gi|00000000|ref|NZ_VIMV01000002.1|  Clostridioides difficile strain Gcol.A39 .cdiff_col_A39.2, whole 407979, gc%: 28.38%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
387541..387553                     attL                                                                                 N/A                 ATATTTAAAAATA
complement(400238..401596)         PHAGE_Clostr_phiCD27_NC_011398: putative phage site-specific recombinase; FLH42_RS04705; phage(gi209901279)     0.0                 ClostridioidesdifficileMLRVALYIRVSTEEQALNGDSIRTQIEALEQYSKENDFNIVGKYIDEGCSATNLKRPNLQRLLRDVEKDKVDLVLMTKIDRLSRGVKNYYKIMETLEKHKCDWKTILENYDSSTAAGRLHINIMLSVAENEAAQTSERIKFVFQDKLRRKEVISGTIPIGYKIENKHLVIDKEKKYIVKAIFDEYEKSGSVRTLIETINNLHGELYSYNKIKNILRNELYIGIYNKRGFYVEDYCEPIISKKQFKQIQRILEKNKKTTPNKNIHYHIFSGLLKCKECGYTLKGNSSNVGEKLYLSYRCSTFYLNKNCVHNVTHNEKHIENYLLTNLKPQLHKHMVKLEAQNEKIRRNKKSNKKDEKKKIMKKLDKIKDLYLEDLIDKETYRKDYEKLQSQLDNITEEQESQIIDTSHIKKFLDIDINEMYSDLSRVERRRFWLSIIDYIEIDNNKNITINFI
complement(401661..402134)         PHAGE_Clostr_phiCD27_NC_011398: hypothetical protein; FLH42_RS04710; phage(gi209901280)     8.52e-111           ClostridioidesdifficileMNSYEKLLSEADDNNIIVREVPLISNSHGLYKNNRIALNKNTLNNISEKACVLAEELGHHYTSYGNILDLNKVENSKQEYKARLMAYNKLIGLKGIIDSFNAGCKTITEMAEYLDVTEKFLNEALECYKSKYGFSATLDNYVIFFEPRFSIMNANFL
complement(402152..402607)         PHAGE_Clostr_phiCD27_NC_011398: putative phage repressor; FLH42_RS04715; phage(gi209901281)     7.93e-107           ClostridioidesdifficileMNTENDLKMLEITNRIKNKRLELNMSYQDLANKTGLSKSTLQRYETGAIKNIPLDKLEILAHALDESPAFIMGWNEDCKQIKIKENKLLSSFNALNDIGQNEAIKRVDELTQIGKYVNKNHIDTIAAHNEHLHEEGEIEKIYQDLDDMDNW
402761..402982                     PHAGE_Clostr_phiCD27_NC_011398: putative phage repressor; FLH42_RS04720; phage(gi209901282)     7.08e-46            ClostridioidesdifficileMNISKLKGKMVEKKYTQKKLAEELGMTVQALNAKLNNRSQFKIEEAVKISNILQIEEPGEIFFDNYIPKMQRN
403030..403233                     PHAGE_Clostr_phiCD27_NC_011398: putative phage antirepressor; FLH42_RS04725; phage(gi209901283)     4.38e-43            ClostridioidesdifficileMSNNLQVIERNNKRVLTTQQLADVYETDSKNISNNFNNNKDRFIEGKHYFLLQGDDLKNFKGIHTEYQ
complement(403374..403547)         PHAGE_Clostr_phiCD27_NC_011398: hypothetical protein; FLH42_RS20515; phage(gi209901284)     1.91e-33            ClostridioidesdifficileMATQKPRFTITVDDELLKEIDDFRFDKRFSTRTQATIELIKLGLEKLNAEKCKETKE
403703..403873                     PHAGE_Clostr_phiCD27_NC_011398: hypothetical protein; FLH42_RS20520; phage(gi209901285)     1.52e-32            ClostridioidesdifficileMPTKSKRISITIFPELETDLDVLKKEKFYKESQSEMLRYLIKLGLQVNKEKVYKNE
403890..404678                     PHAGE_Clostr_phiCD27_NC_011398: putative antirepressor; FLH42_RS04730; phage(gi209901286)     0.0                 ClostridioidesdifficileMNDLTIIKQNNQFLVESREVAELIEKKHDNLLRDIRGYKKILEDSSNLRSQDFFIESTYINTQNKIQPCYLLTKKGCDMVANKMTGEKGIIFTAIYVTKFEEMERELKEQQPKLPTTYKEALQQLLIEVEEKEQLQLENQEKDKVIQLQQPKVLFADSVASSDNSILVGELAKLLRQNGIDTGQNRLFDWLRNNGYLIKRKGEDYNTPTQKSVDLGVIETKEGTRVHPDGHTSITKTPKITGKGQIYFINKFKKNNQISMLS
404739..404927                     PHAGE_Clostr_phiCD27_NC_011398: hypothetical protein; FLH42_RS04735; phage(gi209901287)     1.61e-37            ClostridioidesdifficileMGKKSEYTVTTVGEPNLDALGETLAKILTEKFGVLITHTYIENYYVDKERGGDVDGAIESEL
404911..405130                     hypothetical protein; FLH42_RS04740                                                  N/A                 ClostridioidesdifficileLKVNFNLEKLKNRKCSECKFEVWVQYLYCSSSNGGTKFSLLQRGMYVSSIDTRGYIWLYSKIRLG
405230..405547                     PHAGE_Clostr_phiCD27_NC_011398: hypothetical protein; FLH42_RS04745; phage(gi209901289)     2.44e-68            ClostridioidesdifficileMESLKIVKQYVEGQLNLSSLEIDKNKETYEILKNKSSRDMLDDINLNDALREVTVNERLKIFAESLLELLDTQIKIKESEESEDYKRLCMYLDEFGRDRPIDVQI
405582..405594                     attR                                                                                 N/A                 ATATTTAAAAATA
405633..406142                     PHAGE_Clostr_phiCD27_NC_011398: hypothetical protein; FLH42_RS04750; phage(gi209901290)     2.06e-113           ClostridioidesdifficileMSTLYELTTDLLEIEEGLTEITGNEAEKLEEIKEIIKQEIQNKNTRIVSVIIDIDSDINSLDLEIKRMQELKKIKKNSLDRLKSNIKECMELLGIKKVETFLGNISIRKSAGSLVIEDEEKIPAIYKTVEQVVKVDKNTIKDFIKKGHEVEGCRIEYGTTLTIPKAKKE
406152..406760                     PHAGE_Clostr_phiCD27_NC_011398: putative essential recombination function protein; FLH42_RS04755; phage(gi209901291)     1.27e-144           ClostridioidesdifficileMETNNVYIKLVNIQSTLKAPKSQFNSFGKYNYRSCEDILEGLKPILKEEKALVILDDKVVQIGTRFYVEATATLIDAETGEKVSAKALAREDETKKGMDLAQVTGSVSSYARKYALNGLFCIDDTKDSDATNTHGKEQKKREVSEDELSTLYFLGESIDKDKNRVDSEVYKKFSKLAIDLTKQEYEKVLNGYKSILDKQNQE
406769..407719                     PHAGE_Clostr_phiCD27_NC_011398: putative phage replication protein; FLH42_RS04760; phage(gi209901292)     0.0                 ClostridioidesdifficileMNFNNETYFHINFDDPFTRVPNTILDNENLSYSAIGVVTQMLRFQRSGSHKVYAKSLISYRKDSKTKVSNALKELMQEGFVIRTQIRDEKGQMKGYRYDIFDTPQNVNSESVETTESQPCAVFPTPVKPEAGKTEVGETGSRQNRGREIGNIKENSIKKKIGLKENDVITTVIAEQSEKNKTVYIKKYYESYIGVITPNNFLQLLTYLDDGMEADVIIRAVDEAVGSGVKNYKYVKTILNNWIEAGVKTVLELTEYQNEFERKKKSKQEKKQSNSKTVNTHNVNKNKFANFNQTFTQYEEKELDEIIKKSQKEKFK
407780..407953                     PHAGE_Clostr_phiCD27_NC_011398: putative resolvase/integrase; FLH42_RS04765; phage(gi209901293)     7.13e-34            ClostridioidesdifficileMARIYAQRSGSLNEQDRLELLRLLGKAGYTVKVAREKQNSKTTYTYFVEYTEEQEEK
