gi|00000000|ref|PQNS00000000.1|  Corynebacterium bovis strain 16-1683 - LARGE, whole genome shotgun 2454259, gc%: 72.04%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(1710511..1711192)       PHAGE_Propio_Kubed_NC_027625: putative collagen-like minor tail protein; CXF34_07610; phage(gi906475983)     1.90e-06            CorynebacteriumbovisMTDDFTGHGKDDLESVLAADRLLDDLARGGSGDDDDRLSGLLASAAREARAEIPAPPTLGDLFATDGDDYGADGVDGLDGLDGADGDVVPFTAAATEQFPSTTGVDGADGADGVDGPDGVDSADGVDGADGDVVPFAATGRGRRGPRSVRRVLARRVAASGVSATALFVAGGAAAAIAFGGLGYAAYTGSIPVPGIPSVKDDDGTASSSSTSAGTSAPGAATGQAGA
complement(1711282..1711917)       PHAGE_Bacill_Blastoid_NC_022773: RNA polymerase sigma-70 factor; CXF34_07615; phage(gi568192089)     4.91e-11            CorynebacteriumbovisMTTTEDLDAALARLVPDAVAGDTAVVQRIINLIHAPVVRYCRARVPQWRYPTAEDIAQEVCLAVARALPGYADRGLPFMAFVYRVAANKIVDALRSQSRDQAVPTEDVPDTEVTENTPESSAIVRDACNEIAGLLDILSDKARDIIILRVFEGYSAEETARILGTSAGAVRVAQFRALAKLREQLAAQDSPGGAAPGDHGHRAGDRREARP
1712351..1712653                   PHAGE_Mycoba_Florinda_NC_028889: WhiB; CXF34_07620; phage(gi971752781)               1.81e-11            CorynebacteriumbovisMPQPRQLPGPTATMWDWQLHGSCRGVDSSVFFHPDGERGRAREMREHRAKAICRECPVLVRCREHALSVGETYGVWGGMSEAERDSILHPASRNRRRMAS
complement(1712754..1714367)       PHAGE_Cellul_phi14:2_NC_021806: chaperonin GroEL; CXF34_07625; phage(gi526178751)     5.88e-93            CorynebacteriumbovisMSKLIAFDQEAREGLQKGVDTLADAVRVTLGPRGRNVVLQKAFGGPTVTNDGVTIARDIELEDPFENLGAQLVKSVAIKTNDIAGDGTTTATLLAQALIAEGLRNVAAGANPIALNAGIAAGAEKTVELLRERAKPVADSAAIANVATVSSRDAQVGRMVADAMEKVGRDGVVTVEESQSLEDEQTVTEGVSFDKGYLSPYFVTDADSGTAVLDGAVVLLVREKISSLPEFLPVLEKIAEAGKPVLIVAEDVEGEPLQMLVVNAIRKSVKVVAVKSPYFGDRRKAFMDDLAVVTGGTVIDKELGHSLAETTLDQLGSARRVTVSKDETVIVDGGGSAEAVESRRQQIRNDIERTDSSWDKEKFEERLAKLSGGVAVIRAGGATETEVNERKLRIEDAINAARAASQEGVIAGGGSVLVQIATELDELSASYEGDEAIGIRSLAKALRRPAYWIADNAGLDGAVVVNAIADRPNGEGFNAATLEYGDLVAEGIIDPVKVTHSAVVNATSVARMVLTTETAVVDKPQKAAPAAGGHHHH
complement(1714386..1714685)       PHAGE_Bacill_0305phi8_36_NC_009760: GroES; CXF34_07630; phage(gi156564025)           2.94e-17            CorynebacteriumbovisMANVNIKPLEDRVLVQIVEAETTTASGLVIPDSAKEKPQEATVIAVGPGRVGDDNDRIPMEVKEGDTVVFSKYGGTELKYSGEEYLILSQRDILAVIEK
complement(1714827..1715327)       hypothetical protein; CXF34_07635                                                    N/A                 CorynebacteriumbovisMARSLLVTPDLTAEEVDVDLSQATDLLGAPADGRLSVAFVEDGRSVACVYASSHSDPAAAGADGTAGTTGTAAGDGDAASPDVASEPNPLASMGRNEQDTGNSAFLSDPTRAICGTVLFTGADGGDLTDEDVETVRRGIRAVENYREDQPEEYRLWRDAVLNLRSR
complement(1715544..1716297)       PROPHAGE_Escher_MG1655: glycation-binding protein, predicted protease/chaperone; essential for genome maintenance; CXF34_07640; phage(gi16130960)     1.40e-41            CorynebacteriumbovisAPAGGDAARGAEGTPDGGDAARGAEGTPDGGDTLGHAVALLVSGGHTQILEVDGIGRPMRELGGTLDDAAGEAYDKVARLLGLGYPGGPVIDRLAATGDPAAVAFPRGLTRPGDAPYDFSFSGLKTAVARYVEQAERDGRTIAVADLCASFQEAVVDVLTAKAVRACVDTGATTLLLGGGVSANRRLRELARQRCDAAGVALRVPPLRLCTDNGVMTATLAAELIAAGEGPSGLGVGSDPSLDVAVPLVR

#### region 2 ####
2025116..2026112                   PROPHAGE_Escher_Sakai: putative ATP-dependent protease; CXF34_09085; phage(gi15833954)     1.14e-20            CorynebacteriumbovisARGGDPVAVDVIAQPEARRAVELAAAGGHHLMLTGPPGSGKSMLAERLPGILPPMDRREQLEAAAVHSVAGASGDLDRLWAGVRPFIAPHHTVSPAALLGGGVGPGPAGGGEPRPPRGAVSRRGRRGLRSHPRLPAHTDGTWRRRPRPEPADRPLPGAVPAHHGGEPVPVRRGVTGRLHVHGRRPAPVLDGRVRTAARPGGHLRHHARGGRRDPHPGGGVLRGVDTGREGAGDRGPGAGPAPVVRCGGLAGQRLRARSGPAPGLPRRRGRHARPAGHAAPGGAQSTRRGPCAAGGVDDRGRRRGGPAGCRPGARRRGAVRRRGGRTPRGAVA
2026093..2027412                   PHAGE_Thermu_OH2_NC_021784: SMF family protein; CXF34_09090; phage(gi526118339)      1.20e-17            CorynebacteriumbovisMTTGGGDTSAGGRRLLAWVTLRRVVEASHAEVVAALWPDGDRGAPARVEELVEAMRRGDARLPPSLRTRMWGPGTVDPVADLRAAEAEGYRLVTPDDPAWPACFRGGFPDLRRPRNRAGDAGDTGDVSDSGVAASHPGPAPAGAPDPATGSDGAGVRGQVADPFALWTAGDGDLAGATRRTVTLVGTRAPSRYGTEAAEMLGSTLAAAGYTVVSGGALGIDRAAHAAALRAGGTTVAVAACGPGVTYPSANRPLFRDIRRAGLVMTEYPPGTRPARHRFLTRNRLVAALGQGTVVVEAPYRSGALNTCNWAELLVRPVMAVPGPVTSSGFTGCHERIRSGRAALVTRAEDVRELIEPLGSVDSSRQLELDFHATGSQTLTLDELKVFDAAGVPGDVSGRMDDLVGGSGLPLAVVVRVIRDLEARGLVVRDGDRWVKATR
2027562..2028482                   PHAGE_Brevib_Jenst_NC_028805: putative recombinase XerD; CXF34_09095; phage(gi971744895)     1.36e-29            CorynebacteriumbovisMGHMASPPDLDKAVDMYMDHLRLVLGRSENTVRAYSADLRAACEGLDGVEGFTLDHCRDVLDWAVEAGHSATSVARMVSSLRGFGGYLARQGWVGTNPAAPLRAPKTDRHLPRVLKADGAREMLDAAAQAAGETDDPVPTRDWAMLELLYATGVRVSELVGVDLDDVDTGERTVRVTGKGGKTRVVPFGPSTATALRAWIDARPRLSGPSSGPALFLGVRGGRIDPRQVRTVVRTATAAAGGPTLSPHGIRHSTATAVLEGGADLRIVQELLGHSSMATTQIYTHVGTERLKAVYRQAHPRSGATD
complement(2028588..2029006)       PHAGE_Clostr_phi3626_NC_003524: Gp15 protein; CXF34_09100; phage(gi20065978)         3.18e-06            CorynebacteriumbovisRRPVPGAVVRAVDIPDRPWEQGHRGVDLAAAPGDPVRASAAGTVVFAGSVAGTPVVSVDHGGGLRTTYEPVVADVRRGDVVTRGAVIGRLADAAALPPTARRGPGLSWGARIRDPASPDGRYIDPMSLLGRPTVRLWA
2029527..2029607                   peptide-binding protein; CXF34_09105                                                 N/A                 CorynebacteriumbovisGPRGPPPPRRRGGGRGPRPGGGGGRGG
2029834..2030034                   hypothetical protein; CXF34_09110                                                    N/A                 CorynebacteriumbovisMANVEKKYYVDPGWPKDLAPGEHAVTEIVADTAGALSPYGDIEFPVPVESLPYVHPYTRTNPVFGR
complement(2030091..2030777)       PHAGE_Mycoba_Barnyard_NC_004689: gp33; CXF34_09115; phage(gi29567008)                2.49e-21            CorynebacteriumbovisMGRHSTRSSSFSTSARLAVAGLAVGSLGALVAPAAHAAPDSDWDRLAQCESGGDWAINTGNGFQGGLQFSPSTWSAHGGGEFAATANQASREQQIAVAERVLASQGWGAWPACSASLGLNSGPTDRSAAPAPAPAPAPAPEQNPAETIVNAHSVPQVDALHDTLVAAAQAAGVEIPQPLEELYHRYRDALESGYAATVEQVRAAADQASVQAEAFRDSLPAPVRDALR
2030961..2031344                   PHAGE_Lactoc_bIL312_NC_002671: Csp; CXF34_09120; phage(gi13095918)                   2.12e-13            CorynebacteriumbovisMPTGKVKWYDADRGFGFVSNPGDEDVYVGSQVLPDGVTELVPGQRLEYDVATGRRGPQALRVTVLDDGPRRAQHRYRPDQLHSMVQDTITILENQIQPGLQKGRRPNRGEGHRVAEILRTIARELDS
