gi|00000000|ref|NZ_UCYC01000012.1|  Escherichia coli strain VREC0362, whole genome shotgun sequence. 182991, gc%: 50.95%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
81396..81408                       attL                                                                                 N/A                 GGCAGAATCCTAT
91123..92787                       PHAGE_Bacill_0305phi8_36_NC_009760: PcrA helicase; DT437_RS15665; phage(gi156564011)     1.47e-13            EscherichiacoliMITVEEWQPADGLTLEPNAKRAAKASKRCLALTAGPGAGKTEMLAQRADFLLRTGTCRYPKRILAISFKVDASRNLTERVERRCGRYLASRFDSFTFHAFAKRIIDRFRPVLTGEYALDAGYTIVDKKSGASRHEIAFGDLVPYAIKILQTSKIARNAIRQTYSDIFLDEFQDCTNLQYDLVKLAFQGTKIRLTAVGDTKQKIMAWAGALDGIFQSFTKDFNAVPLNMYRNFRSKPTLLRVQNEIIRKLDPDSVMPDAQLEGDDGEVFAWKFEDSQTEAIYLADLIYEWINTEKLPPAEIAVLISKQPDLYADHLFKELEQRGIPYRNEQQMQDITVEPVARLIVDYLSCLYGHREPKAWIRLMNQLVPFADEEIQTSVRKDLDHLIKKHRKGVSEAKKTDAPFSEWWTFSRAFLKHIGLQTLVALSPDYESHDRLKQVMRDAKARIKDLLEIESDLPLALKRFSDDQAVRILTIHKSKGLEFDSVVIMAIENEIFFGDEEENRCAFFVGVSRAKRRLILTHTNKRDEPANARHWKVFRTARVEYFDYVLPFVR
93127..93374                       DUF905 domain-containing protein; DT437_RS15670                                      N/A                 EscherichiacoliINIEDDQGSHVRLIVRDAEGRMVSWHGTLNRMPLKVLTAISAPGICTDVSTHPRILYQQHFTFPNNHYYPIRQPSPLAFFIGA
93388..93846                       PHAGE_Pseudo_YuA_NC_010116: hypothetical protein; DT437_RS15675; phage(gi162135127)     1.17e-19            EscherichiacoliMPIATQNNLASANESEFELTVTQVPDEQRIRFWPQHFGAIPQWITLEPRIFAWMDRFCDEYSGGIWSFYTLSNGGAFMAPDADVDDKWHLFNGMNGNGAQMSAEAAGIAVCLIEYSHHACRTECDAMTEHYYRLRDYALQHPESNAIFRIID
93855..94337                       DNA repair protein RadC; DT437_RS15680                                               N/A                 EscherichiacoliMMEQSLSPLSPILPLTAQRTIKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMVLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVLFAHNHPSGDITPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL
94346..94489                       DUF987 family protein; DT437_RS15685                                                 N/A                 EscherichiacoliMKIISKRRAMTIYRQHPASRIFRYCTGRYQWHGSVCYYSGGEVPDIT
94586..94903                       type IV toxin-antitoxin system YeeU family antitoxin; DT437_RS15695                  N/A                 EscherichiacoliMSNITWGLQRDITPRLGARLVQEGNRLHYLADRASITGKFSDAECLKLDVAFPQFISQMESMLTTGEMNPRHAHCVILYHNGFTCEADTFGSCGYVYIAIYPIQR
94924..95289                       TA system toxin CbtA family protein; DT437_RS15700                                   N/A                 EscherichiacoliMKTLPATISRAAKPCLSPVAVWQMLLTRLLKKHYGLTLNDTPFCDQTVIQEHIDAGITLANAVNFLVEKHELVRIDRTGFTSQEQAPYLTVTDILHARRACGLMNSCSYREVSNIVLSRSR
complement(95503..96666)           PHAGE_Entero_SfV_NC_003444: integrase; DT437_RS15710; phage(gi19549014)              0.0                 EscherichiacoliMSLFRRGEIWYASFTLPNGKRFKQSLGTKDKRQATELHDKLKAEAWRVSKLGEIPDITFEEACVRWLEEKAHKKSLDDDKSRIGFWLQHFAGMQLRDITESKIYSAMQKMTNRRHEENWKLRAEACRKKGKPVPEYTPKPASVATKATHLSFIKALLRAAEREWKMLDKAPIIKVPQPKNKRIRWLEPHEAQRLIDECPEPLKSVVEFALATGLRRSNIINLEWQQIDMQRRVAWINPEESKSNRAIGVALNDTACRVLKKQIGNHHRWVFVYKESCTKPDGTKAPTVRKMRYDANTAWKAALRRAGIDDFRFHDLRHTWASWLVQAGVPLSVLQEMGGWESIEMVRRYAHLAPNHLTEHARQIDSILNPSVPNLSQSKNKEGTNDV
complement(96893..97198)           PHAGE_Entero_SfV_NC_003444: hypothetical protein; DT437_RS15720; phage(gi19549015)     4.48e-68            EscherichiacoliMTTFTDKELIKEIKERISSLDVRDDIERRAYEIALLSLEVEPDEREAYELFMEKRFGDLVDRRRAKNGDNEYMAWDMTLGWIVWQQRAGIHFSAMSQQEVK
complement(97198..97560)           PHAGE_Entero_SfV_NC_003444: hypothetical protein; DT437_RS15725; phage(gi19549016)     4.34e-85            EscherichiacoliMRMNVFEMEGFLRGRCVPRDLKVNETDAEYLVRKFDALEAKCAAQENKVIPVSTELPPANESVLLFDANGEGWLIGWRSLWYTWGQKETGEWQWTFQVGDLENVNITHWAVMPKAPEAGA
complement(97551..98087)           PHAGE_Entero_SfV_NC_003444: hypothetical protein; DT437_RS15730; phage(gi19549017)     2.59e-129           EscherichiacoliMSFIKTFSGKHFYYDRINKDDIDINDIAVSLSNICRFAGHLSHFYSVAQHAVLCSQLVPQKFAFEALMHDATEAYCQDIPAPLKRLLPDYKQMEEKIDAVIREKYGLPPVMSTPVKYADLIMLATERRDLGLDDGSFWPVLEGIPATEMFNVIPLTSGHAYGMFMERFNELSELRKCA
complement(98215..99039)           PHAGE_Entero_SfV_NC_003444: hypothetical protein; DT437_RS15735; phage(gi19549018)     0.0                 EscherichiacoliMSQNLDATAINQIHALISAQGVNEIISKIGADAVALPENFRIHDLEKFNLNRFRFRGALSTASIDDFTRYSKDLADEGTRCFIDADNMRAVSVLNLGTIDEPGHADNTATLKLKKTAPFSALLSVNGERNSQKSLAEWIEDWADYLVGFDANGDAIQATKAAAAVRKITIEANQTADFEDNDFSGKRSLMESVEAKTKDIMPVAFEFKCVPFEGLKERPFKLRLSIITGDRPVLVLRIIQLEAVQEEMANEFRDLLVEKFKDSKVETFIGTFTA
complement(99105..99467)           PHAGE_Entero_SfV_NC_003444: hypothetical protein; DT437_RS15740; phage(gi19549019)     4.70e-82            EscherichiacoliMASERSTDVQAFIGELDGGVFETKIGAVLSEVASGVMNTKTKGKVSLNLEIEPFDENRVKIKHKLSYVRPTNRGKISEEDTTETPMYVNRGGRLTILQEDQGQLLTLAGEPDGKLRAAGR
complement(99482..99792)           hypothetical protein; DT437_RS25520                                                  N/A                 EscherichiacoliVVNAAQRTRVKVEADSRPSVDTHPPGVQPSPGTGRHPAPQLYAVCSPGGTSLYPCFRLVPSFLQNREEHHRTTGSPNPSGRLPLQVFFSVLWRNSALQGRYGA
99936..100370                      PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; DT437_RS15755; phage(gi557307562)     7.21e-104           EscherichiacoliMSGNIYTLYKSHCENVGKYRGIEISGVVSSVEISKVESRATLLTLLDLVLHEHRKKFGTPYNQLNGKKALVHLILMKHHWMPKQINEMKFDELLLSIQDELTLDKISVTAQKFLDYRDWRSQIHHFDDFDENEWDPNLSAQYLK
complement(100342..100548)         hypothetical protein; DT437_RS15760                                                  N/A                 EscherichiacoliMHKTEPKIVAPGYTDEEIYEWMTKKLAAINQLREVLSYRQETIDSLKKLDQEITVLSQDVTLDIVQTN
complement(100796..101422)         PHAGE_Entero_DE3_NC_042057: hypothetical protein; DT437_RS15765; phage(gi100021)     2.78e-60            EscherichiacoliMETVGQRIKALRRVTRTSQKELGKFCGVSDVAVGYWEKDINTPGGEALSKLAKFFNTSIDYILYGAEFEGKLVTNMRRVPVISWVQAGQFTECRAAEVFSEVDKWVDTSLKVGDNSFALEVKGDSMTNPNGLPTIPEGATVIVDPDAEPRHGKIVIARLDGTNEATVKKLVIDGPQKFLVPLNPRYPNIPINGNCLIIGVVKGVQYEL
101520..101678                     PHAGE_Entero_mEp390_NC_019721: prophage anti-repressor; DT437_RS15770; phage(gi428782702)     1.16e-06            EscherichiacoliMTTDDIESYFGSIEKVAAFFGITTEAVYQWRNRPGQLIPKGRAAEAAYRTCGR
101679..101936                     PHAGE_Entero_SfV_NC_003444: hypothetical protein; DT437_RS15775; phage(gi19549029)     1.74e-53            EscherichiacoliFPPTNQEVATMLGYRSVNAAVEHLRALEKKSVITIKRGVARGITLHTAVKDDDSEAVGIIRALLAGEENARLRAAHWLHERGLKV
101933..102139                     PHAGE_Entero_SfV_NC_003444: crossover junction endodeoxyribonuclease; DT437_RS15780; phage(gi19549030)     7.29e-44            EscherichiacoliMKLILPFPPSVNTYWRHPNKGAFAGKSLISAAGRKFQSAACAAIVEQLRRLPKPTSAPASVEIVLFPPD
102137..102229                     PHAGE_Entero_SfV_NC_003444: hypothetical protein; DT437_RS25760; phage(gi19549032)     3.41e-12            EscherichiacoliDTAAFEEKYGSQLELIFRFIDRALATGVLA
102247..102630                     PHAGE_Shigel_Stx_NC_029120: antitermination protein Q; DT437_RS15785; phage(gi985761278)     3.62e-71            EscherichiacoliMRDIQMVLERWGAWAANNREDVTWSSIAAGFKGLLPSKVKSRPQCCDDDAMIVCGCMARLKKNNSDLHDLLVDYYVGGMTFMSLASKHCCSDGYIGKKLQKAEGIIEGMLMALDIRLEMDIVVTKSN
complement(102818..103915)         porin; DT437_RS15790                                                                 N/A                 EscherichiacoliMKKLTVAISAVAASVLLAMSAQAAEIYNKDSNKLDLYGKVNAKHYFSSNEADDGDTTYVRLGFKGETQINDQLTGFGQWEYEFKGNRAESQGSSKDKTRLAFAGLKFGDYGSIDYGRNYGVAYDIGAWTDVLPEFGGDTWTQTDVFMTQRATGVATYRNNDFFGLVDGLNFAAQYQGKNDRNDFENYTEGNGDGFGFSATYEYEGFGIGATYAKSDRTDTQVNAGKVLPEVFASGKNAEVWAAGLKYDANNIYLATTYSETQNMTVFADHFIANKAQNFEAVAQYQFDFGLRPSVAYLHSKGKDLGVWGDQDLVEYVDVGATYYFNKNMSTFVDYKINLLDKNDFTKALGVSTDNIVAVGLVYQF
104490..104684                     PHAGE_Entero_SfV_NC_003444: hypothetical protein; DT437_RS15795; phage(gi19549034)     2.74e-37            EscherichiacoliMLKQLDMTETAKVVFNELNGKPATVGEIAQNTYLSRERCQLILTQLVMAGLADYQFGCYRRLQQ
104834..105886                     PHAGE_Entero_SfV_NC_003444: hypothetical protein; DT437_RS15800; phage(gi19549035)     0.0                 EscherichiacoliMKNTVKINSVDLINADCLHFIQSLPDDSIDLIVTDPPYFKVKPNGWDNQWKGDEDYLKWLDHCLAQFWRVLKPAGSLYLFCGHRLASDTEIMMRERFNVLNHIIWAKPSGRWNGCNKESLRAYFPATERVLFAEHYQGPYRGKSDGYAAKERELKQHIMAPLISYFRDARAELGITAKQIAEATGKKNMVSHWFGASQWQLPNEADYRKLQALFSRIAAEKFQEQQLEQPHHQLVASYDSLNRKYSELLDEFKTLRRYFSVSVSVPYTDVWTHKPVQFYPGKHPCEKPADMLRQIISASSRQGDLVADFFMGSGSTIKAAMALGRRALGVELESERFNQTVKEVSELVGK
105963..106298                     PHAGE_Entero_SfV_NC_003444: holin; DT437_RS15805; phage(gi19549036)                  1.01e-74            EscherichiacoliMPHNPNTWPDWLELFQSWWRGDTPLGAVIMSIVMAGLRIAYFGGGGGWKRKTLEILLCGALTLTFASALEYVGWPKSLSVAIGGGVGLIGVDAIRGAAMRVIGNKFGSSKE
106302..106778                     PHAGE_Escher_ECP1_NC_049926: hypothetical protein; DT437_RS15810; phage(gi100017)     3.33e-110           EscherichiacoliMQVLNSQRKAFLDMVAWSEGTDNGRQPTRNHGYDVIVGGELFTDYSDHPRKLVTLNPKLKSTAAGRYQLLSRWWDAYRKQLGLKDFSPKSQNAVALQQIKERGALPMIDRGDIRQAIDRCSNIWASLPGAGYGQFEHKADSLIAKFKEAGGTVREIEV
106995..107177                     PHAGE_Entero_lambda_NC_001416: Rz1 protein; DT437_RS25530; phage(gi160338810)        2.51e-34            EscherichiacoliMRKLKMMLCVMMLPLVVVGCTSKQSVSQCVKPPPPPAWIMQPPPDWQTPLNGIISPSERG
complement(107268..107561)         PHAGE_Escher_ArgO145_NC_049918: tail length tape-measure protein; DT437_RS15820; phage(gi100057)     9.57e-54            EscherichiacoliMKKMLFSAALAMLITGCAQQTFTVGNKPTAVTPKETITHHFFVSGIGQEKTVDAAKICGGAENVVKTETQQTFVNGLLGFITLGIYTPLEARVYCSQ
107587..107599                     attR                                                                                 N/A                 GGCAGAATCCTAT
108087..108437                     PHAGE_Entero_SfV_NC_003444: hypothetical protein; DT437_RS15830; phage(gi19549040)     5.64e-78            EscherichiacoliMPSRIPKACRVRGCRHTTTDPSGYCESHKSEGWKQYKPGQSRHQRGYGSKWDVIRVRVLKRDKGLCQLCLRAGVVREAKTVDHIIPKAHGGTDADSNLQSLCWPCHKAKTARERLK
108563..109057                     PHAGE_Entero_SfV_NC_003444: small terminase subunit; DT437_RS15835; phage(gi19548991)     1.40e-116           EscherichiacoliMAGTAGRSGRRPKPTARKALAGNPGKRALNKDEPVFTPIKGVEPPEWFAEEDLPLATIMWQLTTKELCGQGLLCVTDLAVLERWCVAYEFWRRAVKNIARQGNTITGAMGGMVKNPELTAKKEQESEMSSTGAMLGLDPSSRQRLIGLAGQKKATNPFLKIIES
109291..110244                     PHAGE_Entero_SfV_NC_003444: large terminase subunit; DT437_RS15840; phage(gi19548992)     0.0                 EscherichiacoliMPITLEPWQLFVICCAFGWVNKGSRLRRFREVYTEIPRKNGKSAISAGVALYCFACDNEFGAEVYSGATTEKQAWEVFRPARLMCKRTPMLTEAFGIEVNASNMNRPEDGARFEPLIGNPGDGSSPHCAVVDEYHEHATDALYTTMLTGMGARRQPLMWAITTAGYNIEGPCYDKRREVIEMLNGSVPNDELFGIIYTVDEGDDWTDPQVLEKANPNIGVSVYREFLLSQQQRAKNNARLANVFKTKHLNIWVSARSAYFNLVSWQSCEDKSLSLEQFEGQPCILAFDLARKLDMNSMARLYTREIDGKTHYYSVAPR
110243..110521                     hypothetical protein; DT437_RS15845                                                  N/A                 EscherichiacoliVTLMAGVNPVGGSMWVDIEAPEGVTEKDYQFLPSKADHFSGGKITRTFSTSKPGVYTFTFNALTYGGYEMTPVKVTINAVAAETENGEEEMP
complement(110661..111512)         PHAGE_Vibrio_VP4B_NC_042136: capsid decoration protein; DT437_RS15850; phage(gi100066)     2.84e-06            EscherichiacoliMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGLYASFRYEGNWENYPDWVRNIYLIELPARGLARVNGSDIERFYYNEDFVEKDGNDVVCEIFIPVRPV
