAALSVLTGVLTIGIMILQKHMQRHYAFPLIGTTDNTLIFLLSNKWRIVIEILLSILIFSIVIAPLLALITTSLVPTTGVILNSDIFTLSAWKIIFDTQSATWRAILNSLLLSVSASLILMLLSLPLAWLLVRHPTRSLLWLYNILDIPYALPGVVLAISFILLFAHPLPLLDISLNGTLTIIFFAYMARFFTVCIKPVYSCMLQLDAAMEEAASLAGANVFQQFSHIVVPLLGPTAFSGAFLVFLSTIHELTVSALLWGPGKETLGVVIFNLYESGDIVQASAISVVVVIIVVLAMLLLNICSKFLPKGVMPWQN
266007..267032                     PHAGE_Bacill_G_NC_023719: gp245; Z993_RS15750; phage(gi593777701)                    3.73e-35            Salmonellaentericasubsparizonaeserovar18z4z23strCVM43478MAELRLEQLSKIFGNQTVVQKLDLTIPQGSFTAILGPSGCGKTTTLRIIAGLEQPSTGCLFLGSRLLANKIISLPPEQRNMGMVFQSYALWPHMTVEENVGYPLRLRQISSNIYKKRVMEALEAVELLAYSGRSPHELSGGQRQRVALARCLISNPEVILLDEPLSNLDRYLRTTMEKIFRELHHRTGTTFVYVTHDQAEAMALASHIAVMYKGTLVQWGIPQQIYEHPNNVWIAKFIGKGCILSLSIPGSEQFLDCTMLHQGFTQDRRVTYHNVLIRPEHVHLKNKGLPAKVENCIYQGERYLLELRLVDGQLLTAFHHSSVQPQQLVCIQLMQGWRLPK
complement(267385..269742)         PHAGE_Phage_Gifsy_2_NC_010393: prophage virulence determinant; secreted effector protein; Z993_RS15755; phage(gi169257322)     9.43e-84            Salmonellaentericasubsparizonaeserovar18z4z23strCVM43478MPFHVGSGCLPATISNSRIYRIAWSDTPPEMSSWEKGKEFFCSTHQTAALECIRTICHPPAGTTREDVVSRFDLLRTLAYAGWEENIHSGLHGENHFCILDEDNQEILSVTLDDAGNYTVNCQGYSETYRLTMETEPGEECTEHAEGASGTSCLPATTAPQTAAEYDAVWSAWQRAAPEGEARGRAAVVQEMRDCLNNGNPVLNVGAAGLTTLPDHLPPHITTLIIPDNNLTHLSTLPAGLQELIFAGNQLPSLPALPSGLRELIVVESPLTSLPELPSGLCKLWAFNNQLASLPALPPGLRELSVDGNLLPSLPALPSGLQSLSASHNQMASLPTLPPGLEELSVDDNQLASLPALPLRLQKLSVSHNLLTHLSALPPGLQSLWATNNRLTSLSALPPGLEELVVFDNQLPSLPALPPGLRTLRASNNRLTRLPESITGLSSEATVHLEGNLLSERTLQTMQNLTSAPGYSGPRIRFDMAGPSVPREARALHLAVADWLMPAREGEPDPADRWHTSGQEDNAAAFSLFLDRLRETENFEKDPGFKAQISSWLALLAEDDVLRAKTFAMATEATSSCQDRITLALHQMKNVQLVHNAEKGVYDNNLPGLVSTGREMFRMEMLERIALEKVRTLAFVDEIEVCLAYQNKLKESLELTSVTAEMRFFGASGVTASDLRSAERQVKAAENSEFSEWLLQWGPLHSVLERKEPERFNALREKQISDYEDTYQMLSDTELKPSGLVGNTDAERTIGVRAMASAKKEFLNGLRPLVEEMLGSYLKARWRLN
complement(269975..270325)         PROPHAGE_Shewan_MR-1: IS110 family transposase; Z993_RS15760; phage(gi24375433)      4.29e-15            Salmonellaentericasubsparizonaeserovar18z4z23strCVM43478MRWSHSFHVHCQDNGRALILKKFTRAKLFEFLANTPSAKVVMEACAGSHFMARRISSLGHEARLISPQFVRSFVKTNKNDYVDAGAICEAASRPSMRFVQPKTENQQAMHCIKECL
270479..271945                     PHAGE_Phage_Gifsy_1_NC_010392: leucine-rich repeat protein; Z993_RS15765; phage(gi169257209)     0.0                 Salmonellaentericasubsparizonaeserovar18z4z23strCVM43478MKIGSQPVTLQYAYTGNEATSNLELLNKWRIESPDIEREERNSIYNKIIEANHTGSLSITARHVTSIPVFPDNLSELTLSSCYTLESIPNLPDGLKSLTISENKNIKISYFPDSLESLSIDMQAYEENYSFPTLPYGLKSFTACYGKFLPPLPPHLSSLSLQNFSEILCAELPSGLDKLDLQSCPFLPLMKMLPEGLKELSIELIRTVSDTVIDDILPEKLKKLSINFCDNIKLPVKLPANLKSINLSSMTPVVWEIPTCNLPAHIDISTDGYVKLNPEFLTRSDITFSHKSAGDALSFQPGDVVYGLCKARDRVSTLVNSLYSFSKKDIIIQNTLTDAVWDRKNRAVFNKDEKIAERLNDVQRGIFFREYLSQHQKYNITEDKYSDLSNEECWIKTSKAGLEFQTRLREQSVIFVVDNLVDAISDIANKKGKHGNAITAHELRWVYRNRHDDRVKQNVKFFLNGKAISHEDVFSLVGWEQYKPKNGV
273077..273847                     PHAGE_Rhizob_vB_RleM_P10VF_NC_025429: N-acetylmuramoyl-L-alanine amidase; Z993_RS15780; phage(gi712912948)     3.59e-13            Salmonellaentericasubsparizonaeserovar18z4z23strCVM43478MYLIDYNSYRSVKGFNRRVRFLVMHYTSIDFKASIAALTGASVSAHYLVPDPSEKTYIAAGFKDMRIFNLVDENERAWHAGVSSWAGRSNLNDTSIGIEMVNLASDNNGMFVFPPYNPVLIDAIKDLSANILQRYPDITPVNVVGHSDIAPGRKSDPGAAFPWKELYDAGIGAWYEESTMQHYLKQFSKSVPSKTEIVAKLKAYGYGISDAGTEIGYKNLIRTFQLHFRQKNYDGVADAETAAILYALVDKYFPAK
complement(273928..274478)         PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; Z993_RS15785; phage(gi169257321)     2.67e-48            Salmonellaentericasubsparizonaeserovar18z4z23strCVM43478ITFKMSDTPQTINIFNLRSDTNEFIGAGDAYIPPHTGLPENCTDIVPPEIPASHIAVFDSETQTWSLKEEHRGETVYDTTIGNVYISTLARCLKMSHQFHLMVNTRNGMVRCGKTKRLKQQRSFVRRQKPKTGSCKHLKKLLSYRMRLILSQMMRKRSSTNGKSIGFQTGWMPQTLTGA
274621..274777                     type II toxin-antitoxin system HicA family toxin; Z993_RS15790                       N/A                 Salmonellaentericasubsparizonaeserovar18z4z23strCVM43478MKSTDLIKELTAAGCKLKRHNGGSHQIWWSPITGKKLTSRPCQIHKTGGDLA
274935..275072                     PHAGE_Entero_UAB_Phi20_NC_031019: minor tail protein; Z993_RS15795; phage(gi100055)     5.22e-10            Salmonellaentericasubsparizonaeserovar18z4z23strCVM43478RVTQAMIEKLAINKERQWPEPKDGEPKLRIKDAGSAGSGSARRGL
275182..275430                     PHAGE_Salmon_ST64B_NC_004313: Integrase protein; Z993_RS15800; phage(gi23505472)     1.08e-24            Salmonellaentericasubsparizonaeserovar18z4z23strCVM43478MWETARYSAGVAQGRKLKCTFHDLKAKDISDYEDSSREKQRFSGHKTESQVLVYDRKVKISPTLDLPILAKTEDDDGAKYTK
complement(275497..275586)         tRNA                                                                                 N/A                 GGAGAGATGCCGGAGCGGCTGAACGGACCGGTCTCGAAAACCGGAGTAGGGGCAACTCTACCGGGGGTTCAAATCCCCCTCTCTCCGCCA
275675..276430                     DgsA anti-repressor MtfA; Z993_RS15810                                               N/A                 Salmonellaentericasubsparizonaeserovar18z4z23strCVM43478MIKWPWKAQEITQNADWLWDDALAIPLLVNLTAQEQARLIALAERFLQQKRLVALQGVELDSLKSARIALIFCLPILELGLEWLDGFHEVLIYPAPFVVDDEWEDDIGLVHSQRVVQSGQSWQQGPIILNWLDIQDSFDASGFNLIIHEVAHKLDMRNGDRASGIPFIPLRDVAGWEHDLHAAMNNIQDEIDLVGENAASIDAYAATDPAECFAVLSEYFFSAPELFAPRFPALWQRFCQFYRQDPSQRLR
276572..276647                     tRNA                                                                                 N/A                 TCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA
276633..276648                     attR                                                                                 N/A                 CAGTCAGAGGAGCCAA
276819..277588                     PROPHAGE_Escher_Sakai: putative integrase; Z993_RS15820; phage(gi15834507)           8.94e-45            Salmonellaentericasubsparizonaeserovar18z4z23strCVM43478MPLCHLLILKKNAKPLDKEYKLTDGFGMFLRVTPKGSKYWQMAYRFDGKQKIFSIGVYPTVSLADARQRRDEAKRLLAQGIDPNAKKQAEVKELKAKRDNTRSFKSVTKAWFSTKKKWSEDYRHTVLNRLETYIFPDIGNRDITELATGDLLVPIKKKPLAISKLLHELSNTRPFYAMPSNSSLSAIIRLTIWKAPYRSQKRNIARRWSLKRFHCYLNVLMPTKAADPRWLFSLTCWYLFVPVSYASPDGQRTC
