gi|00000000|ref|CP000648.1|  Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN3, 175879, gc%: 51.69%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
24190..24201                       attL                                                                                 N/A                 TTTTCTGGAGGT
24305..24316                       attL                                                                                 N/A                 GGGAGTGACCAT
24362..25024                       PROPHAGE_Brucel_1330: transposase, putative; KPN_pKPN3p05875; phage(gi23502708)      1.22e-47            KlebsiellapneumoniaesubsppneumoniaeMGH78578MWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
25030..25584                       PROPHAGE_Shewan_MR-1: IS110 family transposase; KPN_pKPN3p05876; phage(gi24375433)     2.54e-26            KlebsiellapneumoniaesubsppneumoniaeMGH78578MNKTKGCLIANFATVPIYSTKPLEDAENGLSSRMRRTIAELYDLFNDLERRIHFFDKEIETVFRQSEACQRIAKVKGIGPKTATAVVAAIGKGTEFKNGRHFAAWLGLVPRQHSSGDKHLRTLFIHGARAVVRVATNNNDGHMNQWVNQLKERRGFNKTTVAVANKNARIIWSMLRNETEYQVV
26193..27146                       Predicted Co/Zn/Cd cation transporter; KPN_pKPN3p05877                               N/A                 KlebsiellapneumoniaesubsppneumoniaeMGH78578MQVNKFTDDIDISSHERFIAARKSTWVSVLVNCFLTSGQVITGIFSGSQGLIADGIHSLSDLVSDFVVLIANHKSKKNPDDDHHYGHHRYENGASLILGTILFIVGIGMLWSAVNKMKQPDDIPQVHIVALWVALAALVIKELLFRYMLAVATRVKSTMLVANAWHARSDAASSLVVAIGIIGNLSGFKLLDPVAAMVVGLIVTRMGYSFMSDSLHDLMDRSVDIETENKIKTTLLSTPGVEGIHDLKTRKMGDLVVVDVHLEINGNLSVKVGHDIAVLARKSVLDNHHVLNVMTHVDPFFKEVSGLDYGSVNNHKQ
27258..27632                       Hypothetical protein; KPN_pKPN3p05878                                                N/A                 KlebsiellapneumoniaesubsppneumoniaeMGH78578MRKIMHSVIIGTALVLSTSVIAGSDGVEHAMKMMNKSYRAALKEEDVTSFRKDMQDLKSTAESILNGPVEGYDRETYVAGMSLLIDEVTAVESTAEKEGLDAGKIAAQKLGSMMRKYHNKLGVD
28070..28651                       Hypothetical protein; KPN_pKPN3p05879                                                N/A                 KlebsiellapneumoniaesubsppneumoniaeMGH78578MNENLRNALPHKDTPFLRVLHIILAVLILLQIVSSNLTESDALSDYTLTGFVTWFHVITGLSLIVLGLIMLAWMLTQRGFHYYFAWLTLDFRGVVEDIKMLMSFRLPEAHAGGIAALVQGLGVLALLGVASCGGFWFALNTIPGMSPVLTESVLNLHKFLTVFIETYFWAHGSMGLLHIFLTIRSQMKNSVTE
28769..29476                       nodulin 21-like protein; KPN_pKPN3p05880                                             N/A                 KlebsiellapneumoniaesubsppneumoniaeMGH78578MKGSKDMHLERHSIEKVGWLRAAVLGANDGIVSTASLVLGVASANTSSSGVLLAGVAGLVSGAMSMATGEYVSVSSQADTENAALAQEKRELETDYEGEMQELTSLYIQRGLDPVLAYRVAEQLMARNALDAHAREELGLTDTNSAQPLQAAVFSALSFSAGAVLPLIVAWLSPPKQVFLFIILSTLFSLVVLGYISSVAGKAPPVRAIIRIMFWSTLAMFLSMGIGHFAGQVLL
complement(29619..29930)           Hypothetical protein; KPN_pKPN3p05881                                                N/A                 KlebsiellapneumoniaesubsppneumoniaeMGH78578MVTGKIKKIGTVTFSKNPLVTLYISGSNEGLKFIFENTDYNNDKVAKLNVGDTVIIAGWNARPGTFEGIFLDDSQIMTGMISKKKRQMLAVNGGVYDREICLK
30076..30471                       PHAGE_Pseudo_MD8_NC_031091: hypothetical protein; KPN_pKPN3p05882; phage(gi100010)     1.64e-53            KlebsiellapneumoniaesubsppneumoniaeMGH78578MSNTNANFEMTGILLGQEARKRKTPQEKIAIIQQTMEPGMNVSHVARLHGIQPSLLFKWKKQYQEGSLTAVAAGEEVVPASELTAALKQVRELQRLLGKKTMEVEILKEAVEYGQSRKWIAHAPLLPKDGE
30429..30650                       PROPHAGE_Escher_CFT073: insertion element IS2 transposase InsD; KPN_pKPN3p05883; phage(gi26249446)     3.76e-11            KlebsiellapneumoniaesubsppneumoniaeMGH78578MDSARALVAKGRGIALVSRTMGVSRAQLSLRINRSADWQDKRCNRRNDEADEEILSAILDIMGSVWETANIVR
complement(31079..32083)           PROPHAGE_Shewan_MR-1: IS110 family transposase; KPN_pKPN3p05884; phage(gi24375433)     1.05e-58            KlebsiellapneumoniaesubsppneumoniaeMGH78578MENIALIGIDLGKNSFHIHCQDHRGKAVYRKKFTRPKLIEFLATCPATTIAMEACGGSHFMARKLEELGHFPKLISPQFVRPFVKSNKNDFVDAEAICEAASRPSMRFVQPRTESQQAMRALHRVRESLVQDKVKTTNQMHAFLLEFGISVPRGAAVISRLSTLLEDSSLPLYLSQLLLKLQQHYHYLVEQIKDLESQLKRKLDEDEVGQRLLSIPCVGTLTASTISTEIGDGKQYASSRDFAAATGLVPRQYSTGGRTTLLGISKRGNKKIRTLLVQCARVFIQKLEHQSGKLADWVRELLCRKSNFVVTCALANKLARIAWALTARQQTYEA
32132..32143                       attR                                                                                 N/A                 GGGAGTGACCAT
complement(32162..33427)           PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; KPN_pKPN3p05885; phage(gi100060)     3.88e-175           KlebsiellapneumoniaesubsppneumoniaeMGH78578MGSCAAPSAKGDDKFITTDYLQQCQNNHVRPKDRKLLLTTILADGINLGLTKMAESCPGTTKSSLEGIQAWYIRDETYSAALAELVNAQKKSPLAAFWGDGTTSSSDGQNFRVGSHGRYAGQVNLKYGQDPSVQIYTHISDQYSPFYTKVISRVRDSTHVLDGLLYHETDLEITEHYTDTAGFTEHVFALMHLLGFAFAPRIRDLHDKRLFIHGKAELYQGLQSIISTTSLNLKEIETHWHEVLRLASSIKQGTVTASLMMKKLASYPKQNGLAKALREIGRIERSLFMLDWFRDPLLRRRVQAGLNKGEARNALARAVFMHRLGEIRDRGLENQSYRASGLTLLTAAISLWNTVYIERAIDSLRRKGIPINEQLITHLSPLGWEHINLSGDYVWRTNLKLGQGKYRALRSVNSNMYKKQA
complement(33313..33945)           transposase; KPN_pKPN3p05887                                                         N/A                 KlebsiellapneumoniaesubsppneumoniaeMGH78578MIAFNHVVPVLNLSVFNVRRAPAFAFEQSKRATIGGRFIRVDESRDLPLLHVVEDFTQKPVCSFAVTTGGEIKIDSAAPAVDGPVQIRPAAIDLHVGFIHVPRAKIGRVTPVPAQPFFHFRRITLNPAVNRGVIDIHSAFSQHLLQLTVTDAVFAVPAYGPPNDVTLKMPAFEWVHVQLHQQKGMISLSPPTICNSAKTITSDLKTESCY
33406..34122                       PROPHAGE_Brucel_1330: transposase, putative; KPN_pKPN3p05886; phage(gi23502708)      2.38e-52            KlebsiellapneumoniaesubsppneumoniaeMGH78578MELHMNPFKGRHFQRDIIRWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
complement(34316..34636)           PROPHAGE_Xantho_33913: IS1479 transposase; KPN_pKPN3p05888; phage(gi21229605)        2.16e-36            KlebsiellapneumoniaesubsppneumoniaeMGH78578MKQMTFADAEYAGKRKQTRKELFLIEMDRVVPWKGLIALIEPHYPKGEGGRPAYPLMAMLRVHLLQNWFGYSDPAMEEALYETTILRQFAGLNLERIPDETTICWR
34978..35805                       PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; KPN_pKPN3p05889; phage(gi371496158)     1.94e-26            KlebsiellapneumoniaesubsppneumoniaeMGH78578MMPHPIQDAVLRVDRLSVVYPGGVTALRDTSIAFRRGEFTVLLGLSGAGKSTLLRSLNRLVTPTGGSVTSELGELGSGSALRQHRRRTAMIFQHHQLIERQSALANVLTGRLAFHNTLRSLFPLPRADQEIALSCLARVGLADKALSRVDKLSGGQQQRVGIARALAQQPAIILADEPVASLDPATSVRVLGLLRDICKEDGITAIVSLHQLEYARRFADRVVGLADSQIVFDAAPSELTDAQLERIYAGRSTTQPANTPAEPPVMLEPSLEMSR
43858..43869                       attR                                                                                 N/A                 TTTTCTGGAGGT

#### region 2 ####
39491..40126                       PROPHAGE_Xantho_33913: IS1479 transposase; KPN_pKPN3p05894; phage(gi21229605)        6.68e-45            KlebsiellapneumoniaesubsppneumoniaeMGH78578MKQMTFADAEYAGKRKQTRKELFLIEMDRVVPWKGLIALIEPHYPKGEGGRPAYPLMAMLRVHLLQNWFGYSDPAMEEALYETTILRQFAGLNLERIPDETTILNFRRLLEKHELAAGILAVINGSGRPRPVAAPGHHRRCNADQCAQFDQEQGRQARPGNAPDQEGKPVLFRQCDLKVAWVSVPQVNARRNRLFHHSFPTQTGVAGNSRV
complement(40592..41572)           PHAGE_Bacill_BMBtpLA_NC_028748: IS5 transposase and trans-activator; KPN_pKPN3p05895; phage(gi971482498)     0.0                 KlebsiellapneumoniaesubsppneumoniaeMGH78578MSHQLTFADSEFSTKRRQTRKEIFLSRMEQILPWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVKTLKQHPRKNKTAINIEYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRVDQMIRQWERSQ
complement(41831..42334)           PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; KPN_pKPN3p05896; phage(gi557307573)     1.61e-114           KlebsiellapneumoniaesubsppneumoniaeMGH78578MPGNRPHYGRWPQHDFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLSTLERLLGLLSAFEVVVWMTDGWPLYESRLKGELHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ
complement(42774..43037)           PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; KPN_pKPN3p05897; phage(gi157166064)     5.39e-06            KlebsiellapneumoniaesubsppneumoniaeMGH78578MRPQRRTYSKSFKAQVIQECSEPGASIANIALGYSLNANLDHKWIRLPTQKTTAIQPAFIPLPSQMLGVGSHTQARCCDHEFDPVGP
43875..44444                       PHAGE_Cyanop_P_RSM1_NC_021071: heat shock protein; KPN_pKPN3p05898; phage(gi481019345)     7.81e-08            KlebsiellapneumoniaesubsppneumoniaeMGH78578MDIDFKKLAPWNWFKNEQQEQQTVSSLPVQRNDLPAASGPVSPILQLHREIDRLFDDAFRGFGFPALNMPQWPSDWSGMLKPALDIQETDKQYKIALEVPGVEEKDIQITLDNDVLMVRGEKRQEQEKKEGGFHRVERSYGSFQRALNLPDDANQDSIKASFKNGVLTVTIDKREVSAPKQGRSIPING
44559..47354                       PROPHAGE_Escher_EDL933: ATP-dependent Clp protease ATP-binding subunit; KPN_pKPN3p05899; phage(gi15800640)     1.10e-161           KlebsiellapneumoniaesubsppneumoniaeMGH78578MARKQCQVCGQPATVRVEANLNGRHSTMLLCDDHYRQLVRQQKRTVSPLEALFGSRSGLFEDFLGSDFFRIGDDATPVAADTDDVVDASFGEPAAAGSGAPRRRGSGLASRISEQSEALLQEAAKHAAEFGRSEVDTEHLLLALADSDVVKTILGQFKIKVDDLKRQIESEAKRGDKPFEGEIGVSPRVKDALSRAFVASNELGHSYVGPEHFLIGLAEEGEGLAANLLRRYGLTPQALRQQVSKVVGKGAEDGRAETPTNTPELDKYSRDLTKMARDGKLDPVIGRAQEIETTIEVLARRKKNNPVLIGEPGVGKTAIVEGLAQRMVAGEVPETLRDKRLVELNINAMVAGAKYRGEFEERVQKVLKEVTEHQGELILFIDEVHTIVGAGQGGGEGGLDVANVFKPMMARGELNLIGATTLNEYQKYIEKDAALERRFQPVTVPEPTVAQAIMILRGLRDTFEAHHKVSISEDAIIAAAELSDRYITARFLPDKAIDLLDQAAARVKLSATARPVAVQELESELHQLRREQDYVAARKQYDQAAELGKRIEAKEAELKKLVEDWERERASGSAEVKAEHVAQIVSRLTGIPVNELTVEEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGSKPVATFLFLGPTGVGKTELAKALAESIYGDEHALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSDIIQRRLKARGAAGEEYEKTKAGVMDVLRGHFRPEFLNRIDEIIVFHALGKEEIRHIVGLQLDRVARSAASQGVTLTFDQTLIDHFAEEGYKPEFGARELKRLIRSELETALAREMLGGGIGKGDHASARWDDKAERVVFERKEPPQTPAEPEQPDAAKASDAS
47354..47551                       Hypothetical protein; KPN_pKPN3p05900                                                N/A                 KlebsiellapneumoniaesubsppneumoniaeMGH78578MAGEAAVSDPIGLALAWAASLASIAVAVVAAGHAGVYKRDEQSATPWGLLISGGTALPLAGHPFA
47789..48538                       Hypothetical protein; KPN_pKPN3p05901                                                N/A                 KlebsiellapneumoniaesubsppneumoniaeMGH78578MLLEAASIEGAQVWAERFRQDTAATAVVCGEVSISYSASMGGALLDPRLHSVEQVMLQADSALYQAKKTRVQPSCGRTSISELRGVAMKEKQADPIKTFRAQWAVMTFYERFEQVIALALSAIIAVIIVVSLLQLISIVFSLLIIDAFNPLDHKVFQTVFGMIMTLLIAMEFKHSIVRVALRRDSIIQVKTVILIGLIALARKFVILDPETGPAKVAALAGATLALGATYWLLRERDDRTAGESSDDQS
48525..48731                       Zn-dependent protease with chaperone function; KPN_pKPN3p05902                       N/A                 KlebsiellapneumoniaesubsppneumoniaeMGH78578MISRDLRHAQNVGARHRWHNRLQTVLLVLTLLGIAAVAGSLLLGDGGLWLALAAAGFTLLLEPAAAPG
48734..49486                       Zn-dependent protease with chaperone function; KPN_pKPN3p05903                       N/A                 KlebsiellapneumoniaesubsppneumoniaeMGH78578MRLYGARPLHPDEAPDLWAVLRELAARAGLPTVPVPHYVPSGVVNAFATGSKHHAAIALTDGLLRSLTPRELTGVLGHEIAHIANEDLRVMGLADSISRLTHLLALLGQLAIVLSLPTLLLGVTEVNWPALLLLAVAPQLALLAQLGLSRVREFDADRLAAELTGDPHGLASALAKIERVSRSWRAWLLPGWGNPEPSWLRTHPATAERIERLLELAPPPAMPPFPSARFDPEVTVSPRPPRWRTGGLWR
49801..50106                       Hypothetical protein; KPN_pKPN3p05904                                                N/A                 KlebsiellapneumoniaesubsppneumoniaeMGH78578MRKRKSAPQDKNQDALLGEIQRLRKQVHQLQLERDILTKANELIKKDLGVSFLKLKNREKTLIVDALKKKYPVAELLSVLQLARSCYFYQNVCTISMRKYA
50055..50828                       PROPHAGE_Escher_MG1655: IS150 transposase B; KPN_pKPN3p05905; phage(gi16131429)      7.47e-62            KlebsiellapneumoniaesubsppneumoniaeMGH78578MLFLPKRLYDKYAEIRVIMADIFEENYRCYDYRRLHAMLRGNNRVISEKVVRRLMAEEQLVVKRTRRRRYNSYCGEIGPAPENLLARDFSSCRPNEKWLTDITEFQLPAGKVYLSPVIDCFDGLVVSWSIGTRPDATLVNTMLDDALDTLNEHDKPVIHSDRGGHYRWPGWLERINTSGLIRSMSRKGCSSDNAACEGFFGRIKNEMFYGRDWAGITLEKFICFLDRYIRWYNEKRIKLSLGAMSPVKYRQHLGITT
