gi|00000000|ref|NZ_WRZR01000037.1|  Salmonella enterica subsp. enterica serovar Typhimurium strain 44187, gc%: 49.49%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
58..69                             attL                                                                                 N/A                 TGGCTCCGGTTG
complement(348..800)               PHAGE_Salmon_ST64T_NC_004348: hypothetical protein; GPV46_RS13435; phage(gi24371579)     2.89e-105           SalmonellaentericasubspentericaserovarTyphimuriumMKISLKSLIVPVVMLLLTATAYIYHGKYQDELARAESAESNLVLANLTIADMQKRQRDVAKLDARYTKELADANATIESLRADVSAGRKRLQVAATCAKSTTGAGGMVDGESPRLTANAELNYYRLRSGIDRITAQVNYLQEYVRTQCLK
complement(797..1195)              PHAGE_Salmon_ST64T_NC_004348: hypothetical protein; GPV46_RS13440; phage(gi24371578)     1.61e-93            SalmonellaentericasubspentericaserovarTyphimuriumMQTNKFKFSQRSEKNLNGVNPDLVKVIRRALEITPVDFIVIEGVRTQARQKDMVATGKSQTMNSRHLSGNAVDIIPVNTTWKIEEFKPLLKAVKQAADEQGMKLRFGINWKHDPSLPIETKFIDAPHVEIPA
complement(1182..1499)             PHAGE_Salmon_ST64T_NC_004348: holin protein; GPV46_RS13445; phage(gi24371577)        5.30e-70            SalmonellaentericasubspentericaserovarTyphimuriumMAKRMNDDHKIVGLSWLILLGIACWGGLVRYLIDVKQNKATWSWINAFAQIAVSGFTGLIGGLISVEGGLSFHMILVTSGISGAMGSVALTYFWERLTGMKNANQ
complement(1685..1756)             tRNA                                                                                 N/A                 GCTGGTTTAGCTCAATGGTTGGAGCGCCTTCCTAAGAAGGGAGTTGCGGTTCAGTTCCGTCAATCAGCACCA
complement(1762..1836)             tRNA                                                                                 N/A                 GGGTCAGTCGTATAAAGGTCATTACGGAAGGCTGTTAACCTTCTTATCGTGGTTCGAGTCCACGCTGTCCCGCCA
complement(1899..2417)             PHAGE_Salmon_118970_sal4_NC_030919: putative phosphoesterase; GPV46_RS13460; phage(gi100037)     9.27e-127           SalmonellaentericasubspentericaserovarTyphimuriumMSIRELNLTKEQHDWLNGWLELWGAWVYSGRLEKRMSSVIAKFMESVEPGRVMTRPMCNDDDGMLISQVVDSVMYIDKKAFGILLSYYAHGSSKRAIASYYHATAKPRKMCGRGGDGWRKPSLATCRNEIDDILKASLFVLYQPMQNAFKMRKRVEKVKHVAVKSLDMQLSI
complement(2414..2593)             PHAGE_Salmon_ST64T_NC_004348: hypothetical protein; GPV46_RS13465; phage(gi24371575)     1.94e-36            SalmonellaentericasubspentericaserovarTyphimuriumMTVTSINQAKQQRERDEAELRSVREMTEQHQKAMNYLHERERELVNRLGLNKPAGGDAA
complement(2574..2777)             PHAGE_Salmon_UPF_BP1_NC_047875: hypothetical protein; GPV46_RS13470; phage(gi100021)     1.09e-43            SalmonellaentericasubspentericaserovarTyphimuriumMTHTVKTIPDMLIETYGNQTEVARRLSCHRNTVRRYLYDKEARYHAIVNGVLMIHQGGRGIYDRNQH
complement(2774..3169)             PHAGE_Salmon_ST64T_NC_004348: endodeoxyribonuclease; GPV46_RS13475; phage(gi24371573)     1.54e-93            SalmonellaentericasubspentericaserovarTyphimuriumMKTYRIKLPWPPSNNRYWRHSRGVHYISDWGKRYRREVIEIIQQQQLDLKITPRIRITILAAPPDNRKRDLDNLPKAVFDALTSAGFWLDDGQIDDMRIKRCQAIKGGMLVLVVTETCGNLPMITELLEAA
complement(3166..3456)             PHAGE_Salmon_ST64T_NC_004348: hypothetical protein; GPV46_RS13480; phage(gi24371572)     2.24e-67            SalmonellaentericasubspentericaserovarTyphimuriumMANLRKEARGRECQVRIYGVCNGNPETTVLAHYRMAGICGTGMKPDDLIGAWACSACHDEIDRRTHILDNKDARLYHLEGVIRTQAILLKEGKIKA
complement(3449..3751)             PHAGE_Salmon_ST64T_NC_004348: hypothetical protein; GPV46_RS13485; phage(gi24371571)     2.12e-69            SalmonellaentericasubspentericaserovarTyphimuriumMSELRAGGIAIVIFSENKPEIGRCVELIEKVTNGYVFNFPGAGKHGWRDDAPGWLVKGDVSIYTNKPSGGFSYFYSDELMPIDGEDFSHEDEQQKELANG
complement(3744..3917)             PHAGE_Salmon_ST64T_NC_004348: hypothetical protein; GPV46_RS13490; phage(gi24371570)     5.50e-35            SalmonellaentericasubspentericaserovarTyphimuriumMLSPSQSLQYQKESVERALTCANCGQKLHVLEVHVCSDCCAELMADPNGQMLEEDDE
complement(3910..4251)             PHAGE_Salmon_ST64T_NC_004348: hypothetical protein; GPV46_RS13495; phage(gi24371569)     1.21e-81            SalmonellaentericasubspentericaserovarTyphimuriumMDYSQLSDFEINRMVGDIIFKGLWACKPETSGNNTNKWYYGNADTTFEPLNHLPDYCNDPSASWPIIEKHRISILDQLTEWCVDAKGVSPIFDTRPLRAAMIVFLMMQDANNA
complement(4254..4430)             PHAGE_Salmon_ST64T_NC_004348: hypothetical protein; GPV46_RS13500; phage(gi24371568)     2.41e-36            SalmonellaentericasubspentericaserovarTyphimuriumMARQRRSITDIICENCKYLPTKRSRNKPKPIPKESDVKTFNYTAHLWDIRWLRERARK
complement(4397..4570)             PHAGE_Salmon_ST64T_NC_004348: hypothetical protein; GPV46_RS13505; phage(gi24371567)     2.84e-37            SalmonellaentericasubspentericaserovarTyphimuriumMKRCYRCGESKDDYRFRPNQPYWHQWCIRCDRSPVGNFPLPETKEDVWHDSDEVSPT
complement(4567..4998)             PHAGE_Salmon_vB_SemP_Emek_NC_018275: NinB; GPV46_RS13510; phage(gi399498846)         1.07e-95            SalmonellaentericasubspentericaserovarTyphimuriumMLRNEAIRNNAIDAILSLLIDDKSPHEVHVKAPKRTKAQNDRMWPMLHDVSRQVLWHGQRLSPEDWKDIFTALWLKTKKLEQRSVPGIDGGVVLLGVRTSKMRKASMTELIEIMFWFGSERNVRWSDDSRRECEWSQLTGRVA
complement(4970..5266)             PHAGE_Salmon_ST64T_NC_004348: hypothetical protein; GPV46_RS13515; phage(gi24371565)     1.54e-65            SalmonellaentericasubspentericaserovarTyphimuriumMSKVSRGMKISLIFILNPHRIFLASAVWLSDFVYWLADKLDDFARWLESFANARFWLWPLIGERMSDELNRYYADKRKEKSRRASEAIIPASQRSNQK
complement(5269..5517)             PHAGE_Salmon_ST64T_NC_004348: hypothetical protein; GPV46_RS13520; phage(gi24371564)     8.06e-54            SalmonellaentericasubspentericaserovarTyphimuriumMDESRKAFEQWFQSKYKCTMETMKVMQIKVELAWEAWQASREAIEIKLDDKVMVEDEFDKGHNCAIDYCADVIRAAGIKVKE
complement(5748..6020)             PHAGE_Salmon_ST64T_NC_004348: hypothetical protein; GPV46_RS13525; phage(gi24371562)     4.27e-61            SalmonellaentericasubspentericaserovarTyphimuriumMKDLLVTLNVGLSLLGYAYIMFKTGQWIITNALKQWDKRRKVSAKQKAVDALYEAYELDKVSEGDTVKVATKEGLVIMICRHEKTNTPAH
complement(6095..7531)             PHAGE_Salmon_ST64T_NC_004348: hypothetical protein; GPV46_RS13530; phage(gi24371561)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMTDNFYAPPHSIEAEQAVIGGLLLDDDSSERVQKVLAMLKPDSFYSRPHKILFEEITRMHREQKPVDGLTLFDELERKSLTVSVGGFAYIADIAKNTPSAANIVAYAMQVRETAMERYAINRMTEATELLYSRNGMTATQKYEAIQAIFTQLTDHAKTGSRRGLRSFGEVMEDWVGDLDKRFDPSGEQRGMSTGIPSLDRMLSPKGLVKGSLFVIGARPKMGKTTLYSQMAINCAVHEKKPALMFSLEMPGDQILEKLVGQKSGVNPNIFYLPATNDADDGYQGDYDGDFNRAIETANRLSEIDMLYIDDTPGLSLAQIVSESRRIKREKGCIGMILVDYLTLMTAEKADRNDLAYGMITKGLKNLAKELDCVVVLLTQLNRALENRTNKRPLPSDSRDTGQIEQDCDYWVGIHREGAFDDSVPPGETELILRLNRHGNTGTVYCIQANGAIYDTDQQSAEMRRREREEPQSKKKGGF
complement(7521..8420)             PHAGE_Salmon_ST64T_NC_004348: hypothetical protein; GPV46_RS13535; phage(gi24371560)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSNISNLAEAREARRIQKPRTNGGKGFALIHRQFMDSKLYKDSQAVHLFLHLILKANHSPAVVNTDIGEMLVERGQLITGRPKLVSETFIPDNKVKSLLRSFEGNGMICIESKGRKFSLITVLKYDDFQAPNCPTDVQRMSNANTSNDAAHSKCCPTDVQRLSINNNINNISNTNVLESTAADENPDKKKSALSCQDVVDAYHELLPEASRVRALNDKRKNQIRTFWRKAGVITRQLDGHGFTMQDWRNYLSYVGENCRWMFEERQNHQRGTVWHKKGFDFLLNDNTYLKVREGEHDDR
complement(8413..8559)             PHAGE_Salmon_UPF_BP1_NC_047875: hypothetical protein; GPV46_RS13540; phage(gi100009)     3.47e-27            SalmonellaentericasubspentericaserovarTyphimuriumMPKQLSPDQDKLHKNILRDRFLSSFKQPGRFRAELEKVKLILKRKGHE
complement(8594..8875)             PHAGE_Salmon_ST64T_NC_004348: transcriptional activator; GPV46_RS13545; phage(gi24371559)     2.00e-62            SalmonellaentericasubspentericaserovarTyphimuriumMNVVATKSKKAARIESTLLNKLAMMGQKTFAKAMGVPEYQVSRWKNGFFSQVSMMLAVLEYGIEDEEMAELTRRLATYLTKEKAPKNGEFFEA
complement(8986..9201)             PHAGE_Salmon_ST64T_NC_004348: antirepressor protein; GPV46_RS13550; phage(gi24371558)     1.60e-47            SalmonellaentericasubspentericaserovarTyphimuriumMSNLRKIRETMKVSQAVLAEKVGCTQGAIGHYESGRRHPDLRMCRQLVEALNSFGANVQLDDVFPPELNAA
9320..9982                         PHAGE_Salmon_ST64T_NC_004348: repressor protein; GPV46_RS13555; phage(gi24371557)     1.39e-162           SalmonellaentericasubspentericaserovarTyphimuriumMKTPWNELAKARMKQIGLTQDKLAEALGKTQGAIGHWLNGRREPSIEDIAAIMKQLGLKELVLSSDGMVDYPDSSLSNVSSPRPHTEIRRFPLISWVSAGNWCEAVEPYQLREIEVWPETTAHASERSFWLTVRGDSMTSPTGLSIPEGMQILVDPAIEPTNGRLVVAKLESENEATFKKYIVDAGQKYLKPLNPSYHMIPINGNCRIIGVVIEAKWQGL
complement(10120..10317)           PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; GPV46_RS13560; phage(gi100075)     4.46e-17            SalmonellaentericasubspentericaserovarTyphimuriumMALVLQIARRLTLTAYSLPSASAEEVGFYLQPKPISFGICSRFVSASSKLKSVAFPFGYQRPADG
10337..10519                       PHAGE_Erwini_vB_EhrS_59_NC_048198: recombination protein; GPV46_RS13565; phage(gi100049)     6.16e-13            SalmonellaentericasubspentericaserovarTyphimuriumMRKPKTTTKTIIHFTLKRRPEGNRNGDERGRVWFHKYSFLDKPFYRAPLLVRRLSFNFNQ
10540..10878                       PHAGE_Salmon_ST64T_NC_004348: antitermination protein; GPV46_RS13570; phage(gi24371556)     2.20e-77            SalmonellaentericasubspentericaserovarTyphimuriumMTVITYGKSTFAGNAKTRRHERRRKLAIERDTICNIIDSIFGCDVPDASHEVKAKRIDRVTKAISLAGTRQKKVEVTAVKKNRIYYRDVNPLGNKIHAVQKQRGKSIPAYYD
10957..11151                       PHAGE_Salmon_ST64T_NC_004348: hypothetical protein; GPV46_RS13575; phage(gi24371555)     5.98e-40            SalmonellaentericasubspentericaserovarTyphimuriumMTTTIDTNQWCSRFVKCKGCKLDAECMVKPEEMALVREDGKIVDKWAIRTTAMIARELEKLKAT
11235..11819                       PHAGE_Salmon_ST64T_NC_004348: hypothetical protein; GPV46_RS13580; phage(gi24371554)     1.29e-118           SalmonellaentericasubspentericaserovarTyphimuriumMNSADLSKILEEHKVWITSMRESGSRADLCGTNLRGADLRGADLRGANLCGADLRGANLCGANLCGADLRGANLCGANLCGADLRGANLRGANLCGADLRGANLCDADLPDLTFVILGEKYFISITNGEYVRAGCQNHTVEEWRKYSKQEIAEMDGRKALKFYPRLLDIIDFYIGKGERPDWLTSKEYADEVTG
11991..12305                       PHAGE_Salmon_ST64T_NC_004348: superinfection exclusion protein; GPV46_RS13585; phage(gi24371553)     1.52e-72            SalmonellaentericasubspentericaserovarTyphimuriumMKLRVWHIPQVPMKPFIVEVASVEEGVRVMDALADYDAFQYDNNIKPDYCNANGLEMWDESLTDQDLEEMELTDRWVDWYSECQCYDDPREYIESLKEETTAAA
12390..12536                       PHAGE_Salmon_ST64T_NC_004348: hypothetical protein; GPV46_RS13590; phage(gi24371552)     1.48e-28            SalmonellaentericasubspentericaserovarTyphimuriumMTFAIAGGAVMGIAHLNESLLERITRKLRAGWKRLVDILNQPGVPCNG
12529..12642                       PHAGE_Salmon_ST64T_NC_004348: hypothetical protein; GPV46_RS13595; phage(gi24371599)     2.21e-19            SalmonellaentericasubspentericaserovarTyphimuriumMDKSLMAIQSKFAIAVYLGDKIMYREAVEAFREWRLK
12836..13543                       PHAGE_Salmon_ST64T_NC_004348: hypothetical protein; GPV46_RS13600; phage(gi24371550)     1.01e-176           SalmonellaentericasubspentericaserovarTyphimuriumMDLNKFDAPFNPEDIEWRIQQSGKTRDGKVWAMVLAYVTNRAIMKRLDDVCGKEGWRNEYRDIPNNGGVECGISIKIDSEWVTKWDAAENTQVEAVKGGRSGAMKRAAVQWGIGRYLYNLEEGFAQISSDKKQGWHRAKLKDGTGFYWLPPSLPDWAMPASCNQPSPENTNQKSPSVDCEQILKDFSDYAATETDKKKLIERYQHDWQLLAGHDDAQTRCVQVMNIRINELKQVA
13543..13827                       PHAGE_Salmon_ST64T_NC_004348: hypothetical protein; GPV46_RS13605; phage(gi24371549)     1.32e-64            SalmonellaentericasubspentericaserovarTyphimuriumMRRLNITPAEMESVCGRMVACRAAEHLGLNINQFYYIAKKLSLKTAFVKPRWSDDEDKKMQALISSGYTQRNVAKILGRSEESVKSRLSRLRKK
13874..14167                       PHAGE_Salmon_ST64T_NC_004348: hypothetical protein; GPV46_RS13610; phage(gi24371548)     1.59e-67            SalmonellaentericasubspentericaserovarTyphimuriumMPAPLYGADDPRRCSGNSVSEVLEKFRKNYDLIMSLPQETKEEKEFRHCIWLAEKEERERIYQTSIRPFRKATYTQFIEIDPRLKNYRSRYGAISNN
14178..14348                       PHAGE_Salmon_ST64T_NC_004348: hypothetical protein; GPV46_RS13615; phage(gi24371598)     4.62e-34            SalmonellaentericasubspentericaserovarTyphimuriumMRGLSYDPGILPSEMIIRHRFKPINDIPREEMLKRNSFGSVNENKYLNAMLRSGKK
14345..14722                       PHAGE_Salmon_ST64T_NC_004348: hypothetical protein; GPV46_RS13620; phage(gi24371547)     3.49e-88            SalmonellaentericasubspentericaserovarTyphimuriumMKEVKIYTIVSDQLSPPITGESFCTDMVRHSDYAELEDKYAALAEVRASARNEGINYAASRLAAAFNHGFLDKPVSEVLDVTRMILSAKEDLANDPLPADDGLSGEYAEKAIEEWETQLRQEAAQ
14719..15240                       PHAGE_Salmon_ST64T_NC_004348: hypothetical protein; GPV46_RS13625; phage(gi24371545)     1.80e-73            SalmonellaentericasubspentericaserovarTyphimuriumMSNIDKRALREVAERATPGNWRRTSSLFNGITVTPFSLCGEEVTLAHTVEKRDAEFIAAANPATMLALLDELETKEEQRANWFRMAQKLGEDLDTAERLIAELDQRLIEYAGIATREARRVAELEARKVNLSKLSVGEVMHMSGFSRDYAEGWCAGNDNAIHEIRTAGIKVKG
15243..15473                       PHAGE_Salmon_vB_SemP_Emek_NC_018275: hypothetical protein; GPV46_RS13630; phage(gi399498825)     1.33e-51            SalmonellaentericasubspentericaserovarTyphimuriumMAKTQMQLANRAWRTETKALGWHQGQSWKGGRKAWKAFCRENAAITVEEHLKTDPPFEDQDDANYHVAEELTYWTN
15507..15782                       PHAGE_Salmon_vB_SemP_Emek_NC_018275: hypothetical protein; GPV46_RS13635; phage(gi399498824)     1.46e-63            SalmonellaentericasubspentericaserovarTyphimuriumMARIFLRYPTECVNDAGRMVIRYAPHEIAGFRFDDGQWVSATDIARLGNYEIRCNKCKSNDWTENGRFINEYECGCCGAFIAVEPKNKWQN
15770..16033                       PHAGE_Salmon_ST64T_NC_004348: hypothetical protein; GPV46_RS13640; phage(gi24371544)     1.20e-59            SalmonellaentericasubspentericaserovarTyphimuriumMAKLTKKEQAWIDEVNAVLARCPSPKKIGFYTIGDSNIHLYDLRKYNEVEKALDTGKAADWSPACRVAGAHIEGAIDFPSPVESTAG
16044..16859                       PHAGE_Salmon_ST64T_NC_004348: hypothetical protein; GPV46_RS13645; phage(gi24371543)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMTTITKEWLQQTIAEFENTRDDIPFGLDDDDAKILIVLKRALASLYAESVRYLNKFSGTCVTLEQQPNAADDVAVYIPLYAAPPVQETGVYNDVLNIIGLLKKNERAEHCTSTVLGSLLESEITRLVGKEQPAPERNRIRREHAEWSDKTFGDVGPVGPLKHLSKEALEAAADPSDPLEWADMQFLLWDAQRRAGVTDEQITMAMVEKLAINKARQWPEPKDGEPRLHIKEQPAPVVPDEMATSDDMNLYQKSFAQGYNACRNAMLNGGKS
16892..17401                       PHAGE_Salmon_ST64T_NC_004348: hypothetical protein; GPV46_RS13650; phage(gi24371542)     9.71e-125           SalmonellaentericasubspentericaserovarTyphimuriumMHDIAIEYHGTQQLRERIARTVRAALHHDLEKLNQPVSQTYELPELIEGMEVSIDVSTCDADAGNRYFGTVTEVSELDTAKNGYILLVQDAEPNFDVNGNSPVIPGGWISCSERMPDNDESKPIAIFTGKCLGQGMFVATYDDDGFFDYWEGMEIIGVSHWMQLPDPPL
17498..17677                       PHAGE_Salmon_ST64T_NC_004348: hypothetical protein; GPV46_RS13655; phage(gi24371541)     1.48e-36            SalmonellaentericasubspentericaserovarTyphimuriumMSCPKCGSGNIAKEKTMRGWSDDYVCCDCGYNDSKDAFGERGKNEFVRINKERKGNEKS
17778..18407                       PHAGE_Salmon_ST64T_NC_004348: Eac protein; GPV46_RS13660; phage(gi24371540)          3.82e-155           SalmonellaentericasubspentericaserovarTyphimuriumMSDQSKYYDYYMVEGEDVKELIQSYDTINDQRNSILTTAAEKVGANAWTTTSSWGGEGGLLQSFVWEKGYEFPCQITIKHEDFWDGKRVVIARGKGNTKEGRAYNKELDAIIHNANAKLKSLPEWNYYITNHYGIMRTGIGGQSGRGLGFVMLSTYGGKHPKRNDCLIFAIPNNKEERHGEVVIPDSFKKITYGKFYDIANEVEEEAVE
18410..18724                       PHAGE_Salmon_ST64T_NC_004348: excisionase; GPV46_RS13665; phage(gi24371539)          6.02e-73            SalmonellaentericasubspentericaserovarTyphimuriumMESHSLTLDEACAFLKISRPTATNWIRTGRLQATRKDPTKPKSPYLTTRQACIAALQSPLHTVQVSAGDDITEELKCHYSAEVKPGTPVSHCRTAKDLSSLLGQR
18637..19800                       PHAGE_Salmon_ST64T_NC_004348: integrase; GPV46_RS13670; phage(gi24371538)            0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSLFRRGETWYASFTLPNGKRFKQSLGTKDKRQATELHDKLKAEAWRVSKLGETPDMTFEEACVRWLEEKAHKKSLDDDKSRIGFWLQHFAGMQLKDITETKIYSAIQKMTNRRHEENWKLMDEACRKNGKQPPVFKPKPAALATKATHLSFIKALLRAAEREWKMLDKAPIIKVPQPKNKRIRWLEPHEAKRLIDECPEPLKSVVEFALSTGLRRSNIINLEWQQIDMQRKVAWIHPEQSKSNQAIGVALNDTACRVLKKQIGNHHKWVFVYKESSTKPDGTKSPVVRKMRYDANTAWRSALKRAGIEDFRFHDLRHTWASWLVQAGVPISVLQEMGGWESIEMVRRYAHLAPNHLTEHARQIDSIFGTSVPNMSHSKNKEGTNNT
22427..22438                       attR                                                                                 N/A                 TGGCTCCGGTTG
