Submission Results

Sequence Name: Not Available

GenBank Accession Number: UGDG01000002.1

GenInfo (GI) Number: 0000000000

Download Results: UGDG01000002.1.PHASTER.zip

gi|00000000|ref|UGDG01000002.1| Escherichia coli strain NCTC9060 genome assembly, contig: 5173590, gc%: 50.68%

Download summary as .txt file: summary.txt file_download

Total: 11 prophage regions have been identified, of which 6 regions are intact, 4 regions are incomplete, and 1 regions are questionable.

RegionRegion LengthCompletenessScore# Total ProteinsRegion PositionMost Common PhageGC %Details
122.6Kbintact15033820-23447 info_outlinePHAGE_Salmon_Fels_2_NC_010463(22)54.94%Show info_outline
251.7Kbintact15066433010-484787 info_outlinePHAGE_Entero_BP_4795_NC_004813(26)52.33%Show info_outline
337.6Kbintact15054573277-610967 info_outlinePHAGE_Entero_Mu_NC_000929(34)54.12%Show info_outline
430.6Kbincomplete5030818458-849081 info_outlinePHAGE_Entero_DE3_NC_042057(7)49.23%Show info_outline
532.4Kbincomplete4017841388-873816 info_outlinePHAGE_Entero_YYZ_2008_NC_011356(2)47.12%Show info_outline
670.6Kbintact110721155040-1225669 info_outlinePHAGE_Entero_DE3_NC_042057(18)51.35%Show info_outline
712.4Kbincomplete10122174656-2187094 info_outlinePHAGE_Escher_RCS47_NC_042128(6)52.35%Show info_outline
819.9Kbincomplete4092420414-2440326 info_outlinePHAGE_Entero_P1_NC_005856(2)48.84%Show info_outline
943Kbintact150654473530-4516560 info_outlinePHAGE_Entero_SfI_NC_027339(35)49.44%Show info_outline
1050.9Kbquestionable80574998540-5049440 info_outlinePHAGE_Entero_lambda_NC_001416(28)49.15%Show info_outline
1138.1Kbintact150545131415-5169598 info_outlinePHAGE_Salmon_Fels_2_NC_010463(35)51.84%Show info_outline
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Region: The number assigned to the region.
Region Length: The length of the sequence of that region (in bp).
Completeness: A prediction of whether the region contains a intact or incomplete prophage based on the above criteria.
Score: The score of the region based on the above criteria.
# Total Proteins: The number of ORFs present in the region.
Region Position: The start and end positions of the region on the bacterial chromosome.
Most Common Phage: The phage(s) with the highest number of proteins most similar to those in the region.
GC %: The percentage of GC nucleotides of the region.

Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:

  1. If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
Method 2:
  1. If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
Method 3:
  1. If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
  2. If the size of the region is greater than 30 Kb, the score will be increased by 10.
  3. If there are at least 40 proteins in the region, the score will be increased by 10.
  4. If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
Compared the total score of method 2 with the total score of method 3, the bigger one is chosen as the total score of the region.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.

gi|00000000|ref|UGDG01000002.1| Escherichia coli strain NCTC9060 genome assembly, contig: 5173590, gc%: 50.68%

Download details as .txt file: detail.txt file_download

Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File

Region 1, total 33 CDS

#CDS PositionBLAST HitE-ValueSequence
1complement(820..1428)PHAGE_Salmon_Fels_2_NC_010463: terminase ATPase subunit; NCTC9060_00117; phage(gi169936048)9.15e-23Showinfo_outline
2complement(1383..1547)Uncharacterised protein; NCTC9060_001180.0Showinfo_outline
3complement(1547..2221)PHAGE_Salmon_Fels_2_NC_010463: terminase ATPase subunit; NCTC9060_00119; phage(gi169936048)2.59e-161Showinfo_outline
4complement(2316..3203)PHAGE_Salmon_Fels_2_NC_010463: terminase ATPase subunit; NCTC9060_00120; phage(gi169936048)0.0Showinfo_outline
53454..4287PHAGE_Salmon_Fels_2_NC_010463: capsid-scaffolding protein; NCTC9060_00121; phage(gi169936047)9.71e-175Showinfo_outline
64303..4584PHAGE_Salmon_Fels_2_NC_010463: capsid protein; NCTC9060_00122; phage(gi169936046)3.41e-44Showinfo_outline
74584..5174PHAGE_Salmon_Fels_2_NC_010463: capsid protein; NCTC9060_00123; phage(gi169936046)1.63e-99Showinfo_outline
85365..5610PHAGE_Salmon_Fels_2_NC_010463: terminase endonuclease subunit; NCTC9060_00124; phage(gi169936045)1.49e-43Showinfo_outline
95618..5797PHAGE_Salmon_Fels_2_NC_010463: terminase endonuclease subunit; NCTC9060_00125; phage(gi169936045)1.95e-24Showinfo_outline
105751..6017PHAGE_Salmon_Fels_2_NC_010463: terminase endonuclease subunit; NCTC9060_00126; phage(gi169936045)1.06e-32Showinfo_outline
116113..6298PHAGE_Salmon_Fels_2_NC_010463: P2 gpL-like protein; NCTC9060_00127; phage(gi169936044)1.30e-25Showinfo_outline
127235..7498PHAGE_Salmon_Fels_2_NC_010463: endolysin; NCTC9060_00128; phage(gi169936041)2.00e-50Showinfo_outline
137500..7877membrane protein; NCTC9060_001290.0Showinfo_outline
147874..8302PHAGE_Salmon_Fels_2_NC_010463: P2 LysB-like protein; NCTC9060_00130; phage(gi169936038)2.97e-64Showinfo_outline
158398..8829PHAGE_Salmon_Fels_2_NC_010463: P2 gpR-like tail completion protein; NCTC9060_00131; phage(gi169936036)1.01e-92Showinfo_outline
168822..9268PHAGE_Salmon_Fels_2_NC_010463: P2 gpS-like tail completion protein; NCTC9060_00132; phage(gi169936035)7.78e-95Showinfo_outline
179337..9915PHAGE_Salmon_Fels_2_NC_010463: P2 gpV-like protein; NCTC9060_00133; phage(gi169936034)7.64e-120Showinfo_outline
189912..10271PHAGE_Salmon_Fels_2_NC_010463: baseplate wedge subunit; NCTC9060_00134; phage(gi169936033)3.71e-68Showinfo_outline
1910258..11166PHAGE_Salmon_Fels_2_NC_010463: baseplate assembly protein; NCTC9060_00135; phage(gi169936032)0.0Showinfo_outline
2011159..11764PHAGE_Salmon_Fels_2_NC_010463: P2 gpI-like baseplate assembly protein; NCTC9060_00136; phage(gi169936031)1.65e-138Showinfo_outline
2111761..13350PHAGE_Salmon_Fels_2_NC_010463: P2 gpH-like protein; NCTC9060_00137; phage(gi169936030)7.38e-143Showinfo_outline
22complement(13285..13788)PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; NCTC9060_00138; phage(gi557307573)4.73e-121Showinfo_outline
2314050..14652PHAGE_Entero_HK106_NC_019768: tail fiber assembly protein; NCTC9060_00139; phage(gi428783304)8.01e-127Showinfo_outline
24complement(14624..15067)PHAGE_Escher_pro483_NC_028943: tail fiber assembly protein; NCTC9060_00140; phage(gi971758532)1.41e-44Showinfo_outline
25complement(15070..15561)PHAGE_Erwini_ENT90_NC_019932: phage tail collar domain protein; NCTC9060_00141; phage(gi431810938)2.72e-09Showinfo_outline
2615592..16158PHAGE_Salmon_Fels_2_NC_010463: DNA-invertase; e14; phage prophage; NCTC9060_00142(gi169936026)1.16e-114Showinfo_outline
2716301..17473PHAGE_Salmon_Fels_2_NC_010463: major tail sheath protein; NCTC9060_00143; phage(gi169936025)0.0Showinfo_outline
2817483..17998PHAGE_Salmon_Fels_2_NC_010463: major tail tube protein; NCTC9060_00144; phage(gi169936024)9.45e-118Showinfo_outline
2918053..18355PHAGE_Salmon_Fels_2_NC_010463: P2 gpE-like tail protein; NCTC9060_00145; phage(gi169936023)8.17e-58Showinfo_outline
3018482..21559PHAGE_Salmon_Fels_2_NC_010463: P2 gpT-like tail protein; NCTC9060_00146; phage(gi169936021)0.0Showinfo_outline
3121556..22041PHAGE_Salmon_Fels_2_NC_010463: P2 gpU-like tail protein; NCTC9060_00147; phage(gi169936020)5.31e-98Showinfo_outline
3222038..23138PHAGE_Salmon_Fels_2_NC_010463: tail protein; NCTC9060_00148; phage(gi169936019)0.0Showinfo_outline
3323229..23447PHAGE_Salmon_Fels_2_NC_010463: P2 gpOgr-like protein (acttivation of late gene expression); NCTC9060_00149; phage(gi169936018)1.22e-27Showinfo_outline

Region 2, total 71 CDS

#CDS PositionBLAST HitE-ValueSequence
1433010..433021attL0.0Showinfo_outline
2complement(433027..434157)PHAGE_Entero_HK022_NC_002166: integrase; NCTC9060_00550; phage(gi9634144)1.04e-67Showinfo_outline
3complement(434448..436919)PHAGE_Salmon_118970_sal3_NC_031940: baseplate hub subunit; NCTC9060_00551; phage(gi100107)1.55e-68Showinfo_outline
4complement(437012..437203)putative prophage protein; NCTC9060_005520.0Showinfo_outline
5complement(437200..437388)cell division inhibition protein; NCTC9060_005530.0Showinfo_outline
6437947..438225Uncharacterised protein; NCTC9060_005550.0Showinfo_outline
7complement(438185..438586)PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; NCTC9060_00556; phage(gi401817573)4.88e-15Showinfo_outline
8complement(438609..438827)putative prophage protein; NCTC9060_005570.0Showinfo_outline
9complement(438857..438985)PHAGE_Entero_vB_EcoP_ACG_C91_NC_019403: hypothetical protein; NCTC9060_00558; phage(gi414087578)2.89e-05Showinfo_outline
10complement(438987..439223)PHAGE_Salico_CGphi29_NC_020844: hypothetical protein; NCTC9060_00559; phage(gi472340166)1.04e-11Showinfo_outline
11complement(439415..440131)PHAGE_Pectob_ZF40_NC_019522: putative cI repressor; NCTC9060_00560; phage(gi422936650)2.00e-64Showinfo_outline
12440181..440396PHAGE_Pectob_ZF40_NC_019522: putative cro anti-repressor; NCTC9060_00561; phage(gi422936651)4.71e-15Showinfo_outline
13440393..440818PHAGE_Pectob_ZF40_NC_019522: putative cII repressor; NCTC9060_00562; phage(gi422936652)2.63e-06Showinfo_outline
14440890..441960PHAGE_Shigel_POCJ13_NC_025434: primosomal protein I; NCTC9060_00563; phage(gi725949717)2.37e-71Showinfo_outline
15442001..442423PHAGE_Shigel_Stx_NC_029120: LygF; NCTC9060_00564; phage(gi985761265)3.95e-66Showinfo_outline
16442481..442837PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; NCTC9060_00565; phage(gi100050)2.81e-11Showinfo_outline
17442888..443100Uncharacterised protein; NCTC9060_005660.0Showinfo_outline
18443353..443616PHAGE_Salmon_FSLSP030_NC_021779: hypothetical protein; NCTC9060_00567; phage(gi525972396)1.97e-41Showinfo_outline
19443627..444496PHAGE_Escher_P13374_NC_018846: hypothetical protein; NCTC9060_00568; phage(gi410491607)2.75e-155Showinfo_outline
20444612..444716Uncharacterised protein; NCTC9060_005690.0Showinfo_outline
21445197..445430PROPHAGE_Escher_MG1655: IS186 transposase; NCTC9060_00571; phage(gi90111427)1.83e-30Showinfo_outline
22445826..446308PROPHAGE_Escher_MG1655: IS186 transposase; NCTC9060_00572; phage(gi90111427)4.65e-111Showinfo_outline
23446331..446471transposase; NCTC9060_005730.0Showinfo_outline
24446914..447969PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; NCTC9060_00574; phage(gi557307571)2.47e-111Showinfo_outline
25447970..448350PHAGE_Shigel_Stx_NC_029120: crossover junction endodeoxyribonuclease rusA; NCTC9060_00575; phage(gi985761276)2.77e-47Showinfo_outline
26448347..449168PHAGE_Entero_HK225_NC_019717: late gene regulator Q; NCTC9060_00576; phage(gi428782441)3.88e-112Showinfo_outline
27449395..449592PHAGE_Entero_phiP27_NC_003356: hypothetical protein; NCTC9060_00577; phage(gi18249887)6.50e-42Showinfo_outline
28449744..450793PHAGE_Entero_phiP27_NC_003356: putative DNA methylase; NCTC9060_00578; phage(gi18249888)0.0Showinfo_outline
29450843..450918tRNA0.0Showinfo_outline
30450926..451002tRNA0.0Showinfo_outline
31451016..451092tRNA0.0Showinfo_outline
32complement(451384..451719)PHAGE_Stx2_c_1717_NC_011357: hypothetical protein; NCTC9060_00583; phage(gi209447168)2.66e-54Showinfo_outline
33451980..453836PHAGE_Entero_YYZ_2008_NC_011356: hypothetical protein; NCTC9060_00584; phage(gi209427766)0.0Showinfo_outline
34453987..454202PHAGE_Shigel_Ss_VASD_NC_028685: holin lysis protein S; NCTC9060_00585; phage(gi966200466)1.22e-45Showinfo_outline
35454207..454551PHAGE_Entero_YYZ_2008_NC_011356: hypothetical protein; NCTC9060_00586; phage(gi209427768)3.44e-46Showinfo_outline
36complement(454517..454789)ybl58; NCTC9060_005870.0Showinfo_outline
37454895..455428PHAGE_Entero_BP_4795_NC_004813: putative R protein; Qin; phage prophage; NCTC9060_00588(gi157166033)4.91e-124Showinfo_outline
38455721..455852PHAGE_Escher_phi191_NC_028660: hypothetical protein; NCTC9060_00589; phage(gi966198023)3.42e-13Showinfo_outline
39456071..456565PHAGE_Escher_TL_2011c_NC_019442: hypothetical protein; NCTC9060_00590; phage(gi418487099)1.54e-94Showinfo_outline
40456562..456786Uncharacterised protein; NCTC9060_005910.0Showinfo_outline
41complement(456985..457185)PHAGE_Entero_YYZ_2008_NC_011356: hypothetical protein; NCTC9060_00592; phage(gi209427772)8.66e-27Showinfo_outline
42457227..457592PHAGE_Entero_YYZ_2008_NC_011356: putative DNAse; NCTC9060_00593; phage(gi209427773)1.93e-66Showinfo_outline
43457883..458446PHAGE_Entero_YYZ_2008_NC_011356: putative phage terminase; NCTC9060_00594; phage(gi209427774)9.74e-118Showinfo_outline
44458443..460104PHAGE_Entero_YYZ_2008_NC_011356: putative phage terminase-like protein large subunit; NCTC9060_00595; phage(gi209427775)0.0Showinfo_outline
45460168..462105PHAGE_Entero_YYZ_2008_NC_011356: putative major head protein/prohead proteinase; NCTC9060_00596; phage(gi209427776)0.0Showinfo_outline
46462150..462371PHAGE_Entero_YYZ_2008_NC_011356: hypothetical protein; NCTC9060_00597; phage(gi209427801)2.85e-48Showinfo_outline
47462317..464902PHAGE_Entero_YYZ_2008_NC_011356: putative portal protein; NCTC9060_00598; phage(gi209427777)0.0Showinfo_outline
48464899..465225PHAGE_Entero_YYZ_2008_NC_011356: hypothetical protein; NCTC9060_00599; phage(gi209427778)1.33e-71Showinfo_outline
49465235..465585PHAGE_Entero_YYZ_2008_NC_011356: putative head-tail adaptor; NCTC9060_00600; phage(gi209427779)2.66e-78Showinfo_outline
50465582..466028PHAGE_Entero_YYZ_2008_NC_011356: hypothetical protein; NCTC9060_00601; phage(gi209427780)2.94e-102Showinfo_outline
51466025..466369PHAGE_Entero_YYZ_2008_NC_011356: putative prophage structural protein; NCTC9060_00602; phage(gi209427781)1.26e-78Showinfo_outline
52466434..467150PHAGE_Entero_YYZ_2008_NC_011356: putative tail protein; NCTC9060_00603; phage(gi209427782)2.41e-173Showinfo_outline
53467165..467539PHAGE_Entero_YYZ_2008_NC_011356: putative tail assembly protein; NCTC9060_00604; phage(gi209427783)1.85e-85Showinfo_outline
54467635..467844PHAGE_Entero_YYZ_2008_NC_011356: hypothetical protein; NCTC9060_00605; phage(gi209427784)5.74e-44Showinfo_outline
55467892..471134PHAGE_Entero_YYZ_2008_NC_011356: putative tail protein; NCTC9060_00606; phage(gi209427785)0.0Showinfo_outline
56471127..471468PHAGE_Entero_YYZ_2008_NC_011356: putative minor tail protein; NCTC9060_00607; phage(gi209427786)1.97e-77Showinfo_outline
57471468..472166PHAGE_Entero_YYZ_2008_NC_011356: putative tail protein; NCTC9060_00608; phage(gi209427787)4.41e-164Showinfo_outline
58472177..472920PHAGE_Entero_YYZ_2008_NC_011356: putative tail component K-like protein; NCTC9060_00609; phage(gi209427789)9.41e-171Showinfo_outline
59472917..473498PHAGE_Entero_YYZ_2008_NC_011356: putative tail assembly protein; NCTC9060_00610; phage(gi209427790)8.23e-132Showinfo_outline
60473739..477212PHAGE_Entero_YYZ_2008_NC_011356: phage-related tail protein; NCTC9060_00611; phage(gi209427791)0.0Showinfo_outline
61477280..477879PHAGE_Entero_YYZ_2008_NC_011356: putative outer membrane protein Lom precursor; NCTC9060_00612; phage(gi209427792)2.29e-131Showinfo_outline
62complement(478528..479262)PHAGE_Entero_lambda_NC_001416: hypothetical protein; NCTC9060_00613; phage(gi9626267)6.09e-16Showinfo_outline
63479504..480592PHAGE_Entero_P88_NC_026014: tail fiber protein; NCTC9060_00614; phage(gi744692739)1.37e-80Showinfo_outline
64complement(480603..480980)PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; NCTC9060_00615; phage(gi557307573)4.00e-87Showinfo_outline
65complement(481025..481300)PHAGE_Entero_P1_NC_005856: InsA; NCTC9060_00616; phage(gi46401643)4.76e-62Showinfo_outline
66complement(481329..481880)PHAGE_Entero_P88_NC_026014: tail fiber protein; NCTC9060_00617; phage(gi744692742)3.51e-52Showinfo_outline
67482053..482142Uncharacterised protein; NCTC9060_006180.0Showinfo_outline
68complement(482489..483145)methylase; NCTC9060_006190.0Showinfo_outline
69483598..483768PHAGE_Entero_phiP27_NC_003356: hypothetical protein; NCTC9060_00621; phage(gi18249921)8.82e-14Showinfo_outline
70complement(483895..484452)PHAGE_Vibrio_VHML_NC_004456: ORF48; NCTC9060_00622; phage(gi27311215)4.46e-38Showinfo_outline
71484787..484798attR0.0Showinfo_outline

Region 3, total 54 CDS

#CDS PositionBLAST HitE-ValueSequence
1complement(573277..574176)PHAGE_Entero_Mu_NC_000929: Mom; NCTC9060_00712; phage(gi9633544)2.40e-132Showinfo_outline
2574425..574718Uncharacterised protein; NCTC9060_007130.0Showinfo_outline
3complement(574886..575140)PHAGE_Escher_TL_2011c_NC_019442: hypothetical protein; NCTC9060_00714; phage(gi418487098)3.66e-09Showinfo_outline
4complement(575176..575358)PHAGE_Shigel_POCJ13_NC_025434: hypothetical protein; NCTC9060_00715; phage(gi725949738)1.87e-17Showinfo_outline
5complement(575503..577557)PHAGE_Entero_BP_4795_NC_004813: hypothetical protein YjhS; NCTC9060_00716; phage(gi157166028)0.0Showinfo_outline
6complement(577643..578215)PHAGE_Entero_Mu_NC_000929: Gin; NCTC9060_00717; phage(gi9633542)2.46e-96Showinfo_outline
7578505..578654PHAGE_Escher_pro147_NC_028896: tail fibers protein; NCTC9060_00718; phage(gi971753729)5.02e-05Showinfo_outline
8578706..579227PROPHAGE_Escher_Sakai: putative tail fiber assembly protein; NCTC9060_00719; phage(gi15834244)1.45e-80Showinfo_outline
9complement(579259..580140)PHAGE_Entero_Mu_NC_000929: tail fiber; NCTC9060_00720; phage(gi9633540)9.71e-44Showinfo_outline
10complement(580140..580700)PHAGE_Entero_Mu_NC_000929: hypothetical protein; NCTC9060_00721; phage(gi9633539)1.39e-56Showinfo_outline
11complement(580691..581773)PHAGE_Entero_Mu_NC_000929: hypothetical protein; NCTC9060_00722; phage(gi9633538)3.37e-124Showinfo_outline
12complement(581773..582210)PHAGE_Entero_Mu_NC_000929: hypothetical protein; NCTC9060_00723; phage(gi9633537)4.74e-51Showinfo_outline
13complement(582203..582814)PHAGE_Entero_Mu_NC_000929: putative baseplate assembly protein; NCTC9060_00724; phage(gi9633536)2.73e-65Showinfo_outline
14complement(582807..583931)PHAGE_Entero_Mu_NC_000929: putative tail protein; NCTC9060_00725; phage(gi9633535)7.89e-119Showinfo_outline
15complement(583915..585273)PHAGE_Entero_Mu_NC_000929: putative DNA circulation protein; NCTC9060_00726; phage(gi9633534)1.19e-70Showinfo_outline
16complement(585260..587317)PHAGE_Entero_Mu_NC_000929: putative tape measure protein; NCTC9060_00727; phage(gi9633533)2.06e-108Showinfo_outline
17complement(587445..587924)PHAGE_Entero_Mu_NC_000929: hypothetical protein; NCTC9060_00728; phage(gi9633532)1.80e-28Showinfo_outline
18complement(587939..588304)PHAGE_Entero_Mu_NC_000929: hypothetical protein; NCTC9060_00729; phage(gi9633531)1.44e-32Showinfo_outline
19complement(588313..589815)PHAGE_Entero_Mu_NC_000929: major tail subunit; NCTC9060_00730; phage(gi9633530)8.20e-162Showinfo_outline
20complement(589815..590102)PHAGE_Entero_Mu_NC_000929: hypothetical protein; NCTC9060_00731; phage(gi9633529)3.44e-12Showinfo_outline
21complement(590106..590669)PHAGE_Entero_Mu_NC_000929: hypothetical protein; NCTC9060_00732; phage(gi9633528)1.60e-44Showinfo_outline
22complement(590666..591085)PHAGE_Entero_Mu_NC_000929: hypothetical protein; NCTC9060_00733; phage(gi9633527)7.86e-34Showinfo_outline
23complement(591082..591441)PHAGE_Entero_Mu_NC_000929: hypothetical protein; NCTC9060_00734; phage(gi9633526)2.01e-05Showinfo_outline
24complement(591485..592432)PHAGE_Entero_Mu_NC_000929: major head subunit; NCTC9060_00735; phage(gi9633525)8.04e-159Showinfo_outline
25complement(592432..593556)PHAGE_Entero_Mu_NC_000929: putative protease protein; NCTC9060_00736; phage(gi9633523)1.22e-93Showinfo_outline
26complement(593734..594207)PHAGE_Entero_Mu_NC_000929: putative virion morphogenesis protein; NCTC9060_00737; phage(gi9633522)1.15e-49Showinfo_outline
27complement(594329..595660)PHAGE_Entero_Mu_NC_000929: virion morphogenesis late F orf; NCTC9060_00738; phage(gi9633521)0.0Showinfo_outline
28complement(595644..597233)PHAGE_Entero_Mu_NC_000929: hypothetical protein; Portal; phage protein; NCTC9060_00739(gi9633520)0.0Showinfo_outline
29complement(597233..598897)PHAGE_Entero_Mu_NC_000929: putative portal protein; NCTC9060_00740; phage(gi9633519)0.0Showinfo_outline
30complement(598897..599145)Uncharacterised protein; NCTC9060_007410.0Showinfo_outline
31complement(599156..599737)PHAGE_Entero_Mu_NC_000929: hypothetical protein; NCTC9060_00742; phage(gi9633518)8.17e-66Showinfo_outline
32complement(599740..600030)PHAGE_Entero_Mu_NC_000929: hypothetical protein; NCTC9060_00743; phage(gi9633517)3.62e-35Showinfo_outline
33complement(600023..600334)PHAGE_Entero_Mu_NC_000929: hypothetical protein; NCTC9060_00744; phage(gi9633516)5.69e-12Showinfo_outline
34complement(600315..600608)PHAGE_Vibrio_12B12_NC_021070: C4-type zinc finger protein; NCTC9060_00745; phage(gi481019174)6.81e-08Showinfo_outline
35complement(600755..601105)PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; NCTC9060_00746; phage(gi100132)5.31e-06Showinfo_outline
36complement(601218..601718)PHAGE_Xantho_CP1_NC_019933: hypothetical protein; NCTC9060_00747; phage(gi431811023)1.35e-33Showinfo_outline
37complement(601790..602212)PHAGE_Entero_Mu_NC_000929: putative transcription regulator; NCTC9060_00748; phage(gi9633511)1.06e-30Showinfo_outline
38complement(602283..602669)PHAGE_Entero_Mu_NC_000929: hypothetical protein; modulation; phage of host gene protein; NCTC9060_00749(gi9633506)1.04e-14Showinfo_outline
39complement(602623..602796)PHAGE_Entero_Mu_NC_000929: hypothetical protein; modulation; phage of host gene protein; NCTC9060_00750(gi9633506)6.00e-13Showinfo_outline
40602861..603271Uncharacterised protein; NCTC9060_007510.0Showinfo_outline
41complement(603233..603541)PHAGE_Entero_SfMu_NC_027382: hypothetical protein; NCTC9060_00752; phage(gi849255244)1.17e-08Showinfo_outline
42complement(603557..603907)Uncharacterised protein; NCTC9060_007530.0Showinfo_outline
43complement(603904..604233)Uncharacterised protein; NCTC9060_007540.0Showinfo_outline
44complement(604230..604778)PHAGE_Mycoba_Thibault_NC_023738: gp103; NCTC9060_00755; phage(gi593780263)4.90e-09Showinfo_outline
45complement(604785..605300)PHAGE_Entero_Mu_NC_000929: hypothetical protein; NCTC9060_00756; phage(gi9633502)3.50e-63Showinfo_outline
46complement(605300..605833)PHAGE_Entero_Mu_NC_000929: hypothetical protein; NCTC9060_00757; phage(gi9633501)1.15e-75Showinfo_outline
47complement(605979..606509)PHAGE_Entero_Mu_NC_000929: Gam; NCTC9060_00758; phage(gi9633500)2.52e-65Showinfo_outline
48complement(606521..606814)Uncharacterised protein; NCTC9060_007590.0Showinfo_outline
49complement(606819..607091)Uncharacterised protein; NCTC9060_007600.0Showinfo_outline
50complement(607088..607369)PHAGE_Burkho_BcepMigl_NC_019917: hypothetical protein; NCTC9060_00761; phage(gi431809888)3.33e-17Showinfo_outline
51complement(607371..607625)Uncharacterised protein; NCTC9060_007620.0Showinfo_outline
52complement(607638..607859)Uncharacterised protein; NCTC9060_007630.0Showinfo_outline
53complement(607862..608794)PHAGE_Entero_Mu_NC_000929: DNA transposition protein; NCTC9060_00764; phage(gi9633513)3.34e-90Showinfo_outline
54complement(608877..610967)PROPHAGE_Escher_Sakai: phage transposase; NCTC9060_00765; phage(gi15834199)0.0Showinfo_outline

Region 4, total 30 CDS

#CDS PositionBLAST HitE-ValueSequence
1818458..819204PHAGE_Prochl_P_TIM68_NC_028955: hypothetical protein; NCTC9060_00945; phage(gi971760361)8.52e-10Showinfo_outline
2819293..819979GntR family transcriptional regulator; NCTC9060_009460.0Showinfo_outline
3820156..820359PHAGE_Salmon_SSU5_NC_018843: putative selenium-binding protein YdfZ; NCTC9060_00947; phage(gi410491512)4.86e-18Showinfo_outline
4complement(820394..821854)putative sugar dehydrogenase; NCTC9060_009480.0Showinfo_outline
5complement(821943..823226)PHAGE_Burkho_phi1026b_NC_005284: gp59; NCTC9060_00949; phage(gi38707949)7.81e-28Showinfo_outline
6824013..824246PHAGE_Salmon_118970_sal3_NC_031940: replication and recombination DNA helicase; NCTC9060_00950; phage(gi100033)1.44e-44Showinfo_outline
7824563..825153PHAGE_Entero_Mu_NC_000929: Gin; NCTC9060_00951; phage(gi9633542)3.18e-29Showinfo_outline
8complement(825826..828900)PROPHAGE_Escher_MG1655: Qin prophage; predicted side tail fibre assembly protein; NCTC9060_00953; phage(gi16129506)0.0Showinfo_outline
9complement(828965..829564)PHAGE_Entero_cdtI_NC_009514: putative Lom-like outer membrane protein; NCTC9060_00954; phage(gi148609401)9.83e-141Showinfo_outline
10complement(829635..833132)PHAGE_Entero_DE3_NC_042057: recombination endonuclease subunit; NCTC9060_00955; phage(gi100054)0.0Showinfo_outline
11complement(833204..834484)PHAGE_Entero_DE3_NC_042057: RegA; NCTC9060_00956; phage(gi100039)0.0Showinfo_outline
12complement(834465..836066)PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9060_00957; phage(gi100038)0.0Showinfo_outline
13complement(836063..836269)PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9060_00958; phage(gi100037)4.55e-43Showinfo_outline
14complement(836266..838191)PHAGE_Entero_DE3_NC_042057: DNA polymerase; NCTC9060_00959; phage(gi100036)0.0Showinfo_outline
15complement(838166..838711)PHAGE_Entero_DE3_NC_042057: RecA-like recombination protein; NCTC9060_00960; phage(gi100035)3.88e-129Showinfo_outline
16839391..839801PHAGE_Entero_DE3_NC_042057: replication and recombination DNA helicase; NCTC9060_00961; phage(gi100033)1.04e-75Showinfo_outline
17complement(839953..840126)GnsA/GnsB family transcriptional regulator; NCTC9060_009620.0Showinfo_outline
18complement(841375..841872)PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; NCTC9060_00964; phage(gi16765210)1.80e-62Showinfo_outline
19complement(841869..842402)PHAGE_Entero_mEp460_NC_019716: endolysin; NCTC9060_00965; phage(gi428782372)1.35e-121Showinfo_outline
20complement(842399..842710)PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC9060_00966; phage(gi428782371)5.21e-40Showinfo_outline
21complement(842715..842921)PHAGE_Entero_mEp460_NC_019716: porin; NCTC9060_00967; phage(gi428782370)2.64e-40Showinfo_outline
22842963..843082Uncharacterised protein; NCTC9060_009680.0Showinfo_outline
23844199..844411cold shock-like protein CspF; NCTC9060_009700.0Showinfo_outline
24complement(844833..845585)PHAGE_Entero_SfV_NC_003444: antitermination protein Q; NCTC9060_00971; phage(gi19549033)3.43e-178Showinfo_outline
25complement(845599..846648)PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC9060_00972; phage(gi428782365)1.20e-139Showinfo_outline
26complement(846995..847246)putative prophage protein; NCTC9060_009730.0Showinfo_outline
27complement(847463..847618)PHAGE_Entero_933W_NC_000924: host killer protein; NCTC9060_00974; phage(gi9632541)1.17e-25Showinfo_outline
28complement(847690..847977)toxin of the RelE-RelB toxin-antitoxin system; NCTC9060_009750.0Showinfo_outline
29complement(847977..848216)antitoxin of the RelE-RelB toxin-antitoxin system and transcriptional repressor of relBEF; NCTC9060_009760.0Showinfo_outline
30848749..849081Qin prophage protein; NCTC9060_009770.0Showinfo_outline

Region 5, total 19 CDS

#CDS PositionBLAST HitE-ValueSequence
1841388..841403attL0.0Showinfo_outline
2complement(852498..852854)PHAGE_Pectob_ZF40_NC_019522: putative methylase; NCTC9060_00981; phage(gi422936660)2.67e-49Showinfo_outline
3complement(852851..853273)PHAGE_Shigel_Stx_NC_029120: LygF; NCTC9060_00982; phage(gi985761265)6.03e-62Showinfo_outline
4complement(853314..854279)PHAGE_Shigel_SfIV_NC_022749: replication protein; NCTC9060_00983; phage(gi557307567)4.06e-69Showinfo_outline
5complement(854260..854781)YdfX; NCTC9060_009840.0Showinfo_outline
6complement(854765..854995)PHAGE_Pectob_ZF40_NC_019522: putative cro anti-repressor; NCTC9060_00985; phage(gi422936651)9.10e-12Showinfo_outline
7855079..855486PHAGE_Cronob_phiES15_NC_018454: putative transcriptional repressor DicA; NCTC9060_00986; phage(gi401817574)8.91e-41Showinfo_outline
8855653..855808PHAGE_Salico_CGphi29_NC_020844: hypothetical protein; NCTC9060_00987; phage(gi472340166)5.92e-12Showinfo_outline
9855810..855938PHAGE_Entero_vB_EcoP_ACG_C91_NC_019403: hypothetical protein; NCTC9060_00988; phage(gi414087578)9.88e-05Showinfo_outline
10855968..856186putative prophage protein; NCTC9060_009890.0Showinfo_outline
11complement(856190..856354)Uncharacterised protein; NCTC9060_009900.0Showinfo_outline
12856754..856942division inhibition protein; NCTC9060_009920.0Showinfo_outline
13856939..857130putative prophage protein; NCTC9060_009930.0Showinfo_outline
14857223..859694PHAGE_Salmon_118970_sal3_NC_031940: baseplate hub subunit; NCTC9060_00994; phage(gi100107)3.30e-69Showinfo_outline
15859782..860018PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage excisionase; NCTC9060_00995; phage(gi169257269)1.10e-20Showinfo_outline
16860053..861333PHAGE_Entero_YYZ_2008_NC_011356: putative integrase; Qin; phage prophage; NCTC9060_00996(gi209427727)0.0Showinfo_outline
17complement(861353..861463)protein, truncated; NCTC9060_009970.0Showinfo_outline
18complement(861521..862540)PHAGE_Synech_S_SM2_NC_015279: zinc-containing alcohol dehydrogenase superfamily protein; NCTC9060_00998; phage(gi326781942)5.77e-18Showinfo_outline
19873816..873831attR0.0Showinfo_outline

Region 6, total 77 CDS

#CDS PositionBLAST HitE-ValueSequence
11155040..1155055attL0.0Showinfo_outline
21162577..1162825PHAGE_Entero_mEp460_NC_019716: DinI-like protein; NCTC9060_01302; phage(gi428782337)3.39e-53Showinfo_outline
3complement(1162965..1163342)PHAGE_Pseudo_Lu11_NC_017972: putative tail assembly protein; NCTC9060_01303; phage(gi388684690)1.63e-19Showinfo_outline
4complement(1163311..1163940)PHAGE_Escher_Av_05_NC_025830: tail fiber protein; NCTC9060_01304; phage(gi730985066)1.56e-24Showinfo_outline
5complement(1163940..1165451)PHAGE_Entero_BP_4795_NC_004813: putative tail fiber protein; NCTC9060_01305; phage(gi157166060)1.97e-98Showinfo_outline
6complement(1165516..1166115)PHAGE_Entero_cdtI_NC_009514: putative Lom-like outer membrane protein; NCTC9060_01306; phage(gi148609401)2.44e-124Showinfo_outline
7complement(1166183..1169578)PHAGE_Entero_DE3_NC_042057: recombination endonuclease subunit; NCTC9060_01307; phage(gi100054)0.0Showinfo_outline
8complement(1169645..1169899)Uncharacterised protein; NCTC9060_013080.0Showinfo_outline
9complement(1170057..1170599)PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9060_01309; phage(gi100053)1.03e-95Showinfo_outline
10complement(1170596..1171339)PHAGE_Entero_mEp460_NC_019716: tail fiber component; NCTC9060_01310; phage(gi428782332)4.50e-177Showinfo_outline
11complement(1171344..1172042)PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9060_01311; phage(gi100051)2.56e-169Showinfo_outline
12complement(1172042..1172371)PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9060_01312; phage(gi100050)8.02e-68Showinfo_outline
13complement(1172368..1174929)PHAGE_Entero_DE3_NC_042057: RNA polymerase sigma factor; NCTC9060_01313; phage(gi100049)0.0Showinfo_outline
14complement(1174910..1175323)PHAGE_Entero_DE3_NC_042057: rnaseH; NCTC9060_01314; phage(gi100048)1.10e-58Showinfo_outline
15complement(1175350..1175781)PHAGE_Entero_DE3_NC_042057: dsDNA binding protein; NCTC9060_01315; phage(gi100047)3.22e-60Showinfo_outline
16complement(1175795..1176547)PHAGE_Entero_DE3_NC_042057: late promoter transcription; NCTC9060_01316; phage(gi100046)1.95e-139Showinfo_outline
17complement(1176555..1176950)PHAGE_Entero_DE3_NC_042057: loader of DNA helicase; NCTC9060_01317; phage(gi100045)2.21e-73Showinfo_outline
18complement(1176947..1177522)PHAGE_Entero_DE3_NC_042057: ssDNA binding protein; NCTC9060_01318; phage(gi100044)1.16e-66Showinfo_outline
19complement(1177537..1177890)PHAGE_Entero_DE3_NC_042057: RNA polymerase binding protein; NCTC9060_01319; phage(gi100043)2.09e-53Showinfo_outline
20complement(1177883..1178266)PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage accessory DNA packaging protein; Lambda FI homolog; NCTC9060_01320; phage(gi169257229)3.27e-08Showinfo_outline
21complement(1178318..1179346)PHAGE_Entero_DE3_NC_042057: clamp-loader subunit; NCTC9060_01321; phage(gi100041)2.47e-148Showinfo_outline
22complement(1179404..1179751)PHAGE_Entero_DE3_NC_042057: clamp-loader subunit; NCTC9060_01322; phage(gi100040)8.32e-28Showinfo_outline
23complement(1179788..1181293)PHAGE_Entero_DE3_NC_042057: RegA; NCTC9060_01323; phage(gi100039)9.43e-134Showinfo_outline
24complement(1181283..1182875)PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9060_01324; phage(gi100038)0.0Showinfo_outline
25complement(1182872..1183078)PHAGE_Entero_HK225_NC_019717: head-tail connector gpW; NCTC9060_01325; phage(gi428782379)1.09e-17Showinfo_outline
26complement(1183062..1184990)PHAGE_Entero_DE3_NC_042057: DNA polymerase; terminase; phage large subunit; NCTC9060_01326(gi100036)0.0Showinfo_outline
27complement(1184962..1185510)PHAGE_Entero_DE3_NC_042057: RecA-like recombination protein; NCTC9060_01327; phage(gi100035)3.01e-65Showinfo_outline
28complement(1186216..1186356)Uncharacterised protein; NCTC9060_013280.0Showinfo_outline
29complement(1186707..1187165)PHAGE_Entero_BP_4795_NC_004813: putative endopeptidase Rz; NCTC9060_01329; phage(gi157166036)4.87e-89Showinfo_outline
30complement(1187177..1187308)PHAGE_Escher_phi191_NC_028660: hypothetical protein; NCTC9060_01330; phage(gi966198023)1.22e-14Showinfo_outline
31complement(1187323..1187469)Uncharacterised protein; NCTC9060_013310.0Showinfo_outline
32complement(1187662..1188195)PHAGE_Entero_BP_4795_NC_004813: putative R protein; Qin; phage prophage; NCTC9060_01332(gi157166033)7.40e-125Showinfo_outline
331188321..1188596Uncharacterised protein; NCTC9060_013330.0Showinfo_outline
34complement(1188529..1189059)PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; NCTC9060_01334; phage(gi157166032)2.71e-75Showinfo_outline
35complement(1189064..1189279)PHAGE_Shigel_Ss_VASD_NC_028685: holin lysis protein S; NCTC9060_01335; phage(gi966200466)1.22e-45Showinfo_outline
36complement(1189430..1191283)PHAGE_Entero_YYZ_2008_NC_011356: hypothetical protein; NCTC9060_01336; phage(gi209427766)0.0Showinfo_outline
37complement(1191773..1191849)tRNA0.0Showinfo_outline
38complement(1191863..1191939)tRNA0.0Showinfo_outline
39complement(1191947..1192022)tRNA0.0Showinfo_outline
40complement(1192072..1193121)PHAGE_Entero_phiP27_NC_003356: putative DNA methylase; NCTC9060_01341; phage(gi18249888)0.0Showinfo_outline
41complement(1193273..1193470)PHAGE_Entero_phiP27_NC_003356: hypothetical protein; NCTC9060_01342; phage(gi18249887)6.50e-42Showinfo_outline
42complement(1193704..1194321)Uncharacterised protein; NCTC9060_013430.0Showinfo_outline
43complement(1194388..1194780)PHAGE_Entero_phiP27_NC_003356: putative antitermination protein Q; NCTC9060_01344; phage(gi18249885)4.93e-49Showinfo_outline
44complement(1194798..1195787)PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC9060_01345; phage(gi428782365)0.0Showinfo_outline
45complement(1195839..1196096)PHAGE_Entero_phiP27_NC_003356: hypothetical protein; NCTC9060_01346; phage(gi18249884)4.92e-31Showinfo_outline
46complement(1196093..1197493)PHAGE_Entero_phiP27_NC_003356: putative helicase; NCTC9060_01347; phage(gi18249883)0.0Showinfo_outline
47complement(1197490..1198389)PHAGE_Entero_phiP27_NC_003356: putative replication protein DnaC; NCTC9060_01348; phage(gi18249882)8.25e-179Showinfo_outline
48complement(1198400..1199386)PHAGE_Entero_phiP27_NC_003356: hypothetical protein; NCTC9060_01349; phage(gi18249881)5.43e-84Showinfo_outline
49complement(1199383..1199682)transcriptional regulator; NCTC9060_013500.0Showinfo_outline
50complement(1199679..1199903)PHAGE_Entero_cdtI_NC_009514: hypothetical protein; NCTC9060_01351; phage(gi148609427)3.22e-22Showinfo_outline
51complement(1199900..1200094)Uncharacterised protein; NCTC9060_013520.0Showinfo_outline
52complement(1201048..1201755)PHAGE_Entero_phiP27_NC_003356: hypothetical protein; NCTC9060_01355; phage(gi18249878)2.07e-144Showinfo_outline
531202176..1202865PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; NCTC9060_01356; phage(gi100116)1.35e-42Showinfo_outline
541203012..1203560PHAGE_Propio_B22_NC_041891: hypothetical protein; NCTC9060_01357; phage(gi100031)2.60e-05Showinfo_outline
55complement(1203448..1203708)Uncharacterised protein; NCTC9060_013580.0Showinfo_outline
561203848..1204054PHAGE_Entero_phiP27_NC_003356: hypothetical protein; NCTC9060_01359; phage(gi18249872)1.17e-41Showinfo_outline
571204249..1204437PHAGE_Entero_phiP27_NC_003356: hypothetical protein; NCTC9060_01360; phage(gi18249871)2.90e-16Showinfo_outline
581204443..1205024PHAGE_Entero_phiP27_NC_003356: hypothetical protein; NCTC9060_01361; phage(gi18249870)1.29e-89Showinfo_outline
591205035..1205283PHAGE_Entero_P88_NC_026014: MarR family transcriptional regulator; NCTC9060_01362; phage(gi744692709)1.14e-15Showinfo_outline
601205273..1205590PHAGE_Entero_VT2_Sakai_NC_000902: hypothetical protein; NCTC9060_01363; phage(gi9633474)3.42e-53Showinfo_outline
611205544..1205858PHAGE_Salmon_II_E1_NC_010495: hypothetical protein; NCTC9060_01364; phage(gi170676326)2.26e-54Showinfo_outline
621205845..1206030PHAGE_Entero_HK106_NC_019768: hypothetical protein; similarities; phage with EA22 from lambda (modular protein involved in blocking host replication); NCTC9060_01365(gi428783311)2.30e-07Showinfo_outline
631206027..1206533PHAGE_Escher_Av_05_NC_025830: hypothetical protein; NCTC9060_01366; phage(gi730985108)9.45e-34Showinfo_outline
641206530..1207015PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9060_01367; phage(gi100008)1.63e-21Showinfo_outline
651207017..1207532PHAGE_Shigel_Ss_VASD_NC_028685: hypothetical protein; NCTC9060_01368; phage(gi966200434)4.08e-124Showinfo_outline
661207529..1207936PHAGE_Escher_P13374_NC_018846: hypothetical protein; NCTC9060_01369; phage(gi410491607)4.76e-55Showinfo_outline
671207938..1208201PHAGE_Salmon_FSLSP030_NC_021779: hypothetical protein; NCTC9060_01370; phage(gi525972396)3.05e-41Showinfo_outline
681208212..1208379PHAGE_Salmon_118970_sal3_NC_031940: ssDNA binding protein; NCTC9060_01371; phage(gi100044)1.52e-21Showinfo_outline
691208376..1208720PHAGE_Entero_N15_NC_001901: gp45; NCTC9060_01372; phage(gi9630511)2.18e-13Showinfo_outline
701208805..1209047PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; NCTC9060_01373; phage(gi157165989)1.53e-45Showinfo_outline
711209051..1209197PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; NCTC9060_01374; phage(gi157165988)3.06e-23Showinfo_outline
721209206..1209442PHAGE_Entero_phiP27_NC_003356: putative excisionase; NCTC9060_01375; phage(gi18249866)5.92e-52Showinfo_outline
731209498..1210811PHAGE_Entero_phiP27_NC_003356: putative integrase; NCTC9060_01376; phage(gi18249865)0.0Showinfo_outline
741210838..1211563conserved protein, UPF0759 family; NCTC9060_013770.0Showinfo_outline
751211616..1212011inner membrane protein; NCTC9060_013780.0Showinfo_outline
761212052..1212795PHAGE_Pseudo_SM1_NC_041877: hypothetical protein; NCTC9060_01379; phage(gi100053)2.29e-13Showinfo_outline
771225669..1225684attR0.0Showinfo_outline

Region 7, total 12 CDS

#CDS PositionBLAST HitE-ValueSequence
12174656..2177217PHAGE_Bacter_B124_14_NC_016770: putative mismatch repair protein; NCTC9060_02282; phage(gi374671664)2.06e-12Showinfo_outline
22177323..2177979PHAGE_Escher_RCS47_NC_042128: hypothetical protein; NCTC9060_02283; phage(gi100100)2.91e-61Showinfo_outline
3complement(2178030..2178797)PHAGE_Escher_RCS47_NC_042128: DNA helicase; NCTC9060_02284; phage(gi100021)6.97e-95Showinfo_outline
42178993..2179901PHAGE_Escher_RCS47_NC_042128: hypothetical protein; NCTC9060_02285; phage(gi100020)1.19e-146Showinfo_outline
52179898..2181160PHAGE_Escher_RCS47_NC_042128: hypothetical protein; NCTC9060_02286; phage(gi100019)2.92e-169Showinfo_outline
62181157..2181795PHAGE_Escher_RCS47_NC_042128: exonuclease A; NCTC9060_02287; phage(gi100018)8.47e-109Showinfo_outline
72181800..2182576hydroxypyruvate isomerase; NCTC9060_022880.0Showinfo_outline
82182665..2184029inner membrane permease YgbN; NCTC9060_022890.0Showinfo_outline
9complement(2184123..2185115)PHAGE_Synech_S_CBS3_NC_015465: group 2 RNA polymerase sigma factor; NCTC9060_02290; phage(gi331028036)5.87e-41Showinfo_outline
10complement(2185397..2185774)PHAGE_Escher_RCS47_NC_042128: hypothetical protein; NCTC9060_02291; phage(gi100131)1.20e-88Showinfo_outline
11complement(2185819..2186094)PHAGE_Escher_RCS47_NC_042128: hypothetical protein; NCTC9060_02292; phage(gi100131)8.78e-57Showinfo_outline
12complement(2186123..2187094)PHAGE_Strept_Aaronocolus_NC_042051: hypothetical protein; NCTC9060_02293; phage(gi100027)1.14e-05Showinfo_outline

Region 8, total 11 CDS

#CDS PositionBLAST HitE-ValueSequence
12420414..2420749PROPHAGE_Shigel_301: putative P4-type integrase; NCTC9060_02528; phage(gi24114228)4.22e-74Showinfo_outline
22420756..2420767attL0.0Showinfo_outline
32420927..2421676PROPHAGE_Shigel_301: putative P4-type integrase; NCTC9060_02529; phage(gi24114228)0.0Showinfo_outline
42422089..2422364PHAGE_Entero_P1_NC_005856: InsA; NCTC9060_02530; phage(gi46401643)4.76e-62Showinfo_outline
52422409..2422786PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; NCTC9060_02531; phage(gi557307573)3.40e-86Showinfo_outline
62422927..2423190Uncharacterised protein; NCTC9060_025320.0Showinfo_outline
7complement(2423656..2424249)putative type VI secretion protein; NCTC9060_025340.0Showinfo_outline
82424660..2427509PHAGE_Gordon_Orchid_NC_030915: hypothetical protein; NCTC9060_02536; phage(gi100057)1.23e-16Showinfo_outline
92427535..2428515PHAGE_Acidia_virus_NC_029316: AAA+ ATPase; NCTC9060_02537; phage(gi1002166819)5.70e-18Showinfo_outline
102428525..2430912PHAGE_Bacill_vB_BanS_Tsamsa_NC_023007: hypothetical protein; NCTC9060_02538; phage(gi564292591)6.08e-08Showinfo_outline
112440326..2440337attR0.0Showinfo_outline

Region 9, total 69 CDS

#CDS PositionBLAST HitE-ValueSequence
14473530..4473550attL0.0Showinfo_outline
2complement(4473563..4474726)PHAGE_Entero_SfI_NC_027339: phage integrase family site-specific recombinase; NCTC9060_04528; phage(gi849250251)0.0Showinfo_outline
3complement(4474925..4475203)PHAGE_Entero_SfI_NC_027339: hypothetical protein; NCTC9060_04529; phage(gi849250253)1.41e-62Showinfo_outline
4complement(4475251..4475469)PHAGE_Entero_SfI_NC_027339: hypothetical protein; NCTC9060_04530; phage(gi849250254)7.18e-45Showinfo_outline
5complement(4475568..4475783)PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; NCTC9060_04531; phage(gi157165994)1.54e-47Showinfo_outline
6complement(4475860..4476051)PHAGE_Escher_PA28_NC_041935: exonuclease A; NCTC9060_04532; phage(gi100018)8.49e-38Showinfo_outline
7complement(4476024..4476206)PHAGE_Entero_VT2_Sakai_NC_000902: hypothetical protein; NCTC9060_04533; phage(gi9633408)4.74e-39Showinfo_outline
8complement(4476203..4476883)PHAGE_Entero_SfI_NC_027339: putative exonuclease; NCTC9060_04534; phage(gi849250258)5.99e-170Showinfo_outline
9complement(4476880..4477665)PHAGE_Entero_SfI_NC_027339: phage recombination protein Bet; NCTC9060_04535; phage(gi849250259)0.0Showinfo_outline
10complement(4477671..4477967)PHAGE_Entero_933W_NC_000924: host-nuclease inhibitor protein Gam; NCTC9060_04536; phage(gi9632481)2.05e-65Showinfo_outline
11complement(4478042..4478185)PHAGE_Entero_SfI_NC_027339: host-killing protein; NCTC9060_04537; phage(gi849250261)9.27e-28Showinfo_outline
12complement(4478391..4478759)PHAGE_Entero_SfI_NC_027339: putative single-stranded DNA binding protein; NCTC9060_04539; phage(gi849250263)1.27e-85Showinfo_outline
13complement(4478963..4479142)PHAGE_Entero_SfI_NC_027339: restriction alleviation protein; NCTC9060_04540; phage(gi849250264)1.65e-38Showinfo_outline
144479352..4479891PHAGE_Entero_lambda_NC_001416: Superinfection exclusion protein B; NCTC9060_04541; phage(gi19263394)5.68e-130Showinfo_outline
15complement(4479892..4480215)PHAGE_Entero_lambda_NC_001416: early gene regulator; NCTC9060_04542; phage(gi9626289)3.02e-71Showinfo_outline
16complement(4480648..4481397)PHAGE_Burkho_phi6442_NC_009235: gp47, conserved hypothetical protein; NCTC9060_04543; phage(gi134288670)1.09e-06Showinfo_outline
17complement(4481397..4481954)Uncharacterised protein; NCTC9060_045440.0Showinfo_outline
18complement(4481994..4482707)PHAGE_Entero_SfI_NC_027339: repressor protein cI; NCTC9060_04545; phage(gi849250311)6.77e-171Showinfo_outline
194482808..4483008PHAGE_Entero_SfI_NC_027339: Cro protein; NCTC9060_04546; phage(gi849250269)4.95e-43Showinfo_outline
204483092..4483103attL0.0Showinfo_outline
214483127..4483420PHAGE_Entero_SfI_NC_027339: cII protein; NCTC9060_04547; phage(gi849250270)2.13e-64Showinfo_outline
224483453..4484352PHAGE_Entero_SfI_NC_027339: replication protein O; NCTC9060_04548; phage(gi849250271)0.0Showinfo_outline
234484349..4485050PHAGE_Entero_SfI_NC_027339: replication protein P; NCTC9060_04549; phage(gi849250272)6.22e-167Showinfo_outline
244485047..4485346PHAGE_Entero_SfI_NC_027339: Ren protein; NCTC9060_04550; phage(gi849250273)7.39e-59Showinfo_outline
254485616..4486224PHAGE_Haemop_Aaphi23_NC_004827: hypothetical protein; NCTC9060_04553; phage(gi31544005)8.23e-39Showinfo_outline
264486686..4487042Uncharacterised protein; NCTC9060_045540.0Showinfo_outline
274487230..4487685PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; DNA; phage base-flipping protein; NCTC9060_04555(gi401817579)4.50e-80Showinfo_outline
284487685..4487855PHAGE_Escher_HK639_NC_016158: NinE; NCTC9060_04556; phage(gi356870663)2.09e-20Showinfo_outline
294487848..4488138PHAGE_Entero_mEp237_NC_019704: hypothetical protein; NCTC9060_04557; phage(gi435439317)8.07e-63Showinfo_outline
304488135..4488497PHAGE_Salmon_118970_sal4_NC_030919: membrane-associated initiation of head vertex; NCTC9060_04558; phage(gi100034)1.41e-38Showinfo_outline
314488497..4488634PHAGE_Entero_mEp237_NC_019704: hypothetical protein; small; phage protein; NCTC9060_04559(gi435439319)2.10e-15Showinfo_outline
324488631..4489320PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage antiterminator protein Q; NCTC9060_04560; phage(gi169257244)1.07e-103Showinfo_outline
334489642..4489947PHAGE_Salmon_ST64T_NC_004348: holin protein; NCTC9060_04561; phage(gi24371577)2.22e-47Showinfo_outline
344489934..4490410PHAGE_Entero_SfV_NC_003444: lysin; NCTC9060_04562; phage(gi19549037)7.92e-110Showinfo_outline
354490394..4490786PHAGE_Entero_SfV_NC_003444: putative Rz lytic protein; NCTC9060_04563; phage(gi19549038)1.24e-86Showinfo_outline
36complement(4490968..4491267)Uncharacterised protein; NCTC9060_045640.0Showinfo_outline
374491347..4491697PHAGE_Entero_SfI_NC_027339: HNH endonuclease; NCTC9060_04565; phage(gi849250284)2.09e-78Showinfo_outline
384491823..4492317PHAGE_Entero_SfI_NC_027339: terminase small subunit; NCTC9060_04566; phage(gi849250285)7.67e-116Showinfo_outline
394492314..4494047PHAGE_Entero_SfI_NC_027339: terminase large subunit; NCTC9060_04567; phage(gi849250286)0.0Showinfo_outline
404494059..4494241PHAGE_Entero_SfI_NC_027339: hypothetical protein; NCTC9060_04568; phage(gi849250287)1.87e-33Showinfo_outline
414494241..4495482PHAGE_Entero_SfI_NC_027339: portal protein; NCTC9060_04569; phage(gi849250288)0.0Showinfo_outline
424495460..4496110PHAGE_Entero_SfI_NC_027339: putative phage pro-head protease; NCTC9060_04570; phage(gi849250289)3.79e-156Showinfo_outline
434496125..4497330PHAGE_Entero_SfI_NC_027339: phage major capsid protein; NCTC9060_04571; phage(gi849250290)0.0Showinfo_outline
444497380..4497580PHAGE_Entero_SfI_NC_027339: hypothetical protein; NCTC9060_04572; phage(gi849250291)8.04e-39Showinfo_outline
454497583..4497906PHAGE_Shigel_SfII_NC_021857: head-tail connector protein; NCTC9060_04573; phage(gi526244642)4.93e-71Showinfo_outline
464497903..4498313PHAGE_Entero_SfI_NC_027339: putative phage head-tail adaptor; NCTC9060_04574; phage(gi849250292)2.91e-91Showinfo_outline
474498288..4498794PHAGE_Entero_SfI_NC_027339: hypothetical protein; NCTC9060_04575; phage(gi849250293)1.18e-107Showinfo_outline
484498791..4499351PHAGE_Entero_SfI_NC_027339: hypothetical protein; NCTC9060_04576; phage(gi849250294)2.29e-135Showinfo_outline
494499360..4499530PHAGE_Entero_SfI_NC_027339: hypothetical protein; NCTC9060_04577; phage(gi849250295)1.39e-33Showinfo_outline
504499514..4501010PHAGE_Entero_SfI_NC_027339: tail sheath protein; NCTC9060_04578; phage(gi849250296)0.0Showinfo_outline
514501010..4501366PHAGE_Entero_SfI_NC_027339: hypothetical protein; NCTC9060_04579; phage(gi849250297)1.07e-84Showinfo_outline
524501363..4501686PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; NCTC9060_04580; phage(gi557307538)1.16e-72Showinfo_outline
534501771..4503693PHAGE_Shigel_SfIV_NC_022749: tail tape measure protein; NCTC9060_04581; phage(gi557307539)0.0Showinfo_outline
544503703..4505079PHAGE_Entero_SfI_NC_027339: hypothetical protein; NCTC9060_04582; phage(gi849250300)0.0Showinfo_outline
554505076..4506155PHAGE_Entero_SfI_NC_027339: MuP protein; NCTC9060_04583; phage(gi849250301)0.0Showinfo_outline
564506155..4506703PHAGE_Entero_SfI_NC_027339: tail protein; NCTC9060_04584; phage(gi849250302)2.35e-131Showinfo_outline
574506703..4507128PHAGE_Entero_SfI_NC_027339: putative tail protein; NCTC9060_04585; phage(gi849250303)1.78e-97Showinfo_outline
584507115..4508173PHAGE_Entero_SfI_NC_027339: hypothetical protein; NCTC9060_04586; phage(gi849250304)0.0Showinfo_outline
594508164..4508748PHAGE_Entero_SfI_NC_027339: tail protein; NCTC9060_04587; phage(gi849250305)3.25e-138Showinfo_outline
604508752..4509813PHAGE_Entero_SfI_NC_027339: hypothetical protein; NCTC9060_04588; phage(gi849250306)1.06e-54Showinfo_outline
614509810..4509974Uncharacterised protein; NCTC9060_045890.0Showinfo_outline
62complement(4510333..4511400)PHAGE_Escher_TL_2011b_NC_019445: hypothetical protein; NCTC9060_04590; phage(gi418487678)1.38e-09Showinfo_outline
634511929..4512204PHAGE_Entero_P1_NC_005856: InsA; NCTC9060_04591; phage(gi46401643)4.76e-62Showinfo_outline
644512249..4512626PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; NCTC9060_04592; phage(gi557307573)4.00e-87Showinfo_outline
654512813..4514309PHAGE_Entero_phi92_NC_023693: Phi92_gp134; NCTC9060_04593; phage(gi726647068)5.21e-29Showinfo_outline
664514344..4515057PHAGE_Entero_phi92_NC_023693: Phi92_gp135; NCTC9060_04594; phage(gi726647069)1.63e-85Showinfo_outline
67complement(4515139..4516473)PROPHAGE_Escher_Sakai: putative integrase; NCTC9060_04595; phage(gi15834496)1.79e-11Showinfo_outline
684516499..4516510attR0.0Showinfo_outline
694516560..4516580attR0.0Showinfo_outline

Region 10, total 59 CDS

#CDS PositionBLAST HitE-ValueSequence
14998540..4998554attL0.0Showinfo_outline
2complement(4998628..4999698)PHAGE_Entero_HK106_NC_019768: integrase; NCTC9060_05048; phage(gi428783305)0.0Showinfo_outline
3complement(4999980..5000258)PHAGE_Entero_SfI_NC_027339: hypothetical protein; NCTC9060_05049; phage(gi849250253)1.41e-62Showinfo_outline
4complement(5000305..5000523)PHAGE_Escher_PA28_NC_041935: hypothetical protein; NCTC9060_05050; phage(gi100016)1.68e-40Showinfo_outline
5complement(5000622..5000837)PHAGE_Escher_PA28_NC_041935: hypothetical protein; NCTC9060_05051; phage(gi100017)7.26e-47Showinfo_outline
6complement(5000914..5001105)PHAGE_Escher_PA28_NC_041935: exonuclease A; NCTC9060_05052; phage(gi100018)7.36e-39Showinfo_outline
7complement(5001078..5001260)PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9060_05053; phage(gi100011)7.37e-37Showinfo_outline
8complement(5001257..5001937)PHAGE_Escher_PA28_NC_041935: hypothetical protein; NCTC9060_05054; phage(gi100019)2.18e-169Showinfo_outline
9complement(5001934..5002719)PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9060_05055; phage(gi100013)0.0Showinfo_outline
10complement(5002725..5003021)PHAGE_Escher_PA28_NC_041935: DNA helicase; NCTC9060_05056; phage(gi100021)4.29e-67Showinfo_outline
11complement(5003097..5003303)PHAGE_Entero_HK225_NC_019717: Kil protein; NCTC9060_05057; phage(gi428782413)9.87e-36Showinfo_outline
12complement(5003792..5004295)Uncharacterised protein; NCTC9060_050580.0Showinfo_outline
13complement(5004292..5004879)HTH-type transcriptional regulator ygiT; NCTC9060_050590.0Showinfo_outline
14complement(5004904..5005314)Uncharacterised protein; NCTC9060_050600.0Showinfo_outline
15complement(5005434..5005919)PHAGE_Salmon_BTP1_NC_042346: RegA; NCTC9060_05061; phage(gi100039)4.67e-96Showinfo_outline
165006237..5006464PHAGE_Salmon_BTP1_NC_042346: clamp-loader subunit; NCTC9060_05062; phage(gi100040)5.69e-31Showinfo_outline
175006495..5007034PHAGE_Entero_phi80_NC_021190: CII decision making protein; NCTC9060_05063; phage(gi824479625)2.21e-86Showinfo_outline
185007031..5008050PHAGE_Escher_PA28_NC_041935: hypothetical protein; NCTC9060_05064; phage(gi100031)1.89e-142Showinfo_outline
195008047..5008748PHAGE_Entero_DE3_NC_042057: DNA primase subunit; NCTC9060_05065; phage(gi100025)7.18e-167Showinfo_outline
205008745..5009047PHAGE_Escher_PA28_NC_041935: replication and recombination DNA helicase; NCTC9060_05066; phage(gi100033)4.33e-60Showinfo_outline
215009115..5009447PHAGE_Acinet_Acj61_NC_014661: putative quaternary ammonium compound-resistance protein qacE; NCTC9060_05067; phage(gi311992758)6.74e-10Showinfo_outline
225009702..5011228PHAGE_Burkho_Bcep176_NC_007497: gp53; DLP12; phage prophage; NCTC9060_05068(gi77864678)5.89e-37Showinfo_outline
235011693..5012244kinase inhibitor; NCTC9060_050690.0Showinfo_outline
245012254..5012817DNA-binding transcriptional regulator; DLP12 prophage; NCTC9060_050700.0Showinfo_outline
25complement(5012845..5013711)PROPHAGE_Escher_MG1655: IS3 transposase B; NCTC9060_05071; phage(gi16128284)0.0Showinfo_outline
26complement(5013708..5014007)PROPHAGE_Escher_MG1655: IS3 transposase A; NCTC9060_05072; phage(gi226524700)6.69e-65Showinfo_outline
275014527..5014982PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; DNA; phage base-flipping protein; NCTC9060_05073(gi401817579)3.77e-79Showinfo_outline
285014982..5015152PHAGE_Escher_HK639_NC_016158: NinE; NCTC9060_05074; phage(gi356870663)5.44e-19Showinfo_outline
295015145..5015435PHAGE_Salmon_118970_sal4_NC_030919: replication and recombination DNA helicase; NCTC9060_05075; phage(gi100033)3.69e-42Showinfo_outline
305015432..5015794PHAGE_Salmon_118970_sal4_NC_030919: membrane-associated initiation of head vertex; NCTC9060_05076; phage(gi100034)5.02e-38Showinfo_outline
315016017..5016400PHAGE_Shigel_Stx_NC_029120: antitermination protein Q; NCTC9060_05077; phage(gi985761278)4.06e-72Showinfo_outline
32complement(5016589..5017671)outer membrane porin protein NmpC; NCTC9060_050780.0Showinfo_outline
335018260..5018475PHAGE_Entero_VT2phi_272_NC_028656: holin; NCTC9060_05079; phage(gi966197762)5.28e-37Showinfo_outline
345018475..5018972PHAGE_Entero_SfI_NC_027339: lysozyme; NCTC9060_05080; phage(gi849250312)6.06e-117Showinfo_outline
355018969..5019430PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9060_05081; phage(gi100031)4.26e-106Showinfo_outline
36complement(5019462..5019755)PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9060_05082; phage(gi100032)1.28e-54Showinfo_outline
375020701..5021246PHAGE_Entero_DE3_NC_042057: RecA-like recombination protein; NCTC9060_05083; phage(gi100035)3.88e-129Showinfo_outline
385021221..5023146PHAGE_Entero_DE3_NC_042057: DNA polymerase; NCTC9060_05084; phage(gi100036)0.0Showinfo_outline
395023143..5023349PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9060_05085; phage(gi100037)4.55e-43Showinfo_outline
405023346..5024947PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9060_05086; phage(gi100038)0.0Showinfo_outline
415024928..5026247PHAGE_Entero_DE3_NC_042057: RegA; NCTC9060_05087; phage(gi100039)0.0Showinfo_outline
425026257..5026589PHAGE_Entero_DE3_NC_042057: clamp-loader subunit; NCTC9060_05088; phage(gi100040)9.90e-73Showinfo_outline
435026645..5027670PHAGE_Entero_DE3_NC_042057: clamp-loader subunit; NCTC9060_05089; phage(gi100041)0.0Showinfo_outline
445027712..5028107PHAGE_Entero_DE3_NC_042057: sliding clamp DNA polymerase; NCTC9060_05090; phage(gi100042)8.48e-74Showinfo_outline
455028119..5028472PHAGE_Entero_DE3_NC_042057: RNA polymerase binding protein; NCTC9060_05091; phage(gi100043)3.60e-78Showinfo_outline
465028484..5029062PHAGE_Entero_DE3_NC_042057: ssDNA binding protein; NCTC9060_05092; phage(gi100044)1.69e-131Showinfo_outline
475029059..5029454PHAGE_Entero_DE3_NC_042057: loader of DNA helicase; NCTC9060_05093; phage(gi100045)6.43e-91Showinfo_outline
485029462..5030241PHAGE_Entero_DE3_NC_042057: late promoter transcription; NCTC9060_05094; phage(gi100046)1.03e-171Showinfo_outline
495030257..5030679PHAGE_Entero_DE3_NC_042057: dsDNA binding protein; NCTC9060_05095; phage(gi100047)2.34e-101Showinfo_outline
505030661..5031095PHAGE_Entero_DE3_NC_042057: rnaseH; NCTC9060_05096; phage(gi100048)1.06e-101Showinfo_outline
515031088..5033652PHAGE_Entero_DE3_NC_042057: RNA polymerase sigma factor; NCTC9060_05097; phage(gi100049)0.0Showinfo_outline
525033649..5033978PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9060_05098; phage(gi100050)5.12e-76Showinfo_outline
535033978..5034676PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9060_05099; phage(gi100051)6.70e-173Showinfo_outline
545034682..5035425PHAGE_Entero_mEp460_NC_019716: tail fiber component; NCTC9060_05100; phage(gi428782332)4.54e-179Showinfo_outline
555035422..5035994PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9060_05101; phage(gi100053)9.87e-131Showinfo_outline
565036055..5039552PHAGE_Entero_DE3_NC_042057: recombination endonuclease subunit; NCTC9060_05102; phage(gi100054)0.0Showinfo_outline
575039623..5040222PHAGE_Entero_cdtI_NC_009514: putative Lom-like outer membrane protein; NCTC9060_05103; phage(gi148609401)1.71e-141Showinfo_outline
585040287..5043688PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9060_05104; phage(gi100056)6.17e-97Showinfo_outline
595049440..5049454attR0.0Showinfo_outline

Region 11, total 56 CDS

#CDS PositionBLAST HitE-ValueSequence
15131415..5131426attL0.0Showinfo_outline
2complement(5131686..5132717)PHAGE_Salmon_Fels_2_NC_010463: integrase; NCTC9060_05188; phage(gi169936064)1.33e-129Showinfo_outline
3complement(5132904..5133095)Uncharacterised protein; NCTC9060_051890.0Showinfo_outline
4complement(5133111..5133680)PHAGE_Salmon_Fels_2_NC_010463: P2 CI-like protein; NCTC9060_05190; phage(gi169936063)1.12e-43Showinfo_outline
55133806..5134027PHAGE_Haemop_HP2_NC_003315: orf2(S)cox; NCTC9060_05191; phage(gi17981819)1.21e-06Showinfo_outline
65134060..5134569PHAGE_Salmon_Fels_2_NC_010463: bacteriophage regulatory protein CII; NCTC9060_05192; phage(gi169936061)2.39e-111Showinfo_outline
75134577..5134777PHAGE_Salmon_Fels_2_NC_010463: hypothetical protein; NCTC9060_05193; phage(gi169936060)7.37e-17Showinfo_outline
85134741..5135082PHAGE_Salmon_Fels_2_NC_010463: hypothetical protein; NCTC9060_05194; phage(gi169936058)4.25e-67Showinfo_outline
95135150..5135383PHAGE_Salmon_Fels_2_NC_010463: hypothetical protein; NCTC9060_05195; phage(gi169936057)6.22e-36Showinfo_outline
105135383..5135610PHAGE_Salmon_Fels_2_NC_010463: DksA-like zinc finger domain containing protein; NCTC9060_05196; phage(gi169936056)4.69e-44Showinfo_outline
115135607..5136464PHAGE_Salmon_Fels_2_NC_010463: DNA adenine methylase-like protein; NCTC9060_05197; phage(gi169936055)1.82e-150Showinfo_outline
125136461..5138875PHAGE_Salmon_Fels_2_NC_010463: P2 gpA-like protein; NCTC9060_05198; phage(gi169936054)0.0Showinfo_outline
135139227..5139460PHAGE_Salmon_Fels_2_NC_010463: TumB protein; NCTC9060_05199; phage(gi169936052)8.32e-49Showinfo_outline
145139819..5140625Uncharacterised protein; NCTC9060_052000.0Showinfo_outline
155140643..5141284putative repressor protein from prophage; NCTC9060_052010.0Showinfo_outline
165141295..5142134Uncharacterised protein; NCTC9060_052020.0Showinfo_outline
17complement(5142179..5143219)PHAGE_Salmon_Fels_2_NC_010463: portal vertex protein; NCTC9060_05203; phage(gi169936049)0.0Showinfo_outline
18complement(5143216..5143944)PHAGE_Salmon_Fels_2_NC_010463: terminase ATPase subunit; NCTC9060_05204; phage(gi169936048)1.10e-26Showinfo_outline
19complement(5143944..5145710)PHAGE_Salmon_Fels_2_NC_010463: terminase ATPase subunit; NCTC9060_05205; phage(gi169936048)0.0Showinfo_outline
205145853..5146686PHAGE_Salmon_Fels_2_NC_010463: capsid-scaffolding protein; NCTC9060_05206; phage(gi169936047)9.71e-175Showinfo_outline
215146702..5147760PHAGE_Salmon_Fels_2_NC_010463: capsid protein; NCTC9060_05207; phage(gi169936046)0.0Showinfo_outline
225147764..5148414PHAGE_Salmon_Fels_2_NC_010463: terminase endonuclease subunit; NCTC9060_05208; phage(gi169936045)6.69e-127Showinfo_outline
235148510..5148974PHAGE_Salmon_Fels_2_NC_010463: P2 gpL-like protein; NCTC9060_05209; phage(gi169936044)2.62e-102Showinfo_outline
245148974..5149177PHAGE_Salmon_Fels_2_NC_010463: P2 gpX-like tail protein; NCTC9060_05210; phage(gi169936043)8.30e-41Showinfo_outline
255149181..5149396PHAGE_Salmon_Fels_2_NC_010463: lysis protein; NCTC9060_05211; phage(gi169936042)1.13e-37Showinfo_outline
265149377..5149889PHAGE_Salmon_Fels_2_NC_010463: endolysin; NCTC9060_05212; phage(gi169936041)5.60e-104Showinfo_outline
275149891..5150268membrane protein; NCTC9060_052130.0Showinfo_outline
285150265..5150693PHAGE_Salmon_Fels_2_NC_010463: P2 LysB-like protein; NCTC9060_05214; phage(gi169936038)2.97e-64Showinfo_outline
295150789..5151220PHAGE_Salmon_Fels_2_NC_010463: P2 gpR-like tail completion protein; NCTC9060_05215; phage(gi169936036)1.01e-92Showinfo_outline
305151213..5151659PHAGE_Salmon_Fels_2_NC_010463: P2 gpS-like tail completion protein; NCTC9060_05216; phage(gi169936035)7.78e-95Showinfo_outline
315151728..5152306PHAGE_Salmon_Fels_2_NC_010463: P2 gpV-like protein; NCTC9060_05217; phage(gi169936034)7.64e-120Showinfo_outline
325152303..5152662PHAGE_Salmon_Fels_2_NC_010463: baseplate wedge subunit; NCTC9060_05218; phage(gi169936033)3.71e-68Showinfo_outline
335152649..5153557PHAGE_Salmon_Fels_2_NC_010463: baseplate assembly protein; NCTC9060_05219; phage(gi169936032)0.0Showinfo_outline
345153550..5154155PHAGE_Salmon_Fels_2_NC_010463: P2 gpI-like baseplate assembly protein; NCTC9060_05220; phage(gi169936031)1.65e-138Showinfo_outline
355154152..5155654PHAGE_Salmon_Fels_2_NC_010463: P2 gpH-like protein; NCTC9060_05221; phage(gi169936030)1.92e-145Showinfo_outline
365155657..5156100PHAGE_Escher_pro483_NC_028943: tail fiber assembly protein; NCTC9060_05222; phage(gi971758532)1.41e-44Showinfo_outline
37complement(5156072..5156674)PHAGE_Entero_HK106_NC_019768: tail fiber assembly protein; NCTC9060_05223; phage(gi428783304)8.01e-127Showinfo_outline
385156741..5157016PHAGE_Entero_P1_NC_005856: InsA; NCTC9060_05224; phage(gi46401643)4.76e-62Showinfo_outline
395157061..5157438PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; NCTC9060_05225; phage(gi557307573)4.00e-87Showinfo_outline
40complement(5157373..5157951)PHAGE_Escher_pro483_NC_028943: tail fiber protein; NCTC9060_05226; phage(gi971758534)2.74e-65Showinfo_outline
415157982..5158548PHAGE_Salmon_Fels_2_NC_010463: DNA-invertase; e14; phage prophage; NCTC9060_05227(gi169936026)1.16e-114Showinfo_outline
425158690..5159862PHAGE_Salmon_Fels_2_NC_010463: major tail sheath protein; NCTC9060_05228; phage(gi169936025)0.0Showinfo_outline
435159872..5160387PHAGE_Salmon_Fels_2_NC_010463: major tail tube protein; NCTC9060_05229; phage(gi169936024)9.45e-118Showinfo_outline
445160442..5160744PHAGE_Salmon_Fels_2_NC_010463: P2 gpE-like tail protein; NCTC9060_05230; phage(gi169936023)8.17e-58Showinfo_outline
455161129..5161878PHAGE_Salmon_Fels_2_NC_010463: P2 gpT-like tail protein; NCTC9060_05231; phage(gi169936021)1.94e-70Showinfo_outline
465161888..5162130PHAGE_Salmon_Fels_2_NC_010463: P2 gpT-like tail protein; NCTC9060_05232; phage(gi169936021)3.68e-35Showinfo_outline
475162223..5163947PHAGE_Salmon_Fels_2_NC_010463: P2 gpT-like tail protein; NCTC9060_05233; phage(gi169936021)1.36e-162Showinfo_outline
485163944..5164429PHAGE_Salmon_Fels_2_NC_010463: P2 gpU-like tail protein; NCTC9060_05234; phage(gi169936020)5.31e-98Showinfo_outline
495164426..5165526PHAGE_Salmon_Fels_2_NC_010463: tail protein; NCTC9060_05235; phage(gi169936019)0.0Showinfo_outline
505165617..5165835PHAGE_Salmon_Fels_2_NC_010463: P2 gpOgr-like protein (acttivation of late gene expression); NCTC9060_05236; phage(gi169936018)1.22e-27Showinfo_outline
51complement(5166071..5166736)putative permease; NCTC9060_052380.0Showinfo_outline
52complement(5166762..5167319)putative permease; NCTC9060_052390.0Showinfo_outline
53complement(5167285..5167758)putative transport protein with two RCK domains; NCTC9060_052400.0Showinfo_outline
545168028..5168369inner membrane protein YbjM; NCTC9060_052410.0Showinfo_outline
55complement(5168432..5168689)PHAGE_Serrat_BF_NC_041917: chaperone for tail fiber formation; NCTC9060_05242; phage(gi100190)5.03e-17Showinfo_outline
565169598..5169609attR0.0Showinfo_outline
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Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)

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Length: 5173590 bps
Phages: 11
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Lysis
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Fiber Protein
Plate Protein
tRNA

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