gi|00000000|ref|CP027413.1|  Salmonella enterica subsp. enterica serovar Typhimurium strain 93832, gc%: 53.12%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(53540..53863)           PHAGE_Escher_HK639_NC_016158: DNA pol III theta; CEP98_00335; phage(gi356870660)     4.70e-22            SalmonellaentericasubspentericaserovarTyphimuriumMSGLNLAATTKEEQDKVAIDLVASGVVYKERLAMPVVAELVVREQPEHLREYFRARLEYLRNSRTRMPRNMPEKRMRLKNSAIPDAFCLSLAGFYACRVMFFSGRGV
complement(54099..54533)           hypothetical protein; CEP98_00340                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMYGTVSTICCDLLKVYENHEKIAVIIWCEGDVREMGAEFNPTADDIQAVLRAIGESDSDALWRDGIGQNFVEGVLRELVALRPPRQIAVPEDVLRTLLPLMEAGMNLPRYQTQDRAAEEETALDTLRYLLSTNIPAHNLTEGNY
complement(54600..55034)           PHAGE_Pseudo_YuA_NC_010116: hypothetical protein; CEP98_00345; phage(gi162135127)     2.72e-17            SalmonellaentericasubspentericaserovarTyphimuriumMQYSNQQRARVINVEESDRLSFLPYMFGNDFMLAELQLYALAKKWMPEYNGGFWHFIRLPEGGGYMMPDCDRVHMINGENWFDRTVSADAAGIILTSLAINRRCWTHHDCGNAALTRLYMLRDTQLWNHITFHPECNAIYAALD
complement(55047..55353)           DUF1472 domain-containing protein; CEP98_00350                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumLPAVALWFSTLTVLCRVRAVPCIHRSRAVVDTRVKCTRRSPGPSFTSAAIFRSFDRSGFTVSPFSSRLPCASGCGFPCALASTIDRPTGMDARHRPVSRNMT
complement(55530..56294)           hypothetical protein; CEP98_00355                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMRNTLSTLIVRHGDNLLRRSGWPETVGVTQVAPGVVPGWLAVCGVLSAAEILALTTHLCQPLNYGRAQLLTASAQRLAGTPVRLHLYPVQAYPHPATVRECTEIRLPYAQEWLTTDEYADLLAFLKASADRVCEIVRQDTKRIAAALAPSGESRLMEKRIGNWRLLADEYDHDNWLDEEDEDGLDKVLDAVLVRNARFCPVLLTLVNEPEEEIEAAGVITDCLRFPGEPNRRWLDRRVLRDVVNEARSFTGNIR
complement(56366..56779)           DUF1380 domain-containing protein; CEP98_00360                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMMYGTRKELNSKLKRMFGNDERFALLIWTKQDVMSLTQAMTEVEADAILREIGRKGMGEHTGDGISDSTVQALYAGLRTEIPTVSVPADLLARVTNIAGRALDTEDAQAWPLVCQEYPGVADAQVDIARLRQLALAA
complement(56835..57056)           PHAGE_Entero_N15_NC_001901: gp50; CEP98_00365; phage(gi9630517)                      3.61e-06            SalmonellaentericasubspentericaserovarTyphimuriumMNYSGHEKLRAEVAALANSMCDLRATLKVLEERYHWQRHGLTERLAGQSLRRINTLLDEAYNESLMLNECFKD
complement(57056..57736)           PHAGE_Faecal_FP_Mushu_NC_047913: hypothetical protein; CEP98_00370; phage(gi100026)     1.60e-28            SalmonellaentericasubspentericaserovarTyphimuriumMSRLILGNCVDIMSGFPERAVDFILTDPPYLVGFRDRSGRSIAGDRTDEWLQPACNQMYRVLKKDALLVSFYGWNRVDRFMAAWKSAGFSVVGHLVFTKNYSSKSAYVGYRHECAYVLAKGRPALPQNPLPDVLGWKYSGNRHHPTEKPVTSLQPLIESFTHTNAIVLDPFAGSASTCVAALQAGRRYIGIELMEQYHKAGIERLTAVQRAMQRPAANDVFYPEAA
complement(57881..58069)           hypothetical protein; CEP98_00375                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMSRSSSFFGASAGGAGATLPVVSIPRPAGHGTGDFSAPAGRCRYYAPGTRLLMNALQAAFAA
complement(58118..58474)           hypothetical protein; CEP98_00380                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMDNNSNINDTWLVGLSVDVNGTEMMVHYLVSATDLEHAEAGVLQMGRTWWPSLKREDDRHRWEYETGVVWFNSIILLDDVENSILRGLKFLDAWTVTGSTDAPVLRDEWGNDWRDITR
complement(58467..58937)           hypothetical protein; CEP98_00385                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMFRVTCIDLENGEFALYINGHYLSSEDGSGEKLYLGDILERLSRLPGVTTETVERPVPDSDEWSWNDVADSVFPACITLSRNMTVAAFKQRLSRFPDDALCCGTFWLASDFLALDSSLTEDDIDAAMELAQHCHDANDGFNWSHLQWAIDEVKRGG
59448..59870                       PHAGE_Cronob_ENT39118_NC_019934: protein umuD; CEP98_00390; phage(gi431811072)       5.58e-26            SalmonellaentericasubspentericaserovarTyphimuriumMLLLVAPEQEPVQSTAPLFTERCPAGFPSPAADYTEEELDLNAYCIRRPAATFFVRAIGDSMKEMGLHSGDLMVVDKAEKPMQGDIVIAETDGEFTVKRLQLKPRIALLPINPAYPTLYPEELQIFGVVTAFIHKTRSTD
59870..61144                       PHAGE_Cronob_ENT39118_NC_019934: DNA polymerase; CEP98_00395; phage(gi431811050)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMFALADVNSFYASCEKVFRPDLRDRSVVVLSNNDGCVIARSAEAKKLGIKMGVPWFQLRSAKFPEPVIAFSSNYALYASMSNRVMVHLEELAPRVEQYSIDEMFLDIRGIDSCIDFEDFGRQLREHVRSGTGLTIGVGMGPTKTLAKSAQWASKEWSQFGGVLALTLHNQKRTEKLLSLQPVEEIWGVGRRISKKLNTMGITTALQLARANPTFIRKNFNVVLERTVRELNGESCISLEEAPPPKQQIVCSRSFGERVTTYEAMRQAVCQHAERAAEKLRGERQFCRHIAVFVKTSPFAVTEPYYGNLASEKLLIPTQDTRDIIAAAVRALDRIWVDGHRYAKAGCMLNDFTPTGVSQLNLFDEVQPRERSEQLMQVLDGINHPGKGKIWFAGRGIAPEWQMKRELLSPAYTTRWADIPAAKLT
complement(61226..62203)           PHAGE_Escher_RCS47_NC_042128: portal protein; CEP98_00400; phage(gi100069)           8.52e-111           SalmonellaentericasubspentericaserovarTyphimuriumMMSNERRKTIGRQLNTQASMVEMTDTQRSQVFTLKTGRKITFRFVRVPASDVESKTFVNQETNGRDQLALTRESLKSIIQTIKFQQFFPCIGIQQGERIEILDGSRRRASAIYIRTGLDVMVTNELLSADEARHLAKDIQTAKEHNLREIGLRLMALKESGFNQKEIAELEGLSQAKVTRALQAAAVPQELISLFPVQSELSFSDYKILLEVNEKLSEKGLTSEGLIQSVSDQHDAILSDYERPDDEQKSSILKLISQASQALIAPPPKEKSVISALWTFEEKDKFARKRVKGRTLTYEFSRMSKVVQDELDKAINEVLERNLSQ
complement(62200..63405)           PHAGE_Escher_RCS47_NC_042128: terminase large subunit; CEP98_00405; phage(gi100070)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMENIEQLRKVATRAGKLLTSLSESIRQQKEELKLTEFYQEYSKAALYKLPKLSKGSVEYAVAEMEASGYIFKKKPSGNTMKYAMTIQNVIDLYFHRKVPKYRDRFDKAFTIFVCNLKGGGSKTVSTASLSHAFRAHPQLLFEDLRILAIDFDPQASLTMFLSHENSVGLVENTAAQAMLQNVSREELLSDFIVSSIIPGVDVIPASIDDAFLAEGWKGLCEEHLPGQNIHAVLKENIIDKLRYDYDFIFLDSGPHLDAFLKNCIGAADLMLTPLPPATVDFHSSLKFVASLPALIDSIEQDGHTCNLIGNVGFMSKILNKSDHKICHSQAKEVFGADMLDMVLPRLDGFERCGETFDTVISANPATYDGSTEALKSAKSAAEDFAKAVFDRIEFIRTNGGM
63820..64761                       PROPHAGE_Escher_MG1655: predicted transposase; CEP98_00410; phage(gi16131287)        2.06e-110           SalmonellaentericasubspentericaserovarTyphimuriumMKKKNTTPTPHDATFRQFLTQPDIARDFMELHLPAELRAICDLSTLKLESGSFVEDDLRQYFSDVLYSLKTTAGDGYIHVLVEHQSTPDKHMAFRLIRYAVAAMQRHLEAGHKKLPLVIPVLFYTGKRSPYPYSTRWLDEFDDTALADKLYSSAFPLVDVTVIPDDEIAGHRSMAALTLLQKHIHQRDLAELVDRLAPILLAGYLSSSQVISLVHYIVQAGETSDAEAFVRELAQRVPQHGDALMTIAQQLEQKGIEKGIQLGEQRGIEKGRSEGEREATLKIARTMLQNCIDRNTVMKMTGLTEDDLAQIRH
complement(64793..65359)           DUF2913 domain-containing protein; CEP98_00415                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMTLTEKSGHLAWCALVALALARQDGGVLSPAQENLFLTRWLATALKQRRFSRDVTPDIEWLLKQGRQMGVSAKLASKLNYLWRSCTGELSEQNDLFRLTYALETAKDMHWNYRLLSDREWSGRNAVALSAGVNGIYLSRAKLDVGFNDSGRQINSLTARLTGNVAGVMKLFDRCGWQSLMPPCPTSIR
complement(65416..65751)           hypothetical protein; CEP98_00420                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMENMLKTMREHFPVRTVVIEQSLDMFGVKRNEDGTLLFPRHSDKRFPVARIRKRLAAYGWRGERLNKEVARIVAGPDILPERRDYSIIFPYGWEKKQLTREMRRMFLRKTG
complement(65935..66351)           PHAGE_Vibrio_VP882_NC_009016: putative exonuclease; CEP98_00425; phage(gi126010887)     6.79e-08            SalmonellaentericasubspentericaserovarTyphimuriumMKPAPGAEPVRMYKSPYGGKYGVWRLADCVPMRAKRPQTEKQRLASTRLGLQARMKSERGRFAMLAHTWLALGPVFLDTETTGLDAGAQALEIGLVNARGERIFETRLKPTVGIDPAAAAVQIVTEPYRFPVLSVRLA
complement(66437..67552)           PHAGE_Strept_7201_NC_002185: ORF33; CEP98_00430; phage(gi9634660)                    9.65e-08            SalmonellaentericasubspentericaserovarTyphimuriumMRPATYEPEQIIEAGLALQAEGRNITGFALRNQVGGGNPTRLRQIWDEYQASQSTVVTEPVAELPVEVAEEVKAVSAALSERITQLATELNDKAVRAAERRVAEVTRAAGEQTAQAERELADAAQTVDDLEEKLDELQDRYDSLTLALESERSLRQQHDVEMAQLKERLAAAEENTRQREERYQEQKTVLQDALNAEQAQHKNTREDLQKRLEQISAEANARTEELKSERDKVNTLLTRLESQENALASERQQHLATRETLQQRLEQAIADTQARAGEIALERDRVSSLTARLESQEKASSEQLVRMGSEIASLTERCTQLENQRDDARLETMGEKETVAALRGEAEALKRQNQSLMAALSGNKQTGGQNA
