gi|00000000|ref|CP027414.1|  Salmonella enterica subsp. enterica serovar Typhimurium strain 4822237, gc%: 52.20%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(492212..492559)         PHAGE_Burkho_BcepMu_NC_005882: gp01; CEP98_02940; phage(gi48696911)                  3.52e-30            SalmonellaentericasubspentericaserovarTyphimuriumMIQKSKEMVRLPEIINDLAFHASQVLIESMNIDSASAENAGQAIADRMMRNWGGQSIYFPKGISGRASERDYQIYSECDGRNYAELAKKYNLTLQWIYKIVKRVHTEKQHQRRML
493135..493422                     PHAGE_Burkho_BcepMu_NC_005882: gp21; CEP98_02945; phage(gi48696931)                  5.40e-14            SalmonellaentericasubspentericaserovarTyphimuriumMRKIIVPRLSGWLVASVVLFALIGWTSSAQIPVVIYKLSLVSLSAVLGYWLDRSLFPWARPDSFCPWEESLCCAAAMIRRAIIVAAICLAVALGL
493425..494030                     PHAGE_Pseudo_B3_NC_006548: endolysin; CEP98_02950; phage(gi56692593)                 5.56e-72            SalmonellaentericasubspentericaserovarTyphimuriumMRYQYVCLVCAMTFLSADAAEPPRASLQWRNEVIRTAREIWGLNAPVADFAGQLHQESGWAPDALSPAGAQGMAQFMPATAKWVSQLYPELHENKPFNPAWAIRALVQYDRQLWKSVLAKNSCQRMAFTLSAYNGGQDWVNRDKKLAAAKGLDASIWFEHVERVNAGRSAANWRENRHYPKAILYQHAPRYLQWGQASCIH
494043..494357                     PHAGE_Burkho_BcepMu_NC_005882: gp25; CEP98_02955; phage(gi48696935)                  2.19e-29            SalmonellaentericasubspentericaserovarTyphimuriumMKLSIDFWEVISLLLSFVGLMFAAGKLLLAQIEKRLNERFEALEAARRESEAGWSRLEREFLEFRADLPLHYVRREDYLRGQAVLEAKLDALYSKIELIQRGNH
494517..494972                     PHAGE_Burkho_BcepMu_NC_005882: gp37; CEP98_02960; phage(gi48696947)                  4.28e-15            SalmonellaentericasubspentericaserovarTyphimuriumMETLSVIHTVANRLRELNPDMDIHISSTDAKVYIPTGQQVTVLIHYCGSVFAEPENTDATVQKQLIRISATVIVPQISDAINALDRLRRSLGGIELPDCDRPLWLESEKYIGDAANFCRYALDMTASTLFIAEQESKDSPLLTIVNYEEIQ
494969..495166                     PHAGE_Burkho_BcepMu_NC_005882: gp38; CEP98_02965; phage(gi48696948)                  3.53e-11            SalmonellaentericasubspentericaserovarTyphimuriumMKYIYSGPASGVTLADGQEVLLWPNSEISLPEDNEWVITMIARRHLVPVVTQEVETNEEEIVHGS
495156..496583                     PHAGE_Burkho_BcepMu_NC_005882: major tail sheath protein; CEP98_02970; phage(gi48696949)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMAANYLHGVETIEIETGPRPVKAVKSAVIGLIGTAPCGPVNQPTLCLSESDAAQFGPGLANFTIPQALKAIYDHGAGTVVVINVLNPAVHKSTIPSETVKVDDNGQIQLKHGAVQTMNIGRSTNAGNAYIKGTDYTIDMLTGKITCMGTNLKPGVQAYVNYTYADPTKVTAADIVGAVNTAGDRTGMKLLQDTWNQFGFYAKILIAPVFCTQNSVAVKLIAQAEALGAITYIDAPIGTTFQQVLAGRGPQGAINFNTSSDRARLCYPHVKVYDSATNSEVLEPLSSRAAGLRAKVDLEKGFWWSNSNQEIQGITGVERSLSAMIDDPQTEVNQLNENGITTIFNSYGSGLRLWGNRTAAWPTVTHMRNFENVRRTGDVINESIRYFSQQYMDMPINQALIDALTESVNTWGRKLIADGALLGFECWYDPARNEQTELAAGHLLLSYKFTPPPPLERLTFETEITSEYLVSLESNR
496583..497107                     PHAGE_Burkho_BcepMu_NC_005882: gp40; CEP98_02975; phage(gi48696950)                  8.93e-90            SalmonellaentericasubspentericaserovarTyphimuriumMAGKIQINRITNANIYLDGNNLLGRASEIKLPDISMIMQEHKALGMVGKIELPAGFDKLEGEIKWNSFYHDVMRKTANPWQAVALQCRSSIDCYNSQGKADQLALVTHMTVMFKKNPLGTFKQNENPEFSSAFGCTYIKQVVDGETLLELDYLANIFRVNGADQLNAYRNNIGG
497159..497476                     PHAGE_Burkho_BcepMu_NC_005882: gp41; CEP98_02980; phage(gi48696951)                  2.65e-10            SalmonellaentericasubspentericaserovarTyphimuriumMNEKYTLQFPFTSAAGERIDVLQLRRLKVKDMRAARRASDKPEEWDEPLMAAMTGLVTEDLAEMDLLDYQALQKRFQSMLSMATEPTATVAGNGAAGEVVSLSAQ
497436..497564                     GpE family phage tail protein; CEP98_02985                                           N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMALLARWFRFPPSEIDALSVDDFTCWLDEASAQIKHEYDSQA
497661..500015                     PHAGE_Burkho_BcepMu_NC_005882: gp44; CEP98_02990; phage(gi48696954)                  1.04e-60            SalmonellaentericasubspentericaserovarTyphimuriumMANDIITQLQARNETLTQAIARYGSLNASTLHTLSFEQTKVTRLTQQLANSALRREENDKQRAGLLEKTQTFAGQLGKLLNVETPDWKLPYEFQGNMVDMAAKGGMDNTARDALSLNIRDWSLDFNQDQKDLQSTAATMIEGGVSALQDLSRYMPDIAKAATASRDSAQSWAQAALATRDKLNIAPDDFRFAQNMLYSVAKSGGGSVAEQTQWINAFAGKTGAQGKEGIAELTATMQIAMKNAPDAGAAAANFDHFLKSAFSKETDSWFARQGVDLQGSLLEHQQNGIGVTEAMTHIVQMQLEKMNPQILDTFRQTMKIEDLSARGDALQAMVEKFNLGAMFGDAQTRDFLAPMLANMDEYRQLKASAMQAAGQHVIDDDFAAKMTSPGEQTKALQLSLNDLWLTVGLELMPAIGELAQSITPLVRQFSAWLRENPALVQGVAKVVSVIWLFNGALNILRLGANLIASPFIRLIDIFLKVKAGLALGGGSRALSVLKSFGNGAKSLTMLLGNGLIKGLRLVGQTFIWLGRALLMNPVGLTITAIASAAYLLYRYWEPISGFFAGVWERIKTAFDGGIAGVTRLILDWSPLGLFYRAFAGVLDWFGIELPASFSEFGGNILDSLINGILNALPFLSGAIEKIKALIPDWAKSALGISAEMPSVAAAVPGIAGTMVAQQASAPLASGAKAVTTSAKTMASPQPVKTKSAATPPTPAALPGKSGGKPYTLPSRAQSNVQVHFSPQVTVQGSGANAAKDINNVLSLSKRELERMINDVMAQQRRREYA
500015..500968                     PHAGE_Burkho_BcepMu_NC_005882: gp45; CEP98_02995; phage(gi48696955)                  6.94e-50            SalmonellaentericasubspentericaserovarTyphimuriumMYAVLGEIEFDVVAYWDEFESTMGVDYTSHARIEGKPGVQFIGDKLDKITLKFNFHSQYCQPTTELNRLREAMTAHQAMALVFGNGDYRGWFVITDLTATHQHTDPYGNVIAQGGSLSLQEYTGDPKSPLLPPAITTQEPNIDEMLDELPDVNDSWFDELLSVVEEGMREAKEMMDEVADAIDDIKKTIAQAKELVKEAKALKEKCGDIVDSLKKTMSSIDALFQQPLDLQTLAGLPKALAAKMQELIDSLPGIRECAGDAGTLIEHAESLFDAITSSVAEATYDSAATLVNQARGTLQTSAPDVSQLAAADITRSL
500968..501177                     PHAGE_Burkho_BcepMu_NC_005882: gp46; CEP98_03000; phage(gi48696956)                  9.66e-23            SalmonellaentericasubspentericaserovarTyphimuriumMRYLEHVTTDGERWDNLAWRYYGDALAYERIIAANPHVAIMPVLPSGVRLIIPVISVTQTTPELPPWLR
501165..502208                     PHAGE_Burkho_BcepMu_NC_005882: tail protein; CEP98_03005; phage(gi48696957)          2.84e-101           SalmonellaentericasubspentericaserovarTyphimuriumMAEITVSGGVFATLTPIFTLWYGHKEITYDIAPYVTSISYSDSIKNESDVIAIALEDSTGRWVNEWYPGKGDTLALRLGYQGEDLLDCGIYVIDKIDISAPPSTVNIDGIATSVSKALRTKNSQGFEETTLSAIASRIAQKHGLTLAGKIAPLTIDRVTQYAETDVAFLKRLASEYGYTVKVTATELIFSHLPTLRCLAPVKTLRRTDVSHYTFKDTINRIYKNATVQHQNSKQKELVIYTHDSQEKTSARGAATSADTLKINSRAPDTGAAQAKANAALDSHNEYQQTGTLSLMGCPQLTAGNKIELSDFGVLSGQWLIDKSMHKLTRSGGYTTEIDISRGPATSQ
502218..502940                     PHAGE_Burkho_BcepMu_NC_005882: gp48; CEP98_03010; phage(gi48696958)                  4.57e-38            SalmonellaentericasubspentericaserovarTyphimuriumMKGVTRQTGIISDIDEAVVRVRVTLPECDNLRSNWLAVLQRNTQDNKDYWLPDIGEQVEVSLDDNGEDGVVLGAVYSSVDTAPLASRDKRYVQFSDGAAFEYDRALHQLTVNGGIEKIVIEVKEHTQLTSPQVEVRAQHVTVISETVDVAATSVGVKAVDVNVEAPHTGIKALNVTVDAPLSTFTGDVTVMKKLTWLGGMAGSGGVGNSAVITGNVNVLGNVNASGTLMDNGGNSNHHSH
503268..503630                     PHAGE_Entero_SfV_NC_003444: putative flippase; CEP98_03015; phage(gi19549013)        3.71e-59            SalmonellaentericasubspentericaserovarTyphimuriumMIKLFIKYVSIGVLNTALHWAIFALCVYGFQTSQALANVAGFAVAVSFSFFANARFTFGASVSTGRYLLYVGFMGVLSAVVGWTGDKCAMPPIFTLIVFSAISLICGFLYSRFIVFRNEK
503627..504556                     PHAGE_Entero_SfV_NC_003444: bactoprenol glucosyltransferase; CEP98_03020; phage(gi19549012)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMKISLVVPVFNEEDAIPIFYKTVREYSSLKPYNVEIIFVNDGSHDATESIISALAVADPLVVPISFTRNFGKEPALFAGLDHATGDVVIPIDVDLQDPIEVIPHLINKWQAGAEMVLAKRIDRSTDGHLKRKSAEWFYRLHNKISTPKIEENVGDFRLMSREIVENIKLLPERNLFMKGILSWVGGQTDVVEYARAERVAGNSKFNGWKLWNLALEGITSFSTFPLRIWMYIGVSVSALSLIYAMWMIIDKLMWGNPVPGYPSLMTAILFLGGIQLIGIGIMGEYIGRVYTEVKQRPRYIVKNKKTMME
504556..506103                     PHAGE_Salmon_epsilon34_NC_011976: GtrC; putative membrane protein; CEP98_03025; phage(gi221328637)     1.05e-61            SalmonellaentericasubspentericaserovarTyphimuriumMNTMLKILPKTAMILLAFLAIFLIEWYTPIHSDDYRYYLLGISPESHFHHYMTWSGRIIADYTSALILYTRSQLVYSISAAVSTLVFCYFIVKTPSGTLRWNKSDYLLFPLIFFTYWISNPNLGQTTFWIVGAANYLWTNLFVVAWLFFFYTITIKNSKAISPWVALLSFMAGCSNESVSPFVSLISVLAIAYELWQNKSVSRNKIVYSLCAIAGSCVLILSPGNFIRASGKEFWYGRPIFERIFIHLTERVHNHLALIWIAYVVLLLLVLLVIFNKQIRAKIDKTSLICAALVVCIGIGTSLIMFASPSYPDRVMNGTFMFFLLAISFIAYALLKSGVKAGVVGVTAVTVLCGIVFLWSYSLMLNGYKKTAGQEIVRQKIITKEIAAGKQKFIIPDYYFVKLQNSGGHFGLFHDPAVYGEYYHVQAIFKKKVNFDYSVIANGAKHSLSNETTAYSNTRGDFAIISREQLTGSITLSVNGRQKTIPVEKMKHAEINDEFWYYASVDKGEITAISF
506267..506626                     PHAGE_Burkho_BcepMu_NC_005882: gp49; CEP98_03030; phage(gi48696959)                  5.02e-43            SalmonellaentericasubspentericaserovarTyphimuriumMNTKTRPSTLHWQPALQRPEEYVCGLDDIHQAIHIILRTPRGSDPHRPLFGSNLWRYIDYPIERAIPHVVRESVEAIRMWEPRCRLLKVTPTIDGEHLTLRVQWRAADGVINSTEVLWR
506617..507732                     PHAGE_Burkho_BcepMu_NC_005882: gp50; CEP98_03035; phage(gi48696960)                  3.60e-132           SalmonellaentericasubspentericaserovarTyphimuriumMAIAEPDFIDRDPAQITSEMIAQYEEASGKKLYPAQAERLLIDLFAYRENLVRIAIQEAAKQNLVAYSRAPMLDYLGELVGVHRLPAQAAKTTLQFSVTQAAKSNLVIPQGTRASASDSVMFATDEDVLLPAGSLSVAVTATCVVTGEPGNNWQPAQISALVDRVGNYDISVTNLTASSGGCGEENDDALRKRIQLAPESFSNAGSYGAYRFHTLSVSQSIIDVAVLGPDEGLAEGCVELYPLTLNGLPGPELLAQIEREVSKEKKRPLTDKVSAKCSPRVAYQISARLTLFTTADQETTLAAAREAINTWTRSRQTRLGQDIVPNQIIKVLQVDGVYDVALDMPAKKVLQAHEWAECTAIDVTIAGVSDG
507725..508357                     PHAGE_Burkho_BcepMu_NC_005882: gp51; CEP98_03040; phage(gi48696961)                  8.06e-32            SalmonellaentericasubspentericaserovarTyphimuriumMDKLLLPPPLASDERFSILANIAAERFAQIDLTALLVYLVDIVDASALPSLAEQFHVQGLEGWLFAANEQEKRELIKQAIELHKYKGTPWAVRRVLEILSLPGTISEWFEYGGKAYFFKVEIKLINQGMDENLFNNLVDLIHEYKNVRSKLEALIVWIINQSAIPVIGSALYGGEITTVLPFQVLEVQQTKPIYFGTGQWSLEITSIYPE
508360..510105                     PHAGE_Escher_520873_NC_049344: holin; CEP98_03045; phage(gi100034)                   3.62e-85            SalmonellaentericasubspentericaserovarTyphimuriumMDNEFYTLLTDRGMAKIASALADKKQLHLQKMAVGDGGGQYYEPIASQTKLRHEVWRGEMNTLTVAPNNPNWLIAELVLPEDVGGWYVREVGVFDDEGELIAIGKFPESYKPLLPGGCGKQVCIRLIMEVSNTTAVTLTVDPSIVLATRDYVDTRLDEHEHSTNHPDATLTQKGFTQLSNATDSDDETKAATPKAVKAAMAEARNHTHTWNQITGVPDGTLTQKGIVKLNSATDSTSTTEAATPSAVKAAMDKANAAAPANHTHVWNQVTGVPDGTLAQKGIVKLNNATDSTSTTEAATPSAVKAAMDKASAAAPARHTHAWGQITGAPDGTLTQKGIVKLNNATDSTSTTEAATPSAVKAAYDKASAAAPANHSHYQFFTANGTFTVPDGVTQVFVEMLGGGGGGGGGGHTSNTDGLLYCSGGNAGKSGEPEIAIVPVIAGNNYPVTVGAGGASGAGGVLPNSNPTGNVVQVGQAGNSGINGGNSIFIDVVANGGAGGAGGIVQSRIPLSGFNQLDSISGGNAETTFFGKGGTGAVLSNGSNASGYGAGGGGGASVNSLNIALSGYAGGRGSSGFVKISW
510110..510715                     DUF4376 domain-containing protein; CEP98_03050                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMTQYAYYHPATFEVIDWIDTSSLNVVLPDSVISIDDEQWRLRDKNCWVCLNPLEFITTPPPGKFYRLQGNEWVYDEALFVSALESVKAQVIQAIKAHRDDVTADYIVIDGNHFHSDANSRIQQMSLTRMGQAQQIPAGLMWQAKNNGLIELTNDIAAQFETVTMDHDMRLFANAQRHIAAVEALEDIEAVLDYDYSTGWQP
510712..511167                     PHAGE_Haemop_SuMu_NC_019455: enoyl-CoA hydratase/carnithine racemase-like protein; CEP98_03055; phage(gi418489075)     3.28e-28            SalmonellaentericasubspentericaserovarTyphimuriumMSQTTVWLACYKGRSEHRGIARFADWLTRKVTRGIYSHCELAVAHGGNEYLCYSASFRDRGVRGKIIPLPDDKWDKLPLKATLPEVEVFFRKHNGKRYDWQGALGIALYNRERKDRLFCSEFCAEFLGLNDSWRYSPSHLYALVSSWQYDC
511416..511706                     hypothetical protein; CEP98_03060                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMDYGNTGDMRLFAVMNFYYIDYLCRPITIAVVIFLFWWRLANEMYIYGSKKQKKTGLWINRKLNSKFGIDIELGAVKRGNKITPIPTLILYIPMKI
511903..512631                     PHAGE_Salmon_SJ46_NC_031129: nicotinamide mononucleotide transporter; CEP98_03065; phage(gi100101)     9.50e-39            SalmonellaentericasubspentericaserovarTyphimuriumMIIVSVLRQSKDFTTKHAQWLHKQLKGYDSVCLTDALKIKGVNTAPLLYDWPGWWAKLELFNPLHPVLGNEDILYIDIDSVIVGDITPLTTMKKITLLNDFSQHGASVAPATGIMFIPAPAKKNVWDEFMKNPEKEINAIRTPPYHGDQGFIGRICQDAERWQNILPGRIISYKANIATPKMIGFNPELYDGTGNGKLPDGASIVCFHGSPRPWNTALPWVPYFSLKNTIQSKVKQYKLSLR

#### region 2 ####
2043972..2043983                   attL                                                                                 N/A                 CCGGTAGTGCGT
complement(2044352..2045597)       PROPHAGE_Entero_Fels-2: integrase-like protein; CEP98_10835; phage(gi16766052)       0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMPNQLKPLTNVEIAGAKPRSTDYELRDGEGLYLLVKTSGRKAWHFEYYHPVTKKRTKTSLGPYPVVTLAMARETRTKYRRLLYQGIDPRQHLAGIAEEKRIQNECTLEKVAEQWLKEKKRTSDLSEDHAKDVWRSLEMHVFPSLGNTPVTEIRPKMLKEHLTPLEEQGILETLRRVISRLNEIFRFAISEELIEFNPADNLVARFKKPKKQNMPALHPSELGRLMLALQNASIRKETRCLIEWELLTWVRPGEAVSARWCDIDMKKAEWRIPDTFMKMNRSHTVPLSKQALRVLQIMEPVSRHRPWVFPSIRKPLEHMHQQTANAALIRMGFGGELVAHGMRSRQDRRRRSFSPSPGICAGTPERRRDRSGLQPQRLSGTKATADAVVGKLRCRQTAGAARCRRTAANRGRRIA
complement(2045764..2046126)       tRNA                                                                                 N/A                 GGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGTGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAAATAGTCGCAAACGACGAAACCTACGCTTTAGCAGCTTAATAACCTGCTTAGAGCCCTCTCTCCCTAGCCTCCGCTCTTAGGACGGGGATCAAGAGAGGTCAAACCCAAAAGAGATCGCGCGGATGCCCTGCCTGGGGTTGAAGCGTTAAAACGAATCAGGCTAGTCTGGTAGTGGCGTGTCCGTCCGCAGGTGCCAGGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAGGATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCA
complement(2046198..2047361)       HlyD family type I secretion periplasmic adaptor subunit; CEP98_10845                N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMDDPDIQRERAFSGAGRIVLICSLLFLILGIWAWFGRLDEVSTGNGKVIPSSREQVLQSLDGGILAQLTVREGDRVQANQIVARLDPTRLASNVGESAAKYRASLASSARLTAEVNDLPLAFPAELNGWPDLIAAETRLYKSRRAQLADTEAELRDALASVNKELAITQRLEKSGAASHVEVLRLQRQKSDLGLKITDLRSQYYVQAREALSKANAEVDMLSAILKGREDSVTRLTVRSPVRGIVKNIQVTTIGGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYDYAIYGGLDGVVETISPDTIQDKVKPEIFYYRVFIRTHQDYLQNKSGRRFSIVPGMIATVDIKTGEKTIVDYLIKPFNRAKEALRER
complement(2047369..2049549)       PHAGE_Bacill_SPbeta_NC_001884: ABC transporter; CEP98_10850; phage(gi9630145)        9.74e-25            SalmonellaentericasubspentericaserovarTyphimuriumMTRAAPDVEEVLSERALSQWAQAISYVAGHYRVACSPGSIQANAPWLRGKSRTTALTQLARQAGLSFHAPDIDKTAFSQWRLPLVVELRDGQLLVIEHVNGEEAVDVFVIEEEGQRNRLTLSELLPEILYVAALRPLSALKDSRVDRYISRFKPDWMRELVLQDIRPYLPVMVAAFLINVLSLAGIVFSMQVYDRVIPAQSYPTLYVLSFGVLVAVLFGFLLREARTHIMDVLGKRADMRISDRVFGHALRLRNSAIPRSTGSFISQLRELEQIREMITSSTLATIVDLPFFFLFMIVLAIIAPPLAWIAPVAALLMILPGVALQKKLAVLANQAAHEATLRNAVLVESVQGLEDIKLMQAENRFLQQWNSYIRITGESGLRTRKLTQGLISWGMSVQSLVYAAVIMFGAPMVIEGSMTTGAVVAASMLGSRMIAPMANLCGVLARWQQVKAAKMGLDNIMQLPTETQHDDSLIHRDILHGHYLFENAQFRYHNDDQRIPLRLVRLEIMPGERIAILGRNGAGKSTLLQAMAGGLEMIQGDARLDNLSLSHIDMADLRRNIGFLSQNARLFFGTLRENLTLGAPHANDEQIFDALEVSGGAVFVRRLAKGLDHPIMEGGNGLSGGQRQSLLLARMLLRSPNIVLLDEPSASLDEHTEREFIQRLHQWLGNRTLVVATHRVPILELVERVVVLKEGQLVMDAPKAQALNADRMQSHRREWKNENQSA
complement(2049546..2050955)       type I secretion protein TolC; CEP98_10855                                           N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMGRVAPVAIVLAFALFHHQPRGAEAPPMITSEGLATDQMLPSLDGSAAELPLSAAAPGNLTLNDAVNRAVNWHPSIREAIGKLLAQNEQIEVAKSKYYPQVSAGVNNGYSNTYTDHGYSPSLVLSVSQMLYDFGKVASQVRAETAGAAQQQANVLLSIDTVAHETANAIVQTQSWQQMVEAAEEQLVALDSIGKLIRQRSDEGATSLSDVVQTEARIESARSQLAQYQANLDSAKASLMSWLGWNSLNGINNDFPAKLARSCETATPDDRLVPAVLAAWAQANVARANLDYASAQMTPTISLEPSVQHYLNDKYPSHEVLDKTQYSTWVKVEMPLYQGGGLTARRNAASHAVDAAQSTIQRTRLDVRQKLMEARSQAMSLASALQILRRQQQLSERTRELYQQQYLDLGSRPLLDVLNAEQEVYQARFAELQTESQLHQLQLNCLYNTGALRQAFALNHRSIQSVEIQP
complement(2051020..2062494)       PHAGE_Acinet_vB_AbaM_ME3_NC_041884: hypothetical protein; CEP98_10860; phage(gi100051)     2.37e-10            SalmonellaentericasubspentericaserovarTyphimuriumMRLLAVVSKLTGVSTTVESSAVTLNAPSIVKLSVAREEISQLTRINQDLVVRLHSGETITIKNFYVTNDLGASQLVLAENDGTLWWVENPQAGLHFEQIADINELLVTSGASHEAGGAVWPWVLAGAVAAGGIAAIASSGGGDSHHHSDGDNPPPDNTNPDGNPPDNSNPGGSTPNGNTPGSSNPVDTTPPLAPGELLISADGKTVSGQAEAGSTITIKDPSGNVVGEGKADSDGKFSIDLTAPQISGEQLTVTATDDAGNTGPSATIDAPNIPLPDTPVITAAIDDAAPLTGTLSNNQFTNDNTPTLEGTGSAGTVIHIYANGQEIGSTTVDTSGNWHFAITSALADGENHFTAIATNVKGESSESARFTLTIDTLIPDAPRVELIADNTSLLTGPLQNNDRTDEAKPLFSGQGDAGNTITIKEGSTVIGSATVDENGRWTFTPTTPLSDGEHTFTVEQSDKAGNTSRVTTTPTIIVDTTPPDAAIIDNVAKDGTTVSGTAEAGSTVSIYDPAGNYLGSTITGENNHFSITLNPAQTHGERLEARIQDAVGNIGPATEFTASDSQYPAQPTILTVTDDAGAVTGLLKNGDATDDNRPTLSGTAEPGSTISINDNGFPVATFPPIVADADGKWSFTPSLALADGDHVFTATATNDRGTSGQSVSFTIDIDTQPPVLEGLAVSDVGDRLTGTTEAGSTVVIKDSLGNTLGSGTAGDDGTFSIGISPAKINGETLSISVTDKAANSGPVETLNAPDKTAPAAPDGLTVATDGLSVSGQAEAGATVTIRDSSNTVLGSAVANGNGQFIVPLNTAQTNGQALIATATDVAKNESAAATVIAPDSTAPEMPKNVVISEDGTSISGTAEPGSAITIATPDGKPLGSGKADGEGHFTLPLVPAQTNGEQVTVTATDSANNVSPPTTAQAPDITAPDKPIITQVLDDVESFTGPLVNGQTTNDNRPTLSGTAEAGARVEVFDNGFSLGLATLQPNGAWTFTPSQNLGEGAHRLTVIATDAKGNASQAASFDLVVDTQSPQQPVITFITDDAPGILGSVAHLGLTNDSTPTINGTGEPGSTVHLYQNGARIADIIVGNSGVWSYAYTTASPLADDTYTFTVTASDSNGNTTPFSTDFTITIDTQAPAAPGVIGVADGDGNTIDTNQITQESQPRLSGSGTAGDTIILYDNGNAIGQALVGTDGRWQFTPPAALGDGDHLLTARANDPAGNESPESISFTLRIDTQAPDAPQIVSAAITGGEGEVLLANGSITNQRMPTLSGTGEPGTIITLYNNGVELATVQVNPQGSWTYPLTRNLSEGLNILTATATDAAGNSSPTSGVFSVTLDTQPPAQPDAPLISDNVAPVIGNIGNNGATNDTTPTFSGTGEIGSTIILYNNGSEIGRTTVGDNGSWNFTPAALTPETYTITVTETDRAGNISPPSASVTFTLDTTAPANPVITFAEDNVGEVQDTIVSGATTDDNTPVIHGTGDIGSIITLYNGSSVLGVVTVDETGTWTLPVTSALPDGVYTLTAIAADAAGNSSGVSNSFTFTVDTVPLQPPVVNEILDDVAPVTGPLTDGAFTNDRTLTINGSGENGSTVTIYDNGVAIGTALVTDGVWTFNTPELSEASHALTFSATDDAGNTTAQTQPITITVDITAPPAPTVQTVDDDGTRVAGIADPYATVEIHHIDGTLVGSAVANGTGEFVVTLSPAQTDGGTLTAIAIDRAGNNGPATNFPASDSGLPAVPAITAIEDDVGSVQGNIAAGGATDDTTPTLRGTTDIGSTVEVFIDGDSAGFATVDASGNWIFEIATPLSESTHYFTVQATNANGPGGLSAPVGITVDLSAPAQPVITSATDDVPGMTGTLDNGALTNDSRPTLNGTGEAGATIRILDNGVEIGSATVDQSGNWRFTPNAPLESNAHIFTAVATDPAGNSGQPSDGFTLNIDAQAPDVPVITSVIDDNNQPTVPVLPGQSTDDRQPILNGTGEPGATITIFDNGTPLGTAQVGENGSWTFPVPRNLSEGSHNLTVSATDPAGNTSAVSAPWTIVVDITPPAIPVLTSVVDDQPGITGNLVSGQLTNDATPTLNGRGEAGATINVYLDGNPASIGTTTVNSDGTWSFTPQTPLANGSHTFTLSATDPAGNSSAVSSGFVLTIDATPPAAPVIASVADNTAPVTGIVPNGGSTNETRPTLSGTGEAGTTISIYNGSALVGTAQVQANGSWSFTPSTSLGAGVWNLTATATDAAGNTSAASEIRSFTIDTTAPAAPVIDTVYDGTGPITGNLSSGQITDEARPVISGTRETNTTIRLYDNGTLLAEIPADNSSSWRYTPDASLATGNHVITVIAVDAAGNASPVSDSVNFVVDTTPPLTPVITSVSDDQAPGLGTIANGQNTNDPTPTFSGTAEAGATITLYENGTVIGTTTAQPDGAWSVSTSTLASGTHVITAVATDAAGNSSPNSTAFTLTVDTTAPQTPILTSVVDDVAGGVTGNLANGQITNDNRPTLNGTAEAGSVVSIYDGDTLLGVTSANASGAWSFTPTTGLNDGTRTLTVTATDPAGNVSPATSGFTIVVDTLAPTVPLITSIVDDVPNNTGAIGNGQSTNDTQPTLNGTAEANSAVSIFDNGALVATVNANASGNWSWTPTAALGQGSHAYSVSAADAAGNVSAASPSITIIVDTIAPGAPGNLVINATGNRVTGTAEAGSTVTITSETGVVLGTATADGTGSFTATLTPAQTNGQPLLAFAQDKAGNTGIAAGFTAPDTRVPEAPIITNVVDDVGIYTGAIANGQVTNDAQPTLNGTAQAGATVSIYNNGALLGTTTANASGNWSFTPTGNLTEGSHAFTATATNANGTGSVSTAATVIVDTLAPGTPSGTLSADGGSLSGLAEANSTVTVTLTGGVTLTTTAGSNGAWSLTLPTKQIEGQLINVTATDAAGNASGTLGITAPVLPLAARDNITSLDLTSTAVTSTQNYSDYGLLLVGALGNVASVLGNDTAQVEFTIAEGGTGDVTIDAAATGIVLSLLSTQEIVVQRYDTSLGAWTTIVNTALGDFANLLTLTGSGVTLNLSGLGEGQYRVLTYNTSLLATGSYTSLDVDVHQTSAGIISGPTISTGNVMADDTAPTGTTVTAITNANGVSTPVGAGGVDILGQYGTLHINQDGSYTYTLTKPTAGYGHKESFTYTITQNGVGSSAAQLVINLGPAPVPGSVIATDNNASLVFDTHVSYVNNGPSTQSGVTVLSVGLGNVLNANLLDDMTNPIIFNVEEGATRTMTLQGTVGGVSLVSTFDLYVYRFNDAIQQYEQFRVQKGWINTLLLAGQSQPLTLTLPGGEYLFVLNTASGISVLTGYTLAISQDHTYAVDSITANTTGNVLTNDVVPTDALLTEVNGVAIAATGTTEVNGLYGSLIIDARGNYTYTLKNGVGADSIKTPDSFIYTVKAPNGDTDTASLNITPTARALDAINDVSDTLSVATLQDTAAWLDSSVGSASWGLLGKSGSGSGTFDVATGTVLKGASLVFDVSTLITLGNLNISWAIQENGTVIRNGTVPVANITLGSATVTVNLSGLELDAGTYTLNFTGTNTLAGAATITPRVIGTTVDLDNFETSGTHTVLGNIFDGSDAAGAMDQLNTVNTRLSISGYNGSAATLDAAANTTSATIQGHYGTLQINLDGAYTYTLNNGVAMSSITSKEVFTYQLDDKMGHTDSATLTIDMAPQIVSTNQNDVLIGSAYGDTLIYHLLNGADATGGNGVDRWQNFSTAQGDKIDIHELLTGWDHQAATLGNFVQVHTSGANTVISVDRDGTGSAFKSTDLVTLENVQLTLNDLLQNNHLITSG
complement(2063108..2063590)       PHAGE_Escher_500465_1_NC_049342: HNH endonuclease; CEP98_10865; phage(gi100046)      1.78e-110           SalmonellaentericasubspentericaserovarTyphimuriumMTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANIGDSYVILKDGEAWLFGANFTPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRINREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRSDLKEREWQLDKARIMKNAGR
2063740..2064216                   PHAGE_Escher_500465_1_NC_049342: primase; CEP98_10870; phage(gi100047)               1.99e-102           SalmonellaentericasubspentericaserovarTyphimuriumMVLFTRFMLMGIAMPQISRTALVPYSAEQMYQLVNDVQSYPQFLPGCVGSRVLESSPAQMTAAVDVSKAGISKTFTTRNQLTRNQSILMHLVDGPFKKLIGGWKFTPLSPEACRIEFQLDFEFTNKLIELAFGRIFKELASNMVQAFTVRAKEVYRAG
2064206..2064496                   PHAGE_Escher_500465_1_NC_049342: exonuclease; CEP98_10875; phage(gi100048)           7.89e-55            SalmonellaentericasubspentericaserovarTyphimuriumMPDKLVVEVAYALPEKQYLQRVTLEEGATVEEAIRASGLLELRTDIDLAKNKVGIYSRPVKLTDTVQDGDRVEIYRPLIADPKALRRQRAEKSAGR
complement(2064662..2065000)       PHAGE_Escher_500465_1_NC_049342: recombination protein; CEP98_10880; phage(gi100049)     1.88e-73            SalmonellaentericasubspentericaserovarTyphimuriumMRCKTLTAAAAVLLMLTAGCSTLERVVYRPDINQGNYLTPTDVAKVRVGMTQQQVAYALGTPMMTDPFGTNTWFYVFRQQPGHENVTQQTLTLTFNSSGVLTNIDNKPALTK
complement(2065149..2066810)       PHAGE_Escher_500465_1_NC_049342: putative single-stranded DNA binding protein; CEP98_10885; phage(gi100050)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMLAQLTISNFAIVRELEIDFQSGMTVITGETGAGKSIAIDALGLCLGGRAEADMVRTGATRADLCARFALKDTPAALRWLEENQLEEGRECLLRRVISSDGRSRGFINGTAVPLSQLRELGQLLIQIHGQHAHQQLTKPEQQKSLLDSYANEAALAQQMAARYQLWHQSCRDLAHHQQQSQERAARAELLQYQLKELNDFNPQAGEFEQIDEEYKRLANSGQLLTTSQNALALLADGEDVNLQSQLYSAKQLVSELVGMDSKLSGILDMLEEATIQLTEASDELRHYCERLDLDPNRLFELEQRIAKQISLARKHHVSPEALPQLYQSLLEEQQQLDDQADSLETLTLAVNKHHQQALETAQALHQQRQFYAQELGQLITESMHLLSMPHGLFTIDVKFDEHHLSNDGADRVEFKVTTNPGQPLQPIAKVASGGELSRIALAIQVITARKMETPALIFDEVDVGISGPTAAVVGKLLRQLGESTQVMCVTHLPQVAGCGHQHFFVSKETDGAMTETHMQPLDKRARLQELARLLGGSEVTRNTLANAKELLAA
complement(2066896..2067774)       PHAGE_Escher_500465_1_NC_049342: hypothetical protein; CEP98_10890; phage(gi100051)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMNNHFKCIGIVGHPRHPTALTTHEMLYRWLCDQGYEVIVEQQIAHELQLKNVPTGTLAEIGQQADLAVVVGGDGNMLGAARTLARYDINVIGINRGNLGFLTDLDPDNALQQLSDVLEGRYISEKRFLLEAQVCQQDRQKRISTAINEVVLHPGKVAHMIEFEVYIDETFAFSQRSDGLIISTPTGSTAYSLSAGGPILTPSLDAITLVPMFPHTLSARPLVINSSSTIRLRFSHRRSDLEISCDSQIALPIQEGEDVLIRRCDYHLNLIHPKDYSYFNTLSTKLGWSKKLF
2067706..2067900                   molecular chaperone GrpE; CEP98_10895                                                N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMCRECGGMTRMPHNADTLEMIIHFSEVLVAKIDDNVSTSLETLNLIPIISEVSEMNAKKTRRNS
2067897..2068487                   PHAGE_Escher_500465_1_NC_049342: tail assembly protein; CEP98_10900; phage(gi100053)     1.76e-53            SalmonellaentericasubspentericaserovarTyphimuriumMSSKEQKTPEGQAPEEIIMDQHEEVEAVEPNDSAEQVDPRDEKIANLEVQLAEAQTRERDTVLRIKAEMENLRRRTEQDIEKAHKFALEKFVNELLPVIDSLDRALEVADKANPDMAAMVEGIELTLKSMLDVVRKFGVEVIAETNVPLDPNVHQAIAMVESEEVPAGNVLGIMQKGYTLNGRTIRAAMVTVAKAK
complement(2068522..2069127)       cytoplasmic protein; CEP98_10905                                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMSEDYVIEWDKNFADDLNVVANVFLSHNPTLWPTIFSQLSTQPEIFEDEDEDEYGLQDVLDCSGGDLGNNELAQAFLQVLRGEGFIHLVDWKGEDEEGELANFAADRFYELTKNLTDSEELRNLLVEITQEDEISDVCEAGDRYLDEIFERIQTELNKRGFQIFDLNEGSDTYNVVVLPMSEYKKIEDFNTPWLEVQDFLS
complement(2069248..2070489)       PHAGE_Escher_500465_1_NC_049342: minor tail protein; CEP98_10910; phage(gi100055)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMVVISAYFSGSETGMMTLNRYRLRHMAKQGNRSAKRVEKLLRKPDRLISLVLIGNNLVNILASALGTIVGMRLYGDAGVAIATGVLTFVVLVFAEVLPKTIAALYPEKVAYPSSFLLAPLQILMMPLVWLLNTITRLLMRLMGIKTDIVVSGSLSKEELRTIVHESRSQISRRNQDMLLSVLDLEKVSVDDIMVPRNEIIGIDINDDWKSIERQLTHSPHGRIVLYRDSLDDAISMLRVREAWRLMAEKKEFTKEMMLRAADEIYYVPEGTPLSTQLIKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFTTSMSPTLAEEVTPQNDGSVIIDGTANVREINKAFNWHLPEDDARTVNGVILEALEEIPVAGTRVRIEQYDIDILDVQENMIKQVKVVPVKPLRESVAE
complement(2070554..2071345)       PHAGE_Escher_500465_1_NC_049342: minor tail protein; CEP98_10915; phage(gi100056)     4.09e-172           SalmonellaentericasubspentericaserovarTyphimuriumMPVFALLALVAYSFSLALIVPGLLQKNSGWRRMAILSAVIALVCHAVALESRILPGGDSGQNLSLLNVGSLVSLMICTVMTIVASRNRGWLLLPIVYAFALINLAFATFMPNEYITHLEATPGMMVHIGLSLFSYATLIIAALYALQLAWIDYQLKNKKLAFSNEMPPLMSIERKMFHITQIGVVLLTLTLCTGLFYMHNLFSTENIDKAVLSIVAWFVYIVLLWGHYHEGWRGRRVVWFNVAGAGILTLAYFGSRILQQFVS
complement(2071291..2071587)       hypothetical protein; CEP98_10920                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMSSVRRPRPLILRSVRDKRSVKLSNIVSRLGWKRLVAAATQLQNFATVYHEAVFVVMQRLELRSRNAILLLFLTGQLSTQLCPFLLYLPLSPTPSASR
2071511..2072872                   PHAGE_Escher_500465_1_NC_049342: tail length tape-measure protein; CEP98_10925; phage(gi100057)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMFDNLTDRLSRTLRNISGRGRLTEDNVKETLREVRMALLEADVALPVVREFINRVKEKAVGHEVNKSLTPGQEFVKIVRSELVAAMGEENQTLNLAAQPPAVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEIKQVHASIKPVETLFVVDAMTGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTDALEPFHPDRIASRILGMGDVLSLIEDIESKVDRAQAEKLATKLKKGDGFDLNDFLEQLKQMKNMGGMASLMGKLPGMGQIPDNVKSQMDDKVLVRMEAIINSMTLKERAKPEIIKGSRKRRIAQGCGMQVQDVNRLLKQFDDMQRMMKKMKKGGMAKMMRSMKGMMPPGFPGR
2071646..2071657                   attR                                                                                 N/A                 CCGGTAGTGCGT

#### region 3 ####
2104890..2104903                   attL                                                                                 N/A                 GGTGGTTATGGATC
2110048..2110623                   PHAGE_Rhizob_vB_RleM_P10VF_NC_025429: RNA polymerase sigma-70 factor; CEP98_11120; phage(gi712913000)     2.10e-09            SalmonellaentericasubspentericaserovarTyphimuriumMSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPSGDVPDVVQESFIKAYRALDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDAIEAENFESGGALKEISNPENLMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRAREAIDNKVQPLIRR
2110655..2111305                   anti-sigma-E factor RseA; CEP98_11125                                                N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMQKEKLSALMDGETLDSELLKALTHDPEMQKTWESYHLIRDSMRGDTPDVLHFDISARVMAAIENEPVRQVSPLIPEAQPAPQQWQKMPFWKKVRPWAAQLTQMGVAACVSLAVIVGVQHYNGQSETSQQPETPVFNTLPMMGKASPVSLGVPSEAAPVGSQQQQVQEQRRRINAMLQDYELQRRLHSEQLQFEQAQTQQAAVQVPGIQTLGTQSQ
2111305..2112261                   sigma-E factor regulatory protein RseB; CEP98_11130                                  N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKQLWFAMSLVAASLFFSANASADPASGALLQQMNIASQSLNYELSFVSITKQGVESLRYRHARLDGRPLAQLLQLDGPRREVVQRGNEISYFEPGLEPFTLNGDYIVDSLPSLIYTDFKRLAPYYDFISVGRTRIADRLCEVIRVVARDGTRYSYIVWMDMDTKLPMRVDLLDRDGETLEQFRVIAFTVSQDIGSNMQALAKANLPPLLSVPGGEKTKFNWSPSWVPQGFSEVSSSRRPLPTMDNLPIESRLYSDGLFSFSVNVNRATQNSSDQMLRTGRRTVYSSVRDNAEITIVGELPPQTAKRIADSIKFRAVQ
2112258..2112737                   SoxR reducing system protein RseC; CEP98_11135                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMIKEWATVVSWQNGQAVVSCDVKASCSSCASRAGCGSRVLNKLGPQTTHTIVVPSAEPLAPGQKVELGIAEKSLLGSALLVYMSPLAGLFLCAALFQMLFGSDLAALSGAVLGGVGGFLVARGYSRKLAERDAWQPVILNVALPPDLVRVETTSIETRQ
2112767..2112883                   transcriptional regulator; CEP98_11140                                               N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMGCCPDKHALFLRCGVLQEKSEAFSSSRSPYTMNISSP
2113233..2114578                   PROPHAGE_Escher_MG1655: IS150 transposase B; CEP98_11145; phage(gi16131429)          3.42e-117           SalmonellaentericasubspentericaserovarTyphimuriumMEKFSLEFKKVVSEKYLEGELSLKSVARMYGISPCTVRKWAYAYREHGISILTGKKGRYSAELKLTVVKEVVDDCFSVREVAVKHGIPAFGTVCNWLEKYRKYGEDAFIRKNKKSIPVPDKSAISAPPLPTLTKDEREELEQLRVENAYLKKLKALVQQKTLLNVQEKVSIVNELRQEWPLSRLLIVSGLPRSTFYYHVRRLAAPDRYQSARALVLKIYHQHKGRYGYRRIRLACRNEGVLLNGKTVRKLMKELGISSLIRVKKYRSYKGEQGRICDNLLKRNFDAKRPNEKWVTDVTEFKVNGKKLYLSPIMDLYNGEIISYNLATRPQPSMVQTMLTDALKQLSKDEHPILHSDQGWQYQMSRWQRWLKDSGIVQSMSRRGNCLDNAVIESFFGTLKSECYYLNEYKNVEDLKRDIIDYINYYNQLRIKEKLGGLSPVQYRLSQAA
2114659..2115888                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage integrase protein; CEP98_11150; phage(gi169257266)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMAISDSYLKSCLGRERDKVEEKADRDGLWVRISKKGTVTFFYRFRFLGKQDKMTIGSYPEFGLKAAREEVAKWAAVLARGENPRIRQSLDKAKINSQYTFEELFREWHAMVCVQKETSDQILRSFELHVFPELGKYPAHQLTLHNWLTVLDRLAQGYTEITRRVISNGRQCYSWAVKRQLLEANPLSEMSGRDFGIQKKMGERTLDRKEIAIVWRAIEDSRLIERNKILYKLSLIWACRVGELRQAEVSHFDFEEGVWTVPWENHKTGRKSKKPIIRPIIPEMLPLIQRAIELAPGRFVFSKYADKPMSEGFHMSISSNLVKFMLKAYNEQVPHFTIHDLRRTARTNFSELTEPHIAEMMLGHKLPGVWSVYDKYTYIEEMREAYSKWWARLMSIIEPDVLEFTPRQTG
complement(2115866..2116150)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; CEP98_11155; phage(gi169257265)     7.89e-63            SalmonellaentericasubspentericaserovarTyphimuriumMSKKIRDFELMSTSEICCQLRISSRTLDRYRKRPSDNNPFPEPDCSYMGGSNKWLKTKVNEWQVREMSRPTRRPMSHLNLPRDNKGRLIRSDVA
complement(2116191..2116430)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; CEP98_11160; phage(gi169257264)     4.72e-50            SalmonellaentericasubspentericaserovarTyphimuriumMRLINRSKQSPLGRRACDVALAAHHEKFGDYGRQKHVTNYTVVVDGVKVPVEVVNRATSYVATAMIGVRKLWSLPAQAK
complement(2116473..2117630)       PHAGE_Phage_Gifsy_1_NC_010392: RecT; CEP98_11165; phage(gi169257263)                 0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMCVALKRCAYRHKGKIMENTNIVTTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAIVMQAMQWGMNPYAVAQKTHLVNGVLGYEAQLVNAVIASSSAIHGRFHYRYGGDWERCTRTKEITRDKNGKNGKYTVTERVRGWTDEDEIGLFVQVGAILRGESEITWGEPLYLSGVVTRNSPLWVSNPKQQIAYLGVKYWARLYCPEVILGVYSPDEVEQREEREINPVPVQRMSVQEITSEVSTTTSAQESATNVDAVADDLRERIDTASSVDQAKAIRADIESQKALLGTALFTELKNKAVKRYYQVDAQNKVEAVINSIPNSGEPEAAEMFAKAESTLSAAKRHLGDELHDKYRITLDDMKPEYIG
complement(2117593..2120793)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage exodeoxyribonuclease VIII-like protein; CEP98_11170; phage(gi169257262)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMEFFYVVKATQKSGKQDATVWFTAKSEARANLMLDVVLEDAEIETGRGKDYARPIRTNFPVVNELPPEGEISFTFTNYYRLGEDGMTWEQIPGVTLPSSEAAAAARQHIVDGVDTETGEVLEDHTENFGNESNSPAQATAPAPELTVVATMPLRHRVLAQYIGEGEYLYHVDTDQKKEIACLEMDTQNTTVQNLILAAENVEPFKKAIEHDIHKAVNAYKQVFPVDGKVPELCTTIKFFKEWFRAEHINRGLLVKEWAERLKNKPAPVKKTGPHKVIVDDVNKPERPRRSEKPTHRTINYELACGFCEELDLNNLRPAMDFAKRIIAEDREDWKRMSMTVGIIPDIKGYDRQTIIDLVRKAPKAVHNGNPDLRRTWCESFLAVHGVRDPDWYEYVPDNTPTTHEENAARLRQAGKCLRDIEAGRFQCDEEKQQPTGELADEPATPEAVEQDTTEHHPDPQPLENEPPVSQTEAGYQKIRAELHEARKNIPPKNPVDVGKQLAAARGEYVEGISDPNDPKWVKTETSQPASEPELVKNVGNGIFDVSALMQNSSTHGTETNPETTSNVQVQKADSDEKQAGDAVQAGESDLGTGKEAVTIENQSQAETHQNNTSVSQSEPEEQQNVPDSPQEKPEAAWPEYFEPGRYEGVPNEVYHAANGISSTQVKDARVSLMYFNARHVEKTIVKERSPVLDMGNLVHTLALQPENLEAEFSVEPEIPEGAFTTTATLREFIDAHNASLPALLSADDIKALLEEYNATLPAPVPLGASLEETGQSYMALPAEYQRIDADQKQTAAAMKACIKEYNTTLSTPVKTSGSRDALLEQLAIINPDLVTQEAQKSVPLKVSGTKADLIQAVKSVNPAAVFADELLDTWRENPEGKVLVTRQQLSTALNIQKALLGHPTAGKLLTHPSRAVEVSYFGIDEETGLEVRVRPDLEIDMGGLRIGADLKTISMWNIKQEGLRAKLHREIIDRDYHLSAAMYCETAALDQFFWIFVNKDENYHWVAIIEASTELLELGMLEYRKAMRAIANGFDTGEWPAPITEDYTEELNDFDVRRLEALRVQA
2121497..2121510                   attR                                                                                 N/A                 GGTGGTTATGGATC
2121504..2121710                   PHAGE_Entero_HK225_NC_019717: hypothetical protein; CEP98_11175; phage(gi428782417)     7.51e-25            SalmonellaentericasubspentericaserovarTyphimuriumMDRDELEEDRAAFIAGEIGGAVVELIIDGVVISRDAIVDSLEAKRRAVGNVIHKGVLRDAAAMVRKGQ
complement(2121818..2122903)       PHAGE_Ralsto_RsoM1USA_NC_049432: minor tail protein; CEP98_11180; phage(gi100055)     6.61e-10            SalmonellaentericasubspentericaserovarTyphimuriumMDNGRVEATDRPTEMIASNTKYLVWNNKGGVGKTFLTYNLAVEFAISHPDQDVVVIDACPQSNVSEIILGGNGTGEENLNYLRDRNVTIAGYIKERFSKSPLSRLGNESSYFVRAHTVNSKMPENLYILPGDVDLDICSRLISHIGSSPVKEAWKKSRSLLVDLIASLEADKSISDRAKTFFIDCNPSFASYTELGVVAANRIIIPCTADAASIRGIKNLVKLIYGVSIDKSEQDEMFLDFNKEAIQNLIELPKLHLFVQNRSRTNESDAAKAFKSHAEEIKRITDDLLKTHPHLFTSGNLSERVQNVKDGNTLAAIINHEGCPLSKLQHKSYTIYGMATQANKAQIEALESDVSTVVKCL
2122938..2122949                   attL                                                                                 N/A                 TTATAAAAAATA
complement(2123055..2123522)       PHAGE_Entero_mEp237_NC_019704: prophage repressor; CEP98_11185; phage(gi435439304)     2.87e-97            SalmonellaentericasubspentericaserovarTyphimuriumMTKVKHHFTNKSNNTCLPTSKAIIYNEVMSDNTLTNGLISRLAELNKKGFSKTEMARVAGVSKQAVSSWFKTGRISKSSALAIADAAGVSVPWLLGEDVGEKDGLKPDEQRLLELYRQLPEEEQQNMMRVFSLRLKELDELYAKYMSRRIKGEGA
2123536..2123763                   PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical prophage protein; putative Cro analog; CEP98_11190; phage(gi169257257)     1.98e-12            SalmonellaentericasubspentericaserovarTyphimuriumMTGIEKAIQKFGTGAALGRALGFSKMTISNWKKTGIPPDHIRSVFELTGVTPHELRPDLYPNPTDALPSQEASAK
2123729..2124103                   PHAGE_Phage_Gifsy_1_NC_010392: probable regulatory protein; transcriptional activator; lambda CII analog; CEP98_11195; phage(gi169257256)     3.15e-85            SalmonellaentericasubspentericaserovarTyphimuriumMHYQAKRRQPNNHRGYLPMENAIARKLDPPEINPIEIESVLLNRLASVGQKSYAEHMGISESTVSRRKAEGYFCNMAKELAFLGIQAAPPEAVLVSRNYLTAVEILADAGLKAERARPDALGWD
2124195..2125100                   PHAGE_Salmon_SEN34_NC_028699: replication protein O; CEP98_11200; phage(gi966201463)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMANTAKVINFPVPDVAPKEPRVADLDDGYTRLANELLDAVMCSGLPETELCILMAVWRKTYGYNKKMDWISNEQLEEMIQKHHTHCSTAKNSLIRKKVLIQEGRRVGMNIHISEWQTKNNGFCKTLAKPAKKTLAEVANAPKQKLLTTKDKLTKDNIKRSTSENSDESSDKPAKKPHVLKPEAAIQRGNKWGTAEDLTAAEWMFDLIKTISPSARKPNLAGWANDIRLMRECDGRTHRDMCVLFRWACHDSFWAGNVISPAKLREKWTQLDINRNKQQTGTTASKPKLDLNNTDWIYGVEL
2125097..2125789                   PHAGE_Escher_HK639_NC_016158: replication protein 14; CEP98_11205; phage(gi356870655)     1.13e-101           SalmonellaentericasubspentericaserovarTyphimuriumMKNIAAQMVNFDREQMRRIANNMPEQHDDKPQVEQVAKVINNVFSQLMAAFPATTANRSQAEMNEIRRQWVLAFRENGITTMEQVAAGMRVARRQERPFLPSPGQFVAWCREGSGALGVSVDDIMGEYWRWRKLVFRYPTSEQFPWRDKNPLYYHVCLELRRRGMEGQLSEKELIRAAGDILHEWEKRVLAGKPIPPVRRALAAPSRDRGPTPAEMLMAKYKQRKDAGLI
2125804..2126469                   PHAGE_Entero_UAB_Phi20_NC_031019: tail length tape-measure protein; CEP98_11210; phage(gi100057)     3.23e-29            SalmonellaentericasubspentericaserovarTyphimuriumMSNIDKQALREAAVAIETVATPQKLLAFRVKVTPQVVLALLDENLQLQREKDAIEAVALALRDDMRQAREQLEAAEKRIAEQREYYEGVIADGSKRIAELERSETQLISERDDAESALNDAYKAVMGQAPEWSNWFSFENAIDEIELACELWRNQTDDVIQFRQRIVELEAKLETADRLQDGAFRDGLKAGFSYGQTDDQSGFAQCMSAYSTRTDIGVKVE
2126471..2126941                   PHAGE_Gordon_Nymphadora_NC_031061: capsid maturation protease; CEP98_11215; phage(gi100067)     1.12e-67            SalmonellaentericasubspentericaserovarTyphimuriumMAETILDVCCGSRMFWFNKQDSRAVFADIRAEEHTLCDGRRLVISPDLIADFRALPFADSSFPVVVFDPPHLERVGQTAWMGKKYGRLNKKTWRSDLRAGFKEAFRVLRPHGVLIFKWNETQIPVSQILALTDVKPIIGQRTGKNDKTHWIIFVKD
2126944..2127597                   PHAGE_Entero_UAB_Phi20_NC_031019: minor tail protein; CEP98_11220; phage(gi100055)     5.30e-66            SalmonellaentericasubspentericaserovarTyphimuriumMTTITKEWLQQTIAEFENTRDDIPFGLDDDDAKILIVLKRALASLERERIRREHAEWSDKTFGDVGPVGPLKHLSKEALEAAADPSDPLEWADMQFLLWDAQRRMGISDEFITRAMIEKLEINKSRQWPEPKDGEPRLHIKEQSAPVIPDGWISCSERMPDEIGRYWCYVEEQNDLGKSHYQWNCSWNGDKWGGEMMSGKVTHWMPLPEPPQEFNRG
2127590..2127871                   PHAGE_Escher_phiV10_NC_007804: hypothetical protein; CEP98_11225; phage(gi89152468)     7.98e-61            SalmonellaentericasubspentericaserovarTyphimuriumMANLQLAVKGEYFDAMIRGEKTEEYRLCNDYWNKRIMFREYDRLIITKGYPKRDDSSRRIDVPYGGYEVKTITHPHFGDEPVKVYAIKVNINC
2127983..2128174                   PHAGE_Escher_HK639_NC_016158: hypothetical protein; CEP98_11230; phage(gi356870631)     7.78e-25            SalmonellaentericasubspentericaserovarTyphimuriumMKMFMQIDRRIDVNGNSYLVRCEERPNGEWRVYDIDRKVNISTMNKDTAFDEWKAEAKKQHNS
2128433..2128666                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage putative DNA damage-inducible protein; DinI homolog; CEP98_11235; phage(gi169257250)     2.75e-50            SalmonellaentericasubspentericaserovarTyphimuriumMRIELVISRTKQLPEGAVPALEKELITRLQNQYENCNLTIRRGSQDGLSIVGAADGDKKRIQSILQETWESADDWFY
2128783..2129031                   PHAGE_Entero_mEp237_NC_019704: hypothetical protein; CEP98_11240; phage(gi435439314)     3.96e-52            SalmonellaentericasubspentericaserovarTyphimuriumMSNSALQKSEDSWYDIVRRSDGCVVFSFPSSGRHLIYRVNGMVSMRPLLDDEEVFTPNGFMHFIRRLGYRVTPPSDNMKSTA
2129066..2129668                   PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; CEP98_11245; phage(gi169257248)     1.72e-145           SalmonellaentericasubspentericaserovarTyphimuriumMAHELQLIKQSSGILIPATPETSDILQSKIKLGAVLVAEFRQVRNPAFHRRFFALLNLGFEYWEPTGGAISANERKLVNGYAKFLAAYGGNESALLDAAEQYLEQIANRRVTNGISLCKSFDAYRAWVTVEAGHYDAIQLPDGTLRKHPRSIAFSSMDEVEFQQLYKSALDVLWRWILSRTFRTQREAENAAAQLMSFAG
2129668..2129874                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; CEP98_11250; phage(gi169257247)     3.43e-43            SalmonellaentericasubspentericaserovarTyphimuriumMAMKYSWFHHHDCTTEQADTLVSDYQKRGIRTEKSLNPDFITWTVSAKLPEYAHRVRTPKSLRQKVWG
2129877..2130488                   PHAGE_Phage_Gifsy_1_NC_010392: NinG; CEP98_11255; phage(gi169257246)                 1.41e-147           SalmonellaentericasubspentericaserovarTyphimuriumMAKLPRRKCANKECRQWFHPIREGQIVCSYQCASAVGKEQTRKAREAAQRKAQSLQRAAEKKERAAWRQRKAAVKPLKHWIDLTQRAVNDICRETELAEGLGCISCGTKTAFAWHAGHYRSTAAAGHLRFTRFNIHLQCDVCNVYKSGNIEAYRTALVERYGEAAVLALENNNTPHRWTVEELKEIRLAALADLRALKKLEAA
2130485..2130625                   PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; CEP98_11260; phage(gi169257245)     7.90e-26            SalmonellaentericasubspentericaserovarTyphimuriumMKPELIEILRMRWQRLRIYRRPGSVLVDYRILRNFVRIYQFTGFTQ
2130622..2131299                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage antiterminator protein Q; CEP98_11265; phage(gi169257244)     3.72e-165           SalmonellaentericasubspentericaserovarTyphimuriumMNTQYLQYVREQLMVATADLSGETKGQLLAWLENAQFDTKNYPRKKQRIWDEETESWITLNNPPIPGKQSLAKGSAIPLVKPVEYSTASWRRAVLSLDEHYKAWLLWNYSENTCWEHQVEITQWGWSAFAAQLDGKKMAGKTQERLRALIWLAAQDVKSELAGREVYQYKELAGLVGVSEKNWSETFTRHWLTMRAIFLRLDQASLLSVSESRSEQVAFNLYALN
2131296..2131481                   hypothetical protein; CEP98_11270                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMTQTVIRGYIPSTPAKSGVGIGVPEFHRDRDTPRACFLLSFVYAHLNYGGAYGGAERLAGR
2131572..2132134                   PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; CEP98_11275; phage(gi169257243)     8.48e-35            SalmonellaentericasubspentericaserovarTyphimuriumMTTQISVETLSPITHNQIPVITTELLAHLYGTKIKNISDNFLNNTTRFVVGKHFLKLKKTNYASSRTDPKQSGLVKMPVPSSGQNAALPATPRCSKQIRLGRCSKNWRIAISVRHYHRQHARFSLPSTCLTSTFLRSAMVTSKTFGRLVQTCSLEKSRYADYAIAAGSLKGICLLRSWRRGGA
2132476..2132552                   tRNA                                                                                 N/A                 CCGCCATTAGCTCAACTGGAAAGAGCACGGAGCTTCTACCTCTGTGGTTCGGGGTTCGAATCCTCGATGGCGGACCA
2132641..2132829                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; CEP98_11285; phage(gi169257242)     5.18e-40            SalmonellaentericasubspentericaserovarTyphimuriumMKEGFYWIQHNGRVQVAYYTHGVTEDLETGQTIIGVWHLTQGDDICHNGEAEILAGPLEPPI
complement(2133044..2133730)       PHAGE_Phage_Gifsy_1_NC_010392: virulence protein GogA; CEP98_11290; phage(gi169257241)     9.93e-169           SalmonellaentericasubspentericaserovarTyphimuriumMPAGIKPIFINNMMSIYGLSHPHDSKVFPDLPEHQDNPSQLRLQHDGLATDDKARLEPMCLAEYLISGPGGMDPDIEIDDDTYDECREVLSRILEDAYTQSGTFRRLMNYAYDQELHDVEQRWLLGAGENFGTTVTDEDLESSEGRKVIALNLDDTDDDSIPECYESNDGPQPFDTTRSFIHEVVHALTHLQDKEDNNPRGPVVEYTNIILKEMGHTSPPRIAYESSN
2134006..2134335                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysis protein; holin; CEP98_11295; phage(gi169257240)     1.57e-73            SalmonellaentericasubspentericaserovarTyphimuriumMNDKTPEFWAAVLTGLKNAWPQILGALMAGLIAYGRLIYDGATRKNKWLEGVLCGALSLCVTSALDVVGLPVSISPFVGGIIGFVGVDKLREIAISALKKRAGVNDENQ
2134319..2134771                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysin protein; endolysin; CEP98_11300; phage(gi169257239)     4.32e-106           SalmonellaentericasubspentericaserovarTyphimuriumMMRISEKGITLIKEFEGCSLKAYPDPGTGGDPWTIGYGWTHSVDGKPVKPGMMIDEATAERLLKTGLVGYENDVSRLVKVKLTQGQFDALVSFAYNLGARTLSTSTLLRKLNAGDYAGAADEFLRWNKAGSKVLNGLTRRREAERALFLS
2134789..2135241                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysis protein; Rz; CEP98_11305; phage(gi169257238)     7.71e-106           SalmonellaentericasubspentericaserovarTyphimuriumMFVGLLLVSLIVAGRLANHYRNNAITYKYQRDTATHNLKLANETITDMTKRQRDVAALDAKYTKELADAQNRNTDLQRRLAAGSRVRVEGRCTVPTTTTTKTASTRRVGNAATVELSPVAGQNVLDIRAGIISDQEKLKYLQEYIRTQCK
complement(2135477..2135878)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; CEP98_11310; phage(gi169257237)     1.04e-92            SalmonellaentericasubspentericaserovarTyphimuriumMKFKSIAKTVFLFALLTSAGFATGKNVNVEFDKGQNSARYSGVIKGYDYDTYNFQARKGQKVHVSISNEGADTYLFGPGISDSVDLSRYSSELDGNGQYTLPASGKYELKVLQTRNEARKNKAKKYSVNIQIK
2135913..2136107                   hypothetical protein; CEP98_11315                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMLYCNNNCSVFSRVLSGNSACYGAAASQDFTPYENFQRKARSVLLIVYFLFLKVFLEKKKGSAG
2136165..2136710                   PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; small terminase subunit; Lambda Nu1 homolog; CEP98_11320; phage(gi169257236)     2.91e-115           SalmonellaentericasubspentericaserovarTyphimuriumMNVNKKKLAEIFGCDVRTVTAWQSQGLPLVSGGGKGNEAVFDTAAAISWYAERDASIENEKLRKEVDDLRAAAESDLNPGTIDYERYRLTKAQADAQELKNAEREGLVLETELFTYILQRVAQEIAGILSRVPLVLQRKYPDLCQSHIDVVRTEIARASGRAATIADVEKWTDDFRRAQGE
2136682..2138613                   PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; large terminase subunit; Lambda gpA homolog; CEP98_11325; phage(gi169257235)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMISGERRANNANRAITNGLIALHIPVPLTTVQWADEYYYLPKESSYTPGKWETLPFQVAIMNAMGYELIRVVNLIKSARVGYTKMLLGVEGYFIEHKSRNSLLFQPTDSSAEDFMKSHVEPTIRDVPVLLELAPWFGRKHRDNTLTLKRFSSGVGFWCLGGAAAKNYREKSVDVVCYDELSSFEPDVEKEGSPTLLGDKRIEGSVWPKSIRGSTPKVKGSCQIEKAANESAHFMRFYVPCPHCGEEQYLKFGDGSTPFGLKWEKSKPETVYYLCEHNGCVIRQSELDQKAGRWICDNTGMWTRDGLAYFSASGEEVPPPRSITFHIWTAYSPFTTWIQIIYDWLDALKDPNGVKTFINTTLGEPYEEAVAEKLSHELLLEKVIHYAAPVPERVVYLTAGIDSQRNRYEMYVWGWAPGEEAFLIDKQIIMGRHDDEDTLQRVDAVINKKYRHADGTDISISRICWDIGGIDAEIVYKRSKKHGIFRVLPVKGASVYGKPVITMPKKRNQSGVFLCEIGTDTAKEMLYARMGAVTAPADEATPYAIRFPDNPDVFTEVEAKQLVAEELVEKLVNGKFRLLWDAKGRRNEALDCLVYASAALRVSVQRWQLDLEALATSRKSEEQDTPTLEQLAAMLAGGVNGNNH
2138597..2138800                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head-to-tail joining protein; adapter between portal and gpFII; Lambda gpW homolog; CEP98_11330; phage(gi169257234)     6.44e-42            SalmonellaentericasubspentericaserovarTyphimuriumMATITELQEARVALHDLMTGKRVATVQKDGRRVEFTATSVGDLKKYVAELEASLCNGRRRAPVGVRL
2138797..2140377                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage portal protein; Lambda gpB homolog; CEP98_11335; phage(gi169257233)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMKRTPVLVDVHGTPLRESLGYTGGGIGFGGQMADWMPPAESVDAALLPSLRLGNARADDLVRNNGIAANAVALHKDHIVGHLFLISYRPNWRYLGMRESAAKSFVDEVEAAWTEYCDGIFGEMDAEGKRTFTEFIREGVGVHAFNGEIFLQPVWDAETTQVFRTRFKAVSPKRVDTPGYARGNRQLRAGVETDRNGKALAYHVCDDDWPVAGGERWTRIPRFLPSGRPAMLHIFEPVEDGQTRGANQFYSVMERLKMLDTLQATQLQSAIVKAMYAATIESELDSEKAFEYITAADNKDTPLVNMLANYARYYSTNSIKLGGVKIPHLYPGDELNLQTAQDSDNGFSALEQALLRYIAAGLGVSYEQLSRDYSQVSYSSARASANESWRYFLGRRRFIAGRLATQMFSCWLEEALIRGVIRAPRARFSFWEARSSWSRSEWIGAGRMAIDGLKEVQESVMRIEAGLSTYEKELAIMGEDYQEIFRQQVRESEERRAAGLSRPVWITDTYQQQIAASRQTEEEKRAT
2140367..2141863                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage prohead protease; Lambda gpC homolog; CEP98_11340; phage(gi169257232)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMQRNLSHIISQATSAPLLLEPAYARVFFCALGRESGINSLHIPGNNESLDQSDMALVTGDFMATGKPQARFYQVVNGIAVLPVTGTLVHKLGGMRPFSGMTGYDGVTARLQQAVSDPEVKGILLDIDSPGGQAAGAFDCADMIYRMREQKPVWALANETACSAAMLLAAACSHRLVTQTSRMGSIGVVMAHTSYAEKLKQEGIDITLIYSGAHKADLTPSQKLPESVYADYQQRMDEARKMFAEKVARYTGLSVDAVMATEAAVYDGQAIITTGLADGMVNAADAIGVMAEAINSNKTGGTMPELSAADAVTQENQRVMGILGCPEARGHEALAQMLAGQPGMSVAQAKSILAAAAPADTTSTADRILALEEAGGRETLAQTLAAMPEMTVEQARTILAASPIAAATSLHDAVMALDEAKGREELAEKLAVMPGMTTDQARDLLAAAPDKSGNAGLSMNNAFDAFMQSHSPGPISGGKGHSNDTETTLLMSIPGTSAT
2141876..2142223                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head decoration protein; Lambda gpD homolog; CEP98_11345; phage(gi169257231)     3.50e-78            SalmonellaentericasubspentericaserovarTyphimuriumMSFTTTIEKRADNRIFAGNDPAHTATGVSGITAATPMLTPLMLDDTTGKLVAWDGQKAGTAVGVLALELDGSENLLTYWKSGTFATESLAWPKSVDAIKQANAFAGSAVSHAALP
2142278..2143306                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage major capsid protein; Lambda gpE homolog; CEP98_11350; phage(gi169257230)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMGLFTTRQLLGYTEQKVKFNPLFLSLFFRRTVTFPTQEVMLDKITGKTPIAAYVSPVVGGKVLRNRGGETRVLRPGYVKPKHEVNYAQVVERLPGEDPARLNDPAYRRLRILTDNLKQEEKAIVQVEEMQAVSAVLNGKYTMQGEQFDTVEVDFGRSAGNNIIQATGKKWSEQDRETFDPTYDLDMYCDQASGLINIAVMDGKVWRLLNGFKLFREKLDTRRGSNSQLETAVKDLGAVVSFKGYYGDLAIVVAKTSYVADNGTEKRYLPEGTLVLGNTAAEGIRCYGAIQDSQALAEGIVAATRYPKHWLTVGDPANEYTMTQSAPLMVLPDPDEFVIVTVG
2143364..2143723                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage accessory DNA packaging protein; Lambda FI homolog; CEP98_11355; phage(gi169257229)     9.93e-80            SalmonellaentericasubspentericaserovarTyphimuriumMATKEENIQRLRELATRLGRDPDVSGSAAELSQRVMEWEEEAEAEHLPAVENDSDESIVPPGIGQRSERVLIRALRTLHICAIDPDSNRELDMVMAGNPARISQHDVDELIAAGLIIEL
2143734..2144117                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage minor capsid protein; forms tail attachment site on head; Lambda FII homolog; CEP98_11360; phage(gi169257228)     9.38e-87            SalmonellaentericasubspentericaserovarTyphimuriumMSQSENLFDTAISQADDAILRVMGTVATITSGVLAGATLTGVFDDPESVSYAAGGVRIEGDKPTFFVKTSLTVHLKRPDTLTILGDTFWVDRITPAGGDSSIILLGRGTPPTDNRRRTGGMFDCSPA
2144145..2144723                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head-tail assembly protein; Lambda gpZ homolog; CEP98_11365; phage(gi169257227)     1.45e-135           SalmonellaentericasubspentericaserovarTyphimuriumMKGLENAIRNLNSLDRQMVPRASIWAVNRVAQKAVSVATRKVARETVAGDNQVRGLPLKLVRQRVRLFKAGTDGKRSARIRINRGNLPAIKLGAAQVRMSKRRGKLLYRGSVLKIGPYLFRDAFIQQLANGRWHVMRRVNGKNRYPIDVVKIPLSGPLTQAFESATQSLIDEEIPKQLGYALKQQLRLYLSR
complement(2144772..2146022)       PHAGE_Phage_Gifsy_1_NC_010392: transposase; CEP98_11370; phage(gi169257226)          0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMFAHQNASFPPRPEGRGGKEAVFRLTVFCIITFSSLICEAMKRAYKYRFYPTTEQAELLAQTFGCVRFVYNSILRWRTDAYYERKEKIGYLQANARLTALKKEPEFAWLNDVSCVPLQQSLRHQQTAFANFFAGRAAYPAFKSKRHKQAAEFTASAFKYRDGKLYMAKNKIPLDVRWSRPLPSVPSTVTISKDAAGRYFVSCLCEFEPASLPITSSMVGIDVGLKDLFVTDTGFRSGNPRHTAKYAARLALLQRRLSKKAKGSKNRAKAHLKVARLHAKIADCRLDALHKATRKLINDNQVVCVESLKVRNMIRNPSLSKAIADASWGELVRQLRYKGEWAGRSVVAIDQFFPSSKRCSCCGFIMKKMPLDVRKWQCPECGTDHDRDVNAARNIKAAGLAVLAHGEPVNPESLKAA
2146011..2146412                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail shaft stabilization protein; Lambda gpU homolog; CEP98_11375; phage(gi169257225)     4.01e-93            SalmonellaentericasubspentericaserovarTyphimuriumMSKHTLIRRAVLEKLESVTGAPVTLFDGLPAFVEQEDLPAIAVWLTDAQYTGLMTDEDDWQATLHTAVFLRAQAPDTELDIWMEEKIFPALEEVSGLERLIDTMTPLGYDYQRDSEMATWGMAEITYRITYTN
2146420..2147166                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage major tail subunit; Lambda gpV homolog; CEP98_11380; phage(gi169257224)     5.12e-174           SalmonellaentericasubspentericaserovarTyphimuriumMMGTPNPLVKTKGAGTTFWLYTGSGDAFKNPLADDDWLRLAGIKDLQPGEMSADAEDDDYLDDENADWKSTTQGQKSVGDTTATLAWKPGETGQKKLVELFDTGEVRAFRIRYPNGTVDVFRGWLSSLGKTVTSKEVMTRSVKITGVGRPSLAEEDTPDVVSVSGVTVAPASATVAAGATTTLTFTVKPDNASDKTLQVATADPLIATVTLKDNVATVKGVKAGSVNIVGISSDGSLVAVAAVTVTAS
2147217..2147612                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail assembly chaperone; Lambda gpG homolog; CEP98_11385; phage(gi169257223)     3.47e-93            SalmonellaentericasubspentericaserovarTyphimuriumMFLNTDTFNYGGHSIVLSELSALQRVDYLKFIQQRTADYDAQPETLTEAERQTEFMQMGVDINAWLVSRSLCESKKEEEARALYESVRLEWSYEALGRGADMVLSLSGMRLPASQEDDSGSEKDTTTPEKS
2147609..2147947                   PHAGE_Phage_Gifsy_1_NC_010392: part of bacteriophage tail assembly chaperone gpG by translational frameshifting; Lambda gpT homolog; CEP98_11390; phage(gi169257222)     2.45e-77            SalmonellaentericasubspentericaserovarTyphimuriumMNRELAFVMRLAREFRRPDWRQMLAEMSATELGEWAEHFGKNSFSDMLLDAEFATLKSLISGLVTGTHHDAEMFSLITDPESLHEKTDDELMILGEGITGGVRYGPDSEPGH
2147919..2151014                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; CEP98_11395; phage(gi169257221)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMDQIANLVIDLSIDSAEFRNEVPRIKKLLNDAAGDSERSAARMQRFLDKQTEATRRTSASLEQVTASSTAYSSAVEKSAAASTRLAADVDQTRQRVEALGRKLREEQAQSAAVAAAQDRTSAAFYRQIDSVKQLSGGLQELQRIQAQVRQAKGRGDISQGDYLALVSETARKTRELTDAEALATQKKAQFIRRLKEQTTVQGLSRTELLRVKAAELGVSSAADIYIRKLERTGTATHTLGLKSAAARRELGVLAGELARGNFGALRGSGITLANRAGWIEQLMSPKGMMLGGLAGGVAAAVYGLGKAYYEGAKESETFNKQLILTGSYAGKTTGQLNAMAKSLAGNGVTQHDAAGVLAQVVGSGAFTGQAMAMVSRTATRMQENVGQSVDETIRQFKRLRDDPVNAAKELDRTLHFLTATQLEQIRVLGEQGRVADAAKIAMSAYSEEMNKRMGDVHDNLGWIERAWNAVGDAAKWAWDRMLDIGREDTLDEKIATLQEKIARDRKTPWTVSSSQTEYDQQQLNELQEQKRQKDLLDAKAQAERNYQETQKRRNEQNAALNRDNETESLRHQREVARITAMQYADAAVRNAALERENERHKKALSQQAKKPKTYHNDEARRLLLQYSQQQAQTEGQITAAKLSTTEKMTEAHKQLLSFQQRIADLSGKKLTADEQSVLAHKDEIALALQKLDISQQDLQHQNALNELKKKTLTLTSQLADEESRVRQQHAMALATMGMGDQQRGRYEERLKIQQHYQEQLEQLKRDSKAKGTYGSDEYRQAEQALKGSLDRRLAEWADYNAKVDAAQGDWTLGASRALDNFLAQGGNVAGMTENVFTNAFNGMADSIANFAVTGKGSFRSLTVSILADLAKMEARIAASKLLGSVLAMFGFGTSAGGSTPSGAYSSAALSVIPNADGGVYRSAGLSQYSGSIVNRPTFFAFAKGAGVMGEAGPEAILPLRRGADGKLGVVAAGSGGMAMFAPEYNIEIHNDAGNGQIGPQALQAVYNIGKKAAIDFWQQQSRDGGIAGGGR
2151017..2151346                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpM homolog; CEP98_11400; phage(gi169257220)     9.20e-77            SalmonellaentericasubspentericaserovarTyphimuriumMETFNWKIRPDMTVESEPKVTSIKLGDGYEQRRPAGLNNHLAKYNVTVRIRKGEHQNLEAFLSRHGGVKSFLWTPPYTWTQIRVICRKWSINVGSLWVTVTTTFEQVVI
2151356..2152054                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpL homolog; CEP98_11405; phage(gi169257219)     3.80e-174           SalmonellaentericasubspentericaserovarTyphimuriumMQDISQDTLNESAKLAQSARITLWEIDLTQSGGDRYFFCNEANEKGEAVTWQGRKYDVYPVDGCGFEMNGKGAAARPSLKVSNLYGMVTGMVEDLHSLVGATVIRRIVYARFLDAVNFQNGNQEADPEQESVSRWVIEQCSDLTAVSATFVLATPTETDGCVFPGRIMLANTCTWIYRSDECGYTGPAVADEFDNPTADPAKDACSRCARGCALRNNTGNFGGFLSINKLSQ
2152061..2152798                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpK homolog; CEP98_11410; phage(gi169257218)     7.26e-148           SalmonellaentericasubspentericaserovarTyphimuriumMKEQDILAHARRCAPAESCGFVVRTQAGERYLPCVNISAAPEDYFRMAPEDWLRAETQGDIVALVHSHPGGQPYLSDVDRRLQVQSDLPWWLVCAGQVHKFRCVPHLTGRHYKHGVFDCYTLFRDAYHLAGIDMPDFHRDDDWWRHGDNLYLDNLETTGFYRVSAASAQPGDVLICCFGSSVPNHAAIYCGDGELLHHIPEQLSKRERYTDKWQRRTHSIWRHRAWRASAFTGICNDFAAASACR
2152696..2153343                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpI homolog; CEP98_11415; phage(gi169257217)     8.95e-156           SalmonellaentericasubspentericaserovarTyphimuriumMATTHALHLATPGMARICLYGDLQRFCRRVSLQVASGAEAVRALAVQLPGLRQKLNDGWYQVRIAGDDVTADTLTTSLHDPLPPGAVIHIVPRLGGAKSGGVFQAVLGAALIAVAWWNPAGWLGAAAVSGMYMTGASMVLGGVAQMLAPKPKMSEMRQTDNGRQNTYFSSLDNMVANGNTLPVLYGEMQVGSRVISQEVSTADEGDGGQVVVIGR
2153405..2156767                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage host specificity protein; tail fiber; Lambda gpJ homolog; CEP98_11420; phage(gi169257216)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMGKGGGKGHTPREAPDNLKSTQLLSVIDAISEGPIEGPVNGLQSVLVNQTPVVDRDGNTNIHGVKVVYRVGEQEQTPLEGFESSGAETVLGVQVKYDNPVTRTITAANIDRLRFTFGVQSLVEANSKGDRNPTSVRLQIHLERYGQWVVEKEITITGKTTTQYLASVIVDNLPPRPFGIRMVRVTADSTTDQLQNNTVWSSYTEIIDVRQRYPNTAVIGLQVESEQFGSQQVTRNYHFFGRIIHVPSNYDPVARTYSGIWDGTFKPAYSNNPAWCLWDVLTHPRYGMGQRIGAADVDRWALYAIGQYCDQMVPDGFGGTEPRMTFNAYLAQQRKAWDVLTDFCSAMRCMPVWNGQMMTFVQDRPSDTVWTYTRSNVVMPDEGTPFRYSFSARKDRHNAVEVNWIDPDNGWQTSTELVEDTVAISHYGRNLVKMDAFGCTSRGQAHRAGLWLIKTELLETQTVDFSVGAEGLRHVPGDVIEVCDEDYAGISLGGRILSVDRARRILTLDREITLPSSGTTLISLMDGEGLPVSVDVQSVTDGVQVQVSRIPDGVAEYSVWGLKLPSLRQRLFRCVAVRENDDGTYAITAVQHVPEKESIVDNGASFDPQPGTIHGTVPPAIQHLTTEILAEEGQYQVLARWDTPRVVKGASFSLRLNVAAEDGSDRLVSSAGTPDTQYRFRGLTPGRYTLSVRAVNSQGQQGDPASTQFSISAPAAPSFIELTPGYFQITATPRQAVYDPTVQYEFWFSDAQITDIHQVENAARYLGTALYWIAASVNIRPGRDYYFYIRAVNQVGKSAFVEATGQASNDAAGYLDFFKGQITESHLGKELLEKVELTEDNASKLQQFSKEWQDANDKWNAMWGVKIEQTKDGKYYVAGLGLSMEDMPDGKISQFLVAADRIAYINPANGNETPGFVMQGDQIIMNEAFLKYLSAPTITSGGNPPAFSLTPDGKLTAKNADISGHINAVSGSFTGEINATSGKFSGVIEAREFVGDICGSKVMQGVSIRETNDERSTSTRYTDSATYQIGKTITVMANCERNGGSGAITVTININGQVKTAEVIPYTAGLPAMYQTVVFSVYTTSPVVDISVSLRVRGQYTTSASVWPLVMVSRSGNNFTN
2156806..2157048                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; CEP98_11425; phage(gi169257215)     1.82e-53            SalmonellaentericasubspentericaserovarTyphimuriumMTMSRVISLAAGVSLSVLFSTAAVADNGRGSGNSNIENQTRIYTGTDRGQKQHREAKGQIITRSVQCSLPAYLRDPDNQC
2157102..2159474                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage side tail fiber protein; Lambda gpSft (gpN) homolog; CEP98_11430; phage(gi169257214)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMPVLISGVLKDGTGTPVQNCTIQLKACRTSTTVVVNTVASENPDDAGRYSMDVEQGQYTVTLLVEGYPPSHAGVITVYDDSKPGTLNDFLGAMTEDDVRPEALRRFEAMVEEVARQASEASRNATAAGQASEQAQTSAGQAAESATAAVNAAGAAEASATQAASSAASAESSAGTATTKAGEASASAASADTARTAAAASAAAAKTSEANADVSRTAAGDSAAAAAASATAAQTSAARAGASETAAKTSETQAASSAGDAGASATAAAASEKAAAASAAAAKISETNAATSASTAAASATAASSSASEASNHAAASDTSASLAAQSSTAAGAAATRAEDAAKRAEDIADVISLEDASLTKKGIVKLSSATDSDSEALAATPKAVHAVMDEVQTKAPLDSPVFTGTPTTPTPPDDAKGLQTANAEFVRKLIAALVGSVPESLDTLQELADALGNDPNFATTITNMIAGKQPLDDTLTALSGKSIEGLIEYVGLRSTIDKAAGALPAGGTAVAANRLASRGALPALTGTTRGSDGGLIMGEVYNNGYPTQYGNILRLTGTGDGEILIGWSGTNGAPAPAYIRSHRDTADAEWSEWAMLYTTLNPPPDSHPVGAAIAWPSDATPAGYALMQGQSFDKSAYPLLAIAYPSGVIPDMRGWTIKGKPISGRAVLSQEMDGNKSHSHTARAQDTDLGTKSTSSFDYGTKSTNTTGNHTHQFGGYINSYWGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYIVRLA
2159471..2160295                   PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical protein; contains pfam01661, Macro, Macro domain; CEP98_11435; phage(gi169257213)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMIKLILSAPVPAMAVAFEHSFQNTENVEIIPGPFETIPEFDCMVSAANSFGLMDGGVDAAITAYFGPQLQERVQQHILREYLGEQPVGTAFVIETGNSKYPWLVHAPTMRVPLIIDGTDAVYNATRAALLAIFQHNKSAGEDRKIKSVVFPAMGAGCGQVSPGSVARQMKLAWDGFINCTTEINWQYASARQNAVFSTTAYCPSKALCPNARTEYIGFGDYRTYCKKSGNTCISPRHQVDDIYIGAHSHAVFLSPNSHGKHLKPEYLSGVKNDV
2160285..2160863                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage side tail fiber assembly factor & structural component; Lambda gpTfa homolog; CEP98_11440; phage(gi169257212)     8.01e-141           SalmonellaentericasubspentericaserovarTyphimuriumMTFKMSDTPQTIKIFNLRSDTNEFIGAGDAYIPPHTGLPANCTDIAPPDIPASHIAIFDAETGTWSLHEDHRGETVYDTTTGNQVYISAPGPLPENVTSVSPDGEYQKWDGKAWVKDEAAETAARLREAEGTKSRLLQMASEKIAPLQDAVDLDEATDKEKASLLAWRKYRVQVNRVDTLKPVWPEKPASSL
complement(2160960..2161187)       PHAGE_Phage_Gifsy_1_NC_010392: PagK-like protein; CEP98_11445; phage(gi169257211)     9.51e-51            SalmonellaentericasubspentericaserovarTyphimuriumMPKFNRQRIIKHVKSVFLAMILILPSSLYSALTIAADSQDHKKEETIKPMPQKWCNLWPAGIPFPEDWFKMCRGY
2161294..2161506                   PHAGE_Escher_500465_1_NC_049342: hypothetical protein; CEP98_11450; phage(gi100035)     2.32e-08            SalmonellaentericasubspentericaserovarTyphimuriumMISAIIFSFQCKLIHMRVSSCAIQILTGSHPLGAQAGRLIRAGVPRQQVTIIYDAGLSTLYRKFPVSKLA
2161569..2161634                   hypothetical protein; CEP98_11455                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKREILSLRYTTRYSELLRVK
complement(2161998..2162184)       PROPHAGE_Escher_CFT073: putative transposase; CEP98_11460; phage(gi26246170)         3.23e-14            SalmonellaentericasubspentericaserovarTyphimuriumMPIIAPIPRTERRLMQKTIHKTRDKNHARRLTAMLMLQPGRQYRPRCQNALLRPFTHWTLDC
2162214..2162294                   integrase; CEP98_11465                                                               N/A                 SalmonellaentericasubspentericaserovarTyphimuriumLAIDQITQSGLSSIKVIYYSAQLFITL
complement(2162299..2162844)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; CEP98_11470; phage(gi169257210)     6.85e-133           SalmonellaentericasubspentericaserovarTyphimuriumMMRFVYIYILVIYGSYLWFSLGGNMFTINSTNRVASTIAPYACVSDVNLEDKATFLDEHTSIHANDSSLQCFVLNDQHVPQNTLATDVEGYNRGLQERISLEYQPLESIVFLLGTPAVLETKESLSLPVSPDALTQKLLSISSNDECKLSGSTSCTTPASHNPPSGYIAQYRHSAEVFPDE
complement(2163091..2163228)       hypothetical protein; CEP98_11475                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKNSIFLPLLLVLSATTFSALVMAASHSPHQIIQNIFPVAGRQIS
complement(2163713..2165206)       PHAGE_Phage_Gifsy_1_NC_010392: leucine-rich repeat protein; CEP98_11480; phage(gi169257209)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMTYRLKKRMKIGFQPAILQYAYTSNEATSNLELLNKWRIESPDIEKEERNSIYDKIIEANHTGSLSITAHHVTSIPVFPDNLSELNLSSCYTLESIPNLPDGLKSLTISGNQTIKISYFPDSLESLSIDMQAYEENYTFPALPYGLKSFTACYGKFLPPLPPHLSSLSLQNFSEILCAELPYKLDKLDLQNCPFLPLMKMLPEELKELSIELIRTVPGTVIDDILPDKLKKLSINFCDNIKLPVKLPVNLKSINLSSRTPIAWEIPTCNLPAHIDISTDGYVKLNPEFLTRSDITFSNKPAGDVLSFQPGDVVYGLCKARDRVNTLVNSLYYFSKKDIIIQNTLTDAVWDRKNRAVFNKDEKIAERLNDVQRGIFFREFLSQHKKYNITEDKYSDLSNEECWIKTSKAGLEFQTRLRERSVIFVIDNLVDAISDIANKTGKHGNSITAHELRWVYRNRHDDLVKQNVKFFLNGEAISHEDVFSLVGWDKYKPKNRNR
2173496..2173507                   attR                                                                                 N/A                 TTATAAAAAATA

#### region 4 ####
complement(2402187..2404247)       PHAGE_Escher_500465_2_NC_049343: hypothetical protein; CEP98_12605; phage(gi100042)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMRHQAHIVKIAIPPVRRVTYVKQYAIQPATLEFNAEGTPVSRDFDDVYFSNDNGLEETRYVFLGGNRLAERFPVHSHPLFIVAESGFGTGLNFLTLWQAFDSFRSAHPQATLQRLHFISFEKFPLTRDDLALAHQHWPELAPWAEQLQAQWPLPLPGCHRLLLDRGRVTLDLWFGDINELTDQLDATLNQTVDAWFLDGFAPAKNPDMWTPNLFNAMARLARPGATLATFTSAGFVRRGLQEAGFTMQKRKGFGRKREMLCGVMEQHLMPTLSAPWFYRSGSEKRETAIIGGGIASALLSLALLRRGWQVTLYCADDQPAQGASGNRQGALYPLLSKHDAAINRFFPTAFTFARRLYDALPVSFDHDWCGVTQLGWDEKSQQKIAQMLSLALPAGLASALNAEEAEQAVGVTTRCGGITYPAGGWLCPEQLTRAVIALATEQGLQTRFRHTLTSLVAQESRWQLRFTSGETASHETVVLANGHQINRFDQTQPLPVYAVGGQVSHIPTTPALSALRQVLCYDGYLTPQNPHNQQHCIGASYHRGDESTVWREEDQRQNRQRLLDCFPDAKWATEVDVSGNSARCGVRCATRDHLPMVGNVPDYHATLTHYADLADNKTSAAPAPVYPGLFMLGALGSRGLCSAPLCAEILAAQMSNEPIPLDAGTLAALNPNRLWVRKLLKGKAVK
2404347..2405561                   PHAGE_Escher_500465_2_NC_049343: DNA adenine methyltransferase; CEP98_12610; phage(gi100041)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDAGMRSQVWGNVKLDTTGLIDRKVVRFMSDASIYAYLSMEQAVADAGLAPEVYQNNPRVGLIAGSGGGSPKFQVFGADAMRSPRGLKAVGPYVVTKAMASGVSACLATPFKIYGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPSGEGAVRCMQMAMHGVDTPIDYLNSHGTSTPVGDVKELGAIREVFGDNSPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIVTETTERELTTVMSNSFGFGGTNATLVMRKL
2405659..2406315                   CPBP family intramembrane metalloprotease; CEP98_12615                               N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMPTNTLDKIRHSLSCVAVLFGLFGIFVFASFSPSYAWLYLGGLAAPFIYSIVFVYAIAAWSIYSKYYPFLSLGRLSFVECFVPALALVCLTVLYNAFSGPEPWMAELSRQFFLHKFLNTLAMCFLAPVAEEIIFRGFLLNSSIGWGRYSRASGIIITSLAFAFMHTQYLFAVTFVYLFVFSSILCVVRMRSRGLMIPIILHILNNAWVVFGLLFSATE
complement(2406382..2406900)       DUF3828 domain-containing protein; CEP98_12620                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKTFSLVALILLLCSCSAPHHDSTQAVKQFYTSWMTTFTNDVNTPDDTTALMQRYVAKEVIHRLALIQSLYEQEIVGADYFMYAQDYAPEWIPQLRVGKAHPFLGGEKVDVLLATESTPIHLEVYTRWEEGRWKIYRVRDADRGYEQPIYDAGAITQAEAWSAKVAPEYKKH
complement(2406900..2407268)       PHAGE_Acinet_Acj61_NC_014661: gp27 baseplate hub subunit; CEP98_12625; phage(gi311992945)     6.37e-09            SalmonellaentericasubspentericaserovarTyphimuriumMSWDKRMAVNYAKTHAGSHSQGRCAEFTRKAIQAGGITLGHTYHAKDYGPMLRSAGFTAIGTYEMPREGDVIIIQPYAGGNPSGHMAIYDGTEWYSDFKQRDMWAGPGYRAARPSYTIYRKN
complement(2407437..2407685)       PHAGE_Ralsto_RS138_NC_029107: transcriptional regulator; CEP98_12630; phage(gi985760910)     1.45e-24            SalmonellaentericasubspentericaserovarTyphimuriumMEPKSQDWHRADIKSALEKRGITLRDLSRQAGLSPDSLRNVFTRSWPRAERIIADALGITPKEIWPSRYDDMQIKNDADIAE
2407858..2408232                   PHAGE_Pseudo_JBD93_NC_030918: hypothetical protein; CEP98_12635; phage(gi100005)     2.12e-05            SalmonellaentericasubspentericaserovarTyphimuriumMAKEWFTVKECLGLPGFPGSEPAVRERLYKYSEGKEGVRRKRVKSKAEEFHISVFPLYVHRYLDDSGEEPTPEPISLQEAEPEDIWEMMFRLLTPEQRKQVTGRFKVRGMKAVFPFLFDDTPPR
2408412..2409590                   PHAGE_Escher_500465_2_NC_049343: hypothetical protein; CEP98_12640; phage(gi100040)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMTAVSQKTTTPSANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHELGYSNTMVGIAVGIQFFATVLTRGYAGRLADQYGAKRSALQGMLACGLAGAAWLLAALLPVSAPVKFALLIVGRLILGFGESQLLTGTLTWGLGLVGPTRSGKVMSWNGMAIYGALAAGAPLGLLIHSHFGFAALAGTTMVLPLLAWAFNGTVRKVPAYTGERPSLWSVVGLIWKPGLGLALQGVGFAVIGTFISLYFVSNGWTMAGFTLTAFGGAFVLMRILFGWMPDRFGGVKVAVVSLLVETAGLLLLWLAPTAWIALVGAALTGAGCSLIFPALGVEVVKRVPAQVRGTALGGYAAFQDISYGVTGPLAGMLATSYGYPSVFLAGAISAVVGILVTILSFRRG
complement(2409587..2410588)       PHAGE_Escher_500465_2_NC_049343: hypothetical protein; CEP98_12645; phage(gi100039)     9.21e-129           SalmonellaentericasubspentericaserovarTyphimuriumMHPISGAPAQPPGEGRNPLSAASEQPLSMQQRTVLERLITRLISLTQQQSAEVWAGMKHDLGIKNDAPLLSRHFPAAEQNLTQRLGVAQQNHANRQVLSQLTELLGVGNNRQAVSDFIRQQYGQTALSQLTPDQLKNVLTLLQQGQLSIPQPQQRPATDRPLLPAEHNTLNQLVTKLAAATGESNKLIWQSMLELSGVKSGELIPAKQFTHLATWLQARQTLSLQHAPTLHTLQAALKQPLEPDELTAIKEYAQHTYQIQPQTVLTTAQVQDLLNHIFLRRVEREADELEPLSIQPIYRPFAPMIETVKNLSARPGLLFIALIIVLALFWLVS

#### region 5 ####
complement(2548963..2549166)       PHAGE_Entero_HK225_NC_019717: DNA damage-inducible protein; CEP98_13320; phage(gi428782403)     3.06e-07            SalmonellaentericasubspentericaserovarTyphimuriumMPTIKKLADARDVILHELILHELIGHLSCAVVTVKSMQATNVNHVCTKTEKAHLHPILEKMFAVAGK
2549469..2550260                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; CEP98_13325; phage(gi169257320)     4.81e-83            SalmonellaentericasubspentericaserovarTyphimuriumMISLEDASLTKKGIVKLSSATDSDSEALAATPKAVKTVMGEVRTKAPLDSPAFTGTPTTPTPPGDAKGLQTTNAEFVRKLIAALVGSVLEPLDTLQELADALGNDPNFATTVLNKLAGKQPLDETLTALSGKSVDGLIEYVGLRETISRAADALQKSQNGGDIPDKDLFVRRIGAARAFDGAVIIGCDDNPWTTAEFIVWLESQGAFNHPYWMCRGSWSYAYNKIITDTGCGNICLAGAVIEVMGVRGAMTIRVTTSHSVSGW
2550557..2550760                   phage tail protein; CEP98_13330                                                      N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMPDTDENRRADIHAAGSLKTVKSFKGFIRRKSCAGRQNRKLNARALIPDDLVIVESDPEKIDTLAVK
2550929..2553295                   PHAGE_Phage_Gifsy_2_NC_010393: prophage virulence determinant; secreted effector protein; CEP98_13335; phage(gi169257322)     2.99e-86            SalmonellaentericasubspentericaserovarTyphimuriumMPFHIGSGCLPATISNRRIYRIAWSDTPPEMSSWEKMKEFFCSTHQTEALECIWTICHPPAGTTREDVINRFELLRTLAYAGWEESIHSGQHGENYFCILDEDSQEILSVTLDDAGNYTVNCQGYSETHRLTLDTAQGEEGTGHAEGASGTFRTSFLPATTAPQTPAEYDAVWSAWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLTTLPDCLPAHITTLVIPDNNLTSLPALPPELRTLEVSGNQLTSLPVLPPGLLELSIFSNPLTHLPALPSGLCKLWIFGNQLTSLPVLPPGLQELSVSDNQLASLPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLASLPTLPSELYKLWAYNNRLTSLPALPSGLKELIVSGNRLTSLPVLPSELKELMVSGNRLTSLPMLPSGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNPLSERTLQALREITSAPGYSGPIIRFDMAGASAPRETRALHLAAADWLVPAREGEPAPADRWHMFGQEDNADAFSLFLDRLSETENFIKDAGFKAQISSWLAQLAEDEALRANTFAMATEATSSCEDRVTFFLHQMKNVQLVHNAEKGQYDNDLAALVATGREMFRLGKLEQIAREKVRTLALVDEIEVWLAYQNKLKKSLGLTSVTSEMRFFDVSGVTVTDLQDAELQVKAAEKSEFREWILQWGPLHRVLERKAPERVNALREKQISDYEETYRMLSDTELRPSGLVGNTDAERTIGARAMESAKKTFLDGLRPLVEEMLGSYLNVQWRRN
2553380..2553616                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; CEP98_13340; phage(gi23505490)     1.14e-51            SalmonellaentericasubspentericaserovarTyphimuriumIRMTANQAYQQLAKLGVVEHRERYSRSAINGIKKFWSLTAKGCMFGKNITSPANPRETQPHFFESKFPELLKLLDTVH
2553624..2554613                   PHAGE_Salmon_118970_sal3_NC_031940: recombination endonuclease subunit D12; CEP98_13345; phage(gi100127)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMRALLTPEIAPRMGVVLFRPGAELMPLFMQGRVLLEPEPEQYSSFACGAVPAVSQPLADDPAVRDVFRNESVIYRAGGLDSLESWLLRGNGCQWPHSDWHSEQMTTMRHAPGAIRLCWHCDNLLREQFTERLKSIAVENTTKWVLSVVCRDLGFDDMHAVTLPELCWWMVRNDLAEVLPESAARKALRMPKAIVQSATRESEIVPSVPATSIVQDKAKKVLALRVDPESPESFMLRPKRRRWVNERYTRWVKSQPCTCCGKQADDPHHLIGYGQGGMGTKAHDLFVLPLCRTHHNELHADTVAFEEKYGSQLELIFRFIDRALAIGVLA
2554628..2554996                   PHAGE_Entero_cdtI_NC_009514: antitermination protein Q; CEP98_13350; phage(gi148609434)     6.45e-69            SalmonellaentericasubspentericaserovarTyphimuriumMMRDIQMVLERWGAWAASDSSGVDYSPIAAGFKGLLPYTCKTRVACSDNDALIVEGCLARLKQKRPDEHSLLVAHYLYRISKRKIAKVRGKDEKLVRIEIQLAEGFIDGCLSMLDLTLDMDV
complement(2555025..2556356)       NTPase; CEP98_13355                                                                  N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMLETLSFTERDEFQRRNIAENIIKLLKPEADISPLVIDGAWGTGKSEFSIKLKNLIIEQETESKVVYVDAFKGDHAESPLLLITSAIASILPEEEKQNFIKRSLPAIRFGLKTVLKAGAGWFLRQEASEVAEEFQDAMKKASNAAIDGTIENILEDHMESEKNINSLKSCIEDISNKQKIVIIIDELDRCKPSFSTNIIETIKHIFDINNVFFILVTNTEQLKASINHIYGYSINSQKYLDKFIKYTITLPDTCLINGHNVCKTSVIYWDHLVGETTLLNKINSLVGSFICDLIQRTNLSLRETQTFSRNLNIFRLLNDNECKSNDPFINMIVVVAVFIHCFGDKEKLKQEITAESISYLADLLNIKEIPYSYERRSQIPEISIIFFGIIKDSITLNERFAPKSDEELKKFTNVYTDYEHLKFWSTTPRELMIKYINQMSFIQ
2556653..2556982                   PHAGE_Salmon_ST64B_NC_004313: lysis protein (holin); CEP98_13360; phage(gi23505495)     3.51e-20            SalmonellaentericasubspentericaserovarTyphimuriumMPHNPNTWPDLLELLQSWWRGDTPLGAVIMSIVMAGLRIAYFGSGGGWKRKMLEILLCGALTLTFASALEYVGWMSRNEARAFEDMNPKDGLDEMLVSVNASRPAKTTI
2556996..2557439                   PHAGE_Entero_SfV_NC_003444: capsid protease; CEP98_13365; phage(gi19548994)          1.98e-93            SalmonellaentericasubspentericaserovarTyphimuriumMSEREIRCYSGEVRAETHDSEPSRIIGYGSVFDSRSELIFGSFREIIRPGAFDEVLNDDVRALFNHDPNFILGRRSAGTLALTVDERGLRYDITAPETQTIRDLVLAPMQRGDINQSSFAFRVARDGEEWYQDEDGVVIREITRFSRL
2557466..2557588                   PHAGE_Salmon_ST64B_NC_004313: putative tail protein; CEP98_13370; phage(gi23505467)     7.04e-23            SalmonellaentericasubspentericaserovarTyphimuriumCDSAIRTWGDTVAECVIDKLCPSHTVVVFAYPEGKENAQN
2557575..2558816                   PHAGE_Salmon_ST64B_NC_004313: tail protein; CEP98_13375; phage(gi23505468)           6.06e-63            SalmonellaentericasubspentericaserovarTyphimuriumMHRIDTPTAQKDKFGQGKNGFTNGDPATGRRATDLNSDMWDAVQEEVCTVIEAAGIPLSKGEHTQLHAAIGRLIYEQVKTRLEKNQNGADIPNKPLFLQNVGLVDVLFKGDGRFLAGTFVSDAIDRTSIGARAATGCQFMRAHQAPDAPDQVSFWQIITLSEVVSPTTVVDVLAVSGNNVLFGHGTGTGITSWRQVAMLEGGAFTGGISAPNMRGDTLVTVGDGTGGMAKGDVDGAGFNGNNLNIKSWNGIGFQNSEDLAIRAYISTRLGVIAAAENLQAGSAIFNKNGDVYGDIWGGGSGPGWLSAFVASKPARQYITMVGVYQNDKTKPFMLHDDGSGVFLATTDMLSGYVQSIRFGAVEHGNLYRSPGFADQLGYVITGVENGDSNDTPDRIQRRLLQLKVNGQWYTVGA
2558819..2559346                   PHAGE_Salmon_SJ46_NC_031129: holin; CEP98_13380; phage(gi100034)                     8.54e-15            SalmonellaentericasubspentericaserovarTyphimuriumMRHFKNFTKTTELTLVQQKLSENCSIQFIQDESGVDWYVLQKLFQPDTLKIQYDKTGLIIAADKDATKLFPLNCSVVEFADTDIPDGFQPGNFTYSNGVIAPVQIDYVALATAERDRRMTSVTAKINQLVEAQDDGDITAAELSELTALREYRTKLRRLALDVAPDINWPEYLNK
2559724..2560167                   PHAGE_Escher_pro483_NC_028943: tail fiber assembly protein; CEP98_13385; phage(gi971758532)     3.34e-37            SalmonellaentericasubspentericaserovarTyphimuriumMSIICFSSTSNTYFSEENIPAYKASGLWSNDFYALTDEEVDKYYMKTPPKGMYLGSSNGRIAWVCIPPPTQDDLISAANQEKKKRIDQANEHMNSRRWPGKAALGRLTGDELAQYNLWLDYLDALKAVDTSVAQNIACPIRKAIHIK
complement(2560221..2562050)       PHAGE_Salmon_g341c_NC_013059: O-polysaccharide acetyltransferase protein; CEP98_13390; phage(gi255252697)     4.38e-71            SalmonellaentericasubspentericaserovarTyphimuriumMIYKKFRLDINGLRAFALISVVLYHFGVPYVSGGFIGVDVFFVISGFLMTGIVLERVDHKGVLDFYIARFLRIVPALVFAILLLMIFGLFTLSTNEYEALSKNAISSLLFYSNNYYAIHSSYFDSSSEFNFLLHTWSLSVEWQFYILYPLLVIIVKKLRFPVGLSLSVILAMSLAITLMRVTGTKEDIFYLIPTRAWEMLAGGLVYIASVRYKMPEWIKHCEVYGIVLIVVAVVILHSNGYWPSYSALAPVLGASMVILANKQNSLFTSNRIAQWVGKISYSVYLWHWPVIVAMKHYDIEFSAINIFFGVIVSFALGDISYRTIENTLRKRVKLQFNIVLFSSTLALCLFVMFTKGVSFRFSDTLKQVVEYRMDNSPWRPDICFLNPDQDYSAFSKCQDKMTEKSFVVWGDSHAAHLMPGLKSVFGNSLNITQRTASLCPPIIGLQKDDRPYCKDINDMVAKEISDNKPTTVLMSALWPVYPMRDYLPETIKFLKDNKVKNIIIVGPFPVWKKTMIDTIEDMGINSGRTVPWSMTDETRNLRDNDKYLRELAKEHSLTYISPLETMCTESYCKAIIGNRIAYPIQYDNAHLTPEGSGWFIEEVKKQISK
2562191..2562337                   PHAGE_Entero_HK140_NC_019710: hypothetical protein; CEP98_13395; phage(gi428781967)     2.29e-15            SalmonellaentericasubspentericaserovarTyphimuriumILLVIDTSVSPRDDSLLVCIDGEEFRIKRYRTHSQSHPVNFENGKRERL
complement(2562398..2562688)       PHAGE_Klebsi_phiKO2_NC_005857: Gp22; CEP98_13400; phage(gi46402108)                  4.61e-34            SalmonellaentericasubspentericaserovarTyphimuriumMLDKPLCGDGLPAIRFLLYRSIPGYFNIDGLPGAKDIILGELTKRVHRIFPDADVRVKPMMTLPAINTDASKHEKEQISRTVQEMFEEAEFWLVSE
2562716..2563219                   PHAGE_Salmon_SJ46_NC_031129: deoxynucleoside kinase; CEP98_13405; phage(gi100082)     2.07e-66            SalmonellaentericasubspentericaserovarTyphimuriumMKQANEWIEWYVTTFRDVSTQEGETYLSAVQSKRRTIAMGFPSPASDYVETRISLDQQLISQPAATYFMRASRSHFREGIIQGALLVVDASLSACDGSLLICAIDGEFRIKRYRTHPQPHLINLENGRKEALPEDGDGYNSSHAIFGVITYIINDARNAEFDDCPVM
complement(2563350..2563426)       tRNA                                                                                 N/A                 CGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCA
complement(2563500..2565260)       hypothetical protein; CEP98_13415                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMVTHRQRYREKVSQMVSWGHWFALFNILLATLLGSRYLFVADWPTTLAGRIYSYLSIVGHFSFLVFATYLLILFPLTFIVMSQRLMRFLSAILATAGMTLLLIDSEVFTRFHLHLNPIVWELVINPDQNEMARDWQLMFISVPVILLIEMLFATWSWQKLRSLTRRRHFARPLAAFFFVSFIASHLIYIWADANFYRPITMQRANLPLSYPMTARRFLEKHGLLDAQEYQRRLVEQGNPEAVSVQYPLSNLHYRDMGTGQNVLLITVDGLNYSRFEKQMPELATFAEQNIDFTRHMSSGNTTDNGIFGLFYGISPGYMDGVLSTRTPAALITALNQQGYQLGLFSSDGFASPLYRQALLSDFSMPAAQTQSDAQTASQWIDWLGRYAQEDNRWFSWISFNGTNIDDSNQKNFVKRYASAASDVDAQINRVLNALREAGKFDNTVVIITAGRGIPLTPEENRFDWSQGHLQVPLVIHWPGTPAQRINVLTDHTDVMTTLMQRLLHVSTPANEYSQGQDIFTVPRRHNWVTAADGSTLAITTPQMTLVLNNNGHYQTYDLHGEKIKDQKPQLSLLLQVLTEEKRFIAN
complement(2565292..2565519)       hypothetical protein; CEP98_13420                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMPQLSRYSDEHVEQLLSELLSVLEKHKAPTDLSLMVLGNMVTNLINTSVAPAQRQAIANSFARALQSSISEDNAH
2565699..2566706                   PHAGE_Pseudo_H66_NC_042342: hypothetical protein; CEP98_13425; phage(gi100015)       3.59e-63            SalmonellaentericasubspentericaserovarTyphimuriumMSLDINQIALHQLIKRDEQNLELVLRDSLLEPTTTVVEMVAELHRVYSAKNKAYGLFNEESELAQALRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGIVLFCHYRYLAVEYLLVTVLNNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPQSTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEIELESLSKELSGVSEVSFSEFTAEKGYELEESFPADRSTLRQLTKYAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTSGGK

#### region 6 ####
2800477..2800489                   attL                                                                                 N/A                 TATGCAGGAAAAT
complement(2808308..2808775)       PROPHAGE_Salmon_LT2: integrase; CEP98_14615; phage(gi16766072)                       8.09e-46            SalmonellaentericasubspentericaserovarTyphimuriumMGKLGGEMKALAKHCGGSHKTVNDCIHIVQRFDHHLRALNVHIQRVAQIKVRHIESYIHERLAQGIGKRTLQNEMASLRAVLQQAGRKQVAEHEWLTNKSLGLAGASRSGTRQAITPEHYHHVLETARMKAPGLAAALELARLMGLRSQEAVQSVQ
complement(2808763..2809159)       hypothetical protein; CEP98_14620                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumVTVNLRQNPRSFAPGTQPVRHFRRAKRQSDAQPLHRAMPLFSGFRRSFPNLTRLFGAAVSKKEEKKIDTEGGADAPENFCSRRQPVPRTVNSLYLNKLPLRRKGIVLAQPKSIRRRLFVFSKSQEKCMGKLG
complement(2809071..2809253)       hypothetical protein; CEP98_14625                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMTEAIPPGTCYHISAFYFTGCGLQRRPALLPRDRQSAPESAIFRARHSTGASLSSRKATK
complement(2809250..2809723)       PHAGE_Escher_phiV10_NC_007804: putative protease; CEP98_14630; phage(gi89152430)     1.26e-52            SalmonellaentericasubspentericaserovarTyphimuriumMALTDTAGGTQTDPGTGKPSENPPAAPNKPTPPKEETPPGAPEKYAFTAPEGQELDTSALAQFEPVARELNLTQEQAQKLVDVYPKVLAGVQQQQAESWQKQTEDWAAAVKADKDIGGDKLASNLGAAQRAIDTFGTKELKEYLDGTCARSLVNAAP
complement(2809887..2809962)       tRNA                                                                                 N/A                 TCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA
2809887..2809964                   attL                                                                                 N/A                 TGGCTCCTCTGACTGGACTCGAACCAGTGACATACGGATTAACAGTCCGCCGTTCTACCGACTGAACTACAGAGGAAT
complement(2810371..2810661)       PROPHAGE_Escher_Sakai: putative integrase; CEP98_14640; phage(gi15834507)            4.59e-14            SalmonellaentericasubspentericaserovarTyphimuriumMPDQRKRPSSSLTGLASIDSKYWQSGYRFNGKQKVFSIGVYPAVSLADARQRRDEVKRLLDQGIDPNAKNRLMKKSFRKSAIKPARPVSSPKADAP
complement(2810857..2810932)       tRNA                                                                                 N/A                 TCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA
2810857..2810934                   attR                                                                                 N/A                 TGGCTCCTCTGACTGGACTCGAACCAGTGACATACGGATTAACAGTCCGCCGTTCTACCGACTGAACTACAGAGGAAT
complement(2811033..2811830)       protein MtfA; CEP98_14650                                                            N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMIKWPWKAQEITQNEDWPWDDALAIPLLVNLTAQEQARLIALAERFLQQKRLVALQGFELDSLKSARIALIFCLPILELGIEWLDGFHEVLIYPAPFVVDDEWEDDIGLVHSQRVVQSGQSWQQGPIILNWLDIQDSFDASGFNLIIHEVAHKLDMRNGDRASGIPFIPLRDVAGWEHDLHAAMNNIQDEIDLVGESAASIDAYAATDPAECFAVLSEYFFSAPELFAPRFPALWQRFCQFYRQDPSQRLRVSAAEGDYGEESEH
2811919..2812008                   tRNA                                                                                 N/A                 GGAGAGATGCCGGAGCGGCTGAACGGACCGGTCTCGAAAACCGTTGCGGGGGTAACTCCGCCGAGGGTTCGAATCCCTCTCTCTCCGCCA
complement(2812122..2813111)       PHAGE_Salmon_ST64B_NC_004313: Integrase protein; CEP98_14660; phage(gi23505472)      0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMGRKRAPGNEWMPKGVFFRPSGYYWKPGGSTENIAPADATKAEVWVAYEKKVEGRKNRITFTQLWRKFLASADYADLAPRTQKDYLAHEKYILAVFGDAEAKAIKPEHIRRYMDARGQKSRVQANHEHSSMSRVFRWSYQRGYVPGNPCVGVDKFPKPQRDRYITDEEYRAIYNNATPAVRAAMEIAYLCAARVSDVLKMNWNQILEKGIFIQQGKTGVKQIKSWTDRLRDAVEICREWGEEGPVIRTMYGERYSYKGFNEAWRKARKAAGDDLGRPLDCTFHDLKAKGISDYEGTAKDKQKYSGHKTESQVLVYDRKVKMSPTLDRKR
complement(2813113..2813355)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; CEP98_14665; phage(gi23505473)     9.11e-55            SalmonellaentericasubspentericaserovarTyphimuriumMEKQLMSDRFLTEEELEDATGASQKSLQKEVLTLNGIYFIERRDGSIRTTWYHINHPVSRLLPPAGYQPVPGMNFDAIES
complement(2813380..2813949)       PHAGE_Salmon_ST64B_NC_004313: Endodeoxyribonuclease; CEP98_14670; phage(gi23505474)     1.45e-140           SalmonellaentericasubspentericaserovarTyphimuriumMNNLMIDLETMGKKPNAPVVSIGAVFFDPQSGEIGPEFYTAVSLESAMEQGAVPDGDTILWWLRQSPEARAAICADAVSVTTALIEFNDFITCHADDLKYLKVWGNGANFDNVILRGAFERASLPCLWNYRNDHDVRTMVTLGRAIGFDPKRDMPFEGDMHNALADARHQAKYVSAIWQKLIPPTSNNI
complement(2813953..2814786)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; CEP98_14675; phage(gi23505475)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMTTITKEWLQQTIAEFENTRDDIPFGLDDDDAKILLVLKRALASLDAEPVRYLNKFSGTCVTLEQQSNAADDVAVYIPLYTAPPAPVVPEEAYSDDCPDLYASQPEAWAAGWNACRAALLHGAEPVSQTYELPQTQFEQVADLYEMQFDDGRTCAFHTDGAKAAQWLLACDGNKVQEYVRLERYHEALIGNSPVIPDDWVMVPKKLTAENGAKSLLSGEFLETTFISFPECLADEECESCDGSGRIKIEVPVRWTTIKAIWNKGVEHFRSSTATGDN
complement(2814783..2815400)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; CEP98_14680; phage(gi23505476)     2.64e-152           SalmonellaentericasubspentericaserovarTyphimuriumMSNIDKQALRERYSPKPAPECHICGAEMTIQRMSASRITYGCTGATYDDKGCHYAEGRSIADDHYEQSRVTVVDVSDPNVLALLDELDSANGYVSAYEAEKWHYHGLAESEGERADRAEKRVAELEYIATDYGVKFQKTQDALKHQALLHKSQMEAAEKQVEELTMWVKRLANSLRNTKPNSKLYGAAMDYLSRKGLISVEDVLR
complement(2815397..2815912)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; CEP98_14685; phage(gi23505477)     1.93e-126           SalmonellaentericasubspentericaserovarTyphimuriumMSNRIRNAQVFDARTGEYPVYMYIHWIIGGELDFDANYQRGYVWGHEEQQAFLNAVISGFPIGSVALAKAPDWCSRELPYIEVVDGKQRLTTLKKFITNEIPIILADGPLYWRDMTRAEQLVFGRRPLPAVVLDEVTYKDRLAYFMVVNFTGVPQSEEHKRHVMQLMEAAQ
complement(2815909..2816139)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; CEP98_14690; phage(gi23505478)     1.82e-49            SalmonellaentericasubspentericaserovarTyphimuriumMKLEMYTLDGSVIVDSNLVTQFYPDYKSGGELTVIETISATGETFTVRVKHSFLQVTSALATAWSVDEKKAEGAAQ
complement(2816210..2816749)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; CEP98_14695; phage(gi23505479)     3.55e-129           SalmonellaentericasubspentericaserovarTyphimuriumMSFIQTLSGKQFDYLSATIDDIDIEDIAVALSNICRFSGHLPEFYSVAQHSVLCSQLVSPEFAFEALMHDAAEAYCQDIPAPLKALLPDYREIEKRTDQLIRFKFGLPLEEASVVKYADLTMLATERRDLDIDDSIPWVILEGIPPTDLFEIYPLRPGQAFGLFMARFNELMELRQCAA
complement(2816886..2817713)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; CEP98_14700; phage(gi23505480)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSQLDSGTFQQVKDLVLSGYHLNDIQGLACPTALLPAGTGVESLERFALERFRFRGAMTTTSIEDFVRYSKGYASTTEKARCFIDADHMTARSVFNIGTLDNPGHADNVASVTLKQTAPFRALLQINGERLKQKQIAEWLEDWSDYLLAFDSDGKTMQISQAAQAVRRITIQQATQQDHEDGDFSGKKSLMQSIEASSKDVMPVAFEFKCVPYEGLGERAFSLRNSLLTGDEPRFVLRIVQLEAQEEAIANEFRDLLISKFDGESVETFIGNFKA
complement(2817771..2818142)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; CEP98_14705; phage(gi23505481)     9.73e-86            SalmonellaentericasubspentericaserovarTyphimuriumMNDDRMTVVPDFLGELDAGVFMNKIAAALNTVGLGVLNNGNKGKVVLTFDFERMGNSVEEKRVKIKHKLQYSTPTPRGKASEEDTTETPMWVNKGGKLTILQEDQGQLFSIKGTTDGKLKAAQ
2818240..2818425                   hypothetical protein; CEP98_14710                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMSPSRGDTLFCCVKRSASRQNTVAFLLLLEEPDADKTSHSNNVVVPGASRYLAKVARQTGA
complement(2818957..2819652)       PHAGE_Salmon_ST64B_NC_004313: regulatory protein; CEP98_14715; phage(gi23505482)     6.65e-170           SalmonellaentericasubspentericaserovarTyphimuriumMNIGNRVRQLRRAKNMKIAELAEAIGVDAANISRLETGKQKQFTEQTLSRLADCLGVDIAELFTSDPKGNTVCKHSDMRKDSANVKDLFRIEILDVSASAGNGLIQGGDVIDVIHAIEYNKDKALAMFGGRPAAELKVINVRGDSMAPTIEPGDLIFVDISINQFDGDGIYVFGFDDKIYVKRLQMIPDKLLVISDNTNYREWSITKDNECRFGVFGKVLISQTQSLKRHN
2819626..2819811                   amino acid permease; CEP98_14720                                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMSDTVSYIHAFITLIFCALCKSTCASLLYEITCDIRKRRRFYAITIEKIAEIAWLYVTARR
2819750..2819974                   PHAGE_Salmon_ST64B_NC_004313: DNA binding protein; CEP98_14725; phage(gi23505483)     7.23e-49            SalmonellaentericasubspentericaserovarTyphimuriumMQSPLRKLRKSHGYTLQHVAKGVQVDPATLSRVERCEQAPSTELAERLAQFYAGEISEMQILYPNRYQLSDSAI
2820003..2820557                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; CEP98_14730; phage(gi100118)     6.69e-135           SalmonellaentericasubspentericaserovarTyphimuriumMGHEPEWKVEKQPRWLVAAIKKTISSLHGGYEEAAEWLDVTKDALFNRLRTGGDQIFPIGWALVLQRAGGTYHLAHSVARASGGVFVPLADMEEVDNADINQRLLEAIEQITSYSQQIRVAIEDGVIEPHEKAVIDEELYQAIAKLQQHSTLVYRVFCAPEKGDARECAAPGAVASNFMEKTNA
2820554..2821711                   PHAGE_Salmon_ST64B_NC_004313: putative antirepressor; CEP98_14735; phage(gi23505485)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMNSLTVNNRLSQQPGMYEYRPLRHECRLPNSLVVRNHREHSLTVGDESCRNLTAGFGMEGDFMSMSFAGNQKLSALSICARAIRMSVLALCGNSGVILLSVKRQEHIDSAIPGRYTVQAPHKAGAGRGNPEFNIEHNRAHAVFSCHEHCYAQIMVGRAGPVSAGPGSMLTGISTPVRLTTYKVVESLGGEFIEFNIEAATMATVPTLAQPEIRIINGQAVTSSLAVADYFIKRHADVIRKIESLECSTLFRQRNFAFTSISINQPNGGTRKLPCYQITRDGFAFLAMGFTGKRAAQFKEAYINAFNQMEKQLSIPSVLSDAAHNASVLYSYISSIHQVWLQQLYPMLEKAESPLAVSLYDRINDAVALASLINMTLNRSEVRGRK
2821708..2821932                   PHAGE_Salmon_118970_sal3_NC_031940: DNA polymerase III alpha subunit; CEP98_14740; phage(gi100121)     2.03e-50            SalmonellaentericasubspentericaserovarTyphimuriumMIRNIFKRFTSQRFHCPRPGQWYSTPEGYVLRISLVDRECQKVVCEPLGRNYRVNMPLIAFRSGKNMKHLGGAA
2821929..2822747                   PHAGE_Salmon_ST64B_NC_004313: putative replication protein; CEP98_14745; phage(gi23505486)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSMELMVKAMKIRVGNPLRKLVLIKLADNASDQGECWPSYQHIADQCEISKRSVMNHIAALCESGLVKKVTRKGEKGNSSNIYLLHLDGAGDSLGGSANNSLPGAANSLGSAGVAPGGSEGDSPRTSHSFEPVKEPVNESKTIGASAYASSSVCFARQEYSPEFEQAWLAYPKRAGGNSKSAAYKAWKARLKEGVNAETMLEGVKRYAGWVSATGNSGTQFVKQATTFFGPDRHFGELWAVPAAPSPGREDPMFKSSYGNVDYSQIPTGFRG
2822707..2823231                   PHAGE_Salmon_ST64B_NC_004313: putative transcriptional activator; CEP98_14750; phage(gi23505487)     3.71e-128           SalmonellaentericasubspentericaserovarTyphimuriumMWITARSRQGSGGDMSLMGDVQKFIESHPGCTSSDIANAFADFPRKSVLQSTSKLRQCRRVAHRFEGKTRRHFALETDIQPDQEPDIGTKPVRSCYVGTNDPQVIMHLIRQAETLESGGLFRRAATVWMEAFRESHIPSERSAFLARRERCLRKSRKSVASGSEWYLSGNYVGS
2823231..2824124                   PHAGE_Salmon_ST64B_NC_004313: putative DNA methyltransferase; CEP98_14755; phage(gi23505488)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSNKYCQALAELRNKSAHELKEVGDQWRTPDLLFWGINAMFGPLTLDLFADDDNAKCPVWYTADDNALVQDWAEMLESIGGAAFGNPPYSRSQYHEKQAITGMTHIMDHTMEMREKGGRYVFLVKAATSETWWPEDADHIMFIRGRIGFDLPVWFVPADDKQKTTGAFFAGAIAIFDKSWRGERFSYISRTELEEKGKAFMSLVEFAAGKVQPPATTAPEQEEPIIAPAVLPYVDSRIWPLEVGLVFNQVEGADSLDASQQNKLKANINQLWLERMPTSEIITTAGGLVSSMRREVA
2824121..2824510                   PHAGE_Salmon_ST64B_NC_004313: holiday-junction resolvase; CEP98_14760; phage(gi23505489)     1.45e-91            SalmonellaentericasubspentericaserovarTyphimuriumMRLVLPFPPSVNTYWRAPNKGPLAGRHLISAVGRKYQSAACVAIIEQLRRLPKPSTELAAVEIILYPPDKRIRDLDNYNKALFDALTHAGVWEDDSQVKRMLVEWGPVFPKGKVEITITKFETGAGAAD
2824527..2825387                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; CEP98_14765; phage(gi23505490)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMNNLMVIDGIEVRRDVHGRYCLNDLHRAAGGEQKYRPKYWLDNKQTRELIEQLFTEGGIPPSEQNQSVSFFQGGSDTQNLGIAPVNTVRGGAEQGTYVCKELVFAYAMWISPSFHLKVIRTFDRITSAPQTSSGMAADKMQAGVILLGFMRKELNLSNSSVLGACQKLQEAVGLPNLAPQYAIDAPAGALDGSSRPTLALSALLKQHGIRMTANQAYQQLAKLGVVEHRERYSRSAINGIKKFWSLTAKGCMFGKNITSPANPRETQPHFFESKFPELLKLLDTVH
2825395..2826384                   PHAGE_Salmon_118970_sal3_NC_031940: recombination endonuclease subunit D12; CEP98_14770; phage(gi100127)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMRALLTPEIAPRMGVVLFRPGSELMPLFMQGRVLLEPEPEQFSSFASGAVPAVSQPLADDPAVRDVFCNESVIYRAGGLDSLESWLLRGNGCQWPHSDWHSEQMTTMRHAPGAIRLCWHCDNLLREQFTERLKSIAVENTTKWVLSVVCRDLGFDDMHAVTLPELCWWMVRNNLAEVLPESAARKALRMPKAIVQSATRESEIVPSVLATSIVQDKAKKVLALRVDPESPESFMLRPKRRRWVNERYTRWVKSQPCACCGKQADDPHHLIGHGQGGMGTKAHDLFVLPLCRTHHNELHADTVAFEEKYGSQLELIFRFIDRALAIGVLS
2826395..2827018                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; CEP98_14775; phage(gi23505493)     1.20e-152           SalmonellaentericasubspentericaserovarTyphimuriumMTPRQRRQHRNAIEKAAAAPRKSWLGKFRPLTSVQSAWVKSLLSVWGECYGGRTSEEAMLDCCGFWSCLQDEEWTDNEAKRITETIKGLRKIGYKGEALLSMARQILWPKQSIADLLNKEMRIEESDFVERCILSALSKDDPVFVVGIDFYARRKRVSDIGRYLQEIAPWLTRKQAEDRVRWCVNHFNCAVFLAFRDAMRKQNEKIS
2827151..2827408                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; CEP98_14780; phage(gi23505494)     3.92e-57            SalmonellaentericasubspentericaserovarTyphimuriumMQDGKQQPYFFNPGMTPEQLEDWLGQQKLHLTYYNQLVNEKAALEERLNEISAEIERMSAGGFKGKLSFLWDPSPLPRNRQQNND
complement(2827338..2827772)       PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; CEP98_14785; phage(gi557307562)     8.16e-08            SalmonellaentericasubspentericaserovarTyphimuriumMSNYSDLFQIIKIRVCQNNDFPTYSLAGTNNYRASQVWYRIGQIFTLECVLAEYRRCCSSDYYLLDNEKALHHLIFQITKWKLEDIRGLSLNDSLFIISDRLKPDYMPAEAAQFLRSLKLPVNHYSVDDFSEADWDPRENSVFL
2827934..2828278                   PHAGE_Salmon_ST64B_NC_004313: lysis protein (holin); CEP98_14790; phage(gi23505495)     1.98e-56            SalmonellaentericasubspentericaserovarTyphimuriumMKMHFDPHSWDSWIELFQSWWRGDVPIGGVVMAIVVAFFRMVYNGSSWKETLFEGLLCGSLTLTAVSALDYFDVPKSLTIAIGGTIGFIGVKKISTIISTYFSNRFGGGNPPQV
2828281..2828895                   PHAGE_Salmon_ST64B_NC_004313: lytic enzyme (putative glycohydrolase); CEP98_14795; phage(gi23505496)     1.98e-151           SalmonellaentericasubspentericaserovarTyphimuriumMNESQFQQAAGISAGLSARWYPHITAAMSEFGITAPLDQAMFIAQVGHESAGFTSLVESFNYSVDGLMKTFGKRLTPYQCEMLGRVDGKQVAHQPQIANLVYGGRMGNKDAGDGWKYRGRGLIQITGLENYTRCGVALKLDLVANPGQLELDRHAARSAAWFFVTRGCLKYSGDLVRVTQIINGGQNGIGDRRERFEKAKSVLV
2828892..2829377                   PHAGE_Salmon_ST64B_NC_004313: lysis protein; CEP98_14800; phage(gi23505497)          8.83e-114           SalmonellaentericasubspentericaserovarTyphimuriumMNLLPVLLKKYWLQLSVTLLIAVLAWTTDHYRDNAIQYKSQRDTASHSLTLANETISDMEVRQRDVAALDARYTKELADAKAENDALRDDVAAGRRRLLVNATCPAVSTGKSTSAARVDNAARPRLADSAQRDYFTLKERVTTMQKQLEGAQDYIRTQCLK
2829590..2830009                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; CEP98_14805; phage(gi23505498)     9.14e-98            SalmonellaentericasubspentericaserovarTyphimuriumMKYPTVIVNGVSVRVDEDGRYNLNDLHAAAVANGEATESQRPSNFLRSAQIKRFISALKAKAQKRALKEIQPLKVIKGGVDSGVWGVELLAIRYAAWIKPEFEIEVYEVFKTVVRLGVGAMSRLNRIDHIINTETKAIS
2830229..2830531                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; CEP98_14810; phage(gi23505499)     2.88e-69            SalmonellaentericasubspentericaserovarTyphimuriumMSELNYEAIGRCKILNEKIKALHAERMKAIGDLRSSVYSLHQKGDINRVPPELVEFDPQSLTDLVEKVSHYDSELMRAVHEYNNWCAEAGEKPVKLIKLD
2830592..2830942                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; CEP98_14815; phage(gi23505500)     4.24e-81            SalmonellaentericasubspentericaserovarTyphimuriumMPPRTPKACRVRGCRSTTTDPSGYCESHRSEGWKQYKPGQSRHQRGYGTKWDVIRARVLKRDKGLCQLCLRSGVVREAKTVDHIIPKAHGGTDTDSNLQSLCWPCHKAKTARERLK
2831059..2831562                   PHAGE_Salmon_ST64B_NC_004313: terminase small subunit; CEP98_14820; phage(gi23505446)     2.05e-117           SalmonellaentericasubspentericaserovarTyphimuriumMPHMAGTAGRSGRRPKPTARKELAGNPGKRALNKEEPVFTPINGVSPPDWFNEEDMPLASVMWELTTKELCGQGLLCVTDLAVLERWCVAYEFWRRAVKNIAKEGNTITGAMGGKIKNPELTAKKEQESEMSSTGSMLGLDPSSRQRLIGLAGQKKTSNPFLKMINS
2831559..2833292                   PHAGE_Salmon_ST64B_NC_004313: Terminase large subunit; CEP98_14825; phage(gi23505447)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSRKSYPNVNAANQYARNVVRGKITACQYVIQACQRHIDDMAAEKSKRFRYRFDKDMAEKAAKFIQLLPHTKGEWAFKRMLITLEPWQLFIVCCAFGWVQKGTKLRRFREVYTEIPRKNGKSAISAGVALYCFTCDNEFGAEVYSGATTEKQAWEVFRPARLMCKRTPLLVEAFGIEVNASNLNRPEDGARFEPLIGNPGDGASPHCAIVDEYHEHPTDALYTTMLTGMGARRQPLMWAITTAGYNIEGPCYDKRREVIEMLNGSVPNNELFGVIYTVDEGDDWTDPKVLEKANPNIGVSVYRDFLLSQQQRAINNARHAGVFKTKHLNVWVAARTAFFNLVSWQNCEDKTLTLELFEGQPCVLAFDLARKLDMNSMARLFTREIDGKTHFYSVAPRFWVPYDTVYSVEKNEDRRTAERFQKWVEMGFLTVTDGAEVDYRYILEEAKAANKLNPVSESPIDPFGATGLSHDLADENLNPVTIIQNYTNMSDPMKELEAAIESGRFHHDGNPIMTWCIGNVVGKTIPGNDDVVKPIKEQAENKIDGAVALIMAVGRAMLYEKEDTLSDHIESYGIRSL
2833304..2833486                   PHAGE_Salmon_ST64B_NC_004313: putative integral membrane protein; CEP98_14830; phage(gi23505448)     6.74e-35            SalmonellaentericasubspentericaserovarTyphimuriumMIMLILAPLVGVLGALLLAYGAWLIYPPAGFVVAGALCMFWSWLVARYLDRTQQSVGGGK
2833486..2834727                   PHAGE_Salmon_ST64B_NC_004313: Portal Protein; CEP98_14835; phage(gi23505449)         0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMFFSGLFQRKSDAPVTTPAELADAIGLSYDTYTGKQISSQRAMRLTAVFSCVRVLAESVGMLPCNLYHLNGSLKQRATGERLHKLISTHPNGYMTPQEFWELVVTCLCLRGNFYAYKVKAFGEVAELLPVDPGCVVPKLNSSWEPVYQVTFPDGSTDVLSQEDIWHVRTLTLDGLVGLNPIAYAREAISLAAATEEHGARLFSNGAVTSGVLRTEQTLSDQAYERLKKDFEERHTGLGNAHRPMILEMGLDWKSMALNAEDSQFLETRKFQLEEICRLFRVPLHMVQNTDRATFNNIEELGLGFINYSLVPYLTRIEQRINTGLVRKSKQGVFYAKFNAGALLRGDMKSRFEAYATGINWGIYSPNDCRDLEDMNPRPGGDVYLTPMNMTTKPSDGSKAGKQKDNANADETTS
2834669..2835355                   PHAGE_Salmon_ST64B_NC_004313: Pro-head protease; CEP98_14840; phage(gi23505450)      1.30e-165           SalmonellaentericasubspentericaserovarTyphimuriumMAVKPVSRRITPMQTKQRLDVPLSLKSVSDSGEFEGYGSVFGVKDSHDDVVMSGAFAASLREWSDRKALPALLWQHRMDEPIGVYTEMKEDDVGLYVKGRLLIDDDPLAKRAHAHMKAGSLTGLSIGYVLKDWEYDRSKEAFLLKEIDLWEVSLVTFPSNDEARISDVKNALARGEIPEQKKIERVLRDVGLSRTQAKAFMAGGYGALSLRDAEDVGSALNVLKNLNF
2835370..2836575                   PHAGE_Salmon_ST64B_NC_004313: Major capsid protein precursor; CEP98_14845; phage(gi23505451)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMAVDIKDVEQVAQELQQKFDDFKAKNDKRVEAIEQEKGKLAGQVETLNGKLSELENLKSDLEKELLELKRPARGAQNKVAAEHKDAFVGFLRKGREDGLRDLERKALQVGTDEDGGYAVPEELDRSILSLLKDEVVMRQEATVITVGGSDYKKLVNLGGTASGWVGETDTRSQTATSRLGLIEPFMGEIYGNPQATQKMLDDAFFNVEAWINSELATEFAEQEEIAFTTGDGTKKPKGFLAYESTEESDKARAFGKLQHIVSGEATAVTADAIIKLIYTLRKAHRTGAKFMMNNNSLFAIRLLKDTEGNYLWRPGLELGQPSSLAGYGIAENEQMPDIAADAKAIAFGNFKRGYTIVDRIGTRILRDPYTNKPFVGFYTTKRTGGMLVDSQAIKLLKIAAA
2836626..2836826                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; CEP98_14850; phage(gi23505452)     1.38e-41            SalmonellaentericasubspentericaserovarTyphimuriumMILKQDLKWSPDGLRVEIIRAGEHDDRILPARVQEIALQTGLAECETSAKSNKAVKEKKSTTSQEG
2836829..2837152                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; CEP98_14855; phage(gi23505453)     4.05e-73            SalmonellaentericasubspentericaserovarTyphimuriumMLLSVEEIKAQLRLDEDFEADERYLQLLARAVQKRTETYLNRKLYAPDETIPDSDPDGLLLQDDIRLGMLMLISHFYENRSSVTEVEKLDMPQSFGWLVGPYRYFPQ
2837149..2837553                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; CEP98_14860; phage(gi23505454)     1.28e-95            SalmonellaentericasubspentericaserovarTyphimuriumMKIRQAQTSATYLLPDPGELDQRIVIRRRVDVPADDFGVTPTYPEQIRTWAKKAQPGAAAYQGSVQIENRVTHYFTIRFRRGITADHEVLHDDISYRVKRVRDLNGKRRFLLIECEALGTDNGSDYAAESIFTR
2837525..2838037                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; CEP98_14865; phage(gi23505455)     6.51e-121           SalmonellaentericasubspentericaserovarTyphimuriumMPQKAYLHVDFVQPEELVFNRARMRRAFVKIGQVHMRDARRLVMKRGRSKPGENPSYRTGQLARSIGYYVPRASKKRPGLMVKIAPNQKNGEGNRHINGAFYPAFLFYGVRRGAKRKKGHHRGASGGSGWRVEPRNNYMTEVLDKRRSWTRYVLSRELRKSLRPQRRKKK
2838034..2838594                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; CEP98_14870; phage(gi23505456)     1.91e-136           SalmonellaentericasubspentericaserovarTyphimuriumMKLTPIIAALRSRCPRFENRVGGAAQFKAIPEAGKLRLPAAYVVPAEDVTGEQKSQTDYWQDLTEGFSVIVVLSNERDEKGQWASYDAVHDVRQEIWKALLGWEPDSQVHEIQYAGGMLLDLNRHELYYQFDFTVKYEITETDTRQQDDLDGLPDLKTLSIDVDFIEPGTGPDGDIEHHTEITFQE
2838598..2838762                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; CEP98_14875; phage(gi23505457)     2.63e-32            SalmonellaentericasubspentericaserovarTyphimuriumMFVKPAKGRSVPDPARGDLLPEGGRNVDENNYWLRREAAGDVRRTNKKVKTNGD
2838752..2840248                   PHAGE_Salmon_ST64B_NC_004313: Tail Sheath protein; CEP98_14880; phage(gi23505458)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMAISFNSIPSDTRVPLFYAEMDNSAANTARDSGASLLIGHASNDASIAVNSLVLVSSVDYARQICGAGSQLARMVGAYRKTDPFGELYVIAVPESTGAAATVALTVTGEATETGTVNVYTGRTRVQAPVTSGDDAAAVAVSIKDAVNANPDLPFTATSEAGVVTLTARHKGLYGNEIPVTLNYYGFGGGEVLPAGVNITVASGVKGAGAPALNDAVAAMGDEPFDYIGLPFNDTASVNSMATEMNDSSGRWSYVRQLYGHVYTAKTGTLSELVAAGDQFNLQHITLAGYEKDTQTPADELAASRTARAAVFIRNDPARPTQTGELVDMLPAPKGKRFTTTEQQTLLSHGVATAYVESGVLRIQRDITTYRKNAYGVADNSYLDSETLHTSAYVLRRLKSVITSKYGRHKLANDGTRFGSGQAIVTPAVIRGELGSTYRQMEREGIVENFDLFQQHLIVERNANDSNRLDVLFPPDYVNQLRVFAVLNQFRLQYSEEAA
2840248..2840604                   PHAGE_Salmon_ST64B_NC_004313: Tail tube protein; CEP98_14885; phage(gi23505459)      3.20e-83            SalmonellaentericasubspentericaserovarTyphimuriumMGKIAGTTYFKIDGQQLSVTGGIEVPMNTKVRDDVIGLDGSVDYKETSRAPYTKVTAKVPKNFPVDKITSSDVMTITSELANGQVYVLSNAWLHGEANHNPEEGTVDLEFHGEEGFYQ
2840601..2840927                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; CEP98_14890; phage(gi23505501)     2.83e-73            SalmonellaentericasubspentericaserovarTyphimuriumMIKELVLKKPIMAHNEKLHVLELREPSYDEIEAIGFPFTVSGDGGVRLDSSVALKYIPVLAGIPRSSAAQLAKLDIFKACMLILNFFTRSETEEDSESGSTTPHTSGE
2841012..2842940                   PHAGE_Salmon_ST64B_NC_004313: tail protein; CEP98_14895; phage(gi23505460)           0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMADSFQLKAIITAVDQLSGPLKGMQRELKGFQKEMAGLAIGAAAAGTAVLGALALPVNAAIGFESKMADIRKVVDGLDDKKAFAQMSDDILTLSTQLPMAAEGIAEIVAAGGQAGIARGDLMQFANDAVKMGVAFDTTAEESGQMMAQWRTAFRLTQEDVVVLADKINYLGNTGPANAKKISDIVTRIGPLGGVAGVASGEIAAMGATIAGMGVESEIASTGIKNFMLSLTAGNSATKAQKQAMAFLKLNPRKLAEDMQKDSRGAMLKVLDSLAKVPKAKQAAVMNALFGKESLSAIAPLLTNLDLLRTNFDRVADAQEYGGSMQKEYASRAATTENQLVLLKNSVNAISVTLGDTFLPAINEAAEAVMPYLEQLRTFVRANPELVQSAAKFGAALLAVGVSIGSLSRAVKILNSVINLSPAKVAIAALVAGAMLIIENWDDVAPVIKAVWQEVDNVAQEMGGWETVIEGVGLVMAGSFTVRTIGALQQSVLLAGRLSGLLGKIGRMGAMTLTIGVAVSLFKELKDLEQGAKDAGMDAGAFAVQKLQTKERERGYNGFIPRLKELLGMDTPIPQGRYQPYVPLTRRSGVLERAVPPSTQRSELKVTFENAPQGMRVTDIPKSGNPLMNISHDVGYSPFRTSR
2842974..2844314                   PHAGE_Salmon_ST64B_NC_004313: tail/DNA circulation protein; CEP98_14900; phage(gi23505461)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMAFFSSTGWRGRLRDASFRGVPFSVEDDESTFGRRVQVHEYPNRDKPWTEDLGRATRRLTINAYLVGDDYADRRDRLIGAIETAGPGTLVHPQYGEMQGSIDGQVRITHSSTEGRMCRVSFQFVESGELSFPVAGMATAKRLETSGGLFDDAIDSMFSTFSLSGISDFIQNDVIADAASMLGDVADAFRMVDSGVSAAMRLLQGDLSVILMPPGAASDFVNALQKAWRSGDRLRGSTSDLVTMIKTMSGITLDPGLSPRGTWPTDSGSAAKQKMQRNMIAAAIRTTAISTAVHAVTTLKQPRDVPGVRGVNQPAGTGRDSDIITVMHPALDGVQTVSNGSSPPNYEDLKAIRTALNAAIDQEQLRIRDDVLFQQISVMRTDLNRDISARLAQVERTALRTPDDVLPALVLAAAWYDDAGRESDILTRNPVPHPGFIPVEPLRVPVR
2844311..2845369                   PHAGE_Salmon_ST64B_NC_004313: Tail protein; CEP98_14905; phage(gi23505462)           0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMNNTVFLRVNGRDWGGWTSVRISAGIDRIARDFNVSITRQWPGGEDVPPVKNGDSVEVLIGDDLVITGWVEALPLRYDAQTIMTGIVGRSKTADLIDCSASPAQHNGENLFLIASALARPFGVDVVDAGAPAAAVIEAQPEHGETVVDCLNRLLGQAQALAYDDERGRLVLGRPGSMKAATALVLGENILSCDTERSVRERFSSYLVTGQRPGTDDDFGEATIAAIRQSTGDAGVTRYRPHTIQQSGTATTDSCKSRCEFEARQRAAKTLETTYTVQGWRQGNGELWKPNQAVVVYDPLNGFDNETLVIAEVTYSQDNNGTLTEIRVGPADAYLPEPFRPKAKKKVSEEADF
2845369..2845902                   PHAGE_Salmon_ST64B_NC_004313: putative base plate assembly protein; CEP98_14910; phage(gi23505463)     3.30e-129           SalmonellaentericasubspentericaserovarTyphimuriumMANHPLQNMITRAVITAIDTVRKCQTAGLKLIAGEKKENVEHLEPYGFTSAAQNGAEAVVLFPGGDRSHGVAVVVADRRFRLKGLARGEVALYDDQGQSVTLTRAGIVVNGGGKPVIFTNATKARFEMPIESTGDIRDNCDSSGKTMAEMRTTYNGHTHKENGDGGGITDKPGQPMS
2845907..2846320                   PHAGE_Salmon_ST64B_NC_004313: putative tail protein; CEP98_14915; phage(gi23505464)     5.35e-96            SalmonellaentericasubspentericaserovarTyphimuriumMILYVNGIRKDATASLDFLTRAVVISLFTWRRAERDDRTPQPYGWWGDTWPAVQNDRIGSRLYLLKRRKLTNKTPQDAREYMQQALAWMTDDGVAARIDVTSERTGTDTLAAGVTIYQRDGVIHNITFDDIWSKLNG
2846292..2846837                   PHAGE_Salmon_ST64B_NC_004313: putative head assembly protein; CEP98_14920; phage(gi23505465)     1.50e-130           SalmonellaentericasubspentericaserovarTyphimuriumMIYGANLMADSQFARPELPQLIATIRSDLLTRFQQDVVLRRMDAEVYSRVQAAAVHTLYGYIDYLARNMLPDMCDEDWLYRHARIKRCPRKNAVSAKGFARWDGIAGTPEIPAGTQIQRDDQVTFTTLQTVKASGGLLRVPVIADVAGTAGNTDDGTALRLGTPITGIPSTGYADTLTGGG
2846872..2847393                   PHAGE_Salmon_ST64B_NC_004313: putative tail protein; CEP98_14925; phage(gi23505466)     4.03e-122           SalmonellaentericasubspentericaserovarTyphimuriumMERYYWIPQGGADPDYVIWAKEIAGITRAWTFRHYKGTGTVGVMVATSNPVNPAPGDDLVKAVRDHILPLAPVAGGGLFVFAATEKSIPVTVALAKDTPEIRTAIIAELNALMLRDGAPSGKIYVSRISEAISLATGEVAHQLRVPAADVVLGKTELPVLGNITWATYTGENG
2847396..2847983                   PHAGE_Salmon_ST64B_NC_004313: putative tail protein; CEP98_14930; phage(gi23505467)     1.97e-143           SalmonellaentericasubspentericaserovarTyphimuriumMALQDEYTQLLYHLLPEGPAWDGENPLIEGLAPSLNRVHQRADELMAEIDPARTTELIDRYEQLYGLPDSCAPEGVQTLQQRQQRLDAKANVADGINERFYREQLDALGYTAATIEQFQNLDSTPDPEWGEFWRYYWRVNIPADANISWQTCTSTCDSAIRTWGDTVAECVIDKLCPSHTVVVFAYPEGKENAQN
2847970..2849532                   PHAGE_Salmon_ST64B_NC_004313: tail protein; CEP98_14935; phage(gi23505468)           0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMHRIDTPTAQKDKFGQGKNGFTNGDPATGRRATDLNSDMWDAVQEEVCTVIEAAGIPLSKGEHTQLHAAIGRLIDEQVKTRLEKNQNGADIPNKPLFLQNVGLGETINLAAGALQKSQNGGDIPDKKQFARTIGAVTSTTITLGESGWFKIATVVMPQATSTAVIKLYGGAGFNAGSPEQAAISELVLRAGNGSPVGITATLWRRSPSAANEVAWVNTSGDTYDIYINIGQYAYWLIAQYDYTGNANVTLHSTPEYSSVQPGNSTSGQTYTLFNSLMKPTAGDVEALSVNGGRLNGPLGIGTDNALGGNSIVFGDNDTGFKWHSDGVLGIYANNALVGYIDNSGLHMSVDVLTNGAVRAGNAKKLSLTSNNNSTMTATFNLWGDANRPTVIELDDDQGWHLYSQRNPDGSIVFTVNGDITANTLRAGGAIYQNNGDIFGSLWGNGWLSTWINNNLVLDVQLGAGTSVTTWNNAGSWPNTPGYVVTSVWKDYQGENIDGINYAPLQKRVGSQWYTVQGGTV
2849532..2850101                   PHAGE_Salmon_ST64B_NC_004313: Probable tail fiber assembly protein; CEP98_14940; phage(gi23505469)     2.01e-138           SalmonellaentericasubspentericaserovarTyphimuriumMKKYQNIKNFRLIDAPVNRDKTQAEINIGAYFLESDDGQDWYECQSLFSDDTAKIMYDHEGVIWGVVNKPVPQRGNTYSVSMLWPVNMSVAEIDAADCPDDCRGDGTWLYQDGKVVQRGYSPEELRKKAEAEKVRRLAEAESAIAPLARAVKLKIATDEEIKRLEAWELYSVMVNRVDTSAPDWPDIPR
complement(2850386..2851393)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; CEP98_14945; phage(gi23505470)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMFSRVRGFLSCQNYSHTATPAITLPSSGSANFAGVEYPLLPLDQHTPLLFQWFERNPSRFGENQIPIINTQQNPYLNNIINAAIIEKERTIGVLVDGNFSAGQKKALAKLEKQYENIKVIYNSDLDYSMYDKKLSDIYLENIAKIEAQPANVRDEYLLGEIKKSLNEVLKNNPEESLVSSHDKRLGHVRFDFYRNLFLLKGSNAFLEAGKHGCHHLQPGGGCIYLDADMLLTGKLGTLYLPDGIAVHVSRKGNSMSLENGIIAVNRSEHPALKKGLEIMHSKPYGDPYIDGVCGGLRHYFNCSIRHNYEEFCNFIEFKHEHIFMDTSSLTISSWR
2851606..2851827                   PHAGE_Salmon_ST64B_NC_004313: DNA invertase pin protein; CEP98_14950; phage(gi23505471)     3.92e-47            SalmonellaentericasubspentericaserovarTyphimuriumMFLLYCRGTGEIGGRRPKLSPEQWAQAGRLIGAGIPRQQVAIIYDVGLSIHGLYWILLSANRKGVKKRDYRAN
complement(2851941..2852156)       hypothetical protein; CEP98_14955                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMAERGGFEPPVELPLLRFSRPSQYSYLTLTYLITREKSSIFVRSIFRKLAYLSKSFSHHDRLFFKQNHLLY
2852238..2852480                   hypothetical protein; CEP98_14960                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKNVSPSYAFSARRGGQGWCYFYFSIISQLLVFCPALSPYPIWINIDVTRGDLTPSSSVIVAPGLLPDMFPCRHGRRAED
2852458..2852619                   hypothetical protein; CEP98_14965                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMGAGQKINCCEGNALARGDNLRCGTVDAVQKIWPPGWLKYAHMTIQPENLQNP
2852746..2853165                   PHAGE_Salmon_vB_SosS_Oslo_NC_018279: errror-prone repair protein UmuD; CEP98_14970; phage(gi399528789)     3.39e-40            SalmonellaentericasubspentericaserovarTyphimuriumMEFFRPTELREIIPLPFFSYLVPCGFPSPAADYIEQRIDLNELLVSHPSSTYFVKASGDSMIEAGISDGDLLVVDSSRNADHGDIVIAAIEGEFTVKRLQLRPTVQLIPMNGAYRPIPVGSEDTLDIFGVVTFIIKAVS
2853168..2854436                   PHAGE_Salmon_vB_SosS_Oslo_NC_018279: error-prone lesion bypass DNA polymerase V; CEP98_14975; phage(gi399528790)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMFALCDVNSFYASCETVFRPDLCGRPVVVLSNNDGCVIACSAEAKQLGIAPGEPYFKQKERFRRSGVVCFSSNYELYADMSNRVMTTLEEMVPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLKRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTDGVVDLSNIDRQRRLLALIPVEDVWGVGRRISKKLNALGIKTALDLSEQSTWIIRKHFNVVLERTVRELRGEPCLELEEFAPAKQEIVCSRSFGERVTDYEEMRQAVYSYAARAAEKLRGEHQYCRFISTFVKTSPFALNEPYYGNSAAVTLLTPTQDSRDIINAAVKCLDKIWRDGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRAGSAKLMEVLDHLNAKDGKGTLYFAGQGMSQQWAMKREMLSPRYTTRYSDLLRVK
2854891..2855103                   PHAGE_Vibrio_1.026.O._10N.222.49.C7_NC_049430: portal protein; CEP98_14980; phage(gi100069)     7.12e-08            SalmonellaentericasubspentericaserovarTyphimuriumMTTKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNEFRTLNENQEVEFSVEQGPKGPSAVNVVAL
2858568..2858580                   attR                                                                                 N/A                 TATGCAGGAAAAT

#### region 7 ####
complement(2962558..2963256)       PHAGE_Yersin_fHe_Yen9_04_NC_042116: L shaped tail fiber protein; CEP98_15595; phage(gi100273)     5.11e-18            SalmonellaentericasubspentericaserovarTyphimuriumMLRIIDTETCGLQGGIVEIASVDVIDGNIVNPMSHLIRPDRPITPQAMAIHRITEAMVADKPWIEDVIPLYYGSEWYVAHNASFDRRVLPELPGEWICTMKLSRRLWPGIKYSNMALYKSRKLSVQTPPGLHHHRALYDCYITAALLIDIMRTTGWTAEEMVNITGRPALLTTFPFGKYRGKAVSEVAKRDPGYLRWLFNNLDNMSPELRLTLKHYLEDVQAGEQRSNGTPQ
complement(2963280..2963936)       carbon-nitrogen hydrolase family protein; CEP98_15600                                N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMSSWKIAAAQYAPLNASPAEHVAHHLEYIELAARQQCELLVFPSLSLLGCDERNKSLPAPPDEALLQPLTHAADTHHMTIIVGMPVEHNCRFVKGIAIFAPWLTSPLMFHKSHGACIARQRSAINVVDEQPEGGDIDPSFTLFTTSQCLNEPELHASTSRLQRFSHKYALAVLMANACGSSALWNESGQLIVRADCGSLLLTGLRTTEGWQGDIIPLR
complement(2964044..2964274)       PHAGE_Pectob_ZF40_NC_019522: putative DNA polymerase; CEP98_15605; phage(gi422936677)     1.18e-22            SalmonellaentericasubspentericaserovarTyphimuriumMKTNLAQLEQAEMDKVNVDLAAAGVAFKERYNMPVVAEAVEREQPEHLRAWFRERLIAHRLASVSLSRLPYEPKVK
2964412..2964786                   CopC domain-containing protein YobA; CEP98_15610                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMASSAPSRRLALLLLASTFATPAAWAHAHLTHQYPAANAAVTASPQALTLNFSEGIEPGFSGATITGPQQELIKTRPAKRNEQDKTQLIIPLEQPLKSGAYTVDWHVVSVDGHKTKGKYTFSVK
2964787..2965662                   hypothetical protein; CEP98_15615                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMMLTFVWITLRFIHFASVMLVYGCALYGAWLAPASIRRLMTRRFLHLQQHAAAWSVISAAFMLAVQGGLMGGGWPDVFFVSVWGAVLQTRFGAVWIWQIILALVTLAVVVIAPVKMQRRLLILTVAQFILLAGVGHATMRDGVAGTLQQINHALHLLCAAAWFGGLLPVVYCMRMAQGRWRQHAISAMMRFSRYGHFFVAGVLLTGIGNTLFITGFTAIWQTTYGQLLLLKCALVVLMVAIALTNRYVLVPRMRQENPRTDLWFVRMTQIEWGVGGIVLAIVSLFATLEPF
2965679..2966032                   PHAGE_Salmon_SEN1_NC_029003: hypothetical protein; CEP98_15620; phage(gi971764937)     1.33e-11            SalmonellaentericasubspentericaserovarTyphimuriumMKKILLPALLLATSGVALAAPQVITVSRFEVGKDKWAFNREEVMLTCRPGQALYVINPSTLVQYPLNAIAEQQVAEGKTRAQPIAVIQIDNPAKPGEKMSLAPFIERAQKLCDPSNS
2966090..2966209                   hypothetical protein; CEP98_15625                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMITDKTPGFFNHLRRKLENLASSSILKGQGDLACINANF
complement(2966406..2967260)       PHAGE_Entero_HK022_NC_002166: integrase; CEP98_15630; phage(gi9634144)               2.00e-78            SalmonellaentericasubspentericaserovarTyphimuriumMSAWIDRYEVLLQRRNLSVNTYKIRSNQLATVREKMGEIILAEVTTRHIAKFLESWITEGKNTMAGAMRSVLSDMFREAIVEGHIVKNPVEATRIPEIKVARERLQLETYNATRAAAEHMPAWFPLAMDLALVTGQRREDIVNMKFSDVFDNRLYVTQIKTGMKIAIPLSLTLRATGLRLGTVIDRCRLVSRTDFMISAGIRKNSPTGNIHPDGLTKTFVKARKASGVNFSNNPPTFHEIRSLAGRLYKNEHGEVFAQKLLGHTSENTTKLYLDERDNKAYVML
complement(2967320..2967814)       PHAGE_Shigel_Stx_NC_029120: exodeoxyribonuclease VIII; CEP98_15635; phage(gi985761253)     1.21e-20            SalmonellaentericasubspentericaserovarTyphimuriumMEQDTTEHHPDPQPLENEPPVSQTEAGYQKIRAELHEARKNIPPKNPVDVGKQLAAARGEYVEDISDPNDPRWVHNNYSASNQGEKEEVVPEGKQPAAEPEAVTRNADGTFDVSALFLPPSNQTEKTEARTERDGETPKESNQQETAGDTGQEITTDGGSGTTS
2968004..2968234                   PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage endolysin; CEP98_15640; phage(gi169257182)     7.25e-38            SalmonellaentericasubspentericaserovarTyphimuriumMNGKKAFAPRSAKIRITGLENYTRCGVALKLDLVANPGQLELERHAARSAAWLFVTKGCLKYSGDLVRVTQIINGG
2968288..2968821                   PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; CEP98_15645; phage(gi16765210)     1.93e-124           SalmonellaentericasubspentericaserovarTyphimuriumMNLLSALLKRYWLQLVFILLMAGAFIAGNVWSDRGWQKKWADRDSAESSQEVNAQTAARIIEQGRVIARDEAVKDAQAQAAKSAATAAGLSATVSQLRTEAKKLATRLDAAKHTANLAAAVRSKTTNADARMLANMLGDIAEAAKHYAGIADERYRAGMTCERVYDSVRESNNYRRH
complement(2969078..2969245)       lytic enzyme; CEP98_15650                                                            N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKNIITIIVAIIIVFYAGMWSQKFLMEDECLDSGGSYNENGICNIAGSHQDVPPK
complement(2969310..2969498)       hypothetical protein; CEP98_15655                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMNKKHTNHHLLKINYIKTESYNMMMMHEKSKMRQIPRRCRPVAGRPAGSTFLKCEQLSTTTT
2969553..2969813                   PHAGE_Salmon_Fels_1_NC_010391: bacteriophage terminase, small subunit; CEP98_15660; phage(gi169257184)     1.41e-56            SalmonellaentericasubspentericaserovarTyphimuriumMDGELKNLKCNISQLAAITGLHRQTVVSRLSGVPLALGSNEKNKLYLLTDVIRVLMETPVSQAAEHQDPNKMTPKERKNWFDSEKGR
2969971..2970852                   PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage tail assembly protein; CEP98_15665; phage(gi169257205)     1.43e-89            SalmonellaentericasubspentericaserovarTyphimuriumMYIGPHGHVVIVDADGNAETFGLMDGGVDAAITAYFGSQLQERVQQNIIREYLGEQPVGTAFVIETGNSKHPWLVPAPTMRVPLIIDGTDAVYNATRAALLAIFQHNKSAGEDRKITSVALPAMGAGCGQVPPGQRRPANCTDIAPPDIPSSHIAVFDAETQTWSLQEDHRGETVYDTTTGNQVYISDLGPLPENVTSVSPGGGYKKWDSKAQVWMNDEAAEAAARLREAEGTKNRLLQIASEKIAPLQDAVDLDEATNKEKASLLAWRKYRVQVNRVDTLKPVWPEKPASSL
complement(2970949..2971149)       PHAGE_Phage_Gifsy_1_NC_010392: PagK-like protein; CEP98_15670; phage(gi169257211)     5.45e-42            SalmonellaentericasubspentericaserovarTyphimuriumMKHVKSVFLAMVLILPSSLYPALTIAADSQDHKKEETIKPMPQKWCNLWPAGIPFPEDWFKMCRGY
2971296..2971307                   attL                                                                                 N/A                 TTATATTTTATT
complement(2971340..2971456)       PHAGE_Salmon_SEN34_NC_028699: putative tail assembly chaperone; CEP98_15675; phage(gi966201445)     4.14e-06            SalmonellaentericasubspentericaserovarTyphimuriumMWLAYKNEVKLIDITNTPDNVNWPVPPGERASHDLKST
2971719..2971844                   arsenic transporter; CEP98_15680                                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMFANADSELILTPIIIAVLLAPGFSKSTTLAILHFFFRREK
2971973..2972239                   hypothetical protein; CEP98_15685                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMVLTLYEGLIEHQIYPGLFNTAYYEGNNMFSLIKSRKVLFITTLLLLSSAAQPAFALGCIGDGGSTADCAKVCSLAAGLGPLGFLICF
2972425..2972665                   Hin recombinase; CEP98_15690                                                         N/A                 SalmonellaentericasubspentericaserovarTyphimuriumLLSIWKVIWLIASSASCGHCFSTQCATTVPLHWWPAKTDAGAMGAGRVPYGRSTATAGSDYLCGAVDAVQKIPCVRVA
complement(2972992..2973606)       disulfide bond formation protein B; CEP98_15695                                      N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKTHHHPTTFVHLINQVGLLGICVALVVAFYYQLVRHELPCPICLLQRAGLIIAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTWTLITSILIIIAVAVILAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGGECAANPVTYKLLSKQDIAFLKTGLLTRTVLRL
complement(2973616..2973774)       hypothetical protein; CEP98_15700                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMFMFLPFLLALSVAMGAINRKDKVSYILWAVLLIVTILSFIHHMTNSLTLSF
complement(2973907..2974821)       protein PagO; CEP98_15705                                                            N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMRKVSISILFMLVSLTWGTTWLAMRIAVETIPPVFATGMRFMFAAPFLIIIAWLRKKTLLFPPGQRLFQFVICIFYFCIPFSLMIYGETYVNSGLAAIIFANMPVAVLIASVLFLNEKAKLMQIAGLTIAITALTGILLEETNTSTESHWQGITALISAVLIHAIIYTQCKKRSCTVSVITFNALPCLLAGLILSATGWFFERPQVSTFSVHSILATLYLGAFAGVFGILCYFALQQKANAFQASLVFLIFPLIAVSLEDYIYGYAISTHSMLLIIPLVIGIFLTLVARNLPVTSRCRDNSSQK
2975439..2975639                   hypothetical protein; CEP98_15710                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMLSPRYTTRYEDLLQVKWQVYPDFHIPDVMEPQPHRMQERAAASWRSFDSASIEWLPVAADFTCSR
2975930..2976187                   hypothetical protein; CEP98_15715                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMNLKRNINGCRKRESYSVSFFLINQLLMINNPKFPKFPKFSRISVFRAFSLYQIQIQFNISFTAKSEHHVSFIIAFIEIEFRGVL
complement(2976125..2976493)       PHAGE_Entero_HK022_NC_002166: integrase; CEP98_15720; phage(gi9634144)               8.69e-24            SalmonellaentericasubspentericaserovarTyphimuriumMKIALPLSLNLPSMGLRLSTVIERCRLVSRSEYLISAGIRKNSPNGSIHPNSLTKKFVAARKLTGINFSENPPPFHEIRSLSGRLYKDAYGEGFAQKLLGHTSENTTKLYLDERDNKAYVML
2982846..2982857                   attR                                                                                 N/A                 TTATATTTTATT

#### region 8 ####
3792255..3792269                   attL                                                                                 N/A                 GCTACATTTTTATAA
3792575..3792766                   PHAGE_Entero_mEp390_NC_019721: DinI-like family protein; CEP98_20120; phage(gi428782688)     8.12e-34            SalmonellaentericasubspentericaserovarTyphimuriumMFVELVYDKRNVEGLEGASEIILAELTKQVHQIFPDAEVRVKPMQANCLNSDTNKSDRENLNR
3793037..3793723                   virulence protein; CEP98_20125                                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMLRHIQNSLGSVYRSNTATPQGQIIHHRNFQSQFDTTGNTLYNNCWVCSLNVIKSRDGNNYSALEDITSDNQAFNNILEGIDIIECENLLKEMNVQKIPESSLFTNIKEALQAEVFNSTVEDDFESFISYELQNHGPLMLIRPSLGSECLHAECIVGYDSEVKKVLIYDSMNTSPEWQSNIDVYDKLTLAFNDKYKNEDCSICGLYYDGVYEPKPLHSSSWKDWCTIL
3793708..3794007                   hypothetical protein; CEP98_20130                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMYHFMIVNLYQDNYSGYRQHGGAEVQILSCRPKFPLKTSLSGLFFLWLNFLRGSYGVKLGNKAVEIRRNLRLIHQFAHCSVSEFINTQIFISNYCINSL
3794076..3794702                   PHAGE_Erwini_vB_EhrS_59_NC_048198: holin; CEP98_20135; phage(gi100034)               1.82e-90            SalmonellaentericasubspentericaserovarTyphimuriumMCGRFAQAQTREEYLAYLADEADRNIAYDPQPIGRYNVAPGTKVLLLSERDEQLHLDPVIWGYAPGWWDKAPLINARVATAASSRMFKPLWQHGRAICFADRWFEWKKEGDKKQPYFIHRKDGKPIFMAAIGSTPFERGDEAEGFLIVTSAADKGLVDIHDRRPLALTPETARVWMRQFLEPHSKSITYRVIPALTRPMMRKDTNPCQ
complement(3794834..3795252)       PHAGE_Stx2_c_Stx2a_F451_NC_049924: tail assembly protein; CEP98_20140; phage(gi100053)     1.45e-05            SalmonellaentericasubspentericaserovarTyphimuriumSPAQTRLSVRKEKSQSLYDWIQAQLKTLSVHAEMAKEFGYMLKQCDALSVSSAATVGWRSTTTSVKTPYGAWRWADVTICSSAQTVAARQRRSSIACWVRANTTWSPRHGYATCCGKSATGHRTGCTNCCPGTSKPNAA
3795336..3796681                   PROPHAGE_Escher_MG1655: IS150 transposase B; CEP98_20145; phage(gi16131429)          3.42e-117           SalmonellaentericasubspentericaserovarTyphimuriumMEKFSLEFKKVVSEKYLEGELSLKSVARMYGISPCTVRKWAYAYREHGISILTGKKGRYSAELKLTVVKEVVDDCFSVREVAVKHGIPAFGTVCNWLEKYRKYGEDAFIRKNKKSIPVPDKSAISAPPLPTLTKDEREELEQLRVENAYLKKLKALVQQKTLLNVQEKVSIVNELRQEWPLSRLLIVSGLPRSTFYYHVRRLAAPDRYQSARALVLKIYHQHKGRYGYRRIRLACRNEGVLLNGKTVRKLMKELGISSLIRVKKYRSYKGEQGRICDNLLKRNFDAKRPNEKWVTDVTEFKVNGKKLYLSPIMDLYNGEIISYNLATRPQPSMVQTMLTDALKQLSKDEHPILHSDQGWQYQMSRWQRWLKDSGIVQSMSRRGNCLDNAVIESFFGTLKSECYYLNEYKNVEDLKRDIIDYINYYNQLRIKEKLGGLSPVQYRLSQAA
complement(3796774..3797742)       PHAGE_Phage_Gifsy_2_NC_010393: prophage virulence determinant; secreted effector protein; CEP98_20150; phage(gi169257322)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMPFHIGSGCLPAIISNRRIYRIAWSDTPPEMSSWEKMKEFFCSTHQAEALECIWTICHPPAGTTREDVVSRFELLRTLAYDGWEENIHSGLHGENYFCILDEGSQEILSVTLDDVGNYTVNCQGYSETHHLTMATEPGVERTDITYNLTSDIDAAAYLEELKQNPIINNKIMNPVGQCESLMTPVSNFMNEKGFDNIRYRGIFIWDKPTEEIPTNHFAVVGNKEGKDYVFDVSAHQFENRGMSNLNGPLILSADEWVCKYRMATRRKLIYYTDFSNSSIAANAYDALPRELESESMAGKVFVTSPRWFNTFKKQKYSLIGKM
3797888..3798214                   PHAGE_Salmon_SJ46_NC_031129: holin; CEP98_20155; phage(gi100034)                     7.59e-23            SalmonellaentericasubspentericaserovarTyphimuriumMMTGWRDCHFTAKCRFFQGRFPRPDHPVSTPGVQFWQAEVTRQKLLNDSDNAIKDWRIELTLGIISDENKAALILPMNYINVLKSLDLTGVSDEATFTAIRWPALPQ
complement(3798218..3798799)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; CEP98_20160; phage(gi169257321)     1.16e-142           SalmonellaentericasubspentericaserovarTyphimuriumMTFKMSEQAQTIKIFNLRSDTNEFIGAGDAYIPPHTGLPANCTDIAPPDIPASHIAIFDAETQTWSLHEDHRGEMVYDTTTGNQVYISAPGPLPENVTSVSPGGEYQKWDGKAKVWVKDEAAEKAAQLRQAEETKSRLLQMASEKIAPLQDAVDLGIATDDEKARLDEWKKYRVLVNRMDTAAPDWPERPASQ
complement(3798799..3801237)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; CEP98_20165; phage(gi169257320)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMPVLISGVLKDGTGTPVQNCTIQLKACRTSTTVVVNTVASENPDDAGRYSMDVEQGQYTVTLLVDGYPPSHAGVITVYDDSKPGTLNDFLGAMTEDDVRPEALRRFEAMVEEVARQASEASRNATAAGQASEQAQTSAGQASESATAAVNAAGAAEASATQAASSAASAESSAGTATTKAGEASASAASADTARTAAAASAAAAKTSEANADASRTAAGDSAAAAAASATAAQTSAERAGASETAAKTSETQAASSAGDAGASATAAAASEKAAAASAAAAKTSETNAATSASTAAASATAASSSASEASTHAAASDTSASLAAQSSTAAGAAATRAEDAAKRAEDIADVISLEDASLTKKGIVKLSSATDSDSEALAATPKAVHAVMDEVQTKAPLDSPALTGTPTAPTPETAAAGIEIATAAFVAAKVAQLVGSAPETLDTLKELADALGNDPNFATTVLNKLAGKQPLDDTLTALSGKSVDGLIEYVGLRETINHAADALLKSQNGGDIPEKPLFVQNIGALPASGTAVAANRLASRGALPALTGATRGSDSGLIMGEVYNNGYPTQYGNILRLTGTGDGEILIGWSGTNGAPAPAYIRSHRDTADAEWSEWAMLYTSLNPPPNSYPVGAAIAWPSDATPAGYALMQGQSFDKSAYPLLAIAYPSGIIPDMRGWTIKGKPISGRAVLSQEMDGNKSHSHSARAQDTDLGTKSTSSFDYGTKSTNTTGNHTHQFGGYINSYWGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYIVRLA
complement(3801291..3801533)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; CEP98_20170; phage(gi169257319)     1.06e-53            SalmonellaentericasubspentericaserovarTyphimuriumMTMSRVISLAAGLSLSVLFSTAAVADNGRGSGNSNIENQTRIYTGTDRGQKQHREAKGKTITRSVQCSLPAYLRDPDNQC
complement(3801572..3804922)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail fiber (host specificity) protein; Lambda gp J homolog; CEP98_20175; phage(gi169257317)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSKGGGKGHTPREAKDDLKSTQQLSVIDALSEGPIVGPVNGLQSVLINNTPVVDADGNSNIHGVTVVYQVGETPQAPLEGFEASGAETVLGVEVKHDNPVTRTVVSENVDRLRFTFGVQMLQETTDKGDRNPSSVNLLIQFQRSGIWNTEFDITINGKITTQYLASVVADNLPPRPFSVRMVRVTPDSTTDRLQNKTLWSSYTEIIDIRQGYPGTAVAGLLVDAEQFGSQQVTRNYHLRGRIFQVPSNYDPDTRTYTGLWDGAFKPAYTNNPAWCTMDKLTHPRYGLGRRIGGADVDKWALYAIAQYCDQPVPDGFGGTEPRMTLNAYITTQRKAYDVLADFCSVMRCMPVWNGRKMTFIQDRPSDKAWTYTNGNVVGGRFKYSFSALKDRHNAVEVRYTDPLNGWQTSTELVEDHASQARYGRNLLKMDAFGCTSRGQAHRTGLWVMMTELLETQTVDFSVGAEGLRHTPGDIIEVCDNDYAGASVGGRITDLDISTRTLTLDREITLPESGATTLNIVGPDGKPFSTEIQSQPAPDRVVTKVLPETVQPYSIWGLKLPSLKRRLFRCVRIKENDDGTYAITALQHVPEKESIVDNGAHFDPLPGTTNSIIPPAVQHLTVSTDNDSTLYQAKAKWGTPRVVKDVRFVVRLTTGSGNEGDPVRLVTTATTSETEYAFHELPLGDYTLTVRAINGYGQQGEPASVAFSIQAPEAPSTIEMTPGYFQITVTPHQTVYDASVQYEFWYSATQLATAADIQSKAQYLGVGSFWIKDGLKPLHDAWFYVRSVNLAGKSVFAEASGRPGDDAKGYLDFFKGLITETYLGTELLKKIDLTENNASKLQQFSKEWQDANDKWSATWGVKIEQTKDGKYYVAGLGLSMEDTPDGKISQFLVAADRIAYINPANGNETPGFVMQGDQIIMNEAFLKYLSAPTITSGGNPPAFSLTPDGKLTAKNADISGHINAVSGSFTGEINATSGKFSGVIEAREFVGDICGSKVMQGVSIRATNDERSTSTRYTDSATYQIGKTITVMANCERNGGTGAITVTININGQVKTAEVMPYTAGIPAMYQTVVFSVYTTSPVVDISVSLRVRGQYTTSASVWPLVMVSRSGSNFTN
complement(3804994..3805698)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpI homolog; CEP98_20180; phage(gi169257316)     3.19e-170           SalmonellaentericasubspentericaserovarTyphimuriumMATTDTLNMAAPAMVRICLYGDLQRFGKRISLSIKTAAEGIHALAIQLPGFRQRMNEGWYQVRIAGSDMAPDTLTARLNESLPPGAVVHIVPRMAGAKNGIWQVVAGAALIGASFIPGLNAVAAAVLFSAGTSMALGGVAQMLTPVPKTPTVGQADNGKQNTYFSSLENMVAQGNPVPVLYGEMKIGSRVISQMMSTRDESTSGKVVVIGSPLQANTTSRQDGGITRPSVVIRQ
complement(3805596..3806333)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpK homolog; CEP98_20185; phage(gi169257315)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMINDDILAHARQCAPAESCGYVVRTAQGERYFPCENLSAEPTMYFRISPEDYLNARNRGDIVALVHSHPDGKPCLSSADRTLQIQSGLDWWLVCDNRIHKFRCVPHLTGRQFEHGVTDCYTLFRDAYHLAGIDMPDFDREDDWWSQGKSLYLDHLEAAGFYRVNPEDAQPGDVLICCFGSPTPNHAAIYCGNGELLHHIPEQLSKREGYNDKWQRRTHSIWRHRQWCESAFTGIYNDLESASASA
complement(3806343..3807038)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpL homolog; CEP98_20190; phage(gi169257314)     1.10e-173           SalmonellaentericasubspentericaserovarTyphimuriumMQDIPQETLSETTKAEQSAKVDLWEFDLTAIGGERFFFCNEPNEKGEPLTWQGRQYEPYPIQVQDFEMNGKGASPRPNLVVANLFGLVTGMAEDLQSLVGASVVRHQVYSKFLDAVNFSNGNPDADPEQEAVARYNVEQLSELDSSTATIILASPAETDGSVVPGRTMLADSCPWDYRDENCGYDGPPVADEFDKPTSDPKKDKCSHCMKGCEMRNNLVNAGFFASINKLS
3807128..3807661                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; superoxide dismutase precursor; CEP98_20195; phage(gi169257313)     8.32e-125           SalmonellaentericasubspentericaserovarTyphimuriumMKYTILSLVAGALISCSAMAENTLTVKMNDALSSGTGENIGEITVSETPYGLLFTPHLNGLTPGIHGFHVHTNPSCMPGMKDGKEVPALMAGGHLDPEKTGKHLGPYNDKGHLGDLPGLVVNADGTATYPLLAPRLKSLSELKGHSLMIHKGGDNYSDKPAPLGGGGARFACGVIEK
complement(3807778..3808275)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; Lom homolog; CEP98_20200; phage(gi169257312)     4.04e-113           SalmonellaentericasubspentericaserovarTyphimuriumMKKIVVAVLVGLALGSIGVANAAGYKNTVSIGYAYTDLSGWLSGNANGANIKYNWEDLDSGFGAMGSVTYTSADVNNYGYKVGDADYTSLLVGPSYRFNDYLNAYVMIGAANGHIKDNWGNSDNKTAFAYGAGIQLNPVENIAVNASYEHTSFSTDADSDVKAGT
complement(3808374..3808706)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpM homolog; CEP98_20205; phage(gi169257311)     2.39e-78            SalmonellaentericasubspentericaserovarTyphimuriumMMKTFHWKVDPDMGVDSEPQVSVVRFGDGYEQRRASGINNDLKKYSVTIRVDREDGPGLEGFLSQHNGVKAFLWTPPYGYRQIKVVCRKWSVKAGLLKTTFTATFEQVIS
complement(3808703..3811690)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; CEP98_20210; phage(gi169257310)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMDSSDLVEKRIKRCMESSARSVAASAKSISAAMAQSQVATRTQSDAMAQLAREANEARERAVDLNQKLRAEAAQAAVVAQAQDAAAAAFYRQIDSVKQLSGGLQELQRIQAQVRQAKGRGDISQGDYLALVSEAAAKTRELTDAEALATQKKAQFIRRLKEQTAVQGLSRTELLRVKAAELGVSSAADVYIRKLDTATKSTHALGLKSAMARREIGVLIGELARGNFGALRGSGITLANRAGWIEQLMSPKGMMLGGLVGGVAAAVYGLGKAYYEGAKESEEFNKQLILTGSYAGKTTGKLNEMAKSLAGNGVTQHDAAGVLTQVVGSGAFTGQAVAMVSRTAARMQENVGQSVDETIRQFKRLQDDPVNAAKELDRALHFLTATQLEQIRVLGEQGRTADAAKIAMSAYSEEMNKRAGDVHDNLGWIEKAWNAVGDAAKWAWDRMLDIGREDTLDEKIATLQEKIARARKTPWTVSSSQTEYDQQQLNELQEQKRQKDLLDAKAQAERNYQKTQKRRNEQNAALNRDNETESLRHQREVARITAMQYADAAVRNAALERENERHKKAMARQKEKPKAYYNDEAGRLLLQYSQQQAQTEGLIAAAKLSTTEKMTEAHKQLLSFQQRIADLSGKKLTADEQSVLAHKDEIALALQKLDISQQDLQHQNAFNELKKKTLTLTSQLADEESRVRQQHALALATMGMGDQQRGRYEEHLKIQQHYQEQLEQLKRDSKAKGTYGSDEYRQAEQELQASLDRRLAEWADYNAKVDAAQGDWTQGASRALDNFLAQGGNVAGMTENVFTNAFNGMADSIANFAVTGKGSFRSLTVSILADLAKMEARIAASKLLGSVLGMFVFGASAGGSTPSGAYSSAALSVIPNADGGVYRSAGLSQYSGSIVNRPTFFAFARGAAVMGEAGPEAILPLRRGTDGKLGVVAAGSGGMAMFAPQYHIAISNTGPELTPQALKAVYDLGKKAAADFVQQQGRDGGRLSGAYR
complement(3811770..3812099)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail assembly chapterone - part of G+G' frameshift hybrid protein; Lambda gpT homolog; CEP98_20215; phage(gi169257309)     1.67e-73            SalmonellaentericasubspentericaserovarTyphimuriumMNNELHFVRQLAREFRRPDWRRMLDEMSSTELSEWADFFRENSFSDALLDAEFSTLKAQVFMLVTGKEIDAADFSLLTLPGAVQSMTEQDLLEVAVGIPGGVRFEPESR
complement(3812096..3812494)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail assembly chaperone; Lambda gpG homolog; CEP98_20220; phage(gi169257308)     1.56e-91            SalmonellaentericasubspentericaserovarTyphimuriumMFLKKETFTRGDASVALFELSGLQRIEYLEFIQKRTAKYDTDMDGTTEADKRVAYMQMALEINAWLVSRSLLNGDSSQDADTLYQSVQAKWSYEALDAGAESVLMLSGLSADKKDNASDSGNESEDMTPEKS
complement(3812540..3813289)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage major tail protein; Lambda gpV homolog; CEP98_20225; phage(gi169257307)     2.32e-179           SalmonellaentericasubspentericaserovarTyphimuriumMTDTTIPNPLAPVKGANTTFWMYNSEGDPFASPLSDNNWLRLANVKDLQPGELTADAEDNNYLDDENADWKSTTQGQKSAGDTSVTLAWKPGEDVQKKLIQLFTTGQKRGFRIKYPNGTVDVFRGWVSSLGKTVQSKDEIARTVKITSVGRPYMAEEDAPEVVSVTGLTVEPTNATVKVGATTAVTFTVKPDNVTDKSLRIATSDPTTATVTQAENIATVKGVKAGTVKIIGMTTDGNFTAIADITVQA
complement(3813301..3813702)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail shaft stabilization protein; Lambda gpU homolog; CEP98_20230; phage(gi169257306)     8.79e-94            SalmonellaentericasubspentericaserovarTyphimuriumMTRHSAVRQAIIAALKKTDDGSTTFFDGRPVVVEEDELPAVAVYLSDAQYTGPEVDGDIWSAVLHVEVFLKATAPDSALDEQMENRVYPALGSVAGLGDIIRTMSAQGYNYQRDDEMAMWGSADLSYDITYSM
complement(3813699..3814265)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage morphogenesis protein; Lambda gpZ homolog; CEP98_20235; phage(gi169257305)     2.10e-134           SalmonellaentericasubspentericaserovarTyphimuriumMEVKGLKEAISVLKELDRGYVTRAKIRAINRVAKRVVSVSVRSAAALVVAGDNRRQGIPVRTVRRRARVRLARADKPFANIYVNCDPLTAIRLLSSPPSTPMRGRKGKPLRIGKYRFDRGFIAQAPNGWWQVFERSGAGRYPLNVVKIPVADALRHAFNTQVVLQMKTEMPKELKHEISYELRRFTKK
complement(3814246..3814545)       PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; CEP98_20240; phage(gi169257304)     4.66e-65            SalmonellaentericasubspentericaserovarTyphimuriumMADLFDGMKRRMDALIAERFGMKVNINGTDCIVVESDFLAELGPVEGNGKNVVVFSGNVIPRRGDRVVLRGSEFTVTRIRRFNGKPQLTLEENNGGKGA
complement(3814538..3814861)       PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; CEP98_20245; phage(gi169257303)     1.14e-69            SalmonellaentericasubspentericaserovarTyphimuriumMAKNYVEDGKTIEIVATTSLKSGDLVQVGDMFAVAVTDIAAGSAGTGIAEGVFSIPKLTTEDIAVGKKVYLKDNVVQTDATGSLPYVGVVWAPAANGDETVPVKING
complement(3814952..3817033)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage Clp protease involved in capsid processing; CEP98_20250; phage(gi169257302)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMKTTVAAIKMPPVMTAGNGRGEGSSNSWYSIRAAANNTAEVRIYDEIGGWGISARWFAEELAALGQINRINLHIHSPGGAVLDGIAIYNLLKNHPAQKTVYIDGMACSMASAIAMVGNPIIMPENAMMMIHKPRGVAGGEAEDIREYADLLDKIESVIIPIYTEKTGKTPEDIAAMLAKETWMSGAECVSEGFADKLIQPVKAMACIHSKRVEEFEHMPQSIKGMIIAPQGNAGAQPQPQAKAPESQIQSQAQSLVTVDENAIRARLQEEQRNRITGIQNVFSLSGDRYASLMAKCIADVDCSLEMAKDRLLAEMAKGITPTNQLNGPQNRAEFHAGMYTGNGNITGDAVRAAVMARAGYEEAQKDNPYNCMTLRELARISLVARGTGVSSMNPMQMIGMAFTHSTSDFGNILLDVANKSILQGWQEAPETFDAWTKKGQLSDFRIAHRVGMGGFSSLRQVREGAEYKYVTTGDKQATIALATYGELFSITRQAIINDDMNMLTDVPMKLGRAAKATIADLVYDVLISNQKLSSDNVALFDKTKHANVLEKAVMDVASLDKARQLMRMQKEGDRHLNIRPAFVLVPTAMESVSNQVIKSVSVKGADINAGIINPVKDFATVIAEPRLDDASQSTFYLTAAKGSDTVEVAYLNGVDEPYIDQQEGFTVDGVTTKVRIDAGVAPVDYRGMVKCTV
complement(3816957..3818474)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage portal protein; CEP98_20255; phage(gi169257301)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSPGWAVSRLRSRAVIKAYEAAIPTRTHKIKRENRNANQLNQIAGKSLREQARWFDNNHDLVVGALDKMEERVIGAKGIIVEPQPLTVAGTLNNALAEQIRARWAEWSVSPDVTGQYTRPVLERLLLRTWLRDGEVFSQMVAGKMPGLEPVAGVPFWLEAMEPDYVPMEQTDSTNNLIQGIYFNDWQRPKSYIVCKSWPGFATAMVATKLIDAENMLHLKFTRRLNQARGVTLLAPVIIRLLDLKEYEDSERLAARISAAFAMFIRRSDAMVQDGDAPDYADKDRDLDIEPGTILKDLLPGEDIGTIKSDRPNANLESFRMGQLRAVAAGVRGSFSSIARNYDGTYSAQRQELVEAQEGYAILQDNFIAAVSRPVYRRWLATAITAGVIDVPTDTDMATLFNAVYSGPVMPWIDPLKEANAWRILIRGGAATESDWVRARGGAPAEVKRRRKAEIDENRKLGLVFDTDPAHDPGEQDNAGSEDNSGGDKNAAGDDSRERTRGGKQ
complement(3818501..3818707)       PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; CEP98_20260; phage(gi169257300)     1.91e-41            SalmonellaentericasubspentericaserovarTyphimuriumMTRAGLQELYNAYLEAELAVLKGKSIMLNGQSMTMESLEEIRKGRREIEDRLQRLNNPRRLFTRARLS
complement(3818704..3820842)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, large subunit; CEP98_20265; phage(gi169257299)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMMTTVTKGKRKSRNSLASAVVAGCDISSMFRPPRRMKISDAVRKYMRVPRDAGNSVAWESTLTPYVVEAMNCLSSRSYDAVVFVAPARTGKTLGLIDGWISYNIVCDPSDMLVVQMTQDKAQEHSKRRLAKMFRHSPAIARRLSPHRNDNNVHDKTFRDGSFLKIGWPSINVFSSSDFKCVALTDYDRFPEDVDGEGDAFSLASKRTTTFMSLGMTLVESSPGREITDTRWKPSSPHEAPPTTGILSLYNRGDRRRWYWPCPHCGEYFQPSMANMTGYRHIADPMEASEAARIQCPHCHKLTEPQQKRELNNRGVWLREGQHIDRDGNITGEARRSRIASFWMEGPAAAYQTWAQLVYKLLTAEEEYERTGSEETLKAVINTDWGLPYQSRRSLEARSGDALMARAEDVSKRTVSDGVRFIVATVDVQGGKKRRFVVQVVGYGAYGERWIIDRYNIRYSLRVNEDGESQPVNPAARPEDWDLLKTDVLEKTYPLAADPEQFMPVLAMAVDSGGEDGVTDNAYAFWRRCKRKGVAGRVYLFKGDSTRREKLITKTYPDNTERSERRAKARGDVPLYLLQTNALKDRVAAALEREEPGANYIHFPDWLGPWFYEELTYEERSADGKWKKPGRGNNEALDLMCYAHALAILRGYERINWEKPPGWARLPEKDAAKTTQPVEVRQQEQHEGGEKAVKARKKKILPAWGGGSGGGWL
complement(3820799..3821332)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, small subunit; CEP98_20270; phage(gi169257298)     1.99e-127           SalmonellaentericasubspentericaserovarTyphimuriumMDQEIKSLELNITQLSAITGAHRQTIASRLKGVKTSGGNGSNLKIYRLVDILTAMMTMPAVTGENDPNKMKPSDRRAWFQSEMTRIELEKEMRTLIPASEVLSVYAVMAKTVVKTLEILPDLLERDAALPPDALEMTQKIIDQLREDLASMTYQACADAINGDDDDNGDEGQEEEQE
complement(3821540..3822019)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; Lambda gpRz homolog; CEP98_20275; phage(gi169257297)     8.64e-115           SalmonellaentericasubspentericaserovarTyphimuriumMFVGLLLVSLIVAGRLANHYRNNAITYKEQRDTVTHRLTLANATITDMTKRQRDVAALDEKYTKELADAKAENDALRDDVAAGRRRLYVNATCPAVPTGKSTSTARMDNAASPRLADSAQRDYFALKERVKTMQKQLEGAQAYIRTQCHGNAGKTSNQW
complement(3822037..3822489)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; endolysin; lysozyme; CEP98_20280; phage(gi169257296)     5.19e-107           SalmonellaentericasubspentericaserovarTyphimuriumMMRISEKGITLIKEFEGCSLTAYPDPGTGGDPWTIGYGWTHSVDGKPVKPGMMIDEATAERLLNTGLVGYENDVSRLVKVKLTQGQFDALVSFAYNLGARTLSSSTLLRKLNAGDYAGAADEFLRWNKAGGKVLNGLTRRREAERALFLS
complement(3822473..3822802)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; holin; CEP98_20285; phage(gi169257295)     1.42e-73            SalmonellaentericasubspentericaserovarTyphimuriumMNDKTPEFWAAVLTGLKNAWPQILGALMAGLIAYGRLIYDGATRKNKWLEGVLCGALSLCVTSALDVVGLPVSISPFVGGIIGFVGVDKLREIAISALKKRAGVNDENQ
3823078..3823764                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; GtgA; CEP98_20290; phage(gi169257294)     5.84e-170           SalmonellaentericasubspentericaserovarTyphimuriumMPTGIKPIFINNMMSTYGLSHPHDSKVFPDLPEHQDNPSQLRLQHDGLATDDKARLEPMCLAEYLISGPGGMDPDIEIDDDTYDECREVLSRILEDAYTQSGTFRRLMNYAYDQELHDVEQRWLLGAGENFGTTVTDEDLESSEGRKVIALNLDDTDDDSIPEYYESNDGPQQFDTTRSFIHEVVHALTHLQDKEDSNPRGPVVEYTNIILKEMGHTSPPRIAYEFSN
3824125..3824574                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; CEP98_20295; phage(gi169257293)     3.59e-107           SalmonellaentericasubspentericaserovarTyphimuriumMKNTALGKFIFIVGTALLLGGCSGMVMPPYATHGTSVGIIAPAGGYSEWHTDSRNHTTGDSHSQSQGNCTQSEDSQLNENGLTRTHQSNCNTRSQTHSSSTSKTRSSSVGFSVGGPVGASIGLIKQMESMNRAPANDMSSNEMFKNFGF
complement(3824710..3824835)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; CEP98_20300; phage(gi169257292)     1.23e-22            SalmonellaentericasubspentericaserovarTyphimuriumMKMHNDPHSMDSQSIFAGSQLLPMEKTSHLALSVGFRSHLA
complement(3825009..3825326)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; CEP98_20305; phage(gi169257291)     1.34e-75            SalmonellaentericasubspentericaserovarTyphimuriumMPVTLQELRTSPRRGFCFFWWYIPLVSNHRGGDMGFYYVFQYKPKGMSSGKHLNVSEEFSDRNEAKRAKSRHMINDPDCVFSGIVQADSPAAVLQEVQAESLNRL
complement(3825393..3826190)       PHAGE_Phage_Gifsy_2_NC_010393: prophage antitermination protein; late gene regulator; Lamba gpQ homolog; CEP98_20310; phage(gi169257290)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMNLESLPKYFSPKSMMPGAVPCGITSDTLTITDVMASLGLLTAKAAVGIELYLAKAGVLSSENIIAYIRQLAEQRAERHGALRKMEKGKRSKFLDTMARYVFRDYSLSAASLVTCSSCHGAKLIDAEVFTNKVTYPDGKPPKWVKDTKGISPSDWEVWKSVREQVRVVCKACDGKGHVKNECRCRGRGEILDKKKSELQGVPVYKKCPRCKGRGYPRLKDTEIFKALGVTEMVWRYNYKLFFDRLVEHCHIEESYAEKVLGNVTR
complement(3826180..3826326)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; CEP98_20315; phage(gi169257289)     1.76e-26            SalmonellaentericasubspentericaserovarTyphimuriumMKPELIEILRMRWLRLRIYRYRGSFPVAYRILRNYVRIEAKREHRNES
complement(3826323..3826934)       PHAGE_Phage_Gifsy_2_NC_010393: NinG; CEP98_20320; phage(gi169257288)                 2.03e-147           SalmonellaentericasubspentericaserovarTyphimuriumMAKLPRRKCANKECRQWFHPIREGQIVCSYQCASAVGKEQTRKAREAAQRKAQSLQRAAEKKERAAWRQRKAAVKPLKHWIDLTQRAVNDICRETELAEGLGCISCGTKTAFAWHAGHYRSTAAAGHLRFTRFNIHLQCDVYNVYKSGNIEAYRAALVERYGEAAVLALENNNTPHRWTVEELKEIRLAALADLRALKKLEAA
complement(3826937..3827143)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; CEP98_20325; phage(gi169257287)     2.05e-44            SalmonellaentericasubspentericaserovarTyphimuriumMAMKYSWFHHHDCTTEQADTLISDYQKRGVRTEKSLNPDFITWTVSAKLPEYAHRVRTPKSLRQKVWG
complement(3827143..3827745)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; CEP98_20330; phage(gi169257286)     3.55e-147           SalmonellaentericasubspentericaserovarTyphimuriumMAHELQLIKQSSGILIPATPETSEILQSKIKLGAVLVAEFRQVRNPAFHRRFFALLNLGFEYWEPTGGTISANERKLVNGYAKFLAAYGGNESALLDAAEQYLEQIANRRVTNGISLCKSFDAYRAWVTVEAGHYDAIQLPDGTLRKHPRSIAFSSMDEVEFQQLYKSALDVLWRWILSRTFRTQREAENAAAQLMSFAG
complement(3827828..3828049)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical bacteriophage protein; CEP98_20335; phage(gi169257285)     4.63e-46            SalmonellaentericasubspentericaserovarTyphimuriumMAEGVLSDLADNLRVTITDAKGIELLSFRLASGDRYILSTQNGSVTNRKLSRDDLYWSKDTIMEVVREMGSNN
complement(3828161..3828394)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage damage-inducible protein DinI; CEP98_20340; phage(gi169257284)     1.49e-49            SalmonellaentericasubspentericaserovarTyphimuriumMRIELVISRAKQLPEGAVPALEKELITCLQNQYENCNLTIRRGSQDGLSIVGAADGDKKRIQSILQETWESADDWFY
complement(3828686..3828976)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; CEP98_20345; phage(gi169257283)     3.55e-59            SalmonellaentericasubspentericaserovarTyphimuriumMNYEDKLMYQRMIFEEGKEPRLYSSQHDSKFIPISNNNGKVQKVPVMEFKDTRGDVFYAYNYAYSGKKPSNDEIYKAIDELKPIGEKFEMSKTISD
complement(3829054..3829365)       PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; CEP98_20350; phage(gi169257282)     7.84e-70            SalmonellaentericasubspentericaserovarTyphimuriumMSNIDKRALREVAERATPGNWRRTSSLFNGITVTPFSLCGEEVTLAHTVEKRDAEFIAAANPATVLALLDVLYEFGEDEVAISEYVTNLEDALRVAAAPQQEE
complement(3829362..3829709)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; CEP98_20355; phage(gi169257281)     1.01e-79            SalmonellaentericasubspentericaserovarTyphimuriumMARPKTQSERMIILERIIGLVKEQGRITTNDVVAIFGVHRTTAEKYLRIALERGGFIRHGRCGIFRDQRAVIDYDLRRYSSSQVTGFSALPVLEKSPVMQVYGASKMSINKGGAQ
complement(3829720..3830469)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA replication protein; CEP98_20360; phage(gi169257280)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMKNVIGTGSALDRLKRIIPASVQPKFSTADEWRAWQEAEGRKRSEELDRMNQKSRTEKIFGRSGIQDLHRSCTFANYEVSGEGQRKAYTMAKSYAQNFGSGFASFVFSGGPGTGKNHLAAAIGNHLLAGGHSVLVVTIPDLMLRVRECYDGGQSEASLLDDLCKVDLLVLDEVGIQRGSSGEKVILNQVIDRRLSSMRPVGVLTNLNHEGLLDSLGTRVIDRLQMDGGMWVNFDWESYRKNVSHLRIVK
complement(3830472..3831455)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA replication protein; Lambda gpo homolog; CEP98_20365; phage(gi169257279)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSMSNTAEIYKFPAPIPTQQECRMADLENGYLRLANQIQDALCIVELSGREFRVLNAIIRLTYGWSKKSDRIANSLIADKTTLKVKHVSEAVLSLAYRNIIILRRIGQTRYIGINTNLDKWAYSKPHCSKCPVSFPDDEIATWIISVPETRDSYPRKGGRASPKTGIVIPENRDSVLPHSAIPENGDSYPRKEGRASPKTGNTKDIIPKTNIKDLTPFNPPKGKVKFDPLSIPVPEWLNAASWNEWVTYRQQSGKPIKTELTVTKAFRLLKECLDEGHDPVNVINTSIANGYQGLFKPKFALNDRRAGRDVNHISAPDKTIPTGFRG
complement(3831540..3831914)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage transcriptional activator; Lambda gpCII analog; CEP98_20370; phage(gi169257278)     6.23e-72            SalmonellaentericasubspentericaserovarTyphimuriumMAYQAKRHQPNNHRGYLPMENAIARKLDPPEINPIEIESVLLNRLASVGQKSYAEHMGISESTVSRRKAEGYFCNMAKELAFLGIQAAPPEAVLVSRNYLTAVEILADAGLKAERARPDALGWD
complement(3831880..3832119)       PHAGE_Phage_Gifsy_2_NC_010393: putative bacteriophage regulatory protein; Lambda gpCro analog; CEP98_20375; phage(gi169257277)     2.12e-53            SalmonellaentericasubspentericaserovarTyphimuriumMDNQLKIKISNHMTQMSIGEHFGISSQAVGKWLRKGVIPPRRILPLCEILEWKVTPHEIDPAAYPNPTDGLPSQEASAK
3832239..3832649                   PHAGE_Phage_Gifsy_2_NC_010393: putative bacteriophage regulatory protein; repressor; Lambda gpCI analog; CEP98_20380; phage(gi169257276)     5.20e-96            SalmonellaentericasubspentericaserovarTyphimuriumMNKNLHPIFAKRIQQVLDENGWSMADLSRRVMLSHTSVRKWASGTSVASGERLKRLSAVTGRPEYWFFMEPGDESEGERAEPKPRVLDEKEETLLSLFNQLPEAEKLRVILHTKAVLQEMDLLKNNVFDLINDLKK
3832699..3832959                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; CEP98_20385; phage(gi169257275)     8.25e-20            SalmonellaentericasubspentericaserovarTyphimuriumMLQNRTFSCTFCFTNRTFGFIVSFIDNKRIVVRCKTFRWPAIRQTRVRMIDFARRPARQQAVPLNRIEVLIRRLCYLLAQKGDPDA
3832952..3833110                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; CEP98_20390; phage(gi169257274)     2.60e-31            SalmonellaentericasubspentericaserovarTyphimuriumMLKQCGYCRKSIDEGKEVKNTLLYRNGSQLASKEKEYCSRQCAEYDQMAHES
3833132..3833431                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; CEP98_20395; phage(gi169257273)     9.36e-52            SalmonellaentericasubspentericaserovarTyphimuriumMKNSPLIWRGFIHPEFKTGEIMEIVKIEMNLKAVNKSIALFNCENLDGGYVLGKFDSPHCAVKAISLLTVKVSDGEQAGFGNYRSYKLDYSEKFYQTIH
3833558..3836443                   PHAGE_Phage_Gifsy_2_NC_010393: putatitive bacteriophage exodeoxyribonuclease VIII; CEP98_20400; phage(gi169257272)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSGTNPVFLVRKAKKSSGQKDAVLWCSDDFEAANATLDYLLIKSGAKLKDYFKAVATNFPVVNELPPEGELSLTFCDYYQLAKDNMTWTQIPGVTLPSSEAAAAARQHIVDGVDTETGEVLEDHTENFGNESNSPAQATAPAPELTVVATMPLRHRVLAQYIGEGEYLYHVDASQKKEILRLEMDTDNSYVQNLLLAAENVEAFKKAIEHDIHKIVNAVKKVFPVDGKTPELATVIQFLKTWFETEHIDRGLLVKEWAKGNRVSAIQRTESGANAGGGNKTDRNPDYEHTLDTLDVEIAMATLPMDFNIYELPGSVYRRAKEIVKKKESPFKEWSAALRATPGILDYSRAAIFALIRSAHPEFYHYPGRLQGYINANLTETDHENPTEEALTAARHTPEKDAVEEANRQLAAARGEYVEGISDPNDPKWVKTGTSQPTTEPELVKNVGNGIFDVSALMQNSSTHGTETNPETTSNVQVQKADSDEKQAGDAVQAGEDDLGTGKEAVTVENQNQAEAQQNVPESQQEEPEAAWPEYFEPGRYEGVPNEVYHAANGISSTQVKDARVSLMYFNARHVEKTIVKERSPVLDMGNLVHALALQPENLEAEFSVEPEIPEGAFTTTATLREFIDAHNASLPALLSADDIKALLEEYNATLPSQMPLGASVDETYASYEQLPEEFQRIENGTKHTATAMKACIKEYNVTLPAPVKTSGSRDALLEQLAIINPDLVAQEAQKSSPLKVSGTKADLIQAVKSVNPAVVFADELLDAWRENTEGKVLVTRQQLSTALNIQKALLEHPTAGKLLTHPSRAVEVSYFGIDEETGLEVRVRPDLELDMGGLRIGADLKTISMWNIKQEGLRAKLHREIIDRDYHLSAAMYCETAALDQFFWIFVNKDENYHWVAIIEASTELLELGMLEYRKTMREIANGFDTGEWSAPITEDYTDELNDFDVRRLEALRVQA
3836406..3837563                   PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; CEP98_20405; phage(gi169257271)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMCAALKRCAYRHKGKIMENTNIVTTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAIVMQAMQWGMNPYAVAQKTHLVNGVLGYEAQLVNAVIASSSAIHGRFHYRYGGDWERCTRTQEITRDKNGKNGKYTVTERVRGWTDEDEIGLFVQVGAILRGESEITWGEPLYLSGVVTRNSPLWVSNPKQQIAYLGVKYWARLYCPEVILGVYSPDEVEQREEREINPAPVQRMSVQEITSEVSTRTSAQESAANVDAVADDLRERIDTASSVDQAKAIRADIESQKALLGTALFTELKNKAVKRYYQVDAQNKVEAVINSIPNPGEPEAAEMFAKAESTLGAAKRHLGDELHDKYRVTLDDMKPEYIG
3837606..3837845                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; CEP98_20410; phage(gi169257270)     1.91e-52            SalmonellaentericasubspentericaserovarTyphimuriumMRLINRSKQSPLGRRACDVALAAHHEKFGDYGRQKHVTNYTVVVDGVKVPVEVVNRATSYVATAMIGVRKLRNLPAQAN
3837886..3838134                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage excisionase; CEP98_20415; phage(gi169257269)     2.25e-55            SalmonellaentericasubspentericaserovarTyphimuriumMSNIIQLTPNKWVSEKVLIAVTGLKPGTITRARKESWMLGREYLHISPDGNPKPSSECIYNREAVDQWIEAQKKNQPGAKTT
3838179..3839471                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage integrase; CEP98_20420; phage(gi169257268)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMANASYPTGVENHGGSLRIWFLYKGKRVRENLGIPDTAKNRKIAGELRSSVCFAIRMGNFNYVEKFPNSPNLARFGQDRKEITVLELTERWSELKRMEISSNTMSRYESIIKNMLPLIGENKMVSAVTTEDLLYVRKELLTGFQVMKKDHRTQVKGRKSSTVNNYMMLMAEIFQFGTDNGYAKENPFSGINRLKKAKGEPDPLTTDEFIRFIQACGHQQMRNLWSLAVYTGMRHGELCGLAWEDIDLHAGTIIVKRNLTQTDEFTLPKTDAGTDRVIYLIQPAIDALRNQAQLTRLGRQFEVEVKLREYGQSVIQPCTFVFSPQCVKRGPRTGYHYAVNSINKIWAPIIKRAGIRYRNAYQSRHTYACWSLSAGANPNFIATQMGHTDAQMVYKVYGKWMSEKSAEQVSLLNQALFRYAPSLPQSMVAAQ
3839506..3839520                   attR                                                                                 N/A                 GCTACATTTTTATAA
3839666..3840868                   PHAGE_Agroba_Atu_ph07_NC_042013: hypothetical protein; CEP98_20425; phage(gi100242)     2.96e-49            SalmonellaentericasubspentericaserovarTyphimuriumMTQFASPVLHSLLDTDAYKLHMQQAVFHHYYDVQVAAEFRCRGDDLLGIYADAIREQVDAMQHLRLLEDEFQWLSGLPFFKPDYLNWLREFRYNPAQVCVTNDNGKLNIRLTGPWREVIMWEVPLLAVISELVHHYRSPNAGVDQALDALESKLVDFTALTANLDMSRFHLMDFGTRRRFSREVQQAIVKRLQQESWFVGTSNYDLARRLALTPMGTQAHEWFQAHQQISPDLATSQRAALAAWLNEYPDQLGIALTDCITMDAFLRDFGIEFASRYQGLRHDSGDPVAWGEKAIAHYEKLGIDPLTKTLVFSDNLDLPKAVELYRHFASRVQLSFGIGTRLTCDIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFDLPQVRKAS

#### region 9 ####
3910387..3911642                   PROPHAGE_Escher_CFT073: transposase insF; CEP98_20715; phage(gi26249410)             2.53e-39            SalmonellaentericasubspentericaserovarTyphimuriumMMTEFKRTQRDYPLSFKIAVVEQVEKGEMTYKQAQQRYGIQGRSTVLVWLRKYGRLDWRPGLPDLVKRKLPVAQTTIPLTPEQRIRELEEQLELANQKAEFFESVINVLKNDYGVSVGKKAARQVLTQSQAPKITVTRACQFLGHSRQAWYQYNTRCNKRQEHHAQVLDFVARTRCRQPRIGTRKLHYLLNMQADKTLNIGRDRLFNLLGEYRLLVPVKRAYHKTTNSHHRFYRHPNLLKPGPEQVTALEPEQVWVADITYLPLRSGTACLSLVTDACSRKIVGYHVGENLQTENVVKAFRQALRRRKTTGPLVHHSDRGLQYCSVLYQSVHERNGITCSMTDGYDCYQNALAERINGILKNEFLLSRPADLEQAREIVKESVAIYNHERPHLALKYKTPDDVHQAFYRQKTVNLYQD
3911661..3911885                   hypothetical protein; CEP98_20720                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumRGDENTRPGFDTKTPGAFLNRACSGPEGARPRDGLSSGAASWTNDEPARRLPEGRAQRVNPPSPPYSRKSSYEST
complement(3912105..3912563)       PHAGE_Hypert_2_NC_014321: IS element Dka2 orfA; CEP98_20725; phage(gi300116744)      2.36e-18            SalmonellaentericasubspentericaserovarTyphimuriumMGDEKSLAHTRWNCKYHIVFAPKYRRQAFYGEKRRAVGSILRKLCEWKNVRILEAECCADHIHMLLEIPPKMSVSSFMGYLKGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTAKIQDYIKHQLEEDKMGEQLSIPYPGSPFTGRK
complement(3912520..3912702)       hypothetical protein; CEP98_20730                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMENPQLGWGFRKAFSFKPVIKTPFDLLKHLAVWQLQKFNKKSKGGPNGGRKELSAHPMEL
complement(3912755..3915031)       PROPHAGE_Escher_EDL933: ATP-dependent Clp protease ATP-binding subunit; CEP98_20735; phage(gi15800640)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDIVNFISHGTRKDEPSQSSDLGNQPTGDEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSVEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDNAIEALTEAIKMSRAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNLLLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMGEIKKVFTPEFRNRLDNIIWFDHLSGEVIHQVVDKFIVELQAQLDQKGVSLEVSQEARDWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNALTYDFQSAQKHKPEAAH
complement(3915062..3915382)       PHAGE_Pectob_CBB_NC_041878: hypothetical protein; CEP98_20740; phage(gi100319)       6.69e-08            SalmonellaentericasubspentericaserovarTyphimuriumMGKTNDWLDFDQLVEDSVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA
3915706..3915927                   PHAGE_Vibrio_1.026.O._10N.222.49.C7_NC_049430: portal protein; CEP98_20745; phage(gi100069)     8.53e-11            SalmonellaentericasubspentericaserovarTyphimuriumMETGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVRFDVHQGPKGNHASVIVPIEAEAVA
complement(3915882..3916076)       hypothetical protein; CEP98_20750                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMRWQGSNLADVICRPDKMQQCRHQALALNKNASRSGWHFASWMYTMRQRSYATASASMGTMTLA
complement(3916057..3918003)       PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; CEP98_20755; phage(gi371496158)      3.81e-46            SalmonellaentericasubspentericaserovarTyphimuriumMTALLELCNVSRSYPSGEEQVAVLKDISLQIHAGEMVAIVGVSGSGKSTLMNILGCLDKPTSGTYRVAGRDVSTLDPDALAQLRREHFGFIFQRYHLLSHLTAAQNVEIPAVYAGIERKKRQARARELLLRLGLSDRVDYPPSQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILRQLRDRGHTVIIVTHDPLIAAQAERIIEIHDGKIVHNPPAQEKKREQGVDAAVVNTAPGWRQFASSFREALSMAWLAMAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRAMGTNTIDIHPGKDFGDDNPQYRQALKYDDLVAIQKQPWVNSATPSVSKSLRLRYGNIDIAVNANGVSGDYFNVYGMSFREGNTFNAVQQQDRAQVVVLDANTRRQLFPNKANVVGEVVLAGNMPVIVIGVAEEKPSMYGNSNLLQVWLPYSTMSDRIMGQSWLNSITVRVKDGVDSDQAEQQLTRLLTLRHGKKDFFTWNMDSVLKTAEKTTYTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGISLSMFIAFMLQLFLPGWEIGFSLTALASAFLCSTFTGILFGWLPARNAARLDPVDALARE

#### region 10 ####
4270289..4270300                   attL                                                                                 N/A                 TGTCCAGGTTAT
4275252..4276106                   PHAGE_Bordet_vB_BbrM_PHB04_NC_047861: exonuclease; CEP98_22600; phage(gi100048)      4.61e-07            SalmonellaentericasubspentericaserovarTyphimuriumMDALSRLLTLNAPQGSIDKNCPLGGDWQLPHAAGELSVIRWHTVTQGEAQLEMPTGDAMTLTPGKVVILPQNSAHRLRQSGESPTHIVCGSLRLHTTSRYFLTALPEVLCLAPPPHSPASIWINATILLLQQESERHLPGADVLYSQQCATLFTLAVRDWLSQAGTAKSVLNLLLHPRLGRVILHMLETPAHPWTVETLAQRVHMSRASFAQLFRDVSATTPLAVLTTLRLQIAAQTLSREVLPVMVIAESVGYASESSFHKAFVREFGCTPGEYRKRVSALGR
complement(4276157..4276336)       cation transporter; CEP98_22605                                                      N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMRPKAMTVAVIIAGLLPVLWGTGAGSEVMSRITAPLLSLFIIPAAYKLMWLRRHRRLAA
4276445..4276774                   sensor histidine kinase; CEP98_22610                                                 N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMLRRAISNLLSNTMRYTPPGKTITLRIKEADDQIHIIVENPGTPIAPEHLPLLFDRFYRVDPSRQRKGEGSGIGLAIVKSIVTAHRGKISVTSDTRATRFILTFPKHLR
4276974..4277219                   copper-binding protein; CEP98_22615                                                  N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMESRQLSATAHEMMNNGDAFAHQQMAQTQKPSAPATVENATSFSEMDDYEKAMVIHSMNNAHSFSHEIQAEEHHKQIKRN
complement(4277308..4277380)       tRNA                                                                                 N/A                 TTGTTGTTAGCTCAGGTAGTTCCAGGAACATCTAAGCCGTGGGTCGCAGGTTCGAATCCTGCACGGCGCGCCA
4277642..4278004                   PHAGE_Entero_UAB_Phi20_NC_031019: recombination protein; CEP98_22620; phage(gi100049)     1.82e-79            SalmonellaentericasubspentericaserovarTyphimuriumMLKLFAKYTSIGVLNTLIHWGVFAFCVYGMHTHQALANFSGFVIAVSFSFYANARFTFNASTTTLRYMMYVGFMGTLSAVVGWMADKCSLPPLLTLVTFSAISLICGFIYSKFIVFRDAK
4278001..4278927                   PHAGE_Entero_UAB_Phi20_NC_031019: exonuclease; CEP98_22625; phage(gi100048)          0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPLVIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKRSDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSREVVENIKQMPERNLFMKGVLSWVGGKTDVVEYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMSFLYGAWMIIDKLIFGNNVPGYPSLLVSVLFLGGVQLIGIGILGEYIGRIYIETKKRPKYIIKNEKKNG
4278908..4280560                   PHAGE_Salmon_epsilon34_NC_011976: GtrC; putative membrane protein; CEP98_22630; phage(gi221328637)     4.82e-102           SalmonellaentericasubspentericaserovarTyphimuriumMRRKMVNNRLKMVIAILIVFSLVYSIGFITPMNSDDYTYALRELSLSSVKMHYLGWSGRVVSDTISTSLLKFFSPHIYNAINSAALTLMVLCWTMIPATLTKSSPSPYVMIFLFFLYFVANPALGQTNFWLVGSANYLWTNMFIAIYILISIYLSNGKKSNLILFVYAISSIFAGCSNENTSLVVVLISVAYFFIMNRNKYLLIGVFGSAIGAGVLLLAPGNLSRASTIQDWYNQPLAWRVLEHFSERLPSAMGAYWQVYIAFIILLISVVLSRNSSSKLMFGSFLFMLGAIAANVAFLASPAMPSRALNGALCFMILSISFVAHSAFTKFNKASIYLSVTTYAMAFLYFIPSYILYYSSIKSISKQTEIREEIIDRAKHNKQDQAIIPDYYFPPVLHAGPSLDTFNSEAMSRYYGIDLKITAPGFFDYSRAFNFKPLNINAKICNNVYIKSLWIYKQQMGIKTFVIFEFNKNPADSLDENTAMFISFKTKDGKIINADVDKKTFQIDGRWLSGRAINGIDSNELESITSGTWDVRTGARTNENITEIIK
4280947..4281614                   PROPHAGE_Xantho_33913: ISxac3 transposase; CEP98_22635; phage(gi21231087)            1.66e-13            SalmonellaentericasubspentericaserovarTyphimuriumMSGKRYPEEFKIEAVRQVVERGHSVSSAATHLDITTHSLYARIKKYGSNSSTNKEIKSSQMIRPESADSRKSSGLLTSGTYKKKPQIQLVTATMNDKRSPECASDGRVATSPAMNGSRSNRTDWRAEAVVATVMTMRLQKAFSSYSVNGRKRSTERETKPEAIFLITKCFITVDAGMVRASRCHRLNMKTYIINDSEVSRLSVVIHRYAHLAPAA
4281566..4281577                   attR                                                                                 N/A                 TGTCCAGGTTAT
4281583..4281771                   PHAGE_Salmon_BTP1_NC_042346: hypothetical protein; CEP98_22640; phage(gi100018)      6.61e-15            SalmonellaentericasubspentericaserovarTyphimuriumMIHRYAHLAPNHLTEHARKIDDIFGDDVPNMSHMENKEEIKKRNTLIYKWRALQDSNLRPTA
