Submission Results

Sequence Name: Not Available

GenBank Accession Number: UFYN01000008.1

GenInfo (GI) Number: 0000000000

Download Results: UFYN01000008.1.PHASTER.zip

gi|00000000|ref|UFYN01000008.1| Escherichia coli strain NCTC11181 genome assembly, contig: 837299, gc%: 49.48%

Download summary as .txt file: summary.txt file_download

Total: 4 prophage regions have been identified, of which 2 regions are intact, 2 regions are incomplete, and 0 regions are questionable.

RegionRegion LengthCompletenessScore# Total ProteinsRegion PositionMost Common PhageGC %Details
147.7Kbintact15057219805-267576 info_outlinePHAGE_Edward_GF_2_NC_026611(16)50.61%Show info_outline
234Kbincomplete6020312359-346451 info_outlinePHAGE_Entero_RB49_NC_005066(3)41.90%Show info_outline
359.1Kbintact15073756842-815996 info_outlinePHAGE_Salmon_SEN34_NC_028699(23)49.16%Show info_outline
48.7Kbincomplete3016827801-836589 info_outlinePHAGE_Entero_Mu_NC_000929(13)50.36%Show info_outline
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Region: The number assigned to the region.
Region Length: The length of the sequence of that region (in bp).
Completeness: A prediction of whether the region contains a intact or incomplete prophage based on the above criteria.
Score: The score of the region based on the above criteria.
# Total Proteins: The number of ORFs present in the region.
Region Position: The start and end positions of the region on the bacterial chromosome.
Most Common Phage: The phage(s) with the highest number of proteins most similar to those in the region.
GC %: The percentage of GC nucleotides of the region.

Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:

  1. If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
Method 2:
  1. If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
Method 3:
  1. If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
  2. If the size of the region is greater than 30 Kb, the score will be increased by 10.
  3. If there are at least 40 proteins in the region, the score will be increased by 10.
  4. If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
Compared the total score of method 2 with the total score of method 3, the bigger one is chosen as the total score of the region.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.

gi|00000000|ref|UFYN01000008.1| Escherichia coli strain NCTC11181 genome assembly, contig: 837299, gc%: 49.48%

Download details as .txt file: detail.txt file_download

Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File

Region 1, total 63 CDS

#CDS PositionBLAST HitE-ValueSequence
1complement(219805..221037)PHAGE_Bacill_SP_15_NC_031245: hypothetical protein; NCTC11181_04789; phage(gi100150)5.82e-21Showinfo_outline
2221292..222275zinc transport protein; NCTC11181_047900.0Showinfo_outline
3222550..222723Uncharacterised protein; NCTC11181_047920.0Showinfo_outline
4222753..224126PHAGE_Entero_CAjan_NC_028776: helicase-like protein; NCTC11181_04793; phage(gi971742387)6.64e-07Showinfo_outline
5complement(224255..225190)C32 tRNA thiolase; NCTC11181_047940.0Showinfo_outline
6225211..225222attL0.0Showinfo_outline
7complement(225242..226477)PROPHAGE_Escher_Sakai: putative integrase; NCTC11181_04795; phage(gi15832267)2.60e-112Showinfo_outline
8complement(226479..226694)PHAGE_Escher_phi191_NC_028660: hypothetical protein; NCTC11181_04796; phage(gi966198069)5.82e-05Showinfo_outline
9complement(226794..226982)Rac prophage; predicted protein; NCTC11181_047970.0Showinfo_outline
10complement(227022..228119)PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; NCTC11181_04798; phage(gi401817570)0.0Showinfo_outline
11complement(228125..228421)PHAGE_Entero_Min27_NC_010237: host-nuclease inhibitor protein Gam; NCTC11181_04799; phage(gi170783625)4.12e-54Showinfo_outline
12complement(228399..230339)PHAGE_Shigel_Stx_NC_029120: exodeoxyribonuclease VIII; NCTC11181_04800; phage(gi985761253)0.0Showinfo_outline
13complement(230363..230659)PHAGE_Entero_HK225_NC_019717: hypothetical protein; NCTC11181_04801; phage(gi428782411)6.63e-14Showinfo_outline
14complement(230855..231358)PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; NCTC11181_04802; phage(gi557307573)2.90e-111Showinfo_outline
15231644..232009PHAGE_Entero_HK225_NC_019717: HNH endonuclease; NCTC11181_04803; phage(gi428782431)9.36e-45Showinfo_outline
16232006..232671PHAGE_Escher_Av_05_NC_025830: hypothetical protein; NCTC11181_04804; phage(gi730985112)1.26e-44Showinfo_outline
17232671..233036PHAGE_Stx2_c_86_NC_008464: hypothetical protein; NCTC11181_04805; phage(gi116222036)4.26e-39Showinfo_outline
18233925..234137PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; NCTC11181_04807; phage(gi423262436)1.19e-06Showinfo_outline
19234209..234736PHAGE_Entero_mEp237_NC_019704: hypothetical protein; NCTC11181_04808; phage(gi435439315)1.23e-60Showinfo_outline
20234808..235098PHAGE_Erwini_phiEt88_NC_015295: hypothetical protein; NCTC11181_04809; phage(gi327198620)1.86e-40Showinfo_outline
21235095..235649antitermination protein; NCTC11181_048100.0Showinfo_outline
22236688..236764tRNA0.0Showinfo_outline
23236766..236842tRNA0.0Showinfo_outline
24236845..236920tRNA0.0Showinfo_outline
25236924..236998tRNA0.0Showinfo_outline
26237291..237506PHAGE_Entero_VT2phi_272_NC_028656: holin; NCTC11181_04817; phage(gi966197762)6.06e-36Showinfo_outline
27237506..238003PHAGE_Stx2_c_1717_NC_011357: phage-related lysozyme; NCTC11181_04818; phage(gi209447172)4.80e-118Showinfo_outline
28238000..238467PHAGE_Salmon_HK620_NC_002730: endopeptidase; NCTC11181_04819; phage(gi13559860)2.73e-102Showinfo_outline
29238670..239266PHAGE_Pseudo_vB_PsyM_KIL4_NC_042054: hypothetical protein; NCTC11181_04820; phage(gi100030)6.28e-23Showinfo_outline
30239263..239475PHAGE_Aeromo_pIS4_A_NC_042037: dsDNA binding protein; NCTC11181_04821; phage(gi100047)1.56e-05Showinfo_outline
31239599..240153PHAGE_Cronob_phiES15_NC_018454: terminase small subunit; NCTC11181_04822; phage(gi401817591)6.36e-61Showinfo_outline
32240156..241775PHAGE_Salmon_SEN34_NC_028699: terminase large subunit; NCTC11181_04823; phage(gi966201419)0.0Showinfo_outline
33241775..243316PHAGE_Aeromo_vB_AsaM_56_NC_019527: putative portal protein; NCTC11181_04824; phage(gi422937534)4.78e-124Showinfo_outline
34243276..244046PHAGE_Edward_GF_2_NC_026611: putative head protein; NCTC11181_04825; phage(gi764162251)2.42e-71Showinfo_outline
35244043..245392PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC11181_04826; phage(gi764162253)1.51e-39Showinfo_outline
36245394..245876PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC11181_04827; phage(gi764162254)1.27e-29Showinfo_outline
37245876..246904PHAGE_Burkho_BcepNY3_NC_009604: major capsid protein; NCTC11181_04828; phage(gi149882911)5.51e-97Showinfo_outline
38246908..247255PHAGE_Aeromo_vB_AsaM_56_NC_019527: hypothetical protein; NCTC11181_04829; phage(gi422937543)3.03e-14Showinfo_outline
39247261..247719PHAGE_Xantho_OP2_NC_007710: hypothetical protein; NCTC11181_04830; phage(gi84662659)2.83e-27Showinfo_outline
40247709..248293PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC11181_04831; phage(gi764162258)3.16e-16Showinfo_outline
41248290..248655PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC11181_04832; phage(gi764162259)9.89e-28Showinfo_outline
42248640..249185PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC11181_04833; phage(gi764162260)6.44e-15Showinfo_outline
43249166..250650PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC11181_04834; phage(gi764162261)4.91e-119Showinfo_outline
44250651..251097PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC11181_04835; phage(gi764162262)2.92e-23Showinfo_outline
45251097..251501PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC11181_04836; phage(gi764162263)1.79e-17Showinfo_outline
46251709..253730PHAGE_Salmon_SEN34_NC_028699: tail tape measure protein; NCTC11181_04837; phage(gi966201433)3.16e-54Showinfo_outline
47253727..254437PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC11181_04838; phage(gi764162271)5.11e-31Showinfo_outline
48254437..254739PHAGE_Edward_GF_2_NC_026611: putative structural protein; NCTC11181_04839; phage(gi764162272)4.53e-31Showinfo_outline
49254736..255605PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC11181_04840; phage(gi764162273)3.46e-32Showinfo_outline
50255586..256263PHAGE_Edward_GF_2_NC_026611: putative baseplate protein; NCTC11181_04841; phage(gi764162274)5.12e-38Showinfo_outline
51256276..256632PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC11181_04842; phage(gi764162275)2.35e-27Showinfo_outline
52256629..257870PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC11181_04843; phage(gi764162276)9.32e-128Showinfo_outline
53257872..258477PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC11181_04844; phage(gi764162277)4.27e-39Showinfo_outline
54258464..258658PHAGE_Acinet_phiAC_1_NC_028995: putative tail fiber protein; NCTC11181_04845; phage(gi971763839)6.59e-07Showinfo_outline
55complement(258653..259849)PROPHAGE_Escher_CFT073: transposase; NCTC11181_04846; phage(gi26248352)0.0Showinfo_outline
56260113..261300PHAGE_Entero_phiP27_NC_003356: putative tail fiber protein; NCTC11181_04847; phage(gi18249918)1.75e-84Showinfo_outline
57261303..261848PHAGE_Entero_phiP27_NC_003356: putative tail fiber assembly protein; NCTC11181_04848; phage(gi18249919)4.99e-95Showinfo_outline
58261872..263137PHAGE_Entero_phiP27_NC_003356: putative tail fiber protein; NCTC11181_04849; phage(gi18249920)6.90e-109Showinfo_outline
59263094..263711PHAGE_Escher_Av_05_NC_025830: tail fiber protein; NCTC11181_04850; phage(gi730985066)7.89e-41Showinfo_outline
60complement(263912..264769)iron/manganese transport system membrane protein SitD; NCTC11181_048510.0Showinfo_outline
61complement(264766..265623)iron ABC transporter permease; NCTC11181_048520.0Showinfo_outline
62complement(265620..266447)PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; NCTC11181_04853; phage(gi371496158)9.85e-14Showinfo_outline
63267576..267587attR0.0Showinfo_outline

Region 2, total 22 CDS

#CDS PositionBLAST HitE-ValueSequence
1312359..312370attL0.0Showinfo_outline
2327248..330853PHAGE_Entero_RB49_NC_005066: large distal tail fiber subunit; NCTC11181_04915; phage(gi33620684)0.0Showinfo_outline
3330910..331383PHAGE_Vibrio_12B8_NC_021073: hypothetical protein; NCTC11181_04916; phage(gi481019752)4.56e-08Showinfo_outline
4331552..332058PHAGE_Escher_P13374_NC_018846: tail fibre adesine; NCTC11181_04917; phage(gi410491661)3.93e-40Showinfo_outline
5332101..332409Uncharacterised protein; NCTC11181_049180.0Showinfo_outline
6332439..332780Uncharacterised protein; NCTC11181_049190.0Showinfo_outline
7332792..335224PHAGE_Pantoe_vB_PagS_Vid5_NC_042120: exonuclease A; NCTC11181_04920; phage(gi100018)1.04e-25Showinfo_outline
8335275..335835PHAGE_Vibrio_12B8_NC_021073: hypothetical protein; NCTC11181_04921; phage(gi481019747)2.03e-06Showinfo_outline
9335835..336488PHAGE_Vibrio_12B8_NC_021073: hypothetical protein; NCTC11181_04922; phage(gi481019746)3.42e-09Showinfo_outline
10336535..336954PHAGE_Salmon_(in:Nonagvirus)_NC_042025: hypothetical protein; NCTC11181_04923; phage(gi100003)7.27e-06Showinfo_outline
11336954..340730PHAGE_Entero_YYZ_2008_NC_011356: phage-related tail protein; NCTC11181_04924; phage(gi209427791)4.04e-48Showinfo_outline
12340835..341113Uncharacterised protein; NCTC11181_049250.0Showinfo_outline
13341132..341302Uncharacterised protein; NCTC11181_049260.0Showinfo_outline
14341304..341987Uncharacterised protein; NCTC11181_049270.0Showinfo_outline
15342026..342373Uncharacterised protein; NCTC11181_049280.0Showinfo_outline
16342383..342736PHAGE_Salmon_BP12B_NC_031271: ssDNA binding protein; NCTC11181_04929; phage(gi100044)8.22e-48Showinfo_outline
17342729..342926PHAGE_Entero_GEC_3S_NC_025425: Putative inhibitor of prohead protease; NCTC11181_04930; phage(gi754380771)1.07e-06Showinfo_outline
18342943..342954attR0.0Showinfo_outline
19complement(343271..344950)PHAGE_Strept_phiARI0462_NC_031942: hypothetical protein; DLP12; phage prophage; NCTC11181_04931(gi100051)1.67e-09Showinfo_outline
20complement(345014..345433)Uncharacterised protein; NCTC11181_049320.0Showinfo_outline
21complement(345742..346179)PHAGE_Entero_JSE_NC_012740: hypothetical protein; NCTC11181_04933; phage(gi238695075)7.22e-17Showinfo_outline
22complement(346179..346451)PHAGE_Escher_SRT8_NC_042043: hypothetical protein; NCTC11181_04934; phage(gi100058)1.78e-20Showinfo_outline

Region 3, total 79 CDS

#CDS PositionBLAST HitE-ValueSequence
1756842..756854attL0.0Showinfo_outline
2complement(761942..762598)PHAGE_Entero_mEp213_NC_019720: NinI protein; NCTC11181_05325; phage(gi428782655)3.17e-69Showinfo_outline
3763340..765055putative type III effector protein (leucine-rich repeat protein); NCTC11181_053260.0Showinfo_outline
4complement(765056..765235)PHAGE_Entero_SfMu_NC_027382: tail fiber assembly protein; NCTC11181_05327; phage(gi849255281)7.57e-08Showinfo_outline
5complement(765235..765852)PHAGE_Escher_Av_05_NC_025830: tail fiber protein; NCTC11181_05328; phage(gi730985066)6.41e-42Showinfo_outline
6complement(766159..767073)PHAGE_Entero_phiP27_NC_003356: putative tail fiber protein; NCTC11181_05329; phage(gi18249920)2.06e-102Showinfo_outline
7complement(767097..767642)PHAGE_Entero_phiP27_NC_003356: putative tail fiber assembly protein; NCTC11181_05330; phage(gi18249919)4.19e-95Showinfo_outline
8complement(767645..768733)PHAGE_Entero_phiP27_NC_003356: putative tail fiber protein; NCTC11181_05331; phage(gi18249918)4.79e-62Showinfo_outline
9complement(768733..769413)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC11181_05332; phage(gi966201443)7.78e-137Showinfo_outline
10complement(769410..770609)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC11181_05333; phage(gi966201442)0.0Showinfo_outline
11complement(770609..770962)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC11181_05334; phage(gi966201441)7.82e-64Showinfo_outline
12complement(770962..771714)PHAGE_Salmon_SEN34_NC_028699: baseplate assembly protein; NCTC11181_05335; phage(gi966201439)1.73e-84Showinfo_outline
13complement(771823..772164)Uncharacterised protein; NCTC11181_053360.0Showinfo_outline
14complement(772435..773475)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC11181_05337; phage(gi966201436)5.91e-106Showinfo_outline
15complement(773478..773780)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC11181_05338; phage(gi966201435)7.87e-34Showinfo_outline
16complement(773784..774434)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC11181_05339; phage(gi966201434)9.79e-86Showinfo_outline
17complement(774434..776386)PHAGE_Salmon_SEN34_NC_028699: tail tape measure protein; NCTC11181_05340; phage(gi966201433)0.0Showinfo_outline
18complement(776564..777016)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC11181_05341; phage(gi966201432)4.95e-75Showinfo_outline
19complement(777020..777460)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC11181_05342; phage(gi966201431)4.62e-72Showinfo_outline
20complement(777471..778616)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC11181_05343; phage(gi966201430)6.52e-179Showinfo_outline
21complement(778620..779183)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC11181_05344; phage(gi966201429)9.93e-99Showinfo_outline
22complement(779158..779547)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC11181_05345; phage(gi966201428)1.72e-86Showinfo_outline
23complement(779534..780088)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC11181_05346; phage(gi966201427)2.10e-107Showinfo_outline
24complement(780085..780492)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC11181_05347; phage(gi966201426)2.86e-90Showinfo_outline
25complement(780458..780679)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC11181_05348; phage(gi966201425)9.34e-18Showinfo_outline
26complement(780721..781662)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC11181_05349; phage(gi966201424)0.0Showinfo_outline
27complement(781674..782180)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC11181_05350; phage(gi966201423)1.12e-89Showinfo_outline
28complement(782184..783404)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC11181_05351; phage(gi966201422)0.0Showinfo_outline
29complement(783408..783866)PHAGE_Salmon_SEN34_NC_028699: putative head morphogenesis protein; NCTC11181_05352; phage(gi966201421)8.32e-86Showinfo_outline
30complement(784042..785508)PHAGE_Salmon_SEN34_NC_028699: putative portal protein; NCTC11181_05353; phage(gi966201420)0.0Showinfo_outline
31complement(785508..786911)PHAGE_Edward_GF_2_NC_026611: putative terminase large subunit; NCTC11181_05354; phage(gi764162249)0.0Showinfo_outline
32complement(786862..787626)PHAGE_Escher_P13374_NC_018846: phage terminase small subunit; NCTC11181_05355; phage(gi410491651)4.80e-17Showinfo_outline
33787824..788333DedA family integral membrane protein; NCTC11181_053560.0Showinfo_outline
34complement(788422..788892)PHAGE_Salmon_HK620_NC_002730: endopeptidase; NCTC11181_05357; phage(gi13559860)6.61e-101Showinfo_outline
35complement(788889..789386)PHAGE_Stx2_c_1717_NC_011357: phage-related lysozyme; NCTC11181_05358; phage(gi209447172)4.80e-118Showinfo_outline
36complement(789386..789592)PHAGE_Entero_VT2phi_272_NC_028656: holin; NCTC11181_05359; phage(gi966197762)1.61e-35Showinfo_outline
37complement(790281..790355)tRNA0.0Showinfo_outline
38complement(790359..790434)tRNA0.0Showinfo_outline
39complement(790437..790513)tRNA0.0Showinfo_outline
40complement(790515..790591)tRNA0.0Showinfo_outline
41complement(790781..791335)PHAGE_Salmon_118970_sal4_NC_030919: hypothetical protein; NCTC11181_05364; phage(gi100037)6.77e-07Showinfo_outline
42complement(791332..791622)PHAGE_Erwini_phiEt88_NC_015295: hypothetical protein; NCTC11181_05365; phage(gi327198620)4.07e-40Showinfo_outline
43complement(791622..792221)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC11181_05366; phage(gi966201473)2.99e-67Showinfo_outline
44complement(792260..792547)putative prophage protein; NCTC11181_053670.0Showinfo_outline
45complement(793180..793845)putative prophage protein; NCTC11181_053690.0Showinfo_outline
46complement(794014..794370)PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; NCTC11181_05370; phage(gi100050)1.65e-11Showinfo_outline
47complement(794428..794850)PHAGE_Shigel_Stx_NC_029120: LygF; NCTC11181_05371; phage(gi985761265)2.81e-67Showinfo_outline
48complement(794865..795611)PHAGE_Shigel_Stx_NC_029120: DNA replication protein; NCTC11181_05372; phage(gi985761263)2.72e-149Showinfo_outline
49complement(795618..796406)PHAGE_Escher_TL_2011b_NC_019445: hypothetical protein; NCTC11181_05373; phage(gi418487646)1.17e-53Showinfo_outline
50complement(796484..796906)PHAGE_Entero_mEp237_NC_019704: CII protein; NCTC11181_05374; phage(gi435439306)1.03e-09Showinfo_outline
51complement(796890..797117)PHAGE_Pectob_ZF40_NC_019522: putative cro anti-repressor; NCTC11181_05375; phage(gi422936651)9.89e-13Showinfo_outline
52797194..797601PHAGE_Cronob_phiES15_NC_018454: putative transcriptional repressor DicA; NCTC11181_05376; phage(gi401817574)5.09e-39Showinfo_outline
53797804..797959PHAGE_Salico_CGphi29_NC_020844: hypothetical protein; NCTC11181_05377; phage(gi472340166)4.69e-12Showinfo_outline
54797961..798089putative prophage protein; NCTC11181_053780.0Showinfo_outline
55798119..798337putative prophage protein; NCTC11181_053790.0Showinfo_outline
56complement(798456..798923)PHAGE_Salmon_HK620_NC_002730: hypothetical protein; NCTC11181_05380; phage(gi13559839)3.27e-12Showinfo_outline
57799688..799921Phd_YefM; NCTC11181_053820.0Showinfo_outline
58799930..800250Plasmid stabilisation system protein; NCTC11181_053830.0Showinfo_outline
59800570..801124PHAGE_Escher_phi191_NC_028660: Rha family regulatory protein; NCTC11181_05385; phage(gi966198045)1.55e-53Showinfo_outline
60801141..801422PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; zinc-binding; phage protein; NCTC11181_05386(gi169257260)4.40e-08Showinfo_outline
61801497..801793PHAGE_Entero_HK225_NC_019717: hypothetical protein; NCTC11181_05387; phage(gi428782411)6.17e-15Showinfo_outline
62801817..803415PHAGE_Shigel_Stx_NC_029120: exodeoxyribonuclease VIII; NCTC11181_05388; phage(gi985761253)0.0Showinfo_outline
63complement(803412..804602)PHAGE_Shigel_SfII_NC_021857: transposase; NCTC11181_05389; phage(gi526244660)1.18e-138Showinfo_outline
64804741..805061PHAGE_Shigel_Stx_NC_029120: exodeoxyribonuclease VIII; NCTC11181_05390; phage(gi985761253)2.60e-20Showinfo_outline
65805039..805335PHAGE_Entero_Min27_NC_010237: host-nuclease inhibitor protein Gam; NCTC11181_05391; phage(gi170783625)4.12e-54Showinfo_outline
66805341..806432PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; NCTC11181_05392; phage(gi401817570)0.0Showinfo_outline
67complement(806582..807214)PHAGE_Shigel_Sf6_NC_005344: putative transposase OrfB; NCTC11181_05393; phage(gi41057343)1.71e-151Showinfo_outline
68complement(807427..807729)PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; NCTC11181_05394; phage(gi24373865)4.65e-10Showinfo_outline
69807981..807993attR0.0Showinfo_outline
70808031..808312excisionase; NCTC11181_053950.0Showinfo_outline
71808278..809354PHAGE_Entero_HK022_NC_002166: integrase; NCTC11181_05396; phage(gi9634144)3.38e-87Showinfo_outline
72809609..810112PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; NCTC11181_05397; phage(gi557307573)2.90e-111Showinfo_outline
73complement(810522..810863)PHAGE_Salmon_SEN1_NC_029003: hypothetical protein; NCTC11181_05400; phage(gi971764937)5.65e-12Showinfo_outline
74complement(810876..811748)putative copper resistance protein; NCTC11181_054010.0Showinfo_outline
75complement(811752..812126)putative copper resistance protein; NCTC11181_054020.0Showinfo_outline
76812265..812495PHAGE_Salmon_SEN34_NC_028699: DNA polymerase III theta subunit; NCTC11181_05403; phage(gi966201468)7.55e-17Showinfo_outline
77812597..813253putative carbon-nitrogen hydrolase; NCTC11181_054040.0Showinfo_outline
78813277..813939PHAGE_Cronob_vB_CsaM_GAP32_NC_019401: putative DNA polymerase III epsilon subunit; NCTC11181_05405; phage(gi414087193)4.79e-20Showinfo_outline
79complement(813936..815996)PROPHAGE_Escher_MG1655: protease II; NCTC11181_05406; phage(gi16129798)0.0Showinfo_outline

Region 4, total 16 CDS

#CDS PositionBLAST HitE-ValueSequence
1827801..829897PROPHAGE_Escher_Sakai: phage transposase; NCTC11181_05419; phage(gi15834199)0.0Showinfo_outline
2829973..830923PHAGE_Entero_Mu_NC_000929: DNA transposition protein; NCTC11181_05420; phage(gi9633513)1.88e-71Showinfo_outline
3830939..831166PHAGE_Entero_Mu_NC_000929: kil; NCTC11181_05421; phage(gi9633497)8.01e-45Showinfo_outline
4831199..831462PHAGE_Entero_Mu_NC_000929: hypothetical protein; NCTC11181_05422; phage(gi9633499)2.94e-52Showinfo_outline
5831477..831896PHAGE_Entero_Mu_NC_000929: hypothetical protein; NCTC11181_05423; phage(gi9633547)1.26e-91Showinfo_outline
6831909..832196PHAGE_Entero_Mu_NC_000929: hypothetical protein; NCTC11181_05424; phage(gi9633546)2.87e-56Showinfo_outline
7832215..832739PHAGE_Entero_Mu_NC_000929: Gam; NCTC11181_05425; phage(gi9633500)3.33e-114Showinfo_outline
8832837..833385PHAGE_Entero_SfMu_NC_027382: hypothetical protein; NCTC11181_05426; phage(gi849255241)9.86e-136Showinfo_outline
9833389..833928PHAGE_Entero_Mu_NC_000929: hypothetical protein; NCTC11181_05427; phage(gi9633501)1.78e-95Showinfo_outline
10833921..834067Uncharacterised protein; NCTC11181_054280.0Showinfo_outline
11834097..834411PHAGE_Entero_Mu_NC_000929: hypothetical protein; NCTC11181_05429; phage(gi9633504)2.22e-44Showinfo_outline
12complement(834350..834616)PHAGE_Entero_Mu_NC_000929: hypothetical protein; NCTC11181_05430; phage(gi9633505)7.14e-25Showinfo_outline
13834690..835241PHAGE_Entero_Mu_NC_000929: hypothetical protein; modulation; phage of host gene protein; NCTC11181_05431(gi9633506)1.39e-107Showinfo_outline
14835238..835687PHAGE_Entero_Mu_NC_000929: Mor; NCTC11181_05432; phage(gi9633507)1.66e-54Showinfo_outline
15835773..836360PHAGE_Acinet_LZ35_NC_031117: membrane-associated initiation of head vertex; NCTC11181_05433; phage(gi100034)1.28e-21Showinfo_outline
16836362..836589PHAGE_Entero_Mu_NC_000929: hypothetical protein; NCTC11181_05434; phage(gi9633508)9.71e-29Showinfo_outline
Click on a region to see details.
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)

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Length: 837299 bps
Phages: 4
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Lysis
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Fiber Protein
Plate Protein
tRNA

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