gi|00000000|ref|NZ_VIMU01000003.1|  Clostridioides difficile strain Gcol.A40 .cdiff_col_A40.3, whole 403113, gc%: 28.36%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(28..201)                PHAGE_Clostr_phiCD27_NC_011398: putative resolvase/integrase; FLH43_RS05075; phage(gi209901293)     7.13e-34            ClostridioidesdifficileMARIYAQRSGSLNEQDRLELLRLLGKAGYTVKVAREKQNSKTTYTYFVEYTEEQEEK
complement(262..1212)              PHAGE_Clostr_phiCD27_NC_011398: putative phage replication protein; FLH43_RS05080; phage(gi209901292)     0.0                 ClostridioidesdifficileMNFNNETYFHINFDDPFTRVPNTILDNENLSYSAIGVVTQMLRFQRSGSHKVYAKSLISYRKDSKTKVSNALKELMQEGFVIRTQIRDEKGQMKGYRYDIFDTPQNVNSESVETTESQPCAVFPTPVKPEAGKTEVGETGSRQNRGREIGNIKENSIKKKIGLKENDVITTVIAEQSEKNKTVYIKKYYESYIGVITPNNFLQLLTYLDDGMEADVIIRAVDEAVGSGVKNYKYVKTILNNWIEAGVKTVLELTEYQNEFERKKKSKQEKKQSNSKTVNTHNVNKNKFANFNQTFTQYEEKELDEIIKKSQKEKFK
complement(1221..1829)             PHAGE_Clostr_phiCD27_NC_011398: putative essential recombination function protein; FLH43_RS05085; phage(gi209901291)     1.27e-144           ClostridioidesdifficileMETNNVYIKLVNIQSTLKAPKSQFNSFGKYNYRSCEDILEGLKPILKEEKALVILDDKVVQIGTRFYVEATATLIDAETGEKVSAKALAREDETKKGMDLAQVTGSVSSYARKYALNGLFCIDDTKDSDATNTHGKEQKKREVSEDELSTLYFLGESIDKDKNRVDSEVYKKFSKLAIDLTKQEYEKVLNGYKSILDKQNQE
complement(1839..2348)             PHAGE_Clostr_phiCD27_NC_011398: hypothetical protein; FLH43_RS05090; phage(gi209901290)     2.06e-113           ClostridioidesdifficileMSTLYELTTDLLEIEEGLTEITGNEAEKLEEIKEIIKQEIQNKNTRIVSVIIDIDSDINSLDLEIKRMQELKKIKKNSLDRLKSNIKECMELLGIKKVETFLGNISIRKSAGSLVIEDEEKIPAIYKTVEQVVKVDKNTIKDFIKKGHEVEGCRIEYGTTLTIPKAKKE
2429..2441                         attL                                                                                 N/A                 TTTTTTTATATCT
complement(2434..2751)             PHAGE_Clostr_phiCD27_NC_011398: hypothetical protein; FLH43_RS05095; phage(gi209901289)     2.44e-68            ClostridioidesdifficileMESLKIVKQYVEGQLNLSSLEIDKNKETYEILKNKSSRDMLDDINLNDALREVTVNERLKIFAESLLELLDTQIKIKESEESEDYKRLCMYLDEFGRDRPIDVQI
complement(2851..3070)             hypothetical protein; FLH43_RS05100                                                  N/A                 ClostridioidesdifficileLKVNFNLEKLKNRKCSECKFEVWVQYLYCSSSNGGTKFSLLQRGMYVSSIDTRGYIWLYSKIRLG
complement(3054..3242)             PHAGE_Clostr_phiCD27_NC_011398: hypothetical protein; FLH43_RS05105; phage(gi209901287)     1.61e-37            ClostridioidesdifficileMGKKSEYTVTTVGEPNLDALGETLAKILTEKFGVLITHTYIENYYVDKERGGDVDGAIESEL
complement(3303..4091)             PHAGE_Clostr_phiCD27_NC_011398: putative antirepressor; FLH43_RS05110; phage(gi209901286)     0.0                 ClostridioidesdifficileMNDLTIIKQNNQFLVESREVAELIEKKHDNLLRDIRGYKKILEDSSNLRSQDFFIESTYINTQNKIQPCYLLTKKGCDMVANKMTGEKGIIFTAIYVTKFEEMERELKEQQPKLPTTYKEALQQLLIEVEEKEQLQLENQEKDKVIQLQQPKVLFADSVASSDNSILVGELAKLLRQNGIDTGQNRLFDWLRNNGYLIKRKGEDYNTPTQKSVDLGVIETKEGTRVHPDGHTSITKTPKITGKGQIYFINKFKKNNQISMLS
complement(4108..4278)             PHAGE_Clostr_phiCD27_NC_011398: hypothetical protein; FLH43_RS20555; phage(gi209901285)     1.52e-32            ClostridioidesdifficileMPTKSKRISITIFPELETDLDVLKKEKFYKESQSEMLRYLIKLGLQVNKEKVYKNE
4434..4607                         PHAGE_Clostr_phiCD27_NC_011398: hypothetical protein; FLH43_RS20560; phage(gi209901284)     1.91e-33            ClostridioidesdifficileMATQKPRFTITVDDELLKEIDDFRFDKRFSTRTQATIELIKLGLEKLNAEKCKETKE
complement(4748..4951)             PHAGE_Clostr_phiCD27_NC_011398: putative phage antirepressor; FLH43_RS05115; phage(gi209901283)     4.38e-43            ClostridioidesdifficileMSNNLQVIERNNKRVLTTQQLADVYETDSKNISNNFNNNKDRFIEGKHYFLLQGDDLKNFKGIHTEYQ
complement(4999..5220)             PHAGE_Clostr_phiCD27_NC_011398: putative phage repressor; FLH43_RS05120; phage(gi209901282)     7.08e-46            ClostridioidesdifficileMNISKLKGKMVEKKYTQKKLAEELGMTVQALNAKLNNRSQFKIEEAVKISNILQIEEPGEIFFDNYIPKMQRN
5374..5829                         PHAGE_Clostr_phiCD27_NC_011398: putative phage repressor; FLH43_RS05125; phage(gi209901281)     7.93e-107           ClostridioidesdifficileMNTENDLKMLEITNRIKNKRLELNMSYQDLANKTGLSKSTLQRYETGAIKNIPLDKLEILAHALDESPAFIMGWNEDCKQIKIKENKLLSSFNALNDIGQNEAIKRVDELTQIGKYVNKNHIDTIAAHNEHLHEEGEIEKIYQDLDDMDNW
5847..6320                         PHAGE_Clostr_phiCD27_NC_011398: hypothetical protein; FLH43_RS05130; phage(gi209901280)     8.52e-111           ClostridioidesdifficileMNSYEKLLSEADDNNIIVREVPLISNSHGLYKNNRIALNKNTLNNISEKACVLAEELGHHYTSYGNILDLNKVENSKQEYKARLMAYNKLIGLKGIIDSFNAGCKTITEMAEYLDVTEKFLNEALECYKSKYGFSATLDNYVIFFEPRFSIMNANFL
6385..7743                         PHAGE_Clostr_phiCD27_NC_011398: putative phage site-specific recombinase; FLH43_RS05135; phage(gi209901279)     0.0                 ClostridioidesdifficileMLRVALYIRVSTEEQALNGDSIRTQIEALEQYSKENDFNIVGKYIDEGCSATNLKRPNLQRLLRDVEKDKVDLVLMTKIDRLSRGVKNYYKIMETLEKHKCDWKTILENYDSSTAAGRLHINIMLSVAENEAAQTSERIKFVFQDKLRRKEVISGTIPIGYKIENKHLVIDKEKKYIVKAIFDEYEKSGSVRTLIETINNLHGELYSYNKIKNILRNELYIGIYNKRGFYVEDYCEPIISKKQFKQIQRILEKNKKTTPNKNIHYHIFSGLLKCKECGYTLKGNSSNVGEKLYLSYRCSTFYLNKNCVHNVTHNEKHIENYLLTNLKPQLHKHMVKLEAQNEKIRRNKKSNKKDEKKKIMKKLDKIKDLYLEDLIDKETYRKDYEKLQSQLDNITEEQESQIIDTSHIKKFLDIDINEMYSDLSRVERRRFWLSIIDYIEIDNNKNITINFI
18400..18412                       attR                                                                                 N/A                 TTTTTTTATATCT
