gi|00000000|ref|NZ_PEQT01000002.1|  Agrobacterium rosae strain B20.3 1002678, gc%: 56.67%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(3276..3614)             PHAGE_Brucel_BiPBO1_NC_031264: hypothetical protein; CTT39_RS05235; phage(gi100009)     1.27e-08            AgrobacteriumrosaeMTGGGDLRRSFGFWQPTQGNDGFGGVVAGPPAMRFTTAGRFRVLNGDEIYLNGVVSGKRTVEVTIRMQPKSKTVNTTWFMRDTRDNRRYNIKLMTPSEKGDFITFRAEEGTP
complement(3611..4816)             PHAGE_Burkho_phi6442_NC_009235: gp4, phage portal protein, HK97 family; CTT39_RS05240; phage(gi134288632)     3.54e-69            AgrobacteriumrosaeMWPFKTQETRAVASSDPFLGQFLGARWQARADIEKASGHAVAHRCIQLVAEQLAAVPLKVYRKTDDGGRETASDHSLYTVLKDSFSPFLTAFEGREWMNVAALMYGNAYARIERNGRSQIIALHPIPSPSVTVERLSTGRLRYKVALQNGGTQTYTQDEILHVRYRTTDGVLGLSPIQIANATFGLALAQQDTAGAAAENNFRPAGAMVFPEKLSGNGKEGAIAKFKERFVGQMKAGEVMILDGGAKFETFQFSSKDSEFLESRKLSNLDICRVYGVPPSAVGITDDATYSNIGEESRALVTRVLAPWAKRIESVYNVTLLSPEARKTHYIEHDLSGLLRGDLSTRYAAYKIGREAGFLSVDEIRGFENMSKVEGGDTYMEPLNMSRLGMSQNAQASQVQQ
4001..4012                         attL                                                                                 N/A                 GCAGATATCCAG
complement(4803..5351)             PHAGE_Clostr_phi3626_NC_003524: putative prohead protease; CTT39_RS05245; phage(gi20065968)     8.60e-30            AgrobacteriumrosaeMILSNFEKRAATDVKAVGKKLTGYVATFGHETRIGDFSEVIQAGAFGASLRSNPDILALVDHDPGKVLGRSGSGSLILAEDQTGLRFELDLPDTQLGRDVAALAARSDIGGMSFGFNVPEGGDEWHGERRTLKAIDLREISVVQAFPAYSGTSLAVRSRKPMTDAQRRIRILELEGGAYVAV
complement(5342..5620)             PHAGE_Entero_IME_EFm1_NC_024356: head-tail joining protein; CTT39_RS05250; phage(gi658310466)     1.70e-12            AgrobacteriumrosaeMAAVSLAEAKTHLRVDYAEDDTYVSGLILAAEGYVSEIGVTIASPAQPPVKHAILLLVGHWYSYREAAAEKPPQAIAFGVDALVQPFREVSF
complement(5622..6791)             PHAGE_Halomo_phiHAP_1_NC_010342: major capsid protein; CTT39_RS05255; phage(gi167832350)     1.23e-36            AgrobacteriumrosaeMTNLFHLRETRSTKLAAIKALGDNPDTAAFTALETEIRSLDGQIKNAATIAEFERHEAAPQGDAMARELRSYSVSKAIREGNGDSLTGVEREVHDELSKGREVRGVMVPTSLIFGEENRAMLTTGTAGNTVATNMGGLIDRLRPVMAVQSLGATIISGLSGNLDLPRLVSGPNAVWVNEDEPTTASDATFDKVSLSPKTVSGEMYLSRRLLLQNGVALENVLRQDLAFVLAQALDKAAINGTAAAKQPVGILTQIPESATTATDLSDIAADLIAALQIDDVTGTTGFLTNPALMAVARKLKDGQQRNLSTAETFHNERVVATNQVPTIAGENPLIFGAWANLMIGYWSGVDILANPYTDASKGGLRLHAFLDADVAVRHPEAFAWKAVA
complement(6956..7156)             hypothetical protein; CTT39_RS05260                                                  N/A                 AgrobacteriumrosaeMTSRADLNEQRDDIEHHLLFLISDGAKAIASDKEDDWKAGEELLERASKLIAPLSYLENIISRQAV
complement(7307..7594)             hypothetical protein; CTT39_RS05265                                                  N/A                 AgrobacteriumrosaeMVLVGKAYSILADGLVDLLAPGESTHALIDYVCTNENSERFRFEPVQYPEGGLPEGRVQGKEGFDMSFDDILKHKFIENEELTEKIRSGVLSSKR
complement(7607..9271)             PHAGE_Cronob_ENT39118_NC_019934: terminase large subunit; CTT39_RS05270; phage(gi431811047)     1.03e-103           AgrobacteriumrosaeMGRRGPGAKPKASGKTGDIMSVAGSTHRQVLPWDEPGLSRLEAVVAFVNDMKITQGIYAGKTMQLRDWQINEFLAPIYATDEYGRRPVRTAVLSMGRKNGKTGLSAALALCHLVGPEAEQRGELYFGAMDKIQAGKAWAECKAMLEAHVELSERVNIIKFSKEIEVEAGYPGAGSVLKAVSADADSKLGLSPSFFLADEAGYWPKRDLFDAMDSALGARDEPLVVVISTQAKDDTHFFSEMIDYGLKVKTGEIEDESFHLALFTTDPDDDPWIYETWIKANPALGDFLQLEQVERMAGQAKRIPSKEADFRNKILNERIDGTVRFIAAREWNDCDLGPIDESALEGRECYGALDLSAARDLTAFVLVFPEEDGRFTVLPRFFLPEFDIAGKSENDRVPYDIWARQESSRLTLLPGKVIDPQAVAEYIADEAGRFDIKEIAFDRWRIEDLRRELAKASIDLPLQPFGQGYKDMSPAVDMLEVAVAQQKVNHAGNPLMKMCAANAVITKDPSGARKLDKSKASGRIDGLVALAMALQTAARHDEDNALPACLMEDA
complement(9427..9699)             PHAGE_Bacill_BtCS33_NC_018085: HNH endonuclease; CTT39_RS05275; phage(gi392972767)     9.60e-06            AgrobacteriumrosaeMQTPVCEPCRARGVIELADVVDHDKAINAGGLAFPPMEGLTSMCASCHNRKTNAKDRRTAKTGKSSGFRRAWAGFDVDGNPIDPEGWNDA
complement(9881..10132)            hypothetical protein; CTT39_RS05280                                                  N/A                 AgrobacteriumrosaeMNTHTENMQVINALVGKPVRWDSGLGESDEKVLTILRKRTEPASPIMLARLTGYTRHEVNSCLLRLKRRDLAETVSHGSWVSA
complement(10268..11446)           PHAGE_Rhizob_16_3_NC_011103: p101; CTT39_RS05285; phage(gi195546631)                 2.02e-25            AgrobacteriumrosaeMAEERKRNPYPFVLASEVKLREQGRYIVKDVARVDETVIWYGQPKSNKSTVVEDMLLHVAMGWDWMGHKVPRPGLCIFIAAERAEITEARLLAFRKRHGIDPETEIPFVIIDQRPNMKREDDRDRLADTIEDIERHFDMDVAIIAIDTLTQTFGPGSQNSDEEMASYGRGCVELRRFFSNCHLIIIHHERKVSQGEDKAGNGPKGATDLLGIVEGAIQVRVEGDPEERYREVHVYAHNAMQAGFLMSFSFEPVHIGKHVDPETDEETEVFDVVAFAVDRKEGGQSPRSGEKDAEKNSPQVQSDAMEILDIIEEVTNDRKDKADRDGKDYHPGNDLVGRELIKEIFEGRYHGVTMQRNRFKRAIDKALRMKIIGSGIYDKTSYRSLKNKENLD
complement(11449..11658)           transcriptional regulator; CTT39_RS05290                                             N/A                 AgrobacteriumrosaeMPMNENAQPRLISAKDAAIETTLSTVQLAAMAAAGLFPKPIQISERRHAYIRAEVTAFIDARIAARTTH
11738..11749                       attR                                                                                 N/A                 GCAGATATCCAG
complement(11932..13098)           PROPHAGE_Mesorh_MAFF303099: phage integrase; CTT39_RS05295; phage(gi13473443)        3.30e-79            AgrobacteriumrosaeMARNLLTETKIKKLSGAGIYCDGDGLFLRIRDTGSRSWVFVWRRKDASDGKIKRHERGLGGYDSGTAPVSLSLAREKAAELREQLARGQGVSDQTKTFKDIMDIVIDNKSAGLKGEASKAQWAMTLREYAKPLHGLPLSTLATSDVVACLAPIWNEKVETANRTRSRISAVWQYGKAHGMCSGDDPADKKVIEILMPKRTKRIVKNHAALDYRDAPKAIKALRKSKGTAARAVEFLALSAVRFSEALNAPFSEFDMKEKLWTIPAERMKASIPHIVPLTPRMIEIIEERRNLATCDFLFEGHKGGQPVTGVAMTKALRLACGDKAATLHGLRSMFRDWAGNETSHARETAEECLAHAVGNKVERAYRRSSAMDKRRGLMRDWGVYLEG

#### region 2 ####
complement(100354..100611)         PHAGE_Paraco_vB_PmaS_IMEP1_NC_026608: gene transfer agent-like protein; CTT39_RS05720; phage(gi764162046)     1.95e-08            AgrobacteriumrosaeMAYCFARVWTTADIPLDEVAERYRVEIVSDGVVQRAIEVSEAAGLYAASDEVADFGSPQTTLAIRVRQLGRAVPLGIAASAVLSV
complement(102785..103648)         PHAGE_Paraco_vB_PmaS_IMEP1_NC_026608: hypothetical protein; CTT39_RS05735; phage(gi764162044)     1.90e-69            AgrobacteriumrosaeMKTVPEDFAAHLAGEATTTCHCWKVSLRDGAVLGFTEHDEPLTFGGVTYLAASGFQAGENDSETGLAASSGEVAGGFSSEAVSEGDLAAGRYDGAKVELYLVNWQAPEQHVLLKVREIGEVTRAGGAFTAELRSFAHRLSQPQGRVYGRRCDAALGDARCGADIAAFRANGVVVSVDGTGRMVVSGLDAFAEGFFRQGKLMFSSGTNAGRSFDLDDHALRDGVASLSFWLPLEVVPQAGDEFTVTAGCDKSFAVCKAKFANHLNFRGFPFHLLARKGENRMYRAYGG
complement(103645..104277)         PHAGE_Paraco_vB_PmaS_IMEP1_NC_026608: glycoside hydrolase family protein; CTT39_RS05740; phage(gi764162043)     6.58e-68            AgrobacteriumrosaeMAAFHEVRFPLRLALGTSGGPVRRTDIVNLSNGRENRNQRWRNSRRAYDAGSGVRSVSDLYAVLEFFEARGGQLYGFRFRDPVDFRSCPPLTVPSAMDQRIGTGDGVTAAFPLVKTYADAGGGWTRSIAKPVEGSVVVSVNGLATTGFSTDHATGIVTFAAGHVPAVGAAVRAGFEFDVPVRFDIDRIDVSLSAFEAGRIPSIPLVEILP
complement(104528..105106)         PHAGE_Edward_eiAU_183_NC_023555: putative bacteriotail tape measure protein; CTT39_RS05745; phage(gi589889263)     2.83e-12            AgrobacteriumrosaeMADETNFAGQRDEAQALADVMEDLERRSQRFGSALTSALQAATTGGKGLDGVLQGLGTRLSNIALSAGLKPLENMLSSAVSSLTSGAGSLFAFANGGVPGRVTPFAEGGVVSSPTFFPMGGDMGLMGEAGSEAILPLKRGADGSLGVASAGGGGGTQIVFNVTASDAASFRRSEGQISAMLARSVGRGQRGL
complement(105352..105573)         phage tail assembly chaperone; CTT39_RS05750                                         N/A                 AgrobacteriumrosaeMSAAAGSSSDHGAKPFPWGQVIHAGLSLLRLSPTVFWALTPVEFFAMTGGMRPRRDGLDRGGLEGLMRAFPDG
complement(105570..105932)         gene transfer agent family protein; CTT39_RS05755                                    N/A                 AgrobacteriumrosaeMGAANFGRANRRRGEVEAVLDGERRILCLTLGALAELETAFAADDLTGLASRFASGRMKAADMIRVIGAGLRGAGNVFSDDDVGGMSIEGGIAGYATIVGDLLTATFAGTGTGGEAPASP
complement(105932..106339)         PHAGE_Rhodob_RcapNL_NC_020489: gene transfer aget (GTA) orfg9-like phage major tail protein; CTT39_RS05760; phage(gi461474972)     2.21e-22            AgrobacteriumrosaeMVAQKGKDLLLKIDNGGTFVTVAGLRTKRLAFNAESVDVTDAESAGRWRELLAGVGIQRAGLTASGIFKDQQSDALVRGQFFAGAIPGWQIVIPDFGTVAGPFQITALEYSGRHDGEVQFEIALESAGAISFGVS
complement(106573..106974)         PHAGE_Geobac_GBK2_NC_023612: tail protein; CTT39_RS05765; phage(gi589893772)         1.08e-07            AgrobacteriumrosaeMMAANALLQAVHTQLAGDAVLTGLVGARGIIDRLLPRPVLPCVAFGEIDSRDYSTASERGEEHFLTIEVWSEQGGRKLAQDIAVRILTLLDDAPLVLGGGIALVSLFYRNSRSVRQAKTKQFLTEIRFRAVTE
complement(106971..107306)         PHAGE_Paenib_Fern_NC_028851: head-tail adaptor protein; CTT39_RS05770; phage(gi971749409)     1.87e-14            AgrobacteriumrosaeMNLTFLDPGQLTARLELEAPEELPDGQGGVAAGWQVLRSLWAAIEPVSQGAYERASADGVAITHRIWAGFRSDIEAGMRFRKGTRVFAVKSVIDPDETSRFILCRCEEESR
complement(107310..107879)         PHAGE_Brucel_BiPBO1_NC_031264: hypothetical protein; CTT39_RS05775; phage(gi100008)     7.70e-14            AgrobacteriumrosaeMTYATLTPPQAEALTLADVKAHLRLDGADEDALLASLITTAREYLERQTGLCLMRQSFRLYLDDWPLNGVIQIGKGPVQAIETILVFDDAGDPTDITDTDKLLDGQARPARLWLRQPPAPGQPLNGIEIDFTAGFGESGADVPDTLKRAMLIHIAHMFAFRGAVSPADQPAGVPAEYERLIAPFRRVGL
complement(108324..108578)         hypothetical protein; CTT39_RS05785                                                  N/A                 AgrobacteriumrosaeMILPGNSRQVIVDAIADCPIAPHATTSKIVSDLSNAGYAIVHRDEMIDILNGLMTIIKRFDNDGETLTDIDVAKATVLCDLLAD
108746..108943                     hypothetical protein; CTT39_RS05790                                                  N/A                 AgrobacteriumrosaeMADIFDRVDDALANKVELFEQDGLWTVRVTEHGVVAVFSFPEMDKAVDYAETERVRLAIAQITFL
complement(108964..109467)         PHAGE_Sinorh_PBC5_NC_003324: hypothetical protein; CTT39_RS05795; phage(gi18071228)     6.85e-09            AgrobacteriumrosaeMTFNWNGQGGQPDWLWGGVDGTNMYVYNPNNFSVRNSAQLGGLPASDYATKSDLNASSNAFQSGNQLYTGNGSGSVAHGLGRKPNWYIAEMVCTTASNGWAVGETFDQASCMQPWAGQGSFGISIWATATTINWKIGASGIGIFNKSSGGSDPAPAANWALRFRAGF
complement(109491..110654)         PHAGE_Burkho_JG068_NC_022916: tail fiber protein; CTT39_RS05800; phage(gi560186115)     2.41e-05            AgrobacteriumrosaeMVDISDPKWSEQDVANNGAAPDGIQGAYAPSTIAPILRSTRGAVKRERNRINAVYTTSGTATALALTFAVAPDALRKGDRYAFFASQTNTGAMTLNVNGLGAKAILQQDGAALAAAQIVSGSATTVIYDGAAFRLENYVSNPKFTGTLSVDAVAATTITTSGAMTASGTVTSGNVVSAGLTINGAAGTDRVIGWQSAGKQRWSAFTNSGSESGSNNGSDFAIARYADNGNYIDAPLLISRVTGNIFIEKQLNVKGRVYAGTGGTFLETDGNIVFTGSMTSQGSTLSEALGRKAPLASPNFSGVVGLPGVSANEFKQGNADGASYGSYNLAMKGWWGMGMQDHTNTVNGYYDFRVNGTPKAARSRMAPNTFFQTVALTASTSLAPLER
complement(110726..112576)         hypothetical protein; CTT39_RS05805                                                  N/A                 AgrobacteriumrosaeMAMPWEMDWNQPEKEKSVDGPTDRMPWEQDWSAEQDAEPETVFSGSLLPFSKDENGEVSFDSNAGLLGGFKRAFMTPGDAMAGKFDPMSEEGIGRAFEFATTFSPAGARFASPKVADAVVPRSGFNPVKNRIIGGADEGAVIAQRVKDFTDIGVQPTTGMVSGSTRAAAKEQALASTGVGTNLQARMADAFTKQGDEFTRVVDGITTRNNPAAKTNTRQELGDMLREQAQAAKDAAFARSEGLYDDVGRLTGERAVSGDATKAFSKTLAETKKGLGKSETINRGPQLDQAIQQTKAIVEDMGKGMTFTKLKEARTAISQIANKPDADPALKAHLQGLRNAITADMEATARGAGENALQAFRKANNYYRRTVDTDTGFGKGSAVSTVLNKNTPEEIYGYVMGKSKEGGSRLNAVRRQIEKSDDGKAAWDNLTGSVVERMGLKTADDVSSYDPGTFLRNWKTMAPEAKDVLFKGTGRSQYRADLDRLARIADDMGRYNKQKNHSNTQTHKTMLEEANPFDKTSLLAAALGGPKAFVLAAGAKAGNFATKRYQAKMLADPETVRWLAGIPKAQVEKGGLRTHVGNLVDIARKTPDAATRTAVHEYLRSVGYEVQNDDNE
complement(112576..113550)         PHAGE_Bacill_phiAGATE_NC_020081: putative tail lysin 2; CTT39_RS05810; phage(gi448260828)     2.96e-11            AgrobacteriumrosaeMAKPNLNSNAMYAYRYLQDKYKLQPHQAAGVVGNLMQESTMNTGARNPGDGRDGTDSIGIGQWNGERARNLRAFGGDNAGSLDTQLDFVMHEMNGKGGNGAGSEAYAYNKLMSADNFHDATAAMISFERPQGWSRANPTAGHGFDNRLSWAGETLGMSPDQIAAATPKSSQLPVVQADAQLQAQAQAAAPDERGFGQKLFDRVLGTETADQAKASVLPKILPDEFMGVNTKKGVNLLGALATTMGNEDQTKQLNQQAQQSAQSGQARRSQAQPVQMAFMSSQAGAENKVPGGISSQTKLTPQQLMELLKKQKMGGLGGLGGWRV

#### region 3 ####
108068..108103                     attL                                                                                 N/A                 GGGGGAGATGTCCGGCAGGACAGAGGGGGGTAAGCC
complement(115033..116565)         PHAGE_Brucel_Pr_NC_019447: structural protein; CTT39_RS05820; phage(gi418487858)     6.26e-05            AgrobacteriumrosaeMASKPPKETTTKVEPWDGAKPYITKYLEQADKLYSEGKPEYYQGSTVADQSSATKSALAQQEAMARSGSAASGLAGASNAVNNITSGNAFSGQANNTLSQLQNGVNLGANPAAGTAASLAAGGANAPGNPTLAAGQNFTNAAFGAQQAQAGALASGNNPAMDYLKQTASGANIGNNPYLDSMVNNQQTKIADQFRNITAPQIDGQAASLGRMGSGAYATQRNNAETTAATAMADVATNMYGNQYNTDKDRQLSAAGQYGNFYNSDQTNQLNANQNLASTSSNQQGLRNDAANASNSQYQFDKNLQLQGAGLQSDIYNSGISNQLQNGNQMLNAANSQAGNQVAQANTQLAGAGMAGEQYANQYLPTDKLAQIGQQQDTRNQDVLNAEIAKWDFQQNQPLSAAANMINLANGGNYSNTSTPVYSNSSSQGLGAITSLLSLLSLCDERTKIVFECVGKFPNGIPMYRFAYKDNPDEIFIGPMAQEVEAVLPDAVVEINGIKHIITDTFMEAA
complement(116578..116988)         hypothetical protein; CTT39_RS05825                                                  N/A                 AgrobacteriumrosaeMAVQRIDTAEQFHTEYPRVREWLSKALKRQVSGGSEEDLLNGLVERKYLLWTSEHAVAVTQILNVDGADVCNLYLVGGKRANALDEILGDGMDEVEQWAKSKGCKGFYGIGRPGWENALAPHGFKVQSINLYREFE
complement(116988..117284)         hypothetical protein; CTT39_RS24655                                                  N/A                 AgrobacteriumrosaeMQSIYNPDDKRAMQQVINDLVRQFENTGSVTLATSTTTTTVSNPKVLPTSVIVLQPTNIGAAAVAASTFVSSKTSGQFTITHTSTTTSRVFDYVVHGA
complement(117309..118847)         PHAGE_Pseudo_NV1_NC_042107: recombination endonuclease subunit; CTT39_RS05830; phage(gi100052)     1.62e-10            AgrobacteriumrosaeMILDSVFGPWRPDLPDLNNPGVTVARNVTPGIGALNGSVTYNPLRRAAVFSNTAMASRPTGTAVGQDQYGNAKVYGGCASKLYRLSPETRAWTDISRSSGYTSGNRDRWNSVEFGSYQIFSNFNDDPQYIDMNSDDAPGTTFKPLTSLARGRYIGTHKGFVILGNTWDPLDGAKINRIRWSGQELPGDWAFSAQTQADFQDIHGYGAIQGIVCNDSVWIYMQRAIVQMTYIGAPYVFRVDTRVEGKGCTIPESLITVEGKTFFFSEDGFYMHERGDQLAPIGIGKVNKYFLADADVSQFQYMTAVADPRETLIYWSYVSNEAVDGTPDKMLIYNYQTGEWSEAEATADFLFNARSLPWTIDQLDKYGSIDNVPASFDDPIWAGGNAMMWAMDVTGKIYSFSGPTLSALIETQEQHLINAVRALDPRLTGDRTNVLGVRPIFEGFGASVAISVGSRSLSNEEVTWSMPSTTHPDTGFAPFRLQSRFHRVRVQLNGDWQKAYMVHIDANSAGFR
complement(118844..119434)         PHAGE_Sulfit_NYA_2014a_NC_027299: hypothetical protein; CTT39_RS05835; phage(gi848469669)     8.46e-10            AgrobacteriumrosaeMALNTYDQIKTAVADYIMRPDAPIDSFIALGQSDVAPFIKHYLQEATVNLTTAANAVTLPADFQEARRVVVDGELANPTSIYRKDFIACSANYYQKGKQLVFVPQKNTSRSVELTYYARFPFIDTARQSNWLTENGFSSVIFHAALVRAYRWMKDKDSEAVEKNSLNEAIANVVADHNRATGSGNQVEIDFGGPLF
complement(119436..119666)         hypothetical protein; CTT39_RS05840                                                  N/A                 AgrobacteriumrosaeMIEHVVPVEQVIDNNKAAEASFNRSRRLGDLVHQAELPAQMYYDLLEQGVIEDRDRLKRFLNDPDNKYLRTNNLRV
complement(119811..120764)         PHAGE_Pseudo_Bjorn_NC_042103: DNA topoisomerase II large subunit; CTT39_RS05845; phage(gi100005)     4.37e-37            AgrobacteriumrosaeMATYTSYSAKNVAEDVDGIINNIDPTETPLYSSLKKRSASNRKVEWLSDEIRPSNPQNTVAEGANSVDSVLSSPKRRNNYVQEFQGVVNVSDIANAVGTIGYKQELGYKIGLEGKALKLDIEEAIVGNNPSRPGVEMTQGGLFAGMESWISTAVSHGAGGETDGFDENTHLVSAPVDGTLRDLTEELLLDTLQISHEAGGKPSKIILPAGLKRAVSRFSGDAIRNMDTKDRKVTNTVSIIEGDFGIYEVMYHDRVRSRTVIAYDPDLWELATLQGFKQKDLPANGSYQRKLLNTVVSLVCKNEKGNAKIADVKRATA
complement(120781..121827)         PHAGE_Pseudo_Bjorn_NC_042103: DNA topoisomerase medium subunit; CTT39_RS05850; phage(gi100004)     2.87e-05            AgrobacteriumrosaeMETTNTPSEGTGYSVAEATAHIEQFLDSEGTTEQVDADNEADEVSSTLEAEVENDTDTLETESDEADLEEAEGETEQADEPNAVDPNEIVFEHDGQKITREEATKGYLRQSDYTKKMQEIGSLRKQWVVQEVEFHQVRAQSEQALNNLAAHVAQVFEMSDFGQEPDWEYEFQTDPYEANLKRIRWEKDRNAWQQKQSAREEAVKAIYDAQNEVARQNKAHLQAKQQHEIIESREVLAGRLPDVFGDPKKANVRLVEMSSFLQDQGYSQDEILNVTDARTIALAHYAMVGMEAAKKVKAAVQKIEAKPALTMPGTQQRGKTTSALEKDVQRLKRTGSLDDAASALSKLL
complement(121888..122142)         hypothetical protein; CTT39_RS05855                                                  N/A                 AgrobacteriumrosaeMNQEIIARGQNAKRVLALPEFKALVDEVQTELFDQFRKTNVNDRSEREEVHRIVYACDLFVHRLEKYVALAEDEISHSQQVPDA
complement(122153..124393)         PHAGE_Pseudo_NV1_NC_042107: thymidylate synthetase; CTT39_RS05860; phage(gi100061)     6.53e-36            AgrobacteriumrosaeMAKITKTKKIDEDAITRSVALAVKEAVGVSVTNIANKQEEALKLYMREPFQTDKAGDGKSKWISADVQERTDWATSNLIRVFDSQNQVVSFCPNEPNDQPIADQMTDVCNFVVRSKNSHVAMLSPWVKNGFLTGLGITMVEFRKEREELKEEVLTGLTDQQLVDLVAQEEAGQIIIEERGETYDAPAQAMPGMPEELAAIAAQMQPKVRDIKIRRIREIRQMNIVNLPPEDFIVSKDAQFDQQSGGIKAKLQGHKRTLSRAELLEMGFDKAKVASVPLANAESDGMALQRSKETDYDDGIGEVEDDVIVYEVYTKMAISGEKRRHYRLVLGGDLENKPVLLHYEEVSKFYPYAAFVPYSIPNTLFGQGMVDRVGPTQRLVSQITRAQHDNLNKSVNPITVYNPDLVRADDLLNIHAGKAIRSEDPSAGISWVQHPFTAMQAQPMLESLKQDLDYTTGVGGALASVNASDLQNTTATANAQRASSQQMLVEQICREFADTGYRYLFRIIVDLFVSNPQDAEIYIRRLTGNYTPIQIDMWDADMDVTANVAFGVTDKIGNSANLNMILGLQQQLMPMGLSNPQTLYHTAVKIAENSGEKNATPFFVDPSTLPPQPPAPPPPDPNAALIEEMRIKAQLDQAAKEREYEFEMRKLIIENDFKRDQMAQDLYLSEAEINAKYKAEVDIARIQQEQARERSDVDFAIAAQDAQVQIKAAQQQQAQQEQAAAQQAMQQQPMTPPQAPMMPPQF
complement(124471..125886)         PHAGE_Entero_phiEf11_NC_013696: putative phage terminase B protein; CTT39_RS05865; phage(gi282598712)     3.45e-32            AgrobacteriumrosaeMNLNEEDQKQFLELLKQFHDDIELFAVSLFGPDNALRPKQIEFCNAFRNSKRITFKGGVGFGKTRALAILVWWSLFTHDQVQVTIFGPNEGQIKSGIWKELQILHGKMRPIWKDLWDVTATRIQRVKNSADCFAEFRLANKDNVSSARGIHQINNFVFVDEATGVPDEIYTEALVNVLRDPNGKLCLISNPSTTGGYFWETWNGNISQMWTKVHGRMTDAPHITAEDLKAAEIEYGGRFSREYRILVLGEFPLSDTDGLIPRNLVEQAIENEDAKPSERLPIIWGLDPAEGGDRSVLVIRHDNKVLDVHSWRGLETKQLAIKVRDLYQATPKAQRPIAVCVDAIGIGNGVWSDLQYMGLPAKKVIVSSSPTRRADFYSRLRDQLWWECKEWFATENVCIPNNEDLVKELLLPTYESESGKIKVEKKADMKKRFKGVSPDHADALCLTFAISPTRYASKYEWTPPVDLRQYE
125989..126255                     hypothetical protein; CTT39_RS05870                                                  N/A                 AgrobacteriumrosaeMKIQYEIAEGHKRGENGLNEYLKTNPGIAAEDATTQWIEKRFGTWITTTISEDYKFEQTSSKSFVVDFTYDDDGQKFLAMLGGHELEA
126255..126644                     hypothetical protein; CTT39_RS05875                                                  N/A                 AgrobacteriumrosaeMADRILSEAQKAALARNSFKPGQSGNPKGRPPVPDEIKEALQAKTLEAVAVAYDLMMNSTNEMVRLKATDMFLAPFVSKAAQKVDVDVQVTHMADILADAARARKALQGQIIDAEVIEVHPIDADPHSK
127091..128038                     hypothetical protein; CTT39_RS05880                                                  N/A                 AgrobacteriumrosaeMSVKKETTTNSENSQEISRSAFDHAGSGLEVPASVKGVISTLNTKAADIVDKELKARHVTYEYVAKLCDAAIKMGDENDEFTLGVQKIIDHLIGKPEKESWGGEGFRQPNPFLNLCRIADGAWGMKVLSVKAGTTRLTWMPNRSGEKFAGVCRFAVRNGFSGDEMLEHFLSGAPFILPMPTGEKKEIKATINAVIAEDRLQNESEQRDILSAKDWKEIFDLKPIVTLPFTKRLNSALTLSEGGIGLCAVRVVGDQLYLLGDAGFEPGNPVLRQFKKHKGFLWEKRKVAMQLEDEVMTLPEEYLVDFDEYFLENAA
128035..128721                     hypothetical protein; CTT39_RS05885                                                  N/A                 AgrobacteriumrosaeMKELGKTKRDGLRAIPFSLEIEMTRYQDVHSIRARGIRAHLRVFAQQFARGEWPSDNQVRRFLLPDQIVEWRAAVDRHEKVRLEQQDARFLSKEAGLTILHNVTQDGLLLRREWLDLESSEAKLRTFKSTNASRIRVFERRAKLWRAAQNNRAVALRREIELFTDDHWTFVKPDDVFDWLVHWRSDQEVAHIPPEILFAEIIQLFHGWISEWDEKIAGYESLENPTIK
128834..129349                     hypothetical protein; CTT39_RS05890                                                  N/A                 AgrobacteriumrosaeMYFKRETDYATVQEALLTAMDRHEYIVRVVDFALLANAFNLTIQVSGLNRPDLSAAPLAKLREIKEKSEYQTIYWYKGGPVKRDDFITPDKGFEYLTQLANKPLMVVAVDIFAERMEQRYIGIGFCEYDSDANAQNQKIWDENFHKTKKFPDEGFDLKTPTPLPDDRGEYE
129464..129988                     hypothetical protein; CTT39_RS05895                                                  N/A                 AgrobacteriumrosaeMAVDNYYDRAKELQAWALDMTNHIHEYHAASWRINFHIGKTFYDSQLMHLEDKKTDLTFTMIDDGNVKEINEVRFWAALDLFIKSYEYAVAYNHNTVDADHDGALEVVEHREDHILEFKAFYSLYDDHQGKNVNMRFRFFATKNEAMIWSMQLSNPELVGQNGSQIGPKFHWWK
130050..130505                     hypothetical protein; CTT39_RS05900                                                  N/A                 AgrobacteriumrosaeMPDFSWLVKNPYNIAVALGFMIAFYSFSWLSSIEGAYQDRIIRFQDGITSNVLVKEYMDKKFEALREDVAKTSTVYDAGQTLRKFQSQFNEDFVKAFNIAEVQKELDRAIQPISTWKPTVGAAFGVMLAMFGLFNLIMEHRAAPPMGGRTG
complement(130562..130942)         hypothetical protein; CTT39_RS05905                                                  N/A                 AgrobacteriumrosaeMDSLLLPIFNHHWLPHNALWHSVKAIGLQENLTRAGITLAAPETDSPVVSMATVHTCEIIGESLGFPLALLASGYNHHSLLSSISKASIRHGIRIELIVNIIKGIWALSTSQSATPYGSAEFYCRC
complement(131126..131512)         hypothetical protein; CTT39_RS05910                                                  N/A                 AgrobacteriumrosaeMANALETLKAAATTGHVGGQNPVEIFYTKLKTQIDYAGQVKDGKAINTRSLWFRKQGAEYVVRIGRNAFEIAGSKLFKAKDLDGVVTILNAAKEAIQTDTKLQDKIALHSMERSERLKVGRAKSKKAK
131752..133527                     AAA family ATPase; CTT39_RS05915                                                     N/A                 AgrobacteriumrosaeMYLKTICIRNLGPIAKFDLEFPEPTAGVHKPVIFVGKNGSGKTNLLSLVGDALIEAAAQFFQNATPGLNGPNRPWFRVVGSTTVSLGSQGAFAVLQFDDEGDRIVYHQKAGNFPLSAAIESAPGFTFDGISWPDTGNTKSISISNDKAETIFLKNQLVYFPSVRNELPDWLNTNSVTRVEFDLSQRFSSSLHKPIYVESGFVRIKQWLLALFIDTRVDIIGSTNAISENVKANLQNQLLVSHANRPPLVLVNEILKIILDNPDAEIGWAGRNHPGKLNVISPNGILVPSLDALSTGQATLLNMFGTLVFYHDQNPHIQQQGICVIDEIDAHMHIDLQHRALPRLMKLFPRIQFIISSHSPVFLLGISKLFPDSGALVIDVPSGLPVDVELFSEFEKAFDVFRETIAFGEAVVEELRSEGPLLVLLEGETDPLYFNAALDILDEHDLKGNVEFRWIGSTDPKSGQGFHTGKTALDHTRNLIMSKPDVLKRRILLLYDNDSNKMSEDHEGLWIRAIPTNGANSKIRNGIENLLPENCITDDMYDETTKDKGNGTITTVRSVDKMKLCEAVCLTPNKENFVGFSEVFKIIRGII
complement(133671..134291)         PHAGE_Cellul_phi38:1_NC_021796: site specific recombinase, serine; CTT39_RS05920; phage(gi526177626)     7.19e-18            AgrobacteriumrosaeMKYVAYCRVSTQQQGKSGLGLEAQRSAVAAFVGSHPILAEFTEVESGKRDDRPQLEAALDEANAHNAILIIAKLDRLSRDVHFISGLLKRNVPIKACDMPNADNFQFHIMAAVAEKEREMIAERTKAAIAAKRARGQEWGTNKARTEQATAFAEGIHTHVQTLIRSGTNTPAAIAKALNEAAIRTPGGAEWGTGQVVRLLLRLGHV
148736..148771                     attR                                                                                 N/A                 GGGGGAGATGTCCGGCAGGACAGAGGGGGGTAAGCC

#### region 4 ####
143810..143821                     attL                                                                                 N/A                 CCTGTTCGAAGC
complement(144165..145952)         PHAGE_Bacill_phBC6A51_NC_004820: Site-specific recombinase; CTT39_RS06015; phage(gi31415812)     1.44e-13            AgrobacteriumrosaeMQQVAQNRMAYSYIRMSTEKQIKGDSMRRQLEWSQTYAARHGLDLQDTSAFADIGVSAWKGLNRSKGRLGAFIELAREGAIPSSSYLLIENLDRLSRTTPLEALDLFKEILQLGITVVARGEFGDEETYTWNSLNSNSNQLISTLTSMLRANRESERKSQLIRSAMKNRRADARLGKKTNQTPPSWITATKITKGEYEYHLNDRADVVRWIFERSAEGVGFDRIARELNAKGEPTLKPSKRGWWHANIQAIVTSRSAIGEYQPGEMIDGKYVSEGDPILDYYPAVIGHDLWLRAQKIVHRNRKGGRAGTQFSNLLDGLAECVHCRSRMYMIGNSRSDKQWKYLVCSANFRNIMRADEVTGESVPVCSASRSRFRYDILEKSILENVTEFGGDDLLKQGKVTAEIAEIDEELAKLSISLIDLRKREARLTEVIETEDGAQIAGLLKALRERTIEREDAEKRQETLRHDREVMAAKHAALDPASAIEAMRRAWESADDETRYALRVRTNASMKGMIDHVEFDSEGNHYTVIIEQGRRAYRFANPKFVRKDIKIIPQVADFVQHAIDVPLGGYADNQQSPEMIAATESIQRLKALPVK
complement(146018..147181)         PHAGE_Salmon_ST64B_NC_004313: Major capsid protein precursor; CTT39_RS06020; phage(gi23505451)     8.85e-84            AgrobacteriumrosaeMTEQTVAPQIKAMPDTMTAAFDDFMEAFEAFRETNDQRLGDIERKMGSDVLTREKLDRIDKALDDNKQAMDELSLKKARPALGRRGAANAETEEHKAAFEAYIRRGDEGALRDLEAKAFSGSSGTDGGYLLPHETDSDIGKRMAVVSPMRALSTVRQVSGAVLKKPFAPSGMATGWVSETAARPQTNTPQLSELTFPTMELYAMPAATQGLLDDSAVDIEAWIASEVDIAFAEQEGAAFISGDGVNKPKGLLAYDTVANSAWEWGKIGYVATGAAGAFASSGPLDVLIDTVYSLKAGHRQNGSFLMNRKTQSTLRRVKDTTGNYLWQPPASAGQAALLMGFPVAEAEDMPDVAAGSTSIAFGDFRAGYLVVDRTGIRILRDPYSAKP
complement(147472..148044)         PHAGE_Marino_P12026_NC_018269: phage prohead protease; CTT39_RS06030; phage(gi399528321)     1.55e-29            AgrobacteriumrosaeMHAYRGPRPATRKFANLELRGIAFDGTFSGYASVFGEVDLGRDVIEPGAFKRSIEERGASGIRMLYQHDPAQPIGAWRTIREDERGLFVEGVLAPDVARAKEVHSLMKTGALDGLSIGFQTVRAGKAGRGGIRRILEADLWEISVVTFPMLPSARVSNVKQARFFRDRETELVRAMRRMAKSLAGDTFRR
complement(148090..148410)         hypothetical protein; CTT39_RS06035                                                  N/A                 AgrobacteriumrosaeMSEFANEGSIWAARFTGAVAGAGVSLIYMLPQTHREAASRFLTGLACGVIFGGPVGLWIAQRLGISAGLSSQEIMLTGSVAASLCAWWGLGVMVRVAERYAARPKP
complement(148807..149970)         PHAGE_Salmon_ST64B_NC_004313: Portal Protein; CTT39_RS06045; phage(gi23505449)       7.07e-23            AgrobacteriumrosaeMRFFSHLPWRHPVGREPVREEKAAGGFLVLSGEAGRAHWSGRGYGALSREGFMRNPVSHRAARMVAEAAASVSWLLYEGDDEIGEHALLRLLARPNGQMSGPDFFEALYGHLLLSGNGYIEPLMVGERLRELHLLRPDRVSIIEGADGWPAAFDYRAEGRAARRIAADRDGLGLLHLKLFNPLDDHCGFSPLAAAGAALDLHNAASIWNKRLLDNSARPSGALVYQPKEGGNLSTDQYERLKRELEEGYAGAVNAGRPLLLEGGLDWKSMGLSPKDMDFMEAKNGAARDIALSLGVPPMLLGIPGDNTYANYQEANRAFYRLTVLPLINRTAASLSAWLSPLFEGTLRLEPDMDRIAGLSGERDALWARVGAAGFLSDEEKREAVGY
complement(150043..150351)         Dabb family protein; CTT39_RS06050                                                   N/A                 AgrobacteriumrosaeMIRHIVFFTVAEANRDAVRKGLSGLTAISHALKLEIGENVKKDQWGNSVDFIVYGEFENEAALAAYKADPAYELSTNTVKPLRDTRVAADFDSDRAVKEPIK
complement(150394..151029)         PHAGE_Sinorh_phiM7_NC_041929: putative major capsid protein; CTT39_RS06055; phage(gi100319)     1.18e-35            AgrobacteriumrosaeMFDRQRFFATIRTAPFSGRMSAQQVQGTELVLDEFEERAPGGDIRHLAYMLATALHETAATMQPVRETLAASDEAAIRILDRAYAAGRLGQVRTPYWRRDAEGKSWLGRGLVQLTHRRNYEAMSAVTGIDLVERPERAMEPQVSAAILVEGMLRGSFTGRRLSQYFNVSRADWEGARAIINGNDRAALLAGYGRSFHTALMASRIEQPAVG
complement(151603..152358)         carbon-nitrogen hydrolase family protein; CTT39_RS06060                              N/A                 AgrobacteriumrosaeMTIVRIAAAQTIEFREDIEGALACATKLFDEAGNAGARLLCFPEGYLQGYFTDDTSARRVALDVKSREFNKLFERFPMSGPMIVMGFIEISKGRLFNSALVMENSTVIGCYRKQYLLPGEHAFTAGEDTPIFEVDSLKFGINICYDTNFSASARCVADLGAELIVCPANNMMLRDKAEFFKDAHNYGRGDRCRETGLWLISADVTGERDGRVSWGPTAVLNAAGQVVKQLPLEIPGLLVVDIPVRKEAVGC
complement(152440..153699)         PHAGE_Dinoro_vB_DshS_R5C_NC_041921: hypothetical protein; CTT39_RS06065; phage(gi100023)     1.72e-87            AgrobacteriumrosaeMEALLAERHQRNHVFRLKNDWRMIGNHVQQPPEGDWRNWLLIGGRGSGKTRAGAEWVHLIASTGDHSDLRIALVAETLGDAREVMIDGVSGICRIARRKRPDFEASRRRLIWPNGAMAQIFSSEDPESLRGPQFHFAWSDELAKWRYAQETWDMLQFGLRLGDRPQQLITTTPRPIPLLKTLMADPSSRVVRMRTQDNAANLSPGFIDAMMKRYGGTRLGRQELDGELIAQRDDALWKRADLEAIFDDKPETLARIVVAVDPPAGSGEGSCCGIVVAGIGIDGRFWVLADCSAESVTPAGWARAVVAAFRRFEADRVVAEVNQGGEMVSAMLKSIDANLPITMVRASRGKFTRAEPVAALYEQGRVRHAGRFEKLEDQMTDFGPDGLSSGKSPDRLDALLWALTALAMETMAEPRVRGM
155706..155717                     attR                                                                                 N/A                 CCTGTTCGAAGC
