gi|00000000|ref|NZ_VIMX01000002.1|  Clostridioides difficile strain Gcol.A37 .cdiff_col_A37.2, whole 403090, gc%: 28.36%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
382645..382657                     attL                                                                                 N/A                 ATATTTAAAAATA
complement(395342..396700)         PHAGE_Clostr_phiCD27_NC_011398: putative phage site-specific recombinase; FLH40_RS05820; phage(gi209901279)     0.0                 ClostridioidesdifficileMLRVALYIRVSTEEQALNGDSIRTQIEALEQYSKENDFNIVGKYIDEGCSATNLKRPNLQRLLRDVEKDKVDLVLMTKIDRLSRGVKNYYKIMETLEKHKCDWKTILENYDSSTAAGRLHINIMLSVAENEAAQTSERIKFVFQDKLRRKEVISGTIPIGYKIENKHLVIDKEKKYIVKAIFDEYEKSGSVRTLIETINNLHGELYSYNKIKNILRNELYIGIYNKRGFYVEDYCEPIISKKQFKQIQRILEKNKKTTPNKNIHYHIFSGLLKCKECGYTLKGNSSNVGEKLYLSYRCSTFYLNKNCVHNVTHNEKHIENYLLTNLKPQLHKHMVKLEAQNEKIRRNKKSNKKDEKKKIMKKLDKIKDLYLEDLIDKETYRKDYEKLQSQLDNITEEQESQIIDTSHIKKFLDIDINEMYSDLSRVERRRFWLSIIDYIEIDNNKNITINFI
complement(396765..397238)         PHAGE_Clostr_phiCD27_NC_011398: hypothetical protein; FLH40_RS05825; phage(gi209901280)     8.52e-111           ClostridioidesdifficileMNSYEKLLSEADDNNIIVREVPLISNSHGLYKNNRIALNKNTLNNISEKACVLAEELGHHYTSYGNILDLNKVENSKQEYKARLMAYNKLIGLKGIIDSFNAGCKTITEMAEYLDVTEKFLNEALECYKSKYGFSATLDNYVIFFEPRFSIMNANFL
complement(397256..397711)         PHAGE_Clostr_phiCD27_NC_011398: putative phage repressor; FLH40_RS05830; phage(gi209901281)     7.93e-107           ClostridioidesdifficileMNTENDLKMLEITNRIKNKRLELNMSYQDLANKTGLSKSTLQRYETGAIKNIPLDKLEILAHALDESPAFIMGWNEDCKQIKIKENKLLSSFNALNDIGQNEAIKRVDELTQIGKYVNKNHIDTIAAHNEHLHEEGEIEKIYQDLDDMDNW
397865..398086                     PHAGE_Clostr_phiCD27_NC_011398: putative phage repressor; FLH40_RS05835; phage(gi209901282)     7.08e-46            ClostridioidesdifficileMNISKLKGKMVEKKYTQKKLAEELGMTVQALNAKLNNRSQFKIEEAVKISNILQIEEPGEIFFDNYIPKMQRN
398134..398337                     PHAGE_Clostr_phiCD27_NC_011398: putative phage antirepressor; FLH40_RS05840; phage(gi209901283)     4.38e-43            ClostridioidesdifficileMSNNLQVIERNNKRVLTTQQLADVYETDSKNISNNFNNNKDRFIEGKHYFLLQGDDLKNFKGIHTEYQ
complement(398478..398651)         PHAGE_Clostr_phiCD27_NC_011398: hypothetical protein; FLH40_RS20525; phage(gi209901284)     1.91e-33            ClostridioidesdifficileMATQKPRFTITVDDELLKEIDDFRFDKRFSTRTQATIELIKLGLEKLNAEKCKETKE
398807..398977                     PHAGE_Clostr_phiCD27_NC_011398: hypothetical protein; FLH40_RS20530; phage(gi209901285)     1.52e-32            ClostridioidesdifficileMPTKSKRISITIFPELETDLDVLKKEKFYKESQSEMLRYLIKLGLQVNKEKVYKNE
398994..399782                     PHAGE_Clostr_phiCD27_NC_011398: putative antirepressor; FLH40_RS05845; phage(gi209901286)     0.0                 ClostridioidesdifficileMNDLTIIKQNNQFLVESREVAELIEKKHDNLLRDIRGYKKILEDSSNLRSQDFFIESTYINTQNKIQPCYLLTKKGCDMVANKMTGEKGIIFTAIYVTKFEEMERELKEQQPKLPTTYKEALQQLLIEVEEKEQLQLENQEKDKVIQLQQPKVLFADSVASSDNSILVGELAKLLRQNGIDTGQNRLFDWLRNNGYLIKRKGEDYNTPTQKSVDLGVIETKEGTRVHPDGHTSITKTPKITGKGQIYFINKFKKNNQISMLS
399843..400031                     PHAGE_Clostr_phiCD27_NC_011398: hypothetical protein; FLH40_RS05850; phage(gi209901287)     1.61e-37            ClostridioidesdifficileMGKKSEYTVTTVGEPNLDALGETLAKILTEKFGVLITHTYIENYYVDKERGGDVDGAIESEL
400015..400234                     hypothetical protein; FLH40_RS05855                                                  N/A                 ClostridioidesdifficileLKVNFNLEKLKNRKCSECKFEVWVQYLYCSSSNGGTKFSLLQRGMYVSSIDTRGYIWLYSKIRLG
400334..400651                     PHAGE_Clostr_phiCD27_NC_011398: hypothetical protein; FLH40_RS05860; phage(gi209901289)     2.44e-68            ClostridioidesdifficileMESLKIVKQYVEGQLNLSSLEIDKNKETYEILKNKSSRDMLDDINLNDALREVTVNERLKIFAESLLELLDTQIKIKESEESEDYKRLCMYLDEFGRDRPIDVQI
400686..400698                     attR                                                                                 N/A                 ATATTTAAAAATA
400737..401246                     PHAGE_Clostr_phiCD27_NC_011398: hypothetical protein; FLH40_RS05865; phage(gi209901290)     2.06e-113           ClostridioidesdifficileMSTLYELTTDLLEIEEGLTEITGNEAEKLEEIKEIIKQEIQNKNTRIVSVIIDIDSDINSLDLEIKRMQELKKIKKNSLDRLKSNIKECMELLGIKKVETFLGNISIRKSAGSLVIEDEEKIPAIYKTVEQVVKVDKNTIKDFIKKGHEVEGCRIEYGTTLTIPKAKKE
401256..401864                     PHAGE_Clostr_phiCD27_NC_011398: putative essential recombination function protein; FLH40_RS05870; phage(gi209901291)     1.27e-144           ClostridioidesdifficileMETNNVYIKLVNIQSTLKAPKSQFNSFGKYNYRSCEDILEGLKPILKEEKALVILDDKVVQIGTRFYVEATATLIDAETGEKVSAKALAREDETKKGMDLAQVTGSVSSYARKYALNGLFCIDDTKDSDATNTHGKEQKKREVSEDELSTLYFLGESIDKDKNRVDSEVYKKFSKLAIDLTKQEYEKVLNGYKSILDKQNQE
401873..402823                     PHAGE_Clostr_phiCD27_NC_011398: putative phage replication protein; FLH40_RS05875; phage(gi209901292)     0.0                 ClostridioidesdifficileMNFNNETYFHINFDDPFTRVPNTILDNENLSYSAIGVVTQMLRFQRSGSHKVYAKSLISYRKDSKTKVSNALKELMQEGFVIRTQIRDEKGQMKGYRYDIFDTPQNVNSESVETTESQPCAVFPTPVKPEAGKTEVGETGSRQNRGREIGNIKENSIKKKIGLKENDVITTVIAEQSEKNKTVYIKKYYESYIGVITPNNFLQLLTYLDDGMEADVIIRAVDEAVGSGVKNYKYVKTILNNWIEAGVKTVLELTEYQNEFERKKKSKQEKKQSNSKTVNTHNVNKNKFANFNQTFTQYEEKELDEIIKKSQKEKFK
402884..403057                     PHAGE_Clostr_phiCD27_NC_011398: putative resolvase/integrase; FLH40_RS05880; phage(gi209901293)     7.13e-34            ClostridioidesdifficileMARIYAQRSGSLNEQDRLELLRLLGKAGYTVKVAREKQNSKTTYTYFVEYTEEQEEK
