Submission Results

Sequence Name: Not Available

GenBank Accession Number: UFYK01000001.1

GenInfo (GI) Number: 0000000000

Download Results: UFYK01000001.1.PHASTER.zip

gi|00000000|ref|UFYK01000001.1| Edwardsiella tarda strain NCTC10397 genome assembly, contig: 3640975, gc%: 57.28%

Download summary as .txt file: summary.txt file_download

Total: 3 prophage regions have been identified, of which 3 regions are intact, 0 regions are incomplete, and 0 regions are questionable.

RegionRegion LengthCompletenessScore# Total ProteinsRegion PositionMost Common PhageGC %Details
135.1Kbintact1504342877-78045 info_outlinePHAGE_Entero_P88_NC_026014(22)53.32%Show info_outline
253.6Kbintact150511653872-1707529 info_outlinePHAGE_Entero_mEp460_NC_019716(18)52.16%Show info_outline
359.1Kbintact150622653809-2712991 info_outlinePHAGE_Entero_mEp235_NC_019708(7)49.84%Show info_outline
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Region: The number assigned to the region.
Region Length: The length of the sequence of that region (in bp).
Completeness: A prediction of whether the region contains a intact or incomplete prophage based on the above criteria.
Score: The score of the region based on the above criteria.
# Total Proteins: The number of ORFs present in the region.
Region Position: The start and end positions of the region on the bacterial chromosome.
Most Common Phage: The phage(s) with the highest number of proteins most similar to those in the region.
GC %: The percentage of GC nucleotides of the region.

Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:

  1. If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
Method 2:
  1. If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
Method 3:
  1. If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
  2. If the size of the region is greater than 30 Kb, the score will be increased by 10.
  3. If there are at least 40 proteins in the region, the score will be increased by 10.
  4. If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
Compared the total score of method 2 with the total score of method 3, the bigger one is chosen as the total score of the region.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.

gi|00000000|ref|UFYK01000001.1| Edwardsiella tarda strain NCTC10397 genome assembly, contig: 3640975, gc%: 57.28%

Download details as .txt file: detail.txt file_download

Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File

Region 1, total 45 CDS

#CDS PositionBLAST HitE-ValueSequence
142877..42921attL0.0Showinfo_outline
2complement(43029..44009)PHAGE_Salmon_SEN5_NC_028701: integrase; NCTC10397_00043; phage(gi966201588)0.0Showinfo_outline
344512..44748Uncharacterised protein; NCTC10397_000440.0Showinfo_outline
4complement(44763..45248)Uncharacterised protein; NCTC10397_000450.0Showinfo_outline
545628..45909PHAGE_Salmon_SEN5_NC_028701: regulatory protein Cox; NCTC10397_00046; phage(gi966201593)1.06e-62Showinfo_outline
646023..46289Uncharacterised protein; NCTC10397_000470.0Showinfo_outline
746699..46941Uncharacterised protein; NCTC10397_000480.0Showinfo_outline
846926..47450PHAGE_Pseudo_PMG1_NC_016765: hypothetical protein; NCTC10397_00049; phage(gi374531705)2.65e-05Showinfo_outline
947447..47749Uncharacterised protein; NCTC10397_000500.0Showinfo_outline
1047736..47948PHAGE_Entero_P88_NC_026014: hypothetical protein; NCTC10397_00051; phage(gi744692708)2.38e-05Showinfo_outline
1147945..48772PHAGE_Salmon_RE_2010_NC_019488: DNA adenine methyltransferase; NCTC10397_00052; phage(gi418489691)2.33e-114Showinfo_outline
1249421..49882Uncharacterised protein; NCTC10397_000550.0Showinfo_outline
1349886..52336PHAGE_Entero_P88_NC_026014: replication protein; NCTC10397_00056; phage(gi744692716)0.0Showinfo_outline
1452391..52576Uncharacterised protein; NCTC10397_000570.0Showinfo_outline
15complement(53081..53326)Phage-related protein; NCTC10397_000580.0Showinfo_outline
1654010..54513Uncharacterised protein; NCTC10397_000590.0Showinfo_outline
17complement(54580..55623)PHAGE_Entero_P88_NC_026014: PBSX family portal protein; NCTC10397_00060; phage(gi744692723)0.0Showinfo_outline
18complement(55629..57359)PHAGE_Entero_P88_NC_026014: terminase ATPase subunit; NCTC10397_00061; phage(gi744692724)0.0Showinfo_outline
1957519..58352PHAGE_Entero_P88_NC_026014: capsid scaffolding protein; NCTC10397_00062; phage(gi744692725)3.96e-136Showinfo_outline
2058377..59429PHAGE_Entero_P88_NC_026014: major capsid protein; NCTC10397_00063; phage(gi744692726)0.0Showinfo_outline
2159481..60272PHAGE_Entero_P88_NC_026014: terminase endonuclease subunit; NCTC10397_00064; phage(gi744692727)3.74e-109Showinfo_outline
2260373..60867PHAGE_Entero_P88_NC_026014: head completion-stabilization protein; NCTC10397_00065; phage(gi744692728)1.38e-49Showinfo_outline
2360867..61067PHAGE_Entero_P88_NC_026014: tail component protein; NCTC10397_00066; phage(gi744692729)8.54e-29Showinfo_outline
2461070..61351Uncharacterised protein; NCTC10397_000670.0Showinfo_outline
2561335..61880PHAGE_Mannhe_phiMHaA1_NC_008201: endolysin; NCTC10397_00068; phage(gi109289945)2.50e-35Showinfo_outline
2661877..62317PHAGE_Entero_P88_NC_026014: hypothetical protein; NCTC10397_00069; phage(gi744692732)4.47e-14Showinfo_outline
2762432..62899PHAGE_Entero_P88_NC_026014: tail completion protein; NCTC10397_00070; phage(gi744692733)6.52e-50Showinfo_outline
2862892..63536PHAGE_Entero_P88_NC_026014: tail protein; NCTC10397_00071; phage(gi744692734)3.84e-67Showinfo_outline
2963533..64114PHAGE_Entero_P88_NC_026014: baseplate assembly protein V; NCTC10397_00072; phage(gi744692735)1.58e-90Showinfo_outline
3064111..64455PHAGE_Entero_P88_NC_026014: lysozyme family baseplate assembly protein; NCTC10397_00073; phage(gi744692736)7.15e-44Showinfo_outline
3164465..65361PHAGE_Entero_P88_NC_026014: baseplate assembly protein J; NCTC10397_00074; phage(gi744692737)9.66e-130Showinfo_outline
3265354..65968PHAGE_Salmon_SEN5_NC_028701: tail fibers protein; NCTC10397_00075; phage(gi966201573)2.10e-78Showinfo_outline
3365958..67901PHAGE_Entero_fiAA91_ss_NC_022750: tail fiber; NCTC10397_00076; phage(gi557307600)3.70e-158Showinfo_outline
3467901..68428PHAGE_Entero_P88_NC_026014: tail fiber assembly protein; NCTC10397_00077; phage(gi744692740)2.92e-39Showinfo_outline
35complement(68460..68810)PHAGE_Edward_MSW_3_NC_020082: putative tail assembly chaperone; NCTC10397_00078; phage(gi448261067)5.37e-31Showinfo_outline
36complement(68807..69547)PHAGE_Salmon_SP_004_NC_021774: phage tail fiber protein; NCTC10397_00079; phage(gi526003631)2.95e-12Showinfo_outline
3769597..70178PHAGE_Entero_Mu_NC_000929: Gin; NCTC10397_00080; phage(gi9633542)3.51e-88Showinfo_outline
38complement(70546..71034)PHAGE_Entero_P88_NC_026014: tail protein; NCTC10397_00081; phage(gi744692744)4.31e-86Showinfo_outline
39complement(71050..73965)PHAGE_Entero_P88_NC_026014: tail tape measure protein; NCTC10397_00082; phage(gi744692745)0.0Showinfo_outline
40complement(74173..74589)PHAGE_Entero_P88_NC_026014: tail protein; NCTC10397_00083; phage(gi744692747)1.62e-20Showinfo_outline
41complement(74638..75153)PHAGE_Entero_P88_NC_026014: major tail tube protein; NCTC10397_00084; phage(gi744692748)5.01e-85Showinfo_outline
42complement(75154..76341)PHAGE_Entero_P88_NC_026014: tail sheath monomer; NCTC10397_00085; phage(gi744692749)0.0Showinfo_outline
4376506..77630PHAGE_Entero_P88_NC_026014: gene D protein; NCTC10397_00086; phage(gi744692751)0.0Showinfo_outline
4477676..77927PHAGE_Salmon_SP_004_NC_021774: Ogr; NCTC10397_00087; phage(gi526003639)3.36e-09Showinfo_outline
4578045..78089attR0.0Showinfo_outline

Region 2, total 53 CDS

#CDS PositionBLAST HitE-ValueSequence
11653872..1653884attL0.0Showinfo_outline
2complement(1665587..1666702)PHAGE_Entero_HK106_NC_019768: integrase; NCTC10397_01555; phage(gi428783305)2.89e-67Showinfo_outline
3complement(1666689..1666934)PHAGE_Entero_mEp235_NC_019708: excisionase; NCTC10397_01556; phage(gi428781837)6.73e-06Showinfo_outline
4complement(1667010..1667291)PHAGE_Phage_Gifsy_2_NC_010393: putatitive bacteriophage exodeoxyribonuclease VIII; NCTC10397_01557; phage(gi169257272)3.04e-09Showinfo_outline
5complement(1667489..1668112)PHAGE_Entero_mEp460_NC_019716: regulatory protein Rha; NCTC10397_01558; phage(gi428782357)5.81e-35Showinfo_outline
6complement(1668936..1670465)Uncharacterised protein; NCTC10397_015600.0Showinfo_outline
7complement(1670765..1671115)Uncharacterised protein; NCTC10397_015610.0Showinfo_outline
81671284..1671544Uncharacterised protein; NCTC10397_015620.0Showinfo_outline
9complement(1671573..1671896)Uncharacterised protein; NCTC10397_015630.0Showinfo_outline
101672370..1672882Uncharacterised protein; NCTC10397_015640.0Showinfo_outline
111672900..1673925Predicted P-loop ATPase; NCTC10397_015650.0Showinfo_outline
121674021..1674470PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; NCTC10397_01566; phage(gi557307562)8.32e-20Showinfo_outline
13complement(1674439..1674636)Uncharacterised protein; NCTC10397_015670.0Showinfo_outline
14complement(1675106..1675777)PHAGE_Pectob_ZF40_NC_019522: putative cI repressor; NCTC10397_01568; phage(gi422936650)2.27e-94Showinfo_outline
151675869..1676048PHAGE_Pectob_ZF40_NC_019522: putative cro anti-repressor; NCTC10397_01569; phage(gi422936651)6.21e-23Showinfo_outline
161676093..1676608PHAGE_Entero_mEp390_NC_019721: hypothetical protein; NCTC10397_01570; phage(gi428782704)1.62e-31Showinfo_outline
171676614..1676979Uncharacterised protein; NCTC10397_015710.0Showinfo_outline
18complement(1677026..1677310)PHAGE_Burkho_phiE202_NC_009234: gp7, pANL12; NCTC10397_01572; phage(gi134288781)2.06e-23Showinfo_outline
19complement(1677270..1677542)PHAGE_Burkho_phiE202_NC_009234: gp6, pANL56; NCTC10397_01573; phage(gi134288760)2.04e-39Showinfo_outline
201677858..1678415PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; NCTC10397_01576; phage(gi100120)9.95e-82Showinfo_outline
211678408..1679442PHAGE_Shigel_SfIV_NC_022749: replication protein; NCTC10397_01577; phage(gi557307567)2.00e-109Showinfo_outline
221679439..1680173PHAGE_Entero_Tyrion_NC_031077: ssDNA binding protein; NCTC10397_01578; phage(gi100044)4.02e-56Showinfo_outline
231680170..1680418Uncharacterised protein; NCTC10397_015790.0Showinfo_outline
241680408..1680806PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC10397_01580; phage(gi428782365)1.92e-40Showinfo_outline
251680823..1681209PHAGE_Entero_cdtI_NC_009514: antitermination protein Q; NCTC10397_01581; phage(gi148609434)1.85e-57Showinfo_outline
26complement(1681215..1682228)Uncharacterised protein; NCTC10397_015820.0Showinfo_outline
271682318..1682884PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC10397_01583; phage(gi428782340)9.92e-16Showinfo_outline
281683031..1683345PHAGE_Salmon_Fels_1_NC_010391: bacteriophage lysis protein; holin; NCTC10397_01584; phage(gi169257181)1.72e-30Showinfo_outline
291683348..1683899PHAGE_Erwini_vB_EamP_S6_NC_019514: endolysin; NCTC10397_01585; phage(gi422935930)1.34e-84Showinfo_outline
301684332..1684547PHAGE_Entero_mEp237_NC_019704: hypothetical protein; NCTC10397_01586; phage(gi435439326)2.61e-18Showinfo_outline
311684722..1685312PHAGE_Acinet_LZ35_NC_031117: hypothetical protein; NCTC10397_01587; phage(gi100051)1.51e-27Showinfo_outline
321685330..1685728PHAGE_Entero_SfV_NC_003444: putative Rz lytic protein; NCTC10397_01588; phage(gi19549038)1.97e-26Showinfo_outline
33complement(1685999..1686505)Uncharacterised protein; NCTC10397_015890.0Showinfo_outline
341686858..1687394PHAGE_Entero_mEp460_NC_019716: terminase small subunit; NCTC10397_01590; phage(gi428782317)2.25e-35Showinfo_outline
351687363..1689459PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, large subunit; NCTC10397_01591; phage(gi169257299)0.0Showinfo_outline
361689456..1689671PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC10397_01592; phage(gi428782319)4.89e-16Showinfo_outline
371689668..1691182PHAGE_Entero_mEp460_NC_019716: portal protein; NCTC10397_01593; phage(gi428782320)0.0Showinfo_outline
381691127..1693127PHAGE_Entero_mEp460_NC_019716: putative protease/scaffold protein; NCTC10397_01594; phage(gi428782321)0.0Showinfo_outline
391693180..1693503PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC10397_01595; phage(gi428782322)5.13e-24Showinfo_outline
401693496..1693777PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC10397_01596; phage(gi428782323)2.77e-18Showinfo_outline
411693774..1694319PHAGE_Entero_HK225_NC_019717: minor tail protein Z; NCTC10397_01597; phage(gi428782386)2.17e-40Showinfo_outline
421694316..1694747PHAGE_Entero_mEp460_NC_019716: minor tail protein; NCTC10397_01598; phage(gi428782325)2.24e-29Showinfo_outline
431694744..1695226PHAGE_Entero_HK225_NC_019717: major tail protein V; NCTC10397_01599; phage(gi428782388)4.06e-55Showinfo_outline
441695238..1695624PROPHAGE_Escher_Sakai: putative minor tail protein; NCTC10397_01600; phage(gi15832205)6.29e-09Showinfo_outline
451695633..1695956PHAGE_Entero_mEp460_NC_019716: tail assembly protein; NCTC10397_01601; phage(gi428782328)3.07e-27Showinfo_outline
461695934..1698750PHAGE_Entero_mEp460_NC_019716: tail length tape measure protein; NCTC10397_01602; phage(gi428782329)4.47e-175Showinfo_outline
471698750..1699079PHAGE_Entero_mEp460_NC_019716: minor tail protein; NCTC10397_01603; phage(gi428782330)4.33e-40Showinfo_outline
481699076..1699768PHAGE_Entero_mEp460_NC_019716: minor tail protein; NCTC10397_01604; phage(gi428782331)1.30e-98Showinfo_outline
491699777..1700511PHAGE_Entero_mEp460_NC_019716: tail fiber component; NCTC10397_01605; phage(gi428782332)3.30e-117Showinfo_outline
501700541..1701050PHAGE_Entero_mEp460_NC_019716: tail assembly protein; NCTC10397_01606; phage(gi428782333)8.92e-61Showinfo_outline
511701068..1704409PHAGE_Entero_mEp460_NC_019716: host specificity protein; NCTC10397_01607; phage(gi428782334)0.0Showinfo_outline
521703417..1703429attR0.0Showinfo_outline
531704437..1707529PHAGE_Entero_HK97_NC_002167: tail fiber; NCTC10397_01608; phage(gi9634179)5.06e-49Showinfo_outline

Region 3, total 66 CDS

#CDS PositionBLAST HitE-ValueSequence
1complement(2653809..2657951)PROPHAGE_Escher_CFT073: Pic serine protease precursor; NCTC10397_02486; phage(gi26246250)0.0Showinfo_outline
2complement(2658525..2658947)Uncharacterised protein; NCTC10397_024870.0Showinfo_outline
3complement(2659782..2660177)PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; NCTC10397_02488; phage(gi557307573)1.64e-33Showinfo_outline
4complement(2660204..2660476)PHAGE_Entero_P1_NC_005856: InsA; NCTC10397_02489; phage(gi46401643)1.93e-21Showinfo_outline
5complement(2660892..2662232)PHAGE_Vibrio_VHML_NC_004456: ORF37; NCTC10397_02490; phage(gi27311204)8.70e-08Showinfo_outline
6complement(2662235..2662804)Uncharacterised protein; NCTC10397_024910.0Showinfo_outline
72663323..2663334attL0.0Showinfo_outline
8complement(2663359..2663631)PHAGE_Vibrio_K139_NC_003313: zinc-finger protein; NCTC10397_02492; phage(gi17975123)1.52e-22Showinfo_outline
92664294..2664593PHAGE_Shigel_SfII_NC_021857: hypothetical protein; NCTC10397_02493; phage(gi526244690)6.60e-44Showinfo_outline
102664782..2665459PHAGE_Shigel_SfII_NC_021857: hypothetical protein; NCTC10397_02494; phage(gi526244689)5.84e-74Showinfo_outline
112665705..2665752attL0.0Showinfo_outline
12complement(2666225..2667799)PHAGE_Stx2_c_1717_NC_011357: putative tail fiber protein; NCTC10397_02495; phage(gi209447198)2.11e-35Showinfo_outline
13complement(2667832..2671173)PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage host-specificity protein; Lambda gpJ homolog; NCTC10397_02496; phage(gi169257203)0.0Showinfo_outline
14complement(2671233..2671778)PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpI homolog; NCTC10397_02497; phage(gi169257316)2.35e-60Showinfo_outline
15complement(2671775..2672512)PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage tail assembly protein; Lambda gpK homolog; NCTC10397_02498; phage(gi169257200)4.89e-117Showinfo_outline
16complement(2672581..2673363)PHAGE_Salmon_SPN3UB_NC_019545: putative antirepressor family protein; NCTC10397_02499; phage(gi423262399)1.82e-100Showinfo_outline
17complement(2673436..2674056)PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; NCTC10397_02500; phage(gi423262398)2.26e-33Showinfo_outline
18complement(2674046..2674219)Arc-like DNA binding domain; NCTC10397_025010.0Showinfo_outline
192674345..2674758Uncharacterised protein; NCTC10397_025020.0Showinfo_outline
20complement(2674765..2675463)PHAGE_Entero_lambda_NC_001416: tail component; NCTC10397_02503; phage(gi9626261)2.48e-101Showinfo_outline
21complement(2675473..2675802)PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpM homolog; NCTC10397_02504; phage(gi169257220)4.04e-32Showinfo_outline
22complement(2675854..2676207)PHAGE_Entero_ES18_NC_006949: gp20; NCTC10397_02505; phage(gi62362233)2.26e-05Showinfo_outline
23complement(2676261..2679185)PHAGE_Pseudo_phiPSA1_NC_024365: tail tape measure protein; NCTC10397_02506; phage(gi658307709)4.42e-34Showinfo_outline
24complement(2679417..2679755)PHAGE_Klebsi_phiKO2_NC_005857: putative tail assembly chaperone; NCTC10397_02507; phage(gi46402099)2.61e-16Showinfo_outline
25complement(2679765..2680220)PHAGE_Klebsi_phiKO2_NC_005857: major tail shaft subunit; NCTC10397_02508; phage(gi46402098)1.96e-35Showinfo_outline
26complement(2680266..2680676)PHAGE_Bacill_phiCM3_NC_023599: head-tail joining protein; NCTC10397_02509; phage(gi589892720)5.56e-06Showinfo_outline
27complement(2680680..2681060)PHAGE_Yersin_PY54_NC_005069: hypothetical protein; NCTC10397_02510; phage(gi33770518)2.26e-42Showinfo_outline
28complement(2681041..2681385)PHAGE_Clostr_phiCD506_NC_028838: putative phage head-tail adaptor; NCTC10397_02511; phage(gi971819915)6.31e-07Showinfo_outline
29complement(2681382..2681711)PHAGE_Shigel_SfII_NC_021857: head-tail connector protein; NCTC10397_02512; phage(gi526244642)2.67e-11Showinfo_outline
30complement(2681721..2681996)PHAGE_Entero_mEp235_NC_019708: head-tail connector I; NCTC10397_02513; phage(gi428781816)4.05e-11Showinfo_outline
31complement(2682045..2683268)PHAGE_Entero_mEp235_NC_019708: major head subunit; NCTC10397_02514; phage(gi428781815)0.0Showinfo_outline
32complement(2683281..2684138)PHAGE_Entero_mEp235_NC_019708: head maturation protease; NCTC10397_02515; phage(gi428781814)3.78e-144Showinfo_outline
33complement(2684146..2685474)PHAGE_Entero_mEp235_NC_019708: portal protein; NCTC10397_02516; phage(gi428781813)0.0Showinfo_outline
34complement(2685474..2687216)PHAGE_Paraco_Shpa_NC_041868: hypothetical protein; NCTC10397_02517; phage(gi100003)8.36e-160Showinfo_outline
35complement(2687170..2687637)PHAGE_Shigel_SfII_NC_021857: small terminase subunit; NCTC10397_02518; phage(gi526244637)1.18e-15Showinfo_outline
36complement(2687725..2688069)PHAGE_Entero_mEp390_NC_019721: hypothetical protein; NCTC10397_02519; phage(gi428782721)7.03e-50Showinfo_outline
37complement(2688996..2689397)PHAGE_Entero_SfV_NC_003444: putative Rz lytic protein; NCTC10397_02520; phage(gi19549038)6.86e-24Showinfo_outline
38complement(2689501..2690316)PHAGE_Escher_PA28_NC_041935: hypothetical protein; NCTC10397_02521; phage(gi100008)3.17e-27Showinfo_outline
39complement(2691037..2691918)PHAGE_Salmon_SE2_NC_016763: DNA methylase N-4/N-6 domain protein; NCTC10397_02522; phage(gi375267272)3.24e-67Showinfo_outline
40complement(2692021..2692554)PHAGE_Entero_mEp460_NC_019716: endolysin; NCTC10397_02523; phage(gi428782372)8.10e-95Showinfo_outline
41complement(2692559..2692828)PHAGE_Entero_phi80_NC_021190: holin; NCTC10397_02524; phage(gi824479635)1.64e-07Showinfo_outline
422693017..2693295Uncharacterised protein; NCTC10397_025250.0Showinfo_outline
43complement(2694125..2694661)Protein of uncharacterised function (DUF1133); NCTC10397_025260.0Showinfo_outline
44complement(2694678..2695715)PHAGE_Shigel_SfII_NC_021857: hypothetical protein; NCTC10397_02527; phage(gi526244681)5.98e-74Showinfo_outline
45complement(2695721..2695939)PHAGE_Shigel_SfII_NC_021857: LexA DNA binding domain protein; NCTC10397_02528; phage(gi526244678)4.73e-13Showinfo_outline
46complement(2695936..2696622)PHAGE_Entero_phiP27_NC_003356: hypothetical protein; NCTC10397_02529; phage(gi18249878)4.81e-28Showinfo_outline
47complement(2696788..2697180)PHAGE_Salmon_118970_sal3_NC_031940: ribonucleotide reductase A subunit; NCTC10397_02530; phage(gi100062)6.67e-44Showinfo_outline
48complement(2697177..2697746)PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; NCTC10397_02531; phage(gi100029)1.67e-99Showinfo_outline
49complement(2697743..2697985)Uncharacterised protein; NCTC10397_025320.0Showinfo_outline
50complement(2697982..2698719)PHAGE_Escher_phiV10_NC_007804: putative replication protein p; NCTC10397_02533; phage(gi155370096)5.34e-58Showinfo_outline
51complement(2698716..2699642)PHAGE_Burkho_Bcep176_NC_007497: gp11; NCTC10397_02534; phage(gi77864636)2.51e-20Showinfo_outline
52complement(2699654..2699827)Uncharacterised protein; NCTC10397_025350.0Showinfo_outline
53complement(2700025..2700558)PHAGE_Shigel_SfII_NC_021857: transcriptional regulator; NCTC10397_02536; phage(gi526244673)4.89e-05Showinfo_outline
542700915..2701679PHAGE_Shigel_POCJ13_NC_025434: putative transcriptional regulator; NCTC10397_02537; phage(gi725949713)2.88e-96Showinfo_outline
552702443..2703354PHAGE_Escher_RCS47_NC_042128: hypothetical protein; NCTC10397_02538; phage(gi100079)3.21e-113Showinfo_outline
562703351..2704376PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC10397_02539; phage(gi764162291)6.91e-26Showinfo_outline
572704369..2704752PHAGE_Escher_phi191_NC_028660: hypothetical protein; NCTC10397_02540; phage(gi966198062)4.25e-24Showinfo_outline
582704756..2705271Uncharacterised protein; NCTC10397_025410.0Showinfo_outline
592705273..2705563Uncharacterised protein; NCTC10397_025420.0Showinfo_outline
602705567..2705974PHAGE_Shigel_Stx_NC_029120: EaA protein; NCTC10397_02543; phage(gi985761317)1.21e-24Showinfo_outline
612705967..2706572PHAGE_Salmon_g341c_NC_013059: endonuclease; NCTC10397_02544; phage(gi255252712)1.14e-17Showinfo_outline
622706572..2706856PHAGE_Entero_ST104_NC_005841: ORF7; NCTC10397_02545; phage(gi46358655)5.01e-30Showinfo_outline
632706849..2707667PHAGE_Serrat_Eta_NC_021563: putative parB-like partition protein; NCTC10397_02546; phage(gi514361056)1.33e-86Showinfo_outline
642707894..2709042PHAGE_Salmon_ST64T_NC_004348: integrase; NCTC10397_02547; phage(gi24371538)0.0Showinfo_outline
652709069..2709116attR0.0Showinfo_outline
662712991..2713002attR0.0Showinfo_outline
Click on a region to see details.
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)

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Length: 3640975 bps
Phages: 3
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Click on a region in the genome above to show details here.
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Click on a sequence to see details.
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Click on a sequence to see details.
Lysis
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Fiber Protein
Plate Protein
tRNA

Download data as .txt file: png_input file_download