gi|00000000|ref|PDEF01000001.1|  Micrococcus luteus strain FDAARGOS_406 pRIID_111.contig.0, whole 2440496, gc%: 73.28%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(244093..244374)         PHAGE_Escher_PA28_NC_041935: tail assembly protein; CRM77_01070; phage(gi100053)     5.55e-25            MicrococcusluteusQFTSIRYGERLAEIGATPSIGTVGDSYDNALAETVNGYYKAELVRGPARPGPWRTVEDLELATLGWVSWHNTQRLHGYLGDVPPAEFEDTFYAV
complement(244382..245824)         PROPHAGE_Escher_MG1655: IS30 transposase; CRM77_01075; phage(gi16132105)             8.23e-73            MicrococcusluteusMASKDWARKISDVPEGTRRQWRADRALRAPMRSPGRPQPSREVQRQFWRVIATGVTTVEASLTVGVSWPVGARWFRHAGGMTPLSLAEPTGRYLSFAEREELAILHAQGQGVRQIARTLGRDPGTISRELRRNCATRSGKQEYRATVAQWKAQEAARRPKPAKLATNQRLHDYVQARLNGVVLGPDGVAVPGPVGPGFKGRKMKPRRADRRWSTAWSPEQISHRLRLEFPDDVSMRISHEAIYQSLFVEGRGALKRELVGCLRTGRALREPRARTRNKPQGHVTEDVVFSKRPPEAADRAVPGHWEGDLIIGTERSAIGTLAERKSRATILVHLPRLQGWGEQPPVKNGPSLGGYGAEAMTAALIKAMATVPEQLRQSLTWDRGKELAGHVQFTMATGTKVFFADPHSPWQRPTNENMNGLLRQYFPKGTDLSRWSADDLAAVAYTLNNRPRKVLGWKTPAEVFAEQLSSLETSGVATTT
complement(245886..246829)         PHAGE_Gordon_Cucurbita_NC_031029: hypothetical protein; CRM77_01080; phage(gi100019)     9.46e-22            MicrococcusluteusMPKEQTAGKPTTRRYSPEEKAAAVRMVRTLRAELGTEHGTVNRVATQLGYGVESVRMWVKQADIDDGVTSGVSSAEARRVRELEQEVRELRRANEVLKRAASFFGAELDRHYRKSRSSTRTRMTWSTLAGSESISAGCCRWLRAATTPPRPAPPRLARCGTRSSRSWSSSGRRTTASTGSESSGRPRVAPGSTSAEIRRAGSCAPQGLRARPGRSGRRPGQIRPRRGTRTSSGSSPRLPRTGSGSPTWRSCRRGPASRTSASSSTRSPGSSGGGARHTCAPRWSSTRSRWPAGPAALAMRTCAVTATRGG
complement(246889..247086)         hypothetical protein; CRM77_01085                                                    N/A                 MicrococcusluteusMSEEQWDEAAFRASIPAAREKVEFAARFCEIGPSQPRWDSHRPVVELIFYLCKLDYDIKVLLLPS
complement(247131..247463)         PHAGE_Stx2_c_Stx2a_F451_NC_049924: hypothetical protein; CRM77_01090; phage(gi100031)     6.33e-10            MicrococcusluteusMAMPETDLLRIGRWCRERVPEHLWDQVRVEAEIADRHVTIIETRPPWDGQGDWTRFPVARLRYTVKTGQWSIYWRDRHMKFHEYTKRRPTKNVQSLLDYIGSHQDPIFWG
complement(247526..247705)         hypothetical protein; CRM77_01095                                                    N/A                 MicrococcusluteusMLAEQHDEWTESRRYMSLELLTATDTMLAEAAAKAAAEQAALQVSDTMTDDPGHAALAA
complement(247719..248725)         PROPHAGE_Brucel_1330: ISBm3, transposase, programmed frameshift; CRM77_01100; phage(gi52430457)     1.64e-13            MicrococcusluteusMTHANAPLTPTGRLRMVHRHLHDGIPQAHVAAEFRVSRPTVATWVARYRAQGEAGLQDLPSRPHRSPAQLDPEVVAQIQTLRRREKWSARRIHHHLVSEGHRVCLRTVGRWLHRLGISRLRDLTPAGEDLRQRPQKITARGPGHMVHLDVKKIGRIPEGAAGVLTAGTPRTRERPSAGLADGSGTPICTRRSTGSPAWRTPRRWRTSGRPRPASTAGRGRSSPPTASGSTGSRTTGTTTGPWTSPPRWSRSGAGTTGSAPTPRAITGRSNATTGWSMRSSTPARIPQRQLGVRRWPCGTTTTTIGLIPPAGTPRRPRWPRPESTTSPPTIAG
complement(248826..249929)         PHAGE_Coryne_Poushou_NC_042139: hypothetical protein; CRM77_01105; phage(gi100031)     2.44e-92            MicrococcusluteusMTAPHDIDPQAFLSDLLTQASPDLMRQMLTTFINALLSAEADSVCGAAYGARSDERTNRRNGYRHRDLDTRAGTIDVAIPKLREGTYFPDWLLERRRRAEAALTTVVATCYLLGVSTRRMDKLVQTLGITGLSKSQVSEMSKDLDAPVEAFRTRPLDAGPYRFVAADALVLKVREHGRVVKVAAMVATGINNDGYREILGLQLGTAETREGWLGFFRDLAARGLSGVELITSDAHAGLVEAAGAVFGTAQWQRCRTHYAANLMAVCPKSQWPAVKALLHSVYIQPDVEAVIAQYEHMIDSLATHLPAAAEHLEAARDEVLTFTKFPKEVWKKIWSNNPNERLNKEIRRRTDVVGIFPSRVAVIRCCGA
complement(250041..251384)         PROPHAGE_Escher_CFT073: transposase; CRM77_01110; phage(gi26246249)                  6.73e-109           MicrococcusluteusMIDEKNPGEPSGQDLVEQLKASGQLDALFAQIDAGGVELTGDGGFVPALVKAALERGLQAELTSHLGYEKGSSEALKHANSRNGTTPKTVESEVGPIELDVPRDRGGSFTPRLVPKGQRRLGGLDDMIISLYAGGMTIRDIQHHLASTIGTDLSHETISNITDAVSEEVLAWQSRPLEEFYPVIYLDAIRIKIRENSQVLNRAAYIAVGVDLEGIKHVLGIWVQDTEGSAFWAHVCADLANRGVQDVLIVCCDGLKGLPEAVEATWPDSMVQTCVVHLIRAAMRFVAYQDRKKVAAALKPIYTAPNEETARKALAEFEASELGTKYPSAAATWANSWERFIPFLQFPPMLRKVIYTTNSIESLNFQLRKVTKNRGHFPSTEAAVKLLWLAICNIEDKRAAERARDRGKPAGQRKAQGRLVEGQAVTNWKQALAQLAAAYPDRINPYL
complement(251559..252812)         PHAGE_Coryne_Poushou_NC_042139: hypothetical protein; CRM77_01115; phage(gi100031)     4.74e-98            MicrococcusluteusMTAPHILDPAGLLGEALSEASPDMMRHLLQTMINTLLSADADAVVGAEWGKPSSSRTAQRNGYRHRDLDTRVGTLDVAIPKLRSGTYFPDWLLERRKRAESALITVVADCYLAGVSTRRMDKLVKTLGVNALSKSQVSRMATELDEQVEAFRHRPLGVAGPFTFVAADALSMKVREGGHVVNAVVLLATGVNADGHREVLGLRVATSETGAAWNEFFADLVARGLAGVRLVTSDAHTGLKDAIAANLPGATWQRCRTHYAANLMGITPKNMWPAVKAMLHSVYDQPDAASVHAQFDRLLDYVSEKLPTVAEHLDAARADILAFTTFPKDVWTQVWSNNPAERLNREIRRRTDAVGIFPNRAAIVRLVGAVLAEQTDEWAEGRRYLGLEVLARCRLTTVTNTGDEVDPDTELNLGLSA
253071..253433                     PROPHAGE_Escher_MG1655: IS30 transposase; CRM77_01120; phage(gi16132105)             1.27e-09            MicrococcusluteusMVRRRLTFTERMEISTGSKAGWGVRKIASHLGRCPSVVSRELRPNSTKTRGYQAVTADVKAQRQRSRPQVRKVAKDPVLEARVNADLAASWMPNEIAGRLRLEAADPTVERMANSPDAQGR
complement(253446..254542)         PHAGE_Mycoba_Xavia_NC_051740: endolysin; CRM77_01125; phage(gi100033)                1.93e-59            MicrococcusluteusMTNSRKRHTPEQVVRKLGQADRMLADGQDVAAVCRELGVSEQTYYRWRKQNATLKRLLAEAELEKAALKELAGGKLLSPDRRRAAVDHLKGKLRVSERMACRLVGLSRSAYRRPLKGDTVADPDRALREWLRAWAKDHPRYGYRRAYHDARAEGWVVNHKKIQRLWRDEGLRVPQRRRRKRVGSSTVDAPTADAPNVVWAVDFQFDADEHGRPIKICSIVDEHTRECIGGLVERSITADRLTAHLEDLVAARGAPAVLRSDNGPEFISEAMADWAGTRTGLSYIPPGSPWRNGYVESFNSRIRDECLNINSFYSLLHAQVIIGDWKDEYNHHRRHSSLGYLTPAEYARQCTHQMETDDSQNVRTE

#### region 2 ####
725746..725761                     attL                                                                                 N/A                 ACGACGACGGCCCGTC
734866..735492                     PHAGE_Gordon_Chelms_NC_048768: tail length tape-measure protein; CRM77_03240; phage(gi100057)     2.55e-18            MicrococcusluteusMSETSTPAPESAPLVWIDCEMTGLHPQVDELVEVAVLITDAELNILDEGIDLVIRPSAAALEQMDPFVRDMHTTSGLLPELAEGLELDDAAARVLQYIAARVPAGKGLLAGNTVGQDKLFLARYMPAVVDHLHYRIVDVSTVKELARRWYPRAYYQAPAKTGGHRALGDIKDSITELRYYRAAVMAPAPGPTTEEARAIAEVVSGAQA
735596..735671                     tRNA                                                                                 N/A                 GTGGGCGTAGCTCAGTCGGCAGAGCGTCTGGTTGTGGTCCAGAAGGTCGCGGGTTCAATCCCCGTCGCTCACCCCA
735791..736981                     PHAGE_Mycoba_MooMoo_NC_051721: hypothetical protein; CRM77_03250; phage(gi100042)     1.06e-52            MicrococcusluteusMATIQTRTNKAGRTTYRVGFYEDGRFQWLPALAHEAGAQRIKAIVEDPRQGPTVARRILEAQVDSAPGMPTLAEFFPRYIEHRGLRCTPGTLAGYEAEAARTFLPRLGELPVDMIDRRTVAEWIRWQLQQPTARWRAAAARAAAATPPRPEPPLATVSPKTVRNAHALLSAVLGLAVQEGILPANPARGADLPDDDVEEERGIFSRAEWARFYAAMSEPYQPLLIVLLVTGARWGEATALQVRDLDVAARVIHVRRAWKKGKEGAVLGVPKTARGRRTIMLPDWAVETLEPLTDGRAADEFLLTAPGGGVIHRTNFVERHWKPALAAAGIAKHLTPHSLRHTFASWALMDGVPAQVVQHRLGHESLQTTSRVYAHLLLDAQRAAVDAIGWEPSPGT
complement(737082..737354)         hypothetical protein; CRM77_03255                                                    N/A                 MicrococcusluteusMTTTTQAPACAGHLSVRDHMVLQLWGRRWRHGAARDRAAEHLVGLRGTALAMRVAVLAEDPVAIAAYPVITRRAREARQTRERAVRAPAA
complement(737395..737970)         PHAGE_Gordon_Zirinka_NC_031097: hypothetical protein; CRM77_03260; phage(gi100016)     4.58e-05            MicrococcusluteusMAKTTKYTAEVSEGRDELLDGKTIARLRTIAVKNQRGETVRELKAADNDEDVRAKLRAAGYTLKDWAGGTTPATLERGRNPLVAGCLWPLVAVMALLAWAIFSAFNNASPDEPEEWDAKIACQTLVKEKLRAPSTAKFSRETASGGPKAWTVTGTVEAENALGGTVGHRYSCSVTFTGDDEYRGTATITDR
complement(738052..738459)         PHAGE_Gordon_GMA4_NC_030939: hypothetical protein; CRM77_03265; phage(gi100031)      5.56e-20            MicrococcusluteusMFHPWRSLRALTHVVVVWARPHPSAPAATDGATVIWLDPRMTQAERRCALTHELVHLEHGHRGCQPPAVEHAVRAVAARQLITLEQLSDALPWSMSLDELADELWVTPLVLSDRLAGLTRTEREHLAALATEYSA
738542..738997                     PHAGE_Gordon_Nymphadora_NC_031061: hypothetical protein; CRM77_03270; phage(gi100042)     5.19e-25            MicrococcusluteusMREQVWIMGHGYEGRTIDEYIGDLYAWHADVVVDVRLNAISRKKGFSKTALRAALADAGIRYEHRPELGNPKDNRGGFWEPGTPAHGDALVRFEEMLHGAAAAEAVRDVAEMARTERVVLLCFEASERCCHRQVVLERVRKLTARQLVTSV
complement(738994..739230)         PHAGE_Gordon_Nymphadora_NC_031061: hypothetical protein; CRM77_03275; phage(gi100043)     5.56e-12            MicrococcusluteusMCDEPGCAGHKQSLIDWEAAELVRRWHANDSDAVAAAALRTRFFDEMADSARGPLFFVGNQHQAPRGFTVLGVYRSLG
complement(739443..740696)         PHAGE_Coryne_Poushou_NC_042139: hypothetical protein; CRM77_03280; phage(gi100031)     4.74e-98            MicrococcusluteusMTAPHILDPAGLLGEALSEASPDMMRHLLQTMINTLLSADADAVVGAEWGKPSSSRTAQRNGYRHRDLDTRVGTLDVAIPKLRSGTYFPDWLLERRKRAESALITVVADCYLAGVSTRRMDKLVKTLGVNALSKSQVSRMATELDEQVEAFRHRPLGVAGPFTFVAADALSMKVREGGHVVNAVVLLATGVNADGHREVLGLRVATSETGAAWNEFFADLVARGLAGVRLVTSDAHTGLKDAIAANLPGATWQRCRTHYAANLMGITPKNMWPAVKAMLHSVYDQPDAASVHAQFDRLLDYVSEKLPTVAEHLDAARADILAFTTFPKDVWTQVWSNNPAERLNREIRRRTDAVGIFPNRAAIVRLVGAVLAEQTDEWAEGRRYLGLEVLARCRLTTVTNTGDEVDPDTELNLGLSA
complement(740802..741269)         PHAGE_Gordon_Nymphadora_NC_031061: hypothetical protein; CRM77_03285; phage(gi100043)     6.96e-27            MicrococcusluteusMLPLTGEGRALYEKERGHRSEVARVLITVKAAPQPSEKYGDTVCVAGIRMREGSGPEWIRLYPIPFRSMAELERFKKYDVVDVRVTPAADDYRSESYRPDRGSLVVVDHLPPWKPRHEYVRPLTDQWTMCRILATARAKQAYPSLAVVRPQLSPA
complement(741281..741886)         PHAGE_Mycoba_Demsculpinboyz_NC_051722: minor tail protein; CRM77_03290; phage(gi100055)     1.99e-15            MicrococcusluteusMNDVHSLGRLIASAQERNGWSLRDLAARAEHAGYDMSHTSFARLKSTPVTSIKGENITMLALVLKVPVAHVATAALESMGVELDSALHPSILDVVQESPDLSMYDQELLTAVLRVMLDRRRTDQYDEHDHSDQHQDRERGTAERGGALGGDPGVEHKTAVAGALADFDLAAHPDFELTRDRQAREWGDVGEENLDMGGEGA
complement(742281..742742)         PHAGE_Mycoba_Enkosi_NC_028936: transporter-like protein; CRM77_03295; phage(gi971757643)     1.35e-07            MicrococcusluteusMTSSETSAPAQSRRDWIGLAVLSIGLGLIVLDGTIVGVALPAIIADLHLDLTDGQWVNSLYAVLLAALLLSTGDLADRWGRKRLFLTGLVVFVGGSLLAAAASSGDALIGARAVQAVGAAFIMPSTLSTVNAVFRGRHRAVAFGVWGPVISGAS
747038..747053                     attR                                                                                 N/A                 ACGACGACGGCCCGTC

#### region 3 ####
complement(1981803..1983056)       PHAGE_Paenib_Vegas_NC_028767: transposase; CRM77_09140; phage(gi971741608)           1.00e-73            MicrococcusluteusMTAPHILDPAGLLGEALSEASPDMMRHLLQTMINTLLSADADAVVGAEWGKPSSSRTAQRNGYRHRDLDTRVGTLDVAIPKLRSGTYFPDWLLERRKRAESALITVVADCYLAGVSTRRMDKLVKTLGVNALSKSQVSRMATELDEQVEAFRHRPLGVAGPFTFVAADALSMKVREGGHVVNAVVLLATGVNADGHREVLGLRVATSETGAAWNEFFADLVARGLAGVRLVTSDAHTGLKDAIAANLPGATWQRCRTHYAANLMGITPKNMWPAVKAMLHSVYDQPDAASVHAQFDRLLDYVSEKLPTVAEHLDAARADILAFTTFPKDVWTQVWSNNPAERLNREIRRRTDAVGIFPNRAAIVRLVGAVLAEQTDEWAEGRRYLGLEVLARCRLTTVTNTGDEVDPDTELNLGLSA
1983582..1984591                   PROPHAGE_Brucel_1330: ISBm3, transposase, programmed frameshift; CRM77_09145; phage(gi52430457)     3.90e-16            MicrococcusluteusMTHANAPLTPTGRLRMVHRHLHDGIPQAHVAAEFRVSRPTVATWVARYRAEGEAGLLDRPSRPRRSPAQLDPEVVAQIQTLRRREKWSARRIHHHLASEGHRVCLRTVGRWLHRLGISRLRDLTPAGEDLRRQPAQRITARGPGHMVHLDVKKIGRIPEGAAGVLTAGTPRTREQPSAGLADGSATPTCTRRSTGTPAWRTPRRWRTRRRPRPASTAGRGRSSPRTASPWTGWSRTTGTTTGPWTSPPRWSRSGAGTTGSGPTRPAITGRSNATTVWSMRSSTPARTPQRRPGVRRWQCGTTTTTIGLIPPAGTPLRPRWPRPESTTSPLTAAG
complement(1984729..1984941)       hypothetical protein; CRM77_09150                                                    N/A                 MicrococcusluteusMQRPGTCDKSLRKEDDIKVIYPIYTHLQIQNILLLANDRQSVIEFLINASRLWEKKICGQGGRQLTYLSS
1985203..1985730                   PHAGE_Haloar_4_NC_047943: hypothetical protein; CRM77_09155; phage(gi100006)         5.98e-14            MicrococcusluteusMAGLEQLEAEGLPDLSEVDGAPEVRHRVEKQYRLVAQRGAAARSFAKKVLLAYNGVCAICGEYLAGGPGVPSGIEAAHILPWSKFDLDEVRNGLALCKQHHWAFDSGLLSVLFDFDEELYVVAVGPMFSDNLDTRIQEWVLRWVGEIPRSHLPVRSVDYPDPVLLLKLEEIRRGW
complement(1985774..1986721)       PHAGE_Clostr_CDKM15_NC_048643: head morphogenesis protein; CRM77_09160; phage(gi100068)     2.42e-36            MicrococcusluteusMPKGEQLMLDTSLRMASFFTGIGGFDLGFENAGIRTVYQCEIKEFCNQVLEYHWPEMPRGTNIELVNPEDIPEADIWTGGFPCQDISLARMSSERKGLRGSQSRLFFEFERLLEQGRPKVVLLENVAGLLSSNEGRDLATVIRSLADLGYGVGWRVLDSRHFGVPQSRTRVFICGVYGNPEAAASILFEPECGDRNSEKSRSNGPKPISPFKISVGDPERGYAKQLAHCVYAEGPRHTGTDWSRNYVSYPEEGQVRRLTPLESERLQGFPDNWTNVPLAGSTEAVDSARYHACGNAVTVNVAEWLARRISTALGH
1986936..1987946                   PROPHAGE_Brucel_1330: ISBm3, transposase, programmed frameshift; CRM77_09165; phage(gi52430457)     3.42e-51            MicrococcusluteusMTHANAPLTPTGRLRMVHRHLHDGIPQAHVAAEFRVSRPTVATWVARYRAEGEAGLLDRPSRPRRSPAQLDPEVVAQIQTLRRREKWSARRIHHHLASEGHRVCLRTVGRWLHRLGISRLRDLTPAGEDLRRQPAQRITARGPGHMVHLDVKKIGRIPEGGGWRAHGRDSENARAAKRGPGRRVGYTYLHSAIDGYTRLAYTEALEDEKAATTVSFYCRARAFFAAHGITVDRVVTDNGNNYRAVDFTAKVVSLGGRHHRIRPYTPRHNGKVERYNRLMVDEVLYARPYSSETARREALAVWVNHYNYHRPHTSCGDAPPASLAPARVNNVMTSYI
complement(1988179..1988412)       hypothetical protein; CRM77_09170                                                    N/A                 MicrococcusluteusMGEPLQLPSASYLLRGRPSGLVGPGPSQQRHDLLHLEGCDVHTTTILGSVDEGIFRSLGMLVTSEPKFQKKGLYRKR
complement(1988304..1989313)       PROPHAGE_Brucel_1330: ISBm3, transposase, programmed frameshift; CRM77_09175; phage(gi52430457)     1.92e-30            MicrococcusluteusMTHANAPLTPTGRLRMVHRHLHDGIPQAHVAAEFRVSRPTVATWVARYRAEGEAGLLDRPSRPRRSPAQLDPEVVAQIQTLRRREKWSARRIHHHLVSEGHRVCLRTVGRWLHRLGISRLRDLTPAGEDLRRQPAQRITARGPGHMVHLDVKKIGRIPEGGGWRAHGRDSENARAAKRGPGRRVGYTYLHSAIDGFTRLAYTEALEDERAATTVSFYCRARAFFAAHGITVDRVVTDNGNNYRAVDFTAKVVSLGAGTTGSGPTRPAITGRSNATTVWSMRSSTPARTPQRRPGVRRWQCGTTTTTIGLIPPAGTPLRPRWPRPESTTSPLTPAG
