gi|00000000|ref|CP022071.2|  Salmonella enterica subsp. enterica serovar Typhimurium strain 93862, gc%: 53.11%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
complement(21999..22322)           PHAGE_Escher_HK639_NC_016158: DNA pol III theta; CEP99_25250; phage(gi356870660)     4.70e-22            SalmonellaentericasubspentericaserovarTyphimuriumMSGLNLAATTKEEQDKVAIDLVASGVVYKERLAMPVVAELVVREQPEHLREYFRARLEYLRNSRTRMPRNMPEKRMRLKNSAIPDAFCLSLAGFYACRVMFFSGRGV
complement(22558..22992)           hypothetical protein; CEP99_25255                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMYGTVSTICCDLLKVYENHEKIAVIIWCEGDVREMGAEFNPTADDIQAVLRAIGESDSDALWRDGIGQNFVEGVLRELVALRPPRQIAVPEDVLRTLLPLMEAGMNLPRYQTQDRAAEEETALDTLRYLLSTNIPAHNLTEGNY
complement(23059..23493)           PHAGE_Pseudo_YuA_NC_010116: hypothetical protein; CEP99_25260; phage(gi162135127)     2.72e-17            SalmonellaentericasubspentericaserovarTyphimuriumMQYSNQQRARVINVEESDRLSFLPYMFGNDFMLAELQLYALAKKWMPEYNGGFWHFIRLPEGGGYMMPDCDRVHMINGENWFDRTVSADAAGIILTSLAINRRCWTHHDCGNAALTRLYMLRDTQLWNHITFHPECNAIYAALD
complement(23506..23812)           DUF1472 domain-containing protein; CEP99_25265                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumLPAVALWFSTLTVLCRVRAVPCIHRSRAVVDTRVKCTRRSPGPSFTSAAIFRSFDRSGFTVSPFSSRLPCASGCGFPCALASTIDRPTGMDARHRPVSRNMT
complement(23989..24753)           hypothetical protein; CEP99_25270                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMRNTLSTLIVRHGDNLLRRSGWPETVGVTQVAPGVVPGWLAVCGVLSAAEILALTTHLCQPLNYGRAQLLTASAQRLAGTPVRLHLYPVQAYPHPATVRECTEIRLPYAQEWLTTDEYADLLAFLKASADRVCEIVRQDTKRIAAALAPSGESRLMEKRIGNWRLLADEYDHDNWLDEEDEDGLDKVLDAVLVRNARFCPVLLTLVNEPEEEIEAAGVITDCLRFPGEPNRRWLDRRVLRDVVNEARSFTGNIR
complement(24825..25238)           DUF1380 domain-containing protein; CEP99_25275                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMMYGTRKELNSKLKRMFGNDERFALLIWTKQDVMSLTQAMTEVEADAILREIGRKGMGEHTGDGISDSTVQALYAGLRTEIPTVSVPADLLARVTNIAGRALDTEDAQAWPLVCQEYPGVADAQVDIARLRQLALAA
complement(25294..25515)           PHAGE_Entero_N15_NC_001901: gp50; CEP99_25280; phage(gi9630517)                      3.61e-06            SalmonellaentericasubspentericaserovarTyphimuriumMNYSGHEKLRAEVAALANSMCDLRATLKVLEERYHWQRHGLTERLAGQSLRRINTLLDEAYNESLMLNECFKD
complement(25515..26195)           PHAGE_Faecal_FP_Mushu_NC_047913: hypothetical protein; CEP99_25285; phage(gi100026)     1.60e-28            SalmonellaentericasubspentericaserovarTyphimuriumMSRLILGNCVDIMSGFPERAVDFILTDPPYLVGFRDRSGRSIAGDRTDEWLQPACNQMYRVLKKDALLVSFYGWNRVDRFMAAWKSAGFSVVGHLVFTKNYSSKSAYVGYRHECAYVLAKGRPALPQNPLPDVLGWKYSGNRHHPTEKPVTSLQPLIESFTHTNAIVLDPFAGSASTCVAALQAGRRYIGIELMEQYHKAGIERLTAVQRAMQRPAANDVFYPEAA
complement(26340..26528)           hypothetical protein; CEP99_25290                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMSRSSSFFGASAGGAGATLPVVSIPRPAGHGTGDFSAPAGRCRYYAPGTRLLMNALQAAFAA
complement(26577..26933)           hypothetical protein; CEP99_25295                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMDNNSNINDTWLVGLSVDVNGTEMMVHYLVSATDLEHAEAGVLQMGRTWWPSLKREDDRHRWEYETGVVWFNSIILLDDVENSILRGLKFLDAWTVTGSTDAPVLRDEWGNDWRDITR
complement(26926..27396)           hypothetical protein; CEP99_25300                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMFRVTCIDLENGEFALYINGHYLSSEDGSGEKLYLGDILERLSRLPGVTTETVERPVPDSDEWSWNDVADSVFPACITLSRNMTVAAFKQRLSRFPDDALCCGTFWLASDFLALDSSLTEDDIDAAMELAQHCHDANDGFNWSHLQWAIDEVKRGG
27907..28329                       PHAGE_Cronob_ENT39118_NC_019934: protein umuD; CEP99_25305; phage(gi431811072)       5.58e-26            SalmonellaentericasubspentericaserovarTyphimuriumMLLLVAPEQEPVQSTAPLFTERCPAGFPSPAADYTEEELDLNAYCIRRPAATFFVRAIGDSMKEMGLHSGDLMVVDKAEKPMQGDIVIAETDGEFTVKRLQLKPRIALLPINPAYPTLYPEELQIFGVVTAFIHKTRSTD
28329..29603                       PHAGE_Cronob_ENT39118_NC_019934: DNA polymerase; CEP99_25310; phage(gi431811050)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMFALADVNSFYASCEKVFRPDLRDRSVVVLSNNDGCVIARSAEAKKLGIKMGVPWFQLRSAKFPEPVIAFSSNYALYASMSNRVMVHLEELAPRVEQYSIDEMFLDIRGIDSCIDFEDFGRQLREHVRSGTGLTIGVGMGPTKTLAKSAQWASKEWSQFGGVLALTLHNQKRTEKLLSLQPVEEIWGVGRRISKKLNTMGITTALQLARANPTFIRKNFNVVLERTVRELNGESCISLEEAPPPKQQIVCSRSFGERVTTYEAMRQAVCQHAERAAEKLRGERQFCRHIAVFVKTSPFAVTEPYYGNLASEKLLIPTQDTRDIIAAAVRALDRIWVDGHRYAKAGCMLNDFTPTGVSQLNLFDEVQPRERSEQLMQVLDGINHPGKGKIWFAGRGIAPEWQMKRELLSPAYTTRWADIPAAKLT
complement(29685..30662)           PHAGE_Escher_RCS47_NC_042128: portal protein; CEP99_25315; phage(gi100069)           7.48e-111           SalmonellaentericasubspentericaserovarTyphimuriumMMSNERRKTIGRQLNTQASMVEMTDTQRSQVFTLKTGRKITFRFVQVPASDVESKTFVNQETNGRDQLALTRESLKSIIQTIKFQQFFPCIGIQQGERIEILDGSRRRASAIYIRTGLDVMVTNELLSADEARHLAKDIQTAKEHNLREIGLRLMALKESGFNQKEIAELEGLSQAKVTRALQAAAVPQELISLFPVQSELSFSDYKILLEVNEKLSEKGLTSEGLIQSVSDQHDAILSDYERPDDEQKSSILKLISQASQALIAPPPKEKSVISALWTFEEKDKFARKRVKGRTLTYEFSRMSKVVQDELDKAINEVLERNLSQ
complement(30659..31864)           PHAGE_Escher_RCS47_NC_042128: terminase large subunit; CEP99_25320; phage(gi100070)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMENIEQLRKVATRAGKLLTSLSESIRQQKEELKLTEFYQEYSKAALYKLPKLSKGSVEYAVAEMEASGYIFKKKPSGNTMKYAMTIQNVIDLYFHRKVPKYRDRFDKAFTIFVCNLKGGGSKTVSTASLSHAFRAHPQLLFEDLRILAIDFDPQASLTMFLSHENSVGLVENTAAQAMLQNVSREELLSDFIVSSIIPGVDVIPASIDDAFLAEGWKGLCEEHLPGQNIHAVLKENIIDKLRYDYDFIFLDSGPHLDAFLKNCIGAADLMLTPLPPATVDFHSSLKFVASLPALIDSIEQDGHTCNLIGNVGFMSKILNKSDHKICHSQAKEVFGADMLDMVLPRLDGFERCGETFDTVISANPATYDGSTEALKSAKSAAEDFAKAVFDRIEFIRTNGGM
32279..33220                       PROPHAGE_Escher_MG1655: predicted transposase; CEP99_25325; phage(gi16131287)        2.06e-110           SalmonellaentericasubspentericaserovarTyphimuriumMKKKNTTPTPHDATFRQFLTQPDIARDFMELHLPAELRAICDLSTLKLESGSFVEDDLRQYFSDVLYSLKTTAGDGYIHVLVEHQSTPDKHMAFRLIRYAVAAMQRHLEAGHKKLPLVIPVLFYTGKRSPYPYSTRWLDEFDDTALADKLYSSAFPLVDVTVIPDDEIAGHRSMAALTLLQKHIHQRDLAELVDRLAPILLAGYLSSSQVISLVHYIVQAGETSDAEAFVRELAQRVPQHGDALMTIAQQLEQKGIEKGIQLGEQRGIEKGRSEGEREATLKIARTMLQNCIDRNTVMKMTGLTEDDLAQIRH
complement(33252..33818)           DUF2913 domain-containing protein; CEP99_25330                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMTLTEKSGHLAWCALVALALARQDGGVLSPAQENLFLTRWLATALKQRRFSRDVTPDIEWLLKQGRQMGVSAKLASKLNYLWRSCTGELSEQNDLFRLTYALETAKDMHWNYRLLSDREWSGRNAVALSAGVNGIYLSRAKLDVGFNDSGRQINSLTARLTGNVAGVMKLFDRCGWQSLMPPCPTSIR
complement(33875..34210)           hypothetical protein; CEP99_25335                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMENMLKTMREHFPVRTVVIEQSLDMFGVKRNEDGTLLFPRHSDKRFPVARIRKRLAAYGWRGERLNKEVARIVAGPDILPERRDYSIIFPYGWEKKQLTREMRRMFLRKTG
complement(34394..34810)           PHAGE_Vibrio_VP882_NC_009016: putative exonuclease; CEP99_25340; phage(gi126010887)     6.79e-08            SalmonellaentericasubspentericaserovarTyphimuriumMKPAPGAEPVRMYKSPYGGKYGVWRLADCVPMRAKRPQTEKQRLASTRLGLQARMKSERGRFAMLAHTWLALGPVFLDTETTGLDAGAQALEIGLVNARGERIFETRLKPTVGIDPAAAAVQIVTEPYRFPVLSVRLA
complement(34896..36011)           PHAGE_Strept_7201_NC_002185: ORF33; CEP99_25345; phage(gi9634660)                    9.65e-08            SalmonellaentericasubspentericaserovarTyphimuriumMRPATYEPEQIIEAGLALQAEGRNITGFALRNQVGGGNPTRLRQIWDEYQASQSTVVTEPVAELPVEVAEEVKAVSAALSERITQLATELNDKAVRAAERRVAEVTRAAGEQTAQAERELADAAQTVDDLEEKLDELQDRYDSLTLALESERSLRQQHDVEMAQLKERLAAAEENTRQREERYQEQKTVLQDALNAEQAQHKNTREDLQKRLEQISAEANARTEELKSERDKVNTLLTRLESQENALASERQQHLATRETLQQRLEQAIADTQARAGEIALERDRVSSLTARLESQEKASSEQLVRMGSEIASLTERCTQLENQRDDARLETMGEKETVAALRGEAEALKRQNQSLMAALSGNKQTGGQNA
