gi|00000000|ref|AAMMYA010000001.1|  Salmonella enterica strain PNUSAS110827 744214, gc%: 51.13%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
236513..236524                     attL                                                                                 N/A                 TGTTTTGTGTGA
complement(249780..250478)         PHAGE_Yersin_fHe_Yen9_04_NC_042116: L shaped tail fiber protein; GEW07_01310; phage(gi100273)     5.89e-18            SalmonellaentericaMLRIIDTETCGLQGGIVEIASVDVIDGNIVNPMSHLIRPDRPITPQAMAIHRITEAMVADKPWIEDVIPLYYGSEWYVAHNASFDRRVLPELPGEWICTMKLSRRLWPGIKYSNMALYKSRKLSVQTPPGLHHHRALYDCYITAALLIDIMRTTGWTAEEMVNITGRPALLTTFPFGKYRGKAVSEVAKRDPGYLRWLFNNLDNMSPELRLTLKHYLEDVQADEQRSNGTPQ
complement(250502..251158)         carbon-nitrogen hydrolase family protein; GEW07_01315                                N/A                 SalmonellaentericaMSSWKIAAAQYAPLNASPAEHVAHHLEYIELAARQQCELLVFPSLSLLGCDERNKSLPAPPDEALLQPLTHAADTHHMTIIVGMPVEHNCRFVKGIAIFAPWLTSPLMFHKSHGACIARQRSAINVVDEQPEGGDIDPSFTLFTTSQCLNEPELHASTSRLQRFSHKYALAVLMANACGSSALWDESGQLIVRADCGSLLLTGLRTTEGWQGDIIPLR
complement(251265..251495)         PHAGE_Pectob_ZF40_NC_019522: putative DNA polymerase; GEW07_01320; phage(gi422936677)     1.97e-22            SalmonellaentericaMKTNLAQLEQAEMDKVNVDLAAAGVAFKERYNMPVVAEVVEREQPEHLRAWFRERLIAHRLASVSLSRLPYEPKVK
251633..252007                     hypothetical protein; GEW07_01325                                                    N/A                 SalmonellaentericaMASSAPSRRLALLLLASTFATPAAWAHAHLTHQYPAANAAVTASPQALTLNFSEGIEPGFSGATITGPQQELIKTRPAKRNEQDKTQLIIPLEQPLKSGAYTVDWHVVSVDGHKTKGKYTFSVK
252008..252883                     hypothetical protein; GEW07_01330                                                    N/A                 SalmonellaentericaMMLTFVWITLRFIHFASLMLVYGCALYGAWLAPASIRRLMTRRFLHLQRHAAAWSVISAAFMLAIQGGLMGGGWPDVFSVSVWGAVLQTRFGAVWIWQIILALVTLVVVVIAPVKMQRRLLILTVAQFILLAGVGHATMRDGVAGTLQQINHALHLLCAAAWFGGLLPVVYCMRMAQGRWRQHAISAMMRFSRYGHFFVAGVLLTGISNTLLITGFTAIWQTTYGQLLLLKCALVVLMVAIALTNRYVLVPRMRQENPRTDLWFVRMTQIEWGVGGIVLAIVSLFATLEPF
252900..253253                     PHAGE_Salmon_SEN1_NC_029003: hypothetical protein; GEW07_01335; phage(gi971764937)     1.33e-11            SalmonellaentericaMKKILLPALLLATSGVALAAPQVITVSRFEVGKDKWAFNREEVMLTCRPGQALYVINPSTLVQYPLNAIAEQQVAEGKTRAQPIAVIQIDNPAKPGEKMSLAPFIERAQKLCDPSNS
complement(253627..254706)         PHAGE_Entero_HK022_NC_002166: integrase; GEW07_01340; phage(gi9634144)               5.03e-91            SalmonellaentericaMSRKKYDANLPRYLTYRKASKSFFWRNPVTDKEFPLGQIARRDAITQAIEANNFIAQNHTPVALIEKLKGTDSFTVSAWIDRYEVLLQRRSLSVNTYKIRSNQLATVREKMGEIILAEVTTRHIAKFLESWITEGKNTMAGAMRSVLSDMFREAIVEGHIVKNPVETTRIPEIKVARERLQLETYNATRTAAEHLPVWFSLAMDLALVTGQRREDIVNMKFSDIVDGRLHVTQIKTGMKIAFPLSLTLEAPGLRLGTVIDRCRLVSRTDFMISAGIRKNSPTGNIHPDGLTKKFVKARKISGAKFSDNPPTFHEIRSLAGRLYKDERGEEFAQKLLGHTSENTTKLYLDERDNKAYVML
complement(254703..255650)         PHAGE_Erwini_phiEt88_NC_015295: exodeoxyribonuclease; GEW07_01345; phage(gi327198600)     2.87e-51            SalmonellaentericaMEQDTTEHHPDPQPLENEPPVSQTEAGYQKIRAELHEARKNIPPKNPVDVGKQLAAVRGEYAEDISDPNDPKWVPNNYSASNQGEKEEVVPEEKQLAAEPEAVTRNADGTFDVSALFPPPSNQTEKTEARTERDGETPKESNQQETAGDTGQEITTDGGSGTGGDEAGEAADPVENGNFTVPDDIQPGIYYDIPNEAYHAGPGVSKSQLDDIVDTPAIYLWRKNAPVDTEKTKSLDTGTAFHCRVLEPEEFSKRFIIAPEFNRRTSAGKEEEKTFLEECARTGRTVLTAEEGRKIELMYQSVMALTECIAGEVDQ
255840..256127                     PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage endolysin; GEW07_01350; phage(gi169257182)     2.78e-51            SalmonellaentericaMDGNKAFAPRPAKIRITGLENYTRCGVALKLDLVANPGQLELERHAARSAAWFFVTKGCLKYSGDLVRVTQIINGGQNGIGDQRERFEKAKSVLV
256124..256657                     PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; GEW07_01355; phage(gi16765210)     4.67e-122           SalmonellaentericaMNLLSALLKRYWLQLVFILLMAGAFIVGNVWSDRGWQKKWADRDSAESSQEVNAQTAARIIEQGRVIARDEAVKDAQAQAAKSAATAAGLSATVSQLRTEAKKLATRLDAAKHTANLAAAVRSKTTNADARMLANMLGDIAEEAKHYAGIADERYRAGMTCERVYDSVRESNNYRRY
complement(256914..257081)         lytic enzyme; GEW07_01360                                                            N/A                 SalmonellaentericaMKNIITIIVAIIIVFYAGMWSQKFLMEDECLDSGGSYNENGICNIAGSHQDVPPK
complement(257146..257329)         hypothetical protein; GEW07_01365                                                    N/A                 SalmonellaentericaMNKKHTNHHLLKKHNRELQHDDAKIKNAPNPAPLPPRGRPPRREYLFKMRTIINNYHLA
257384..257875                     PHAGE_Salmon_Fels_1_NC_010391: bacteriophage terminase, small subunit; GEW07_01370; phage(gi169257184)     1.32e-110           SalmonellaentericaMDGELKNLKCNISQLAAITGLHRQTVVSRLSGVPLAPGSNEKNKLYLLTDVIRVLMETPVSQPAEHQDPNKMTAKERKGWFDSEKGRLWLEKEMKQVVPLPEVRQQMAAIVKAITQVLEVWPDKLEKDKGWSADQLNEAQDVMDEVRILLVKAIQETADDDGE
257862..258429                     PHAGE_Salmon_Fels_1_NC_010391: bacteriophage terminase, large subunit; GEW07_01375; phage(gi169257185)     2.02e-26            SalmonellaentericaMTGNKYGSAAAVRREVAEYLRPPRRMPVAEGIKQFMFVPRGANTAVPWDDTLASQSFPKQQRPRNVSWFIPENWLAVHNRFFFVGLQAGGADRLPFPRYRWRGRWFFPGIQTYHHLYVCGDDTGREFAWSGNHRCEMAAFFAARSPAHDRHSFSLPGRSPSVVLALSTLRRLVPARDGKHGGVT
258428..259765                     PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage tail fiber protein; Lambda gpN homolog; GEW07_01380; phage(gi169257204)     0.0                 SalmonellaentericaMGEVQTKASLDSPALTGTPTAPTPETTAAGIEIATAAFVAAKVAQLVGSAPEALDTLQELADALGNDPNFATTVLNKLAGKQPLDETLTALSGKSADGLIEYVGLRETINHAADALQKSQNGGDIPEKPLFVQNIGALPASGTAVAANRLASRGALPALTGTTRGSDSGLIMGEVYNNGYPTQYGNILCLTGIGDGEILIGWRGVNGAPASAYIRSHRDTADAEWSEWAMFYTSLNPPPDSYPVGVAIAWTSDATPAGYALMQGQLFDKSAYPLLAIAYPSGIIPDMRGWTIKGKPTSGRAVLSQEMDGNKSHSHTARAQDTDLGTKTTSSFDCGTKLTNTMGNHTHQFGGYINSYRGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYNGGRMWSGPPGQRRPANEAGVGKFQ
259737..260057                     PHAGE_Salmon_SEN5_NC_028701: tail fiber protein; GEW07_01385; phage(gi966201575)     1.04e-54            SalmonellaentericaMKLAWESFSNPPKVINWQYASARQNAVFSTTAYCPSKTLCPNARTEYIGFGDYRTYCKKSGNTCISPRHQVDDIYIGSHNHAVSLSPNFHGKHLKPEYLSGVKNDV
260047..260631                     PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage tail assembly protein; GEW07_01390; phage(gi169257205)     5.88e-111           SalmonellaentericaMTFKMSDTPQTIKIFNLRSDTNEFIGAGDAYIPPHTGLSANCTDIAPPDIPSSYIEVFDSEIQTWSLHEDHRGETVYDTTTGNQVYISDLGPLPENVTSVSPGGGYKKWDSKAQVWVNDEAAEAAARLREAEGTKNRRLQIASEKIAPLQDAVDLDGATDKEKASLLAWRKYRVQVNRVDTLKPVWPEKPASSL
complement(260728..260928)         PHAGE_Phage_Gifsy_1_NC_010392: PagK-like protein; GEW07_01395; phage(gi169257211)     5.45e-42            SalmonellaentericaMKHVKSVFLAMVLILPSSLYPALTIAADSQDHKKEETIKPMPQKWCNLWPAGIPFPEDWFKMCRGY
complement(261119..261235)         PHAGE_Salmon_SEN34_NC_028699: putative tail assembly chaperone; GEW07_01400; phage(gi966201445)     4.14e-06            SalmonellaentericaMWLAYKNEVKLIDITNTPDNVNWPVPPGERASHDLKST
261498..261623                     arsenic transporter; GEW07_01405                                                     N/A                 SalmonellaentericaMFANADSELILTPIIIAVLLAPGFSKSTTLAILHFFFRREK
261752..262018                     hypothetical protein; GEW07_01410                                                    N/A                 SalmonellaentericaMVLTLYEGLIEHQIYPGLFNTAYYEGNNMFSLIKSRKVLFITTLLLLSSAAQPAFALGCIGDGGSTADCAKVCSLAAGLGPLGFLICF
262298..262444                     PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; GEW07_01415; phage(gi100036)      8.19e-17            SalmonellaentericaIGGRRPKLTPEQWAQAGCLIRAGVPRQQVAIIYDAGLSTLYRKFPVLG
270167..270178                     attR                                                                                 N/A                 TGTTTTGTGTGA

#### region 2 ####
417787..417800                     attL                                                                                 N/A                 GCCGCTTATGCCGC
complement(432029..432835)         PHAGE_Bacill_G_NC_023719: gp245; GEW07_02290; phage(gi593777701)                     1.09e-19            SalmonellaentericaMVETLLEVRNLSKTFRYRTGWFRRQTVDAVKPLSFTLRERQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHYGDYSFRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQRRKQIVETMRMVGLLPDHVSYYPHMLAPGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHIGMMKHISDQVLVMHQGEVVERGSTADVLASPLHELTRRLIAGHFGEALTADAWRKDR
complement(432837..433829)         PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; GEW07_02295; phage(gi371496158)      4.19e-09            SalmonellaentericaMPLLDIRNLTIEFKTSEGWVKAVDRVSMTLSEGEIRGLVGESGSGKSLIAKAICGVAKDNWRVTADRMRFDDIDLLRLSSRERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPAWTYKGRWWQRLGWRKRRAIELLHRVGIKDHKDAMRSFPYELTDGECQKVMIAIALANQPRLLIADEPTNSMEPTTQAQIFRLLTRLNQNSNTTILLISHDLQMLSQWADKINVLYCGQTVETAPSKDLVTTPHHPYTQALIRAIPDFGSAMPHKSRLNTLPGAIPLLEQLPIGCRLGPRCPYAQRECIITPRLTGAKNHLYACHFPLNMERE
complement(433829..434719)         peptide ABC transporter permease SapC; GEW07_02300                                   N/A                 SalmonellaentericaMPYDSVYSEKRPPGTLRTAWRKFYSDAPAMVGLYGCAGLALLCIFGGWIAPYGIDQQFLGYQLLPPSWSRYGEVSFFLGTDDLGRDVLSRLLSGAAPTVGGAFIVTLAATLCGLVLGVVAGATHGLRSAVLNHILDTLLSIPSLLLAIIVVAFAGPHLSHAMFAVWLALLPRMVRSVYSMVHDELEKEYVIAARLDGATTLNILWFAILPNITAGLVTEITRALSMAILDIAALGFLDLGAQLPSPEWGAMLGDALELIYVAPWTVMLPGAAITLSVLLVNLLGDGIRRAIIAGVE
434843..435244                     PHAGE_Entero_phi80_NC_021190: integrase; GEW07_02305; phage(gi824479609)             4.88e-42            SalmonellaentericaMCTLMCISSHEVYTLLADTKLRKAPGKKRDQIKVISDAHGLNVRLSTSGSITFFYRYRWNGNAAQLTIGDYPTISLSHARERRQYFRSWLTEGLDPRHQMVLEKKKKTEALTVKEHTTTGRSFSTVRNLGQGH
435189..435447                     PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; GEW07_02310; phage(gi423262434)     2.70e-11            SalmonellaentericaIRLLGEVLALYGIWARVIKTDNGGWRQFGVWRDQDVAALVEAARGGIRGIVRLKVSGGVCVQLRYSLGGSQDRSEYSGMGCCVLA
complement(435624..436346)         PHAGE_Stx2_c_1717_NC_011357: hypothetical protein; GEW07_02315; phage(gi209447200)     3.20e-35            SalmonellaentericaMGEKGFNKSACLHMLGQQISRVFSGKHLYPGVFISKDAASEFEKTISTHYKTLSSHIDLQQYTNDVNCGAAVGIVARQQENLILDEITLSAFKKVYITGHGAAGTNVLASGDSVFSAKQLVDILVANKVLEVIKDIRISSCYSADKREPNSFKKEDIDKANRNAGFFERMVFGERDTFIERVANEIWSRGYIDVKVSGYHGAGVFYAGEIPFTHLRSTTIPPTITVKRKSVRVTLESPID
436817..436999                     PHAGE_Salmon_SPN3UB_NC_019545: NinG; GEW07_02320; phage(gi423262439)                 1.48e-27            SalmonellaentericaMAKLPRRKCKVCREWFSPAYSNVVWCCPEHGAIYALELRARRIRDKYQTDKAERQANAAV
437249..437389                     pertussis toxin subunit; GEW07_02325                                                 N/A                 SalmonellaentericaMIFRDGFASHGNNRNLQQHIRDDSCASGSRDSTILRLSQILMSLII
437428..437727                     pertussis toxin subunit; GEW07_02330                                                 N/A                 SalmonellaentericaMYRYRIRADNSFYSLPPSVAYIELCGIQFGHFERVMMQLQSEYVSVNSIPIENIHEAVELVYERNASMVNIVGVDYEKEIKGSDSCSCVIIQCLLCSYG
437654..438079                     subtilase cytotoxin subunit B-like protein; GEW07_02335                              N/A                 SalmonellaentericaMKKKLKVLTLALASLSSVCYAAMADYDTYVSNVQIKNLSYGVYTSGDKETQFFCIELKRGSEAISVNAMCKVDVYGNHKQGFDNMLNIAKYYYTTGGDVRIYYKENVWRDPDFKSAFSSRELIAITTCSSSSYCMGPMLTN
438138..438233                     PHAGE_Entero_phiP27_NC_003356: putative holin; GEW07_02340; phage(gi18249892)        1.36e-08            SalmonellaentericaMSEPLSGSCMAVAICGATIFRLFTGADFGIVF
438533..438769                     PHAGE_Salmon_SEN8_NC_047753: hypothetical protein; GEW07_02345; phage(gi100026)      2.67e-38            SalmonellaentericaMRHLVVLVEELRERGVNFHSLTDSSIDTSTPMGRFFFHVMGTLDEMERELIVERTRAGLEATRERGCNGGRRPKLTLEQ
450681..450694                     attR                                                                                 N/A                 GCCGCTTATGCCGC
