gi|00000000|ref|RXLZ00000000.1|  Stenotrophomonas maltophilia strain MDMC339, whole genome shotgun 4788525, gc%: 66.14%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
1102276..1102301                   attL                                                                                 N/A                 TCCATCATCGGGGCAACGGACAGGCG
1102454..1103515                   PHAGE_Entero_mEp460_NC_019716: integrase; EKL94_05105; phage(gi428782338)            4.85e-70            [Stenotrophomonasmaltophilia]
1103534..1104181                   hypothetical protein; EKL94_05110                                                    N/A                 [Stenotrophomonasmaltophilia]
complement(1104318..1104782)       hypothetical protein; EKL94_05115                                                    N/A                 [Stenotrophomonasmaltophilia]
1105332..1106009                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; EKL94_05120; phage(gi100120)     1.50e-20            [Stenotrophomonasmaltophilia]
1106377..1107555                   ATP-binding protein; EKL94_05125                                                     N/A                 [Stenotrophomonasmaltophilia]
complement(1107615..1108325)       PHAGE_Stenot_Smp131_NC_023588: site-specific DNA-methyltransferase; EKL94_05130; phage(gi589891992)     2.38e-161           [Stenotrophomonasmaltophilia]
complement(1108243..1108500)       PHAGE_Stenot_Smp131_NC_023588: hypothetical protein; EKL94_05135; phage(gi589891993)     1.43e-50            [Stenotrophomonasmaltophilia]
complement(1108497..1109510)       PHAGE_Stenot_Smp131_NC_023588: phage portal vertex protein; EKL94_05140; phage(gi589891994)     0.0                 [Stenotrophomonasmaltophilia]
1109509..1109814                   PHAGE_Stenot_Smp131_NC_023588: baseplate assembly protein; EKL94_05145; phage(gi589892008)     8.69e-30            [Stenotrophomonasmaltophilia]
1109819..1111027                   PHAGE_Stenot_Smp131_NC_023588: putative phage tail fiber protein; EKL94_05150; phage(gi589892009)     1.66e-61            [Stenotrophomonasmaltophilia]
1111040..1111351                   PHAGE_Stenot_Smp131_NC_023588: tail protein; EKL94_05155; phage(gi589892015)         8.83e-51            [Stenotrophomonasmaltophilia]
1111360..1111476                   PHAGE_Stenot_Smp131_NC_023588: tail protein; EKL94_05160; phage(gi589892016)         2.08e-18            [Stenotrophomonasmaltophilia]
1111649..1114513                   PHAGE_Stenot_Smp131_NC_023588: phage tail tape measure protein; EKL94_05165; phage(gi589892018)     0.0                 [Stenotrophomonasmaltophilia]
1114525..1114926                   PHAGE_Stenot_Smp131_NC_023588: phage tail protein; EKL94_05170; phage(gi589892019)     1.46e-71            [Stenotrophomonasmaltophilia]
1114923..1115927                   PHAGE_Stenot_Smp131_NC_023588: phage late gene control protein; EKL94_05175; phage(gi589892020)     7.18e-142           [Stenotrophomonasmaltophilia]
complement(1115941..1117329)       hypothetical protein; EKL94_05180                                                    N/A                 [Stenotrophomonasmaltophilia]
complement(1117529..1118920)       hypothetical protein; EKL94_05185                                                    N/A                 [Stenotrophomonasmaltophilia]
complement(1119408..1119779)       PHAGE_Burkho_KS5_NC_015265: gp11; EKL94_05190; phage(gi327198009)                    5.65e-15            [Stenotrophomonasmaltophilia]
1119910..1120242                   PHAGE_Pseudo_vB_PaeS_PM105_NC_028667: hypothetical protein; EKL94_05195; phage(gi966198698)     3.74e-08            [Stenotrophomonasmaltophilia]
1120239..1120583                   PHAGE_Stenot_Smp131_NC_023588: putative bacteriophage transcriptional activator; EKL94_05200; phage(gi589892022)     4.70e-77            [Stenotrophomonasmaltophilia]
1120652..1120858                   PHAGE_Stenot_Smp131_NC_023588: hypothetical protein; EKL94_05205; phage(gi589892023)     2.47e-33            [Stenotrophomonasmaltophilia]
1121179..1121421                   PHAGE_Stenot_Smp131_NC_023588: hypothetical protein; EKL94_05210; phage(gi589892024)     2.91e-35            [Stenotrophomonasmaltophilia]
1121421..1121729                   PHAGE_Stenot_Smp131_NC_023588: hypothetical protein; EKL94_05215; phage(gi589892025)     1.35e-37            [Stenotrophomonasmaltophilia]
1121729..1121974                   PHAGE_Stenot_Smp131_NC_023588: hypothetical protein; EKL94_05220; phage(gi589892026)     3.41e-42            [Stenotrophomonasmaltophilia]
1122085..1124775                   PHAGE_Stenot_Smp131_NC_023588: DNA primase-like protein; EKL94_05225; phage(gi589892027)     0.0                 [Stenotrophomonasmaltophilia]
1124861..1125286                   PHAGE_Stenot_Smp131_NC_023588: hypothetical protein; EKL94_05230; phage(gi589892028)     6.80e-81            [Stenotrophomonasmaltophilia]
1126470..1126495                   attR                                                                                 N/A                 TCCATCATCGGGGCAACGGACAGGCG

#### region 2 ####
complement(1836448..1837209)       PHAGE_Pseudo_B3_NC_006548: Dam modification methylase; EKL94_08480; phage(gi56692617)     6.35e-96            [Stenotrophomonasmaltophilia]
complement(1837354..1839033)       PHAGE_Escher_Pollock_NC_027381: tail spike protein; EKL94_08485; phage(gi849254844)     6.80e-34            [Stenotrophomonasmaltophilia]
complement(1839039..1841297)       PHAGE_Pseudo_JBD18_NC_027986: hypothetical protein; EKL94_08490; phage(gi100049)     1.12e-157           [Stenotrophomonasmaltophilia]
complement(1841290..1841517)       PHAGE_Pseudo_M6_NC_007809: hypothetical protein ORF037; EKL94_08495; phage(gi149408266)     1.86e-10            [Stenotrophomonasmaltophilia]
complement(1841517..1841747)       PHAGE_Pseudo_NP1_NC_031058: hypothetical protein; EKL94_08500; phage(gi100025)       2.36e-20            [Stenotrophomonasmaltophilia]
complement(1841759..1842541)       PHAGE_Salmon_BP12C_NC_031228: hypothetical protein; EKL94_08505; phage(gi100049)     2.41e-44            [Stenotrophomonasmaltophilia]
complement(1842538..1844238)       PHAGE_Pseudo_JBD25_NC_027992: hypothetical protein; EKL94_08510; phage(gi100049)     1.74e-124           [Stenotrophomonasmaltophilia]
complement(1844238..1845212)       PHAGE_Pseudo_JBD93_NC_030918: hypothetical protein; EKL94_08515; phage(gi100047)     9.34e-11            [Stenotrophomonasmaltophilia]
complement(1845216..1846190)       PHAGE_Pseudo_JBD18_NC_027986: hypothetical protein; EKL94_08520; phage(gi100044)     5.07e-34            [Stenotrophomonasmaltophilia]
complement(1846193..1849696)       PHAGE_Pseudo_JBD18_NC_027986: hypothetical protein; EKL94_08525; phage(gi100043)     1.24e-49            [Stenotrophomonasmaltophilia]
complement(1849881..1850390)       PHAGE_Pseudo_JBD18_NC_027986: hypothetical protein; EKL94_08530; phage(gi100041)     1.22e-17            [Stenotrophomonasmaltophilia]
complement(1850390..1851145)       PHAGE_Pseudo_JBD25_NC_027992: hypothetical protein; EKL94_08535; phage(gi100043)     1.48e-24            [Stenotrophomonasmaltophilia]
complement(1851149..1851361)       hypothetical protein; EKL94_08540                                                    N/A                 [Stenotrophomonasmaltophilia]
complement(1851358..1851834)       PHAGE_Pseudo_JBD18_NC_027986: hypothetical protein; EKL94_08545; phage(gi100038)     7.54e-41            [Stenotrophomonasmaltophilia]
complement(1851831..1852364)       PHAGE_Pseudo_JBD25_NC_027992: hypothetical protein; EKL94_08550; phage(gi100040)     5.16e-39            [Stenotrophomonasmaltophilia]
complement(1852374..1852865)       hypothetical protein; EKL94_08555                                                    N/A                 [Stenotrophomonasmaltophilia]
complement(1853028..1853984)       PHAGE_Rhodob_RcapMu_NC_016165: major capsid protein; EKL94_08560; phage(gi356870880)     4.02e-83            [Stenotrophomonasmaltophilia]
complement(1854041..1854394)       PHAGE_Burkho_BcepMu_NC_005882: gp35; EKL94_08565; phage(gi48696945)                  9.35e-11            [Stenotrophomonasmaltophilia]
complement(1854448..1855653)       PHAGE_Pseudo_JBD18_NC_027986: hypothetical protein; EKL94_08570; phage(gi100033)     1.96e-103           [Stenotrophomonasmaltophilia]
complement(1855870..1855975)       PHAGE_Pseudo_JBD25_NC_027992: hypothetical protein; EKL94_08575; phage(gi100035)     1.21e-05            [Stenotrophomonasmaltophilia]
1855976..1856081                   PROPHAGE_Ralsto_GMI1000: isrso11-transposase orfb protein; EKL94_08580; phage(gi17546155)     1.93e-07            [Stenotrophomonasmaltophilia]
1856119..1856238                   16S rRNA (guanine(966)-N(2))-methyltransferase RsmD; EKL94_08585                     N/A                 [Stenotrophomonasmaltophilia]
1856273..1857922                   M28 family peptidase; EKL94_08590                                                    N/A                 [Stenotrophomonasmaltophilia]
1858135..1859394                   PHAGE_Entero_YYZ_2008_NC_011356: putative 2-component sensor protein YehU; EKL94_08595; phage(gi209427798)     6.28e-29            [Stenotrophomonasmaltophilia]

#### region 3 ####
complement(2808577..2809146)       PHAGE_Pseudo_vB_PaeS_PM105_NC_028667: putative virion morphogenesis protein; EKL94_13055; phage(gi966198713)     7.94e-24            [Stenotrophomonasmaltophilia]
complement(2809146..2810423)       PHAGE_Pseudo_vB_PaeS_PM105_NC_028667: putative head morphogenesis protein; EKL94_13060; phage(gi966198712)     6.00e-82            [Stenotrophomonasmaltophilia]
complement(2810427..2811953)       PHAGE_Pseudo_vB_PaeS_PM105_NC_028667: putative portal protein; EKL94_13065; phage(gi966198711)     0.0                 [Stenotrophomonasmaltophilia]
complement(2811950..2813686)       PHAGE_Pseudo_vB_PaeS_PM105_NC_028667: putative terminase, large subunit; EKL94_13070; phage(gi966198710)     3.99e-83            [Stenotrophomonasmaltophilia]
complement(2813687..2814244)       PHAGE_Pseudo_vB_PaeS_PM105_NC_028667: putative terminase, small subunit; EKL94_13075; phage(gi966198709)     2.02e-22            [Stenotrophomonasmaltophilia]
complement(2814249..2814509)       PHAGE_Pseudo_vB_PaeS_PM105_NC_028667: hypothetical protein; EKL94_13080; phage(gi966198708)     6.65e-29            [Stenotrophomonasmaltophilia]
complement(2814569..2814886)       PHAGE_Pseudo_vB_PaeS_PM105_NC_028667: putative lipoprotein protein; EKL94_13085; phage(gi966198707)     2.26e-13            [Stenotrophomonasmaltophilia]
complement(2814883..2815389)       hypothetical protein; EKL94_13090                                                    N/A                 [Stenotrophomonasmaltophilia]
complement(2815389..2815907)       PHAGE_Xylell_Xfas53_NC_013599: SAR endolysin; EKL94_13095; phage(gi273810445)        3.92e-32            [Stenotrophomonasmaltophilia]
complement(2816252..2816554)       PHAGE_Pseudo_JBD25_NC_027992: hypothetical protein; EKL94_13100; phage(gi100022)     4.10e-22            [Stenotrophomonasmaltophilia]
complement(2816589..2817023)       PHAGE_Clostr_phiCD211_NC_029048: putative HTH-type transcriptional regulator ImmR; EKL94_13105; phage(gi981221022)     1.16e-07            [Stenotrophomonasmaltophilia]
2817086..2817295                   hypothetical protein; EKL94_13110                                                    N/A                 [Stenotrophomonasmaltophilia]
2817292..2817525                   hypothetical protein; EKL94_13115                                                    N/A                 [Stenotrophomonasmaltophilia]
2817522..2817815                   PHAGE_Pseudo_vB_PaeS_PM105_NC_028667: Transcriptional regulator, IclR family; EKL94_13120; phage(gi966198693)     2.85e-06            [Stenotrophomonasmaltophilia]
2817815..2818747                   PHAGE_Pseudo_vB_PaeS_PM105_NC_028667: hypothetical protein; EKL94_13125; phage(gi966198692)     3.23e-23            [Stenotrophomonasmaltophilia]
2818698..2820551                   PHAGE_Pseudo_vB_PaeS_PM105_NC_028667: putative transposase A subunit; EKL94_13130; phage(gi966198691)     3.59e-139           [Stenotrophomonasmaltophilia]
2820706..2821881                   PHAGE_Pseudo_vB_PaeS_PM105_NC_028667: putative transposase B subunit; EKL94_13135; phage(gi966198690)     4.83e-111           [Stenotrophomonasmaltophilia]
2821883..2822119                   hypothetical protein; EKL94_13140                                                    N/A                 [Stenotrophomonasmaltophilia]
2822112..2822351                   hypothetical protein; EKL94_13145                                                    N/A                 [Stenotrophomonasmaltophilia]
2822351..2822659                   hypothetical protein; EKL94_13150                                                    N/A                 [Stenotrophomonasmaltophilia]
2822661..2823050                   hypothetical protein; EKL94_13155                                                    N/A                 [Stenotrophomonasmaltophilia]
2823040..2823315                   hypothetical protein; EKL94_13160                                                    N/A                 [Stenotrophomonasmaltophilia]
2823308..2823535                   hypothetical protein; EKL94_13165                                                    N/A                 [Stenotrophomonasmaltophilia]
2823532..2824011                   hypothetical protein; EKL94_13170                                                    N/A                 [Stenotrophomonasmaltophilia]
2824011..2824265                   hypothetical protein; EKL94_13175                                                    N/A                 [Stenotrophomonasmaltophilia]
2824262..2824873                   PHAGE_Pseudo_vB_PaeS_PM105_NC_028667: hypothetical protein; EKL94_13180; phage(gi966198685)     2.42e-83            [Stenotrophomonasmaltophilia]
2824875..2825393                   hypothetical protein; EKL94_13185                                                    N/A                 [Stenotrophomonasmaltophilia]
2825390..2825707                   PHAGE_Pseudo_JBD93_NC_030918: hypothetical protein; EKL94_13190; phage(gi100013)     8.42e-18            [Stenotrophomonasmaltophilia]
2825694..2826599                   PHAGE_Entero_P1_NC_005856: HrdC; EKL94_13195; phage(gi46401690)                      1.52e-48            [Stenotrophomonasmaltophilia]
2826608..2826976                   PHAGE_Entero_933W_NC_000924: putative single-stranded DNA binding protein; EKL94_13200; phage(gi9632484)     7.41e-11            [Stenotrophomonasmaltophilia]
2826969..2827448                   hypothetical protein; EKL94_13205                                                    N/A                 [Stenotrophomonasmaltophilia]
2827566..2828075                   PHAGE_Ralsto_RS138_NC_029107: hypothetical protein; EKL94_13210; phage(gi985760930)     4.31e-21            [Stenotrophomonasmaltophilia]
2827985..2828422                   PHAGE_Pseudo_JBD25_NC_027992: hypothetical protein; EKL94_13215; phage(gi100001)     1.08e-12            [Stenotrophomonasmaltophilia]
complement(2828591..2829373)       polyphosphate kinase 2; EKL94_13220                                                  N/A                 [Stenotrophomonasmaltophilia]
complement(2829420..2831126)       tetratricopeptide repeat protein; EKL94_13225                                        N/A                 [Stenotrophomonasmaltophilia]
complement(2831132..2832214)       PHAGE_Pseudo_phiPsa374_NC_023601: hypothetical protein; EKL94_13230; phage(gi589287220)     8.05e-13            [Stenotrophomonasmaltophilia]

#### region 4 ####
3079315..3081168                   PHAGE_Synech_S_CBS3_NC_015465: group 2 RNA polymerase sigma factor; EKL94_14325; phage(gi331028036)     2.74e-35            [Stenotrophomonasmaltophilia]
3081416..3082816                   type II toxin-antitoxin system HipA family toxinoxin YjjJ; EKL94_14330               N/A                 [Stenotrophomonasmaltophilia]
3082832..3083074                   hypothetical protein; EKL94_14335                                                    N/A                 [Stenotrophomonasmaltophilia]
3083119..3083194                   tRNA                                                                                 N/A                 GGGCCTATAGCTCAACGGTTAGAGCAGGGGACTCATAATCCCTTGGTTCCAGGTTCGAATCCTGGTGGGCCCACCA
3083150..3083181                   attL                                                                                 N/A                 CTCATAATCCCTTGGTTCCAGGTTCGAATCCT
complement(3083264..3083863)       PHAGE_Stenot_Smp131_NC_023588: phage integrase; EKL94_14345; phage(gi589892030)      2.42e-55            [Stenotrophomonasmaltophilia]
3083955..3084611                   PHAGE_Stenot_Smp131_NC_023588: phage late gene control protein; EKL94_14350; phage(gi589892020)     1.04e-109           [Stenotrophomonasmaltophilia]
complement(3084608..3086002)       hypothetical protein; EKL94_14355                                                    N/A                 [Stenotrophomonasmaltophilia]
complement(3086363..3086725)       PHAGE_Stenot_Smp131_NC_023588: phage late gene control protein; EKL94_14360; phage(gi589892020)     3.49e-50            [Stenotrophomonasmaltophilia]
complement(3086722..3087120)       PHAGE_Stenot_Smp131_NC_023588: phage tail protein; EKL94_14365; phage(gi589892019)     1.74e-77            [Stenotrophomonasmaltophilia]
complement(3087132..3087467)       PHAGE_Stenot_Smp131_NC_023588: phage tail tape measure protein; EKL94_14370; phage(gi589892018)     3.67e-14            [Stenotrophomonasmaltophilia]
3087516..3088361                   PHAGE_Stenot_Smp131_NC_023588: phage terminase ATPase subunit; EKL94_14375; phage(gi589891995)     1.06e-172           [Stenotrophomonasmaltophilia]
3088361..3089371                   PHAGE_Stenot_Smp131_NC_023588: phage portal vertex protein; EKL94_14380; phage(gi589891994)     0.0                 [Stenotrophomonasmaltophilia]
3092220..3092251                   attR                                                                                 N/A                 CTCATAATCCCTTGGTTCCAGGTTCGAATCCT
