Submission Results

Sequence Name: Not Available

GenBank Accession Number: UGDP01000002.1

GenInfo (GI) Number: 0000000000

Download Results: UGDP01000002.1.PHASTER.zip

gi|00000000|ref|UGDP01000002.1| Escherichia coli strain NCTC9098 genome assembly, contig: 4390918, gc%: 50.66%

Download summary as .txt file: summary.txt file_download

Total: 10 prophage regions have been identified, of which 5 regions are intact, 3 regions are incomplete, and 2 regions are questionable.

RegionRegion LengthCompletenessScore# Total ProteinsRegion PositionMost Common PhageGC %Details
120Kbquestionable9016273-20370 info_outlinePHAGE_Entero_cdtI_NC_009514(4)48.40%Show info_outline
216Kbintact13019309227-325245 info_outlinePHAGE_Entero_YYZ_2008_NC_011356(7)51.72%Show info_outline
331.4Kbincomplete5014444521-475981 info_outlinePHAGE_Salmon_118970_sal3_NC_031940(4)48.57%Show info_outline
436.4Kbintact12043469931-506416 info_outlinePHAGE_Entero_DE3_NC_042057(17)52.40%Show info_outline
544Kbintact15054553942-597956 info_outlinePHAGE_Entero_P88_NC_026014(31)50.99%Show info_outline
667.6Kbintact15068937421-1005090 info_outlinePHAGE_Entero_mEp460_NC_019716(24)48.29%Show info_outline
725.8Kbincomplete40241433665-1459501 info_outlinePHAGE_Entero_DE3_NC_042057(2)48.84%Show info_outline
833.6Kbquestionable70261455325-1488958 info_outlinePHAGE_Entero_lambda_NC_001416(19)53.66%Show info_outline
97.3Kbincomplete3084270882-4278276 info_outlinePHAGE_Bacill_G_NC_023719(1)55.16%Show info_outline
1057.6Kbintact110774332766-4390397 info_outlinePHAGE_Entero_DE3_NC_042057(22)50.05%Show info_outline
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Region: The number assigned to the region.
Region Length: The length of the sequence of that region (in bp).
Completeness: A prediction of whether the region contains a intact or incomplete prophage based on the above criteria.
Score: The score of the region based on the above criteria.
# Total Proteins: The number of ORFs present in the region.
Region Position: The start and end positions of the region on the bacterial chromosome.
Most Common Phage: The phage(s) with the highest number of proteins most similar to those in the region.
GC %: The percentage of GC nucleotides of the region.

Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:

  1. If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
Method 2:
  1. If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
Method 3:
  1. If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
  2. If the size of the region is greater than 30 Kb, the score will be increased by 10.
  3. If there are at least 40 proteins in the region, the score will be increased by 10.
  4. If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
Compared the total score of method 2 with the total score of method 3, the bigger one is chosen as the total score of the region.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.

gi|00000000|ref|UGDP01000002.1| Escherichia coli strain NCTC9098 genome assembly, contig: 4390918, gc%: 50.66%

Download details as .txt file: detail.txt file_download

Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File

Region 1, total 19 CDS

#CDS PositionBLAST HitE-ValueSequence
1273..785PHAGE_Entero_cdtI_NC_009514: putative tail tip assembly protein; NCTC9098_00838; phage(gi148609400)6.21e-108Showinfo_outline
2544..556attL0.0Showinfo_outline
3823..1116PHAGE_Entero_cdtI_NC_009514: putative tail tip assembly protein; NCTC9098_00839; phage(gi148609400)5.18e-40Showinfo_outline
41089..2627PHAGE_Entero_cdtI_NC_009514: putative tail tip assembly protein; NCTC9098_00840; phage(gi148609400)0.0Showinfo_outline
53019..3258PHAGE_Entero_cdtI_NC_009514: putative tail tip assembly protein; NCTC9098_00841; phage(gi148609400)7.27e-40Showinfo_outline
63746..4192PHAGE_Entero_cdtI_NC_009514: putative Lom-like outer membrane protein; NCTC9098_00842; phage(gi148609401)8.59e-98Showinfo_outline
74411..4701PHAGE_Entero_BP_4795_NC_004813: putative tail fiber protein; NCTC9098_00843; phage(gi157166060)2.12e-58Showinfo_outline
84670..5221PHAGE_Entero_cdtI_NC_009514: putative tail fiber protein; NCTC9098_00844; phage(gi148609402)1.76e-49Showinfo_outline
95389..5916PHAGE_Entero_cdtI_NC_009514: putative tail fiber protein; NCTC9098_00845; phage(gi148609402)2.64e-53Showinfo_outline
106175..6945PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; NCTC9098_00846; phage(gi23505470)1.73e-81Showinfo_outline
116986..7156PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; NCTC9098_00847; phage(gi23505470)4.24e-13Showinfo_outline
127190..8272T3SS secreted effector NleC-like protein; NCTC9098_008480.0Showinfo_outline
139310..9918PHAGE_Entero_cdtI_NC_009514: hypothetical protein; NCTC9098_00850; phage(gi148609405)2.00e-134Showinfo_outline
149953..10087IS encoded protein; NCTC9098_008510.0Showinfo_outline
1510149..10847T3SS secreted effector NleD-like protein; NCTC9098_008520.0Showinfo_outline
16complement(10944..12110)PHAGE_Entero_HK633_NC_019719: integrase; NCTC9098_00853; phage(gi428782545)0.0Showinfo_outline
17complement(12272..12346)tRNA0.0Showinfo_outline
18complement(12422..13354)PHAGE_Entero_VT2phi_272_NC_028656: hypothetical protein; NCTC9098_00855; phage(gi966197797)0.0Showinfo_outline
1920370..20382attR0.0Showinfo_outline

Region 2, total 21 CDS

#CDS PositionBLAST HitE-ValueSequence
1309227..309248attL0.0Showinfo_outline
2complement(309406..310101)PHAGE_Entero_HK022_NC_002166: integrase; NCTC9098_01140; phage(gi9634144)1.82e-160Showinfo_outline
3complement(310423..311076)PHAGE_Shigel_Sf6_NC_005344: putative transposase OrfB; NCTC9098_01141; phage(gi41057343)5.53e-163Showinfo_outline
4complement(311289..311591)PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; NCTC9098_01142; phage(gi24373865)6.33e-10Showinfo_outline
5311665..313257PHAGE_Entero_lambda_NC_001416: tail component; NCTC9098_01143; phage(gi9626259)0.0Showinfo_outline
6313254..313583PHAGE_Entero_lambda_NC_001416: tail component; NCTC9098_01144; phage(gi9626260)8.02e-68Showinfo_outline
7313583..314281PHAGE_Entero_lambda_NC_001416: tail component; NCTC9098_01145; phage(gi9626261)5.54e-170Showinfo_outline
8314287..315030PHAGE_Entero_YYZ_2008_NC_011356: putative tail component K-like protein; NCTC9098_01146; phage(gi209427789)7.67e-159Showinfo_outline
9315027..315599PHAGE_Entero_lambda_NC_001416: tail component; NCTC9098_01147; phage(gi9626263)2.81e-131Showinfo_outline
10315659..317875PHAGE_Entero_lambda_NC_001416: tail:host specificity protein; NCTC9098_01148; phage(gi9626264)0.0Showinfo_outline
11317872..318132PHAGE_Entero_mEp460_NC_019716: host specificity protein; NCTC9098_01149; phage(gi428782334)9.48e-40Showinfo_outline
12318089..318379PHAGE_Entero_mEp460_NC_019716: host specificity protein; NCTC9098_01150; phage(gi428782334)4.22e-34Showinfo_outline
13318406..318600PHAGE_Entero_lambda_NC_001416: tail:host specificity protein; NCTC9098_01151; phage(gi9626264)1.29e-23Showinfo_outline
14318560..319063PHAGE_Entero_YYZ_2008_NC_011356: phage-related tail protein; NCTC9098_01152; phage(gi209427791)1.81e-107Showinfo_outline
15319130..319729PHAGE_Entero_YYZ_2008_NC_011356: putative outer membrane protein Lom precursor; NCTC9098_01153; phage(gi209427792)1.32e-138Showinfo_outline
16319794..321107PHAGE_Entero_YYZ_2008_NC_011356: putative tail protein; NCTC9098_01154; phage(gi209427793)0.0Showinfo_outline
17321109..321378PHAGE_Entero_YYZ_2008_NC_011356: hypothetical protein; NCTC9098_01155; phage(gi209427794)1.02e-57Showinfo_outline
18321599..322141PHAGE_Escher_PA28_NC_041935: hypothetical protein; NCTC9098_01156; phage(gi100081)1.87e-34Showinfo_outline
19322271..322831PHAGE_Entero_YYZ_2008_NC_011356: hypothetical protein; NCTC9098_01157; phage(gi209427796)8.96e-25Showinfo_outline
20complement(323170..324411)PHAGE_Entero_BP_4795_NC_004813: NleA4795 protein; NCTC9098_01158; phage(gi157166068)0.0Showinfo_outline
21325245..325266attR0.0Showinfo_outline

Region 3, total 16 CDS

#CDS PositionBLAST HitE-ValueSequence
1444521..444532attL0.0Showinfo_outline
2complement(455370..455627)PHAGE_Salmon_118970_sal3_NC_031940: baseplate subunit; NCTC9098_01292; phage(gi100105)8.23e-28Showinfo_outline
3complement(455647..456396)PHAGE_Salmon_118970_sal3_NC_031940: baseplate subunit; NCTC9098_01293; phage(gi100105)2.53e-81Showinfo_outline
4complement(456396..456599)PHAGE_Pectob_ZF40_NC_019522: hypothetical protein; NCTC9098_01294; phage(gi422936643)3.47e-07Showinfo_outline
5complement(456658..459129)PHAGE_Salmon_118970_sal3_NC_031940: baseplate hub subunit; NCTC9098_01295; phage(gi100107)1.78e-69Showinfo_outline
6complement(459222..459413)putative prophage protein; NCTC9098_012960.0Showinfo_outline
7complement(459410..459598)cell division inhibition protein; NCTC9098_012970.0Showinfo_outline
8complement(460130..460504)PHAGE_Entero_VT2phi_272_NC_028656: hypothetical protein; NCTC9098_01300; phage(gi966197735)1.26e-08Showinfo_outline
9complement(460516..460749)PHAGE_Salico_CGphi29_NC_020844: hypothetical protein; NCTC9098_01301; phage(gi472340166)4.47e-11Showinfo_outline
10complement(460961..461299)PHAGE_Pectob_ZF40_NC_019522: putative cI repressor; NCTC9098_01302; phage(gi422936650)1.34e-08Showinfo_outline
11461691..461933PHAGE_Pectob_ZF40_NC_019522: putative cro anti-repressor; NCTC9098_01303; phage(gi422936651)3.77e-11Showinfo_outline
12461917..462342PHAGE_Pectob_ZF40_NC_019522: putative cII repressor; NCTC9098_01304; phage(gi422936652)1.08e-05Showinfo_outline
13462414..463004replication protein; NCTC9098_013050.0Showinfo_outline
14463034..463483PHAGE_Shigel_POCJ13_NC_025434: primosomal protein I; NCTC9098_01306; phage(gi725949717)1.66e-64Showinfo_outline
15463524..463946PHAGE_Shigel_Stx_NC_029120: LygF; NCTC9098_01307; phage(gi985761265)8.27e-62Showinfo_outline
16475981..475992attR0.0Showinfo_outline

Region 4, total 43 CDS

#CDS PositionBLAST HitE-ValueSequence
1469931..470086PHAGE_Entero_933W_NC_000924: host killer protein; NCTC9098_01313; phage(gi9632541)1.17e-25Showinfo_outline
2470533..471582PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC9098_01314; phage(gi428782365)8.25e-132Showinfo_outline
3471595..471969PHAGE_Shigel_Stx_NC_029120: crossover junction endodeoxyribonuclease rusA; NCTC9098_01315; phage(gi985761276)2.39e-45Showinfo_outline
4471966..472787PHAGE_Entero_HK225_NC_019717: late gene regulator Q; NCTC9098_01316; phage(gi428782441)3.21e-117Showinfo_outline
5473241..473387PHAGE_Erwini_vB_EamM_ChrisDB_NC_031126: DNA topoisomerase medium subunit; NCTC9098_01317; phage(gi100004)8.40e-12Showinfo_outline
6473384..473515PHAGE_Escher_Pollock_NC_027381: hypothetical protein; NCTC9098_01318; phage(gi849254797)2.68e-09Showinfo_outline
7473866..475716PHAGE_Entero_YYZ_2008_NC_011356: hypothetical protein; NCTC9098_01320; phage(gi209427766)0.0Showinfo_outline
8476018..476134PHAGE_Stx2_c_1717_NC_011357: holin protein S-like protein; NCTC9098_01321; phage(gi209447171)6.66e-20Showinfo_outline
9476204..476506PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; NCTC9098_01322; phage(gi24373865)6.33e-10Showinfo_outline
10476719..477372PHAGE_Shigel_Sf6_NC_005344: putative transposase OrfB; NCTC9098_01323; phage(gi41057343)1.04e-163Showinfo_outline
11complement(477732..477968)PHAGE_Stx2_c_86_NC_008464: hypothetical protein; NCTC9098_01324; phage(gi116221998)1.30e-15Showinfo_outline
12478164..478697PHAGE_Entero_YYZ_2008_NC_011356: putative endolysin; Qin; phage prophage; NCTC9098_01325(gi209427769)1.23e-122Showinfo_outline
13478918..479031putative transmembrane protein; NCTC9098_013260.0Showinfo_outline
14479033..479500PHAGE_Entero_BP_4795_NC_004813: putative endopeptidase Rz; NCTC9098_01327; phage(gi157166036)2.07e-96Showinfo_outline
15479966..480280PHAGE_Escher_Pollock_NC_027381: transcriptional regulator; NCTC9098_01328; phage(gi849254852)4.50e-06Showinfo_outline
16480989..481498PHAGE_Entero_DE3_NC_042057: RecA-like recombination protein; NCTC9098_01329; phage(gi100035)1.72e-20Showinfo_outline
17481470..483014PHAGE_Entero_DE3_NC_042057: DNA polymerase; NCTC9098_01330; phage(gi100036)0.0Showinfo_outline
18482974..483399PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; large terminase subunit; Lambda gpA homolog; NCTC9098_01331; phage(gi169257235)2.70e-62Showinfo_outline
19483383..483589PHAGE_Entero_HK225_NC_019717: head-tail connector gpW; NCTC9098_01332; phage(gi428782379)1.09e-17Showinfo_outline
20483586..485178PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9098_01333; phage(gi100038)0.0Showinfo_outline
21485168..486673PHAGE_Entero_DE3_NC_042057: RegA; NCTC9098_01334; phage(gi100039)2.26e-135Showinfo_outline
22486710..487057PHAGE_Entero_DE3_NC_042057: clamp-loader subunit; NCTC9098_01335; phage(gi100040)6.86e-30Showinfo_outline
23487115..488068PHAGE_Entero_DE3_NC_042057: clamp-loader subunit; NCTC9098_01336; phage(gi100041)8.33e-82Showinfo_outline
24488196..488570PHAGE_Entero_HK225_NC_019717: head assembly protein Fi; NCTC9098_01337; phage(gi428782384)2.09e-05Showinfo_outline
25488563..488916PHAGE_Entero_DE3_NC_042057: RNA polymerase binding protein; NCTC9098_01338; phage(gi100043)1.63e-53Showinfo_outline
26488932..489465PHAGE_Entero_DE3_NC_042057: ssDNA binding protein; NCTC9098_01339; phage(gi100044)2.75e-75Showinfo_outline
27489462..489857PHAGE_Entero_DE3_NC_042057: loader of DNA helicase; NCTC9098_01340; phage(gi100045)4.09e-74Showinfo_outline
28489865..490617PHAGE_Entero_DE3_NC_042057: late promoter transcription; NCTC9098_01341; phage(gi100046)4.82e-139Showinfo_outline
29490631..491062PHAGE_Entero_DE3_NC_042057: dsDNA binding protein; NCTC9098_01342; phage(gi100047)1.91e-61Showinfo_outline
30491089..491502PHAGE_Entero_DE3_NC_042057: rnaseH; NCTC9098_01343; phage(gi100048)6.77e-59Showinfo_outline
31491483..494062PHAGE_Entero_DE3_NC_042057: RNA polymerase sigma factor; NCTC9098_01344; phage(gi100049)0.0Showinfo_outline
32494059..494388PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9098_01345; phage(gi100050)3.07e-61Showinfo_outline
33494388..495086PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9098_01346; phage(gi100051)7.22e-136Showinfo_outline
34495092..495835PHAGE_Entero_BP_4795_NC_004813: putative tail fiber component; NCTC9098_01347; phage(gi157166055)3.83e-180Showinfo_outline
35495832..496413PHAGE_Stx2_c_1717_NC_011357: putative tail component; NCTC9098_01348; phage(gi209447195)8.33e-135Showinfo_outline
36complement(496604..497131)PHAGE_Salmon_Fels_1_NC_010391: hypothetical bacteriophage protein; NCTC9098_01349; phage(gi169257202)3.23e-70Showinfo_outline
37497265..500741PHAGE_Entero_DE3_NC_042057: recombination endonuclease subunit; NCTC9098_01350; phage(gi100054)0.0Showinfo_outline
38500810..501433PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9098_01351; phage(gi100055)2.50e-86Showinfo_outline
39501498..502811PROPHAGE_Escher_Sakai: putative tail fiber protein; NCTC9098_01352; phage(gi15832195)0.0Showinfo_outline
40502813..503082PHAGE_Stx2_c_1717_NC_011357: hypothetical protein; NCTC9098_01353; phage(gi209447199)7.36e-57Showinfo_outline
41503259..504239PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; NCTC9098_01354; phage(gi23505470)2.30e-111Showinfo_outline
42505101..505661PHAGE_Entero_cdtI_NC_009514: hypothetical protein; NCTC9098_01356; phage(gi148609405)2.34e-92Showinfo_outline
43505847..506416T3SS effector NleF; NCTC9098_013570.0Showinfo_outline

Region 5, total 59 CDS

#CDS PositionBLAST HitE-ValueSequence
1553942..555774PHAGE_Bacill_vB_BanS_Tsamsa_NC_023007: hypothetical protein; NCTC9098_01417; phage(gi564292625)3.02e-06Showinfo_outline
2555831..556379CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; NCTC9098_014180.0Showinfo_outline
3556531..556606tRNA0.0Showinfo_outline
4556661..556734tRNA0.0Showinfo_outline
5556747..556833tRNA0.0Showinfo_outline
6556779..556820attL0.0Showinfo_outline
7558052..558246transposase; NCTC9098_014220.0Showinfo_outline
8558215..558517PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; NCTC9098_01423; phage(gi24373865)6.33e-10Showinfo_outline
9558730..559383PHAGE_Shigel_Sf6_NC_005344: putative transposase OrfB; NCTC9098_01424; phage(gi41057343)1.04e-163Showinfo_outline
10559397..560401PHAGE_Mannhe_vB_MhS_535AP2_NC_028853: transposase; NCTC9098_01425; phage(gi971749639)7.09e-10Showinfo_outline
11complement(560766..561419)PHAGE_Shigel_Sf6_NC_005344: putative transposase OrfB; NCTC9098_01426; phage(gi41057343)1.04e-163Showinfo_outline
12complement(561632..561934)PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; NCTC9098_01427; phage(gi24373865)6.33e-10Showinfo_outline
13562282..563679Uncharacterised protein; NCTC9098_014280.0Showinfo_outline
14complement(563880..564989)PHAGE_Entero_P88_NC_026014: gene D protein; NCTC9098_01429; phage(gi744692751)0.0Showinfo_outline
15565147..566331PHAGE_Entero_P88_NC_026014: tail sheath monomer; NCTC9098_01430; phage(gi744692749)0.0Showinfo_outline
16566331..566843PHAGE_Entero_P88_NC_026014: major tail tube protein; NCTC9098_01431; phage(gi744692748)8.40e-121Showinfo_outline
17566899..567159PHAGE_Entero_P88_NC_026014: tail protein; NCTC9098_01432; phage(gi744692747)6.85e-27Showinfo_outline
18567425..570232PHAGE_Entero_P88_NC_026014: tail tape measure protein; NCTC9098_01433; phage(gi744692745)0.0Showinfo_outline
19570245..570733PHAGE_Entero_P88_NC_026014: tail protein; NCTC9098_01434; phage(gi744692744)1.97e-116Showinfo_outline
20570890..571462PHAGE_Strept_9874_NC_031023: hypothetical protein; NCTC9098_01435; phage(gi100020)2.76e-09Showinfo_outline
21complement(572094..572540)PHAGE_Salmon_SEN5_NC_028701: tail fiber protein; NCTC9098_01437; phage(gi966201575)1.43e-34Showinfo_outline
22complement(572509..572997)PHAGE_Salmon_SEN5_NC_028701: tail fiber protein; NCTC9098_01438; phage(gi966201575)2.07e-75Showinfo_outline
23complement(573175..573879)PHAGE_Entero_lambda_NC_001416: Tail fiber; NCTC9098_01439; phage(gi9626268)1.15e-63Showinfo_outline
24complement(573854..574954)PHAGE_Entero_P88_NC_026014: tail fiber protein; NCTC9098_01440; phage(gi744692739)0.0Showinfo_outline
25complement(574957..575487)PHAGE_Entero_P88_NC_026014: tail protein; NCTC9098_01441; phage(gi744692738)8.55e-116Showinfo_outline
26complement(575480..576376)PHAGE_Entero_P88_NC_026014: baseplate assembly protein J; NCTC9098_01442; phage(gi744692737)0.0Showinfo_outline
27complement(576445..576729)PHAGE_Entero_P88_NC_026014: lysozyme family baseplate assembly protein; NCTC9098_01443; phage(gi744692736)1.80e-50Showinfo_outline
28complement(576726..577307)PHAGE_Entero_P88_NC_026014: baseplate assembly protein V; NCTC9098_01444; phage(gi744692735)1.33e-132Showinfo_outline
29complement(577304..577948)PHAGE_Entero_P88_NC_026014: tail protein; NCTC9098_01445; phage(gi744692734)6.24e-151Showinfo_outline
30complement(577932..578399)PHAGE_Entero_P88_NC_026014: tail completion protein; NCTC9098_01446; phage(gi744692733)2.03e-111Showinfo_outline
31complement(578537..578944)PHAGE_Entero_P88_NC_026014: hypothetical protein; NCTC9098_01447; phage(gi744692732)1.20e-88Showinfo_outline
32complement(578941..579333)PHAGE_Entero_P88_NC_026014: endolysin; NCTC9098_01448; phage(gi744692731)9.63e-93Showinfo_outline
33complement(579330..579653)PHAGE_Entero_P88_NC_026014: holin; NCTC9098_01449; phage(gi744692730)3.26e-72Showinfo_outline
34complement(579656..579856)PHAGE_Entero_P88_NC_026014: tail component protein; NCTC9098_01450; phage(gi744692729)6.35e-43Showinfo_outline
35complement(579856..580350)PHAGE_Entero_P88_NC_026014: head completion-stabilization protein; NCTC9098_01451; phage(gi744692728)5.46e-113Showinfo_outline
36complement(580452..581252)PHAGE_Entero_P88_NC_026014: terminase endonuclease subunit; NCTC9098_01452; phage(gi744692727)0.0Showinfo_outline
37complement(581298..582350)PHAGE_Entero_P88_NC_026014: major capsid protein; NCTC9098_01453; phage(gi744692726)0.0Showinfo_outline
38complement(582374..583210)PHAGE_Entero_P88_NC_026014: capsid scaffolding protein; NCTC9098_01454; phage(gi744692725)0.0Showinfo_outline
39583365..585116PHAGE_Entero_P88_NC_026014: terminase ATPase subunit; NCTC9098_01455; phage(gi744692724)0.0Showinfo_outline
40585116..586162PHAGE_Entero_P88_NC_026014: PBSX family portal protein; NCTC9098_01456; phage(gi744692723)0.0Showinfo_outline
41586694..587224putative transmembrane protein; NCTC9098_014570.0Showinfo_outline
42complement(587315..587698)PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; NCTC9098_01458; phage(gi23505476)1.02e-43Showinfo_outline
43complement(587762..588073)PHAGE_Entero_P88_NC_026014: chromosome partitioning protein; NCTC9098_01459; phage(gi744692718)2.09e-67Showinfo_outline
44complement(588078..589037)PHAGE_Entero_P88_NC_026014: recombinase; NCTC9098_01460; phage(gi744692717)0.0Showinfo_outline
45complement(589114..591954)PHAGE_Entero_P88_NC_026014: replication protein; NCTC9098_01461; phage(gi744692716)0.0Showinfo_outline
46complement(591951..592340)Uncharacterised protein; NCTC9098_014620.0Showinfo_outline
47complement(592449..592667)PHAGE_Entero_P88_NC_026014: hypothetical protein; NCTC9098_01463; phage(gi744692710)3.19e-12Showinfo_outline
48complement(592664..592867)PHAGE_Entero_P88_NC_026014: hypothetical protein; NCTC9098_01464; phage(gi744692708)4.26e-34Showinfo_outline
49complement(592977..593306)PHAGE_Entero_P88_NC_026014: DNA modification methyltransferase; NCTC9098_01465; phage(gi744692706)1.18e-48Showinfo_outline
50complement(593467..593595)PHAGE_Entero_P88_NC_026014: hypothetical protein; NCTC9098_01466; phage(gi744692705)3.09e-14Showinfo_outline
51complement(593606..593956)PHAGE_Entero_P88_NC_026014: hypothetical protein; NCTC9098_01467; phage(gi744692704)4.04e-66Showinfo_outline
52complement(593978..594181)PHAGE_Haemop_HP2_NC_003315: orf2(S)cox; NCTC9098_01468; phage(gi17981819)1.54e-11Showinfo_outline
53594253..594390Uncharacterised protein; NCTC9098_014690.0Showinfo_outline
54594480..594884PHAGE_Burkho_KS10_NC_011216: hypothetical protein; NCTC9098_01470; phage(gi198449275)2.44e-21Showinfo_outline
55594900..595550putative transmembrane protein; NCTC9098_014710.0Showinfo_outline
56595580..595927PHAGE_Salmon_SEN1_NC_029003: hypothetical protein; NCTC9098_01472; phage(gi971764937)2.93e-05Showinfo_outline
57595933..596934PHAGE_Haemop_HP2_NC_003315: integrase; NCTC9098_01473; phage(gi17981816)2.45e-133Showinfo_outline
58597041..597082attR0.0Showinfo_outline
59597291..597956PHAGE_Sphing_PAU_NC_019521: gp60; NCTC9098_01474; phage(gi435844563)9.78e-07Showinfo_outline

Region 6, total 70 CDS

#CDS PositionBLAST HitE-ValueSequence
1937421..938440PHAGE_Synech_S_SM2_NC_015279: zinc-containing alcohol dehydrogenase superfamily protein; NCTC9098_01830; phage(gi326781942)7.18e-19Showinfo_outline
2938473..938484attL0.0Showinfo_outline
3complement(938628..939908)PHAGE_Entero_YYZ_2008_NC_011356: putative integrase; Qin; phage prophage; NCTC9098_01831(gi209427727)0.0Showinfo_outline
4complement(939943..940179)PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage excisionase; NCTC9098_01832; phage(gi169257269)1.10e-20Showinfo_outline
5complement(940267..942738)PHAGE_Salmon_118970_sal3_NC_031940: baseplate hub subunit; NCTC9098_01833; phage(gi100107)2.98e-69Showinfo_outline
6complement(942832..943023)putative prophage protein; NCTC9098_018340.0Showinfo_outline
7complement(943020..943208)division inhibition protein; NCTC9098_018350.0Showinfo_outline
8complement(943696..944313)putative prophage protein; NCTC9098_018370.0Showinfo_outline
9complement(944273..944428)PHAGE_Salico_CGphi29_NC_020844: hypothetical protein; NCTC9098_01838; phage(gi472340166)1.81e-11Showinfo_outline
10complement(944620..945078)PHAGE_Cronob_phiES15_NC_018454: putative transcriptional repressor DicA; NCTC9098_01839; phage(gi401817574)1.14e-34Showinfo_outline
11945105..945332PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9098_01840; phage(gi100022)1.63e-12Showinfo_outline
12945316..945837PHAGE_Pectob_ZF40_NC_019522: putative cII repressor; NCTC9098_01841; phage(gi422936652)3.27e-05Showinfo_outline
13945818..946783PHAGE_Shigel_SfIV_NC_022749: replication protein; NCTC9098_01842; phage(gi557307567)1.12e-68Showinfo_outline
14946824..947243PHAGE_Shigel_Stx_NC_029120: LygF; NCTC9098_01843; phage(gi985761265)1.19e-54Showinfo_outline
15947277..948617putative integrase/transposase; NCTC9098_018440.0Showinfo_outline
16complement(949144..949395)Qin prophage protein; NCTC9098_018450.0Showinfo_outline
17949957..950169antitoxin of the RelE-RelB toxin-antitoxin system and transcriptional repressor of relBEF; NCTC9098_018460.0Showinfo_outline
18950169..950456toxin of the RelE-RelB toxin-antitoxin system; NCTC9098_018470.0Showinfo_outline
19950528..950683PHAGE_Entero_933W_NC_000924: host killer protein; NCTC9098_01848; phage(gi9632541)1.17e-25Showinfo_outline
20950900..951151putative prophage protein; NCTC9098_018490.0Showinfo_outline
21951498..952547PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC9098_01850; phage(gi428782365)2.80e-140Showinfo_outline
22952561..953313PHAGE_Entero_mEp460_NC_019716: late gene regulator; NCTC9098_01851; phage(gi428782366)3.20e-177Showinfo_outline
23complement(953735..953947)cold shock-like protein CspF; NCTC9098_018520.0Showinfo_outline
24complement(955065..955184)Uncharacterised protein; NCTC9098_018540.0Showinfo_outline
25955226..955432PHAGE_Entero_mEp460_NC_019716: porin; NCTC9098_01855; phage(gi428782370)2.64e-40Showinfo_outline
26955437..955748PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC9098_01856; phage(gi428782371)5.21e-40Showinfo_outline
27955745..956278PHAGE_Entero_mEp460_NC_019716: endolysin; NCTC9098_01857; phage(gi428782372)1.35e-121Showinfo_outline
28956275..956772PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; NCTC9098_01858; phage(gi16765210)1.80e-62Showinfo_outline
29957576..957848Qin prophage protein; NCTC9098_018600.0Showinfo_outline
30958020..958193GnsA/GnsB family transcriptional regulator; NCTC9098_018610.0Showinfo_outline
31complement(958345..958776)PHAGE_Entero_lambda_NC_001416: putative envelope protein; NCTC9098_01862; phage(gi19263396)4.60e-84Showinfo_outline
32959077..959283PHAGE_Entero_DE3_NC_042057: membrane-associated initiation of head vertex; predicted; phage protein; NCTC9098_01863(gi100034)4.73e-38Showinfo_outline
33complement(959304..959471)Uncharacterised protein; NCTC9098_018640.0Showinfo_outline
34complement(959690..961063)PROPHAGE_Escher_EDL933: putative transposase; NCTC9098_01865; phage(gi15803516)1.66e-120Showinfo_outline
35961445..961972PHAGE_Entero_mEp460_NC_019716: terminase small subunit; NCTC9098_01866; phage(gi428782317)2.70e-26Showinfo_outline
36961981..964080PHAGE_Entero_mEp460_NC_019716: terminase large subunit; NCTC9098_01867; phage(gi428782318)0.0Showinfo_outline
37964077..964289PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC9098_01868; phage(gi428782319)9.56e-46Showinfo_outline
38964289..964603PHAGE_Entero_mEp460_NC_019716: portal protein; NCTC9098_01869; phage(gi428782320)1.56e-52Showinfo_outline
39964738..965799PHAGE_Entero_mEp460_NC_019716: portal protein; NCTC9098_01870; phage(gi428782320)0.0Showinfo_outline
40965744..967771PHAGE_Entero_mEp460_NC_019716: putative protease/scaffold protein; NCTC9098_01871; phage(gi428782321)0.0Showinfo_outline
41967858..968181PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC9098_01872; phage(gi428782322)5.55e-69Showinfo_outline
42968174..968449PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC9098_01873; phage(gi428782323)2.82e-62Showinfo_outline
43968461..969051PHAGE_Entero_mEp460_NC_019716: minor tail protein; NCTC9098_01874; phage(gi428782324)6.98e-108Showinfo_outline
44969048..969449PHAGE_Entero_mEp460_NC_019716: minor tail protein; NCTC9098_01875; phage(gi428782325)1.08e-94Showinfo_outline
45969460..969831PHAGE_Entero_mEp460_NC_019716: major tail protein; NCTC9098_01876; phage(gi428782326)4.81e-79Showinfo_outline
46969867..970202PHAGE_Entero_mEp460_NC_019716: major tail protein; NCTC9098_01877; phage(gi428782326)6.71e-57Showinfo_outline
47970263..970631PHAGE_Entero_mEp460_NC_019716: minor tail protein; NCTC9098_01878; phage(gi428782327)2.12e-76Showinfo_outline
48970669..970986PHAGE_Entero_mEp460_NC_019716: tail assembly protein; NCTC9098_01879; phage(gi428782328)9.32e-72Showinfo_outline
49970958..972910PHAGE_Entero_mEp460_NC_019716: tail length tape measure protein; NCTC9098_01880; phage(gi428782329)0.0Showinfo_outline
50972907..973782PHAGE_Entero_mEp460_NC_019716: tail length tape measure protein; NCTC9098_01881; phage(gi428782329)0.0Showinfo_outline
51973763..974023PHAGE_Entero_mEp460_NC_019716: tail length tape measure protein; NCTC9098_01882; phage(gi428782329)5.16e-52Showinfo_outline
52974023..974352PHAGE_Entero_mEp460_NC_019716: minor tail protein; NCTC9098_01883; phage(gi428782330)2.54e-77Showinfo_outline
53974362..974565PHAGE_Entero_mEp460_NC_019716: minor tail protein; NCTC9098_01884; phage(gi428782331)7.38e-40Showinfo_outline
54974619..975059PHAGE_Entero_mEp460_NC_019716: minor tail protein; NCTC9098_01885; phage(gi428782331)1.83e-105Showinfo_outline
55975065..975808PHAGE_Entero_mEp460_NC_019716: tail fiber component; NCTC9098_01886; phage(gi428782332)8.79e-180Showinfo_outline
56975805..976353PHAGE_Entero_mEp460_NC_019716: tail assembly protein; NCTC9098_01887; phage(gi428782333)1.32e-121Showinfo_outline
57976414..979827PHAGE_Entero_mEp460_NC_019716: host specificity protein; NCTC9098_01888; phage(gi428782334)0.0Showinfo_outline
58979897..980496PHAGE_Entero_mEp460_NC_019716: Lom protein; NCTC9098_01889; phage(gi428782335)4.24e-136Showinfo_outline
59980561..983227PHAGE_Entero_HK629_NC_019711: tail fiber protein; NCTC9098_01890; phage(gi428782034)2.52e-105Showinfo_outline
60983295..983522PROPHAGE_Escher_MG1655: Qin prophage; predicted side tail fibre assembly protein; NCTC9098_01891; phage(gi16129506)1.74e-34Showinfo_outline
61complement(984195..984533)PHAGE_Salmon_SJ46_NC_031129: thymidylate synthetase; NCTC9098_01893; phage(gi100061)9.16e-14Showinfo_outline
62complement(984625..984786)putative DNA-invertase; NCTC9098_018940.0Showinfo_outline
63complement(985104..985337)PHAGE_Salmon_118970_sal3_NC_031940: base plate hub; NCTC9098_01895; phage(gi100103)9.57e-06Showinfo_outline
64986123..987406PHAGE_Burkho_phi1026b_NC_005284: gp59; NCTC9098_01896; phage(gi38707949)7.81e-28Showinfo_outline
65987495..988610putative sugar dehydrogenase; NCTC9098_018970.0Showinfo_outline
66988626..988955putative sugar dehydrogenase; NCTC9098_018980.0Showinfo_outline
67complement(988990..989193)PHAGE_Salmon_SSU5_NC_018843: putative selenium-binding protein YdfZ; NCTC9098_01899; phage(gi410491512)4.86e-18Showinfo_outline
68complement(989371..990057)GntR family transcriptional regulator; NCTC9098_019000.0Showinfo_outline
69complement(990146..990892)PHAGE_Prochl_P_TIM68_NC_028955: hypothetical protein; NCTC9098_01901; phage(gi971760361)8.52e-10Showinfo_outline
701005090..1005101attR0.0Showinfo_outline

Region 7, total 26 CDS

#CDS PositionBLAST HitE-ValueSequence
11433665..1433676attL0.0Showinfo_outline
21440662..1442032PHAGE_Gordon_Ghobes_NC_031028: DNA polymerase; NCTC9098_02333; phage(gi100036)2.39e-06Showinfo_outline
31442200..1442871two-component response regulator; NCTC9098_023340.0Showinfo_outline
41442871..1444331two-component sensor kinase; NCTC9098_023350.0Showinfo_outline
5complement(1444933..1445214)putative prophage protein; NCTC9098_023360.0Showinfo_outline
6complement(1445470..1446012)PHAGE_Entero_DE3_NC_042057: RecA-like recombination protein; NCTC9098_02337; phage(gi100035)3.66e-27Showinfo_outline
7complement(1446218..1446631)putative head-tail preconnector protein from prophage; NCTC9098_023380.0Showinfo_outline
8complement(1446644..1446979)PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head decoration protein; Lambda gpD homolog; NCTC9098_02339; phage(gi169257231)1.80e-09Showinfo_outline
9complement(1446992..1448047)PHAGE_Entero_DE3_NC_042057: clamp-loader subunit; NCTC9098_02340; phage(gi100041)2.73e-85Showinfo_outline
10complement(1448047..1448253)putative prophage protein; NCTC9098_023410.0Showinfo_outline
11complement(1448505..1448729)putative prophage protein; NCTC9098_023420.0Showinfo_outline
12complement(1448856..1449128)PHAGE_Salmon_SP_058_NC_021772: hypothetical protein; NCTC9098_02343; phage(gi526003529)3.34e-05Showinfo_outline
13complement(1449139..1449549)PHAGE_Staphy_Ipla88_NC_011614: putative ssDNA binding protein; NCTC9098_02344; phage(gi215401185)8.33e-10Showinfo_outline
14complement(1449546..1449797)putative prophage protein; NCTC9098_023450.0Showinfo_outline
15complement(1449998..1451398)PHAGE_Mycoba_Baee_NC_028742: primase/helicase; NCTC9098_02346; phage(gi970579967)9.80e-33Showinfo_outline
16complement(1451395..1451694)putative prophage protein; NCTC9098_023470.0Showinfo_outline
17complement(1451700..1451933)putative prophage protein; NCTC9098_023480.0Showinfo_outline
18complement(1451926..1452159)putative prophage protein; NCTC9098_023490.0Showinfo_outline
19complement(1452152..1452391)putative prophage protein; NCTC9098_023500.0Showinfo_outline
20complement(1452381..1452593)putative prophage protein; NCTC9098_023510.0Showinfo_outline
21complement(1452586..1453530)putative prophage protein; NCTC9098_023520.0Showinfo_outline
221454003..1454014attR0.0Showinfo_outline
23complement(1454141..1455370)PHAGE_Salmon_vB_SosS_Oslo_NC_018279: integrase; NCTC9098_02353; phage(gi399528791)4.37e-68Showinfo_outline
241455619..1456740cupin superfamily protein family; NCTC9098_023540.0Showinfo_outline
25complement(1456886..1458115)PHAGE_Brevib_Jenst_NC_028805: putative peptidase M20; NCTC9098_02355; phage(gi971745009)1.60e-05Showinfo_outline
261458365..1459501PHAGE_Bacill_G_NC_023719: gp245; NCTC9098_02356; phage(gi593777701)1.38e-34Showinfo_outline

Region 8, total 28 CDS

#CDS PositionBLAST HitE-ValueSequence
11455325..1455336attL0.0Showinfo_outline
2complement(1462210..1465611)PHAGE_Entero_9g_NC_024146: side tail fiber; NCTC9098_02361; phage(gi640885143)0.0Showinfo_outline
3complement(1465676..1466275)PHAGE_Entero_mEp460_NC_019716: Lom protein; NCTC9098_02362; phage(gi428782335)9.68e-124Showinfo_outline
4complement(1466539..1469823)PHAGE_Entero_DE3_NC_042057: recombination endonuclease subunit; NCTC9098_02363; phage(gi100054)0.0Showinfo_outline
5complement(1469883..1470455)PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9098_02364; phage(gi100053)1.33e-130Showinfo_outline
6complement(1470452..1471195)PHAGE_Entero_mEp460_NC_019716: tail fiber component; NCTC9098_02365; phage(gi428782332)1.55e-174Showinfo_outline
7complement(1471200..1471898)PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9098_02366; phage(gi100051)7.09e-171Showinfo_outline
8complement(1471898..1472227)PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9098_02367; phage(gi100050)3.85e-75Showinfo_outline
9complement(1472224..1474785)PHAGE_Entero_DE3_NC_042057: RNA polymerase sigma factor; NCTC9098_02368; phage(gi100049)0.0Showinfo_outline
10complement(1474778..1475212)PHAGE_Entero_DE3_NC_042057: rnaseH; NCTC9098_02369; phage(gi100048)1.06e-101Showinfo_outline
11complement(1475194..1475616)PHAGE_Entero_DE3_NC_042057: dsDNA binding protein; NCTC9098_02370; phage(gi100047)2.34e-101Showinfo_outline
12complement(1475632..1476372)PHAGE_Entero_DE3_NC_042057: late promoter transcription; NCTC9098_02371; phage(gi100046)9.94e-176Showinfo_outline
13complement(1476380..1476775)PHAGE_Entero_DE3_NC_042057: loader of DNA helicase; NCTC9098_02372; phage(gi100045)2.66e-90Showinfo_outline
14complement(1476772..1477350)PHAGE_Entero_DE3_NC_042057: ssDNA binding protein; NCTC9098_02373; phage(gi100044)1.78e-131Showinfo_outline
15complement(1477362..1477715)PHAGE_Entero_DE3_NC_042057: RNA polymerase binding protein; NCTC9098_02374; phage(gi100043)2.06e-78Showinfo_outline
16complement(1477727..1478125)PHAGE_Entero_DE3_NC_042057: sliding clamp DNA polymerase; NCTC9098_02375; phage(gi100042)2.74e-78Showinfo_outline
17complement(1478167..1479192)PHAGE_Entero_DE3_NC_042057: clamp-loader subunit; NCTC9098_02376; phage(gi100041)0.0Showinfo_outline
18complement(1479248..1479580)PHAGE_Entero_DE3_NC_042057: clamp-loader subunit; NCTC9098_02377; phage(gi100040)5.54e-71Showinfo_outline
19complement(1479590..1480909)PHAGE_Entero_DE3_NC_042057: RegA; NCTC9098_02378; phage(gi100039)0.0Showinfo_outline
20complement(1480890..1482614)PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9098_02379; phage(gi100038)0.0Showinfo_outline
21complement(1482611..1484536)PHAGE_Entero_DE3_NC_042057: DNA polymerase; NCTC9098_02380; phage(gi100036)0.0Showinfo_outline
22complement(1484511..1485056)PHAGE_Entero_DE3_NC_042057: RecA-like recombination protein; NCTC9098_02381; phage(gi100035)3.88e-129Showinfo_outline
23complement(1485458..1485862)Uncharacterised protein; NCTC9098_023820.0Showinfo_outline
24complement(1485998..1486222)Uncharacterised protein; NCTC9098_023830.0Showinfo_outline
25complement(1486466..1487119)PHAGE_Shigel_Sf6_NC_005344: putative transposase OrfB; NCTC9098_02384; phage(gi41057343)1.04e-163Showinfo_outline
26complement(1487332..1487634)PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; NCTC9098_02385; phage(gi24373865)6.33e-10Showinfo_outline
271487418..1487429attR0.0Showinfo_outline
281487795..1488958PHAGE_Shigel_Stx_NC_029120: integrase; NCTC9098_02386; phage(gi985761248)0.0Showinfo_outline

Region 9, total 8 CDS

#CDS PositionBLAST HitE-ValueSequence
14270882..4271673PHAGE_Prochl_P_TIM68_NC_028955: hypothetical protein; NCTC9098_05177; phage(gi971760361)1.09e-08Showinfo_outline
2complement(4271715..4273088)PROPHAGE_Escher_EDL933: putative transposase; NCTC9098_05178; phage(gi15803516)1.08e-121Showinfo_outline
34273418..4274434thiosulfate ABC transporter, substrate-binding protein; NCTC9098_051790.0Showinfo_outline
44274434..4275267PHAGE_Ralsto_RP12_NC_041911: tail completion and sheath stabilizer protein; NCTC9098_05180; phage(gi100192)1.46e-06Showinfo_outline
54275267..4276136sulfate ABC transporter, permease protein; NCTC9098_051810.0Showinfo_outline
64276133..4276615PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; NCTC9098_05182; phage(gi371496158)7.32e-18Showinfo_outline
74276566..4277231PHAGE_Bacill_G_NC_023719: gp245; NCTC9098_05183; phage(gi593777701)1.52e-09Showinfo_outline
84277365..4278276PHAGE_Lactoc_P087_NC_012663: putative cysteine synthase; NCTC9098_05184; phage(gi229605000)2.65e-59Showinfo_outline

Region 10, total 82 CDS

#CDS PositionBLAST HitE-ValueSequence
1complement(4332766..4334199)PHAGE_Bacill_SP_10_NC_019487: levanase; NCTC9098_05237; phage(gi418489513)1.13e-30Showinfo_outline
24334415..4335329aminoimidazole riboside kinase; NCTC9098_052380.0Showinfo_outline
34335401..4336648galactoside permease; NCTC9098_052390.0Showinfo_outline
4complement(4337177..4337377)PHAGE_Entero_HK633_NC_019719: hypothetical protein; NCTC9098_05240; phage(gi428782548)5.50e-44Showinfo_outline
54337397..4337412attL0.0Showinfo_outline
6complement(4337509..4337688)PHAGE_Entero_UAB_Phi20_NC_031019: recombination endonuclease subunit; NCTC9098_05241; phage(gi100054)1.23e-34Showinfo_outline
7complement(4337785..4338855)PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; NCTC9098_05242; phage(gi100093)2.38e-135Showinfo_outline
8complement(4338857..4339627)PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; NCTC9098_05243; phage(gi157165992)0.0Showinfo_outline
9complement(4339624..4339845)PHAGE_Escher_PA28_NC_041935: hypothetical protein; NCTC9098_05244; phage(gi100016)4.97e-45Showinfo_outline
10complement(4340237..4340428)PHAGE_Stx2_c_1717_NC_011357: hypothetical protein; NCTC9098_05245; phage(gi209447135)5.37e-39Showinfo_outline
11complement(4340401..4340583)PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9098_05246; phage(gi100011)1.03e-36Showinfo_outline
12complement(4340580..4341260)PHAGE_Entero_YYZ_2008_NC_011356: putative exonuclease; NCTC9098_05247; phage(gi209427739)3.25e-170Showinfo_outline
13complement(4341257..4342042)PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9098_05248; phage(gi100013)0.0Showinfo_outline
14complement(4342048..4342344)PHAGE_Escher_PA28_NC_041935: DNA helicase; NCTC9098_05249; phage(gi100021)4.29e-67Showinfo_outline
15complement(4342420..4342563)PHAGE_Stx2_c_86_NC_008464: putative host killing protein Kil; NCTC9098_05250; phage(gi116222047)7.07e-28Showinfo_outline
16complement(4342769..4343137)PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9098_05252; phage(gi100017)2.15e-84Showinfo_outline
17complement(4343288..4343758)PHAGE_Escher_PA28_NC_041935: DNA primase subunit; NCTC9098_05253; phage(gi100025)1.35e-114Showinfo_outline
18complement(4343817..4344200)PHAGE_Entero_933W_NC_000924: antitermination protein N; NCTC9098_05254; phage(gi9632486)5.02e-90Showinfo_outline
19complement(4344689..4344853)PHAGE_Entero_933W_NC_000924: hypothetical protein; NCTC9098_05255; phage(gi9632487)4.59e-30Showinfo_outline
20complement(4344856..4345902)PHAGE_Entero_933W_NC_000924: serine/threonine kinase; NCTC9098_05256; phage(gi9632488)0.0Showinfo_outline
21complement(4345896..4346357)PHAGE_Entero_933W_NC_000924: hypothetical protein; NCTC9098_05257; phage(gi9632489)1.40e-106Showinfo_outline
22complement(4346425..4346766)PHAGE_Stx2_c_86_NC_008464: hypothetical protein; NCTC9098_05258; phage(gi116222054)1.88e-81Showinfo_outline
23complement(4346827..4347534)PHAGE_Entero_933W_NC_000924: repressor protein CI; NCTC9098_05259; phage(gi9632491)9.09e-175Showinfo_outline
244347613..4347840PHAGE_Entero_933W_NC_000924: regulatory protein Cro; NCTC9098_05260; phage(gi9632492)1.54e-48Showinfo_outline
254347979..4348275PHAGE_Escher_PA28_NC_041935: hypothetical protein; NCTC9098_05261; phage(gi100030)1.02e-66Showinfo_outline
264348308..4348427PHAGE_Escher_PA28_NC_041935: hypothetical protein; NCTC9098_05262; phage(gi100031)1.08e-13Showinfo_outline
274349723..4350178PHAGE_Escher_PA28_NC_041935: hypothetical protein; NCTC9098_05264; phage(gi100031)2.53e-66Showinfo_outline
284350118..4350492PHAGE_Entero_DE3_NC_042057: DCTP pyrophosphatase; NCTC9098_05265; phage(gi100024)1.06e-86Showinfo_outline
294350489..4351190PHAGE_Escher_PA28_NC_041935: hypothetical protein; NCTC9098_05266; phage(gi100032)4.73e-171Showinfo_outline
304351187..4351477PHAGE_Escher_PA28_NC_041935: replication and recombination DNA helicase; NCTC9098_05267; phage(gi100033)3.17e-60Showinfo_outline
314351774..4352130PHAGE_Entero_mEp213_NC_019720: hypothetical protein; NCTC9098_05268; phage(gi428782648)7.41e-77Showinfo_outline
324352102..4352512PHAGE_Escher_HK75_NC_016160: NinB; NCTC9098_05269; phage(gi356870721)2.51e-96Showinfo_outline
334352688..4353089PHAGE_Escher_PA28_NC_041935: clamp-loader subunit; NCTC9098_05270; phage(gi100041)1.36e-96Showinfo_outline
344353049..4353258PHAGE_Escher_PA28_NC_041935: sliding clamp DNA polymerase; NCTC9098_05271; phage(gi100042)2.99e-42Showinfo_outline
354353251..4353973PHAGE_Escher_PA28_NC_041935: RNA polymerase binding protein; NCTC9098_05272; phage(gi100043)1.04e-174Showinfo_outline
364353973..4354578PHAGE_Entero_YYZ_2008_NC_011356: putative recombination endonuclease; NCTC9098_05273; phage(gi209427761)1.62e-147Showinfo_outline
374354575..4354769PHAGE_Escher_PA28_NC_041935: loader of DNA helicase; NCTC9098_05274; phage(gi100045)2.09e-37Showinfo_outline
384354720..4355196PHAGE_Entero_933W_NC_000924: antitermination protein Q; NCTC9098_05275; phage(gi9632505)3.35e-109Showinfo_outline
394355639..4355714tRNA0.0Showinfo_outline
404355724..4355800tRNA0.0Showinfo_outline
414355814..4355890tRNA0.0Showinfo_outline
42complement(4356028..4357401)PROPHAGE_Escher_EDL933: putative transposase; NCTC9098_05279; phage(gi15803516)1.08e-121Showinfo_outline
434357939..4359789PHAGE_Entero_YYZ_2008_NC_011356: hypothetical protein; NCTC9098_05281; phage(gi209427766)0.0Showinfo_outline
444360238..4360444PHAGE_Stx2_c_1717_NC_011357: holin protein S-like protein; NCTC9098_05282; phage(gi209447171)2.21e-42Showinfo_outline
454360444..4360941PHAGE_Stx2_c_1717_NC_011357: phage-related lysozyme; NCTC9098_05283; phage(gi209447172)9.08e-120Showinfo_outline
464360938..4361375PHAGE_Stx2_c_1717_NC_011357: putative Rz lysis protein; NCTC9098_05284; phage(gi209447173)3.81e-102Showinfo_outline
474361525..4362142PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; NCTC9098_05285; phage(gi100022)5.52e-108Showinfo_outline
484362919..4363239prophage Qin DNA packaging protein NU1-like protein; NCTC9098_052860.0Showinfo_outline
494363205..4363429PHAGE_Entero_DE3_NC_042057: RecA-like recombination protein; NCTC9098_05287; phage(gi100035)2.63e-13Showinfo_outline
504363401..4365329PHAGE_Entero_DE3_NC_042057: DNA polymerase; NCTC9098_05288; phage(gi100036)0.0Showinfo_outline
514365313..4365519PHAGE_Entero_HK225_NC_019717: head-tail connector gpW; NCTC9098_05289; phage(gi428782379)1.09e-17Showinfo_outline
524365516..4367108PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9098_05290; phage(gi100038)0.0Showinfo_outline
534367098..4368603PHAGE_Entero_DE3_NC_042057: RegA; NCTC9098_05291; phage(gi100039)7.43e-135Showinfo_outline
544368640..4368987PHAGE_Entero_DE3_NC_042057: clamp-loader subunit; NCTC9098_05292; phage(gi100040)1.31e-29Showinfo_outline
554369045..4370073PHAGE_Entero_DE3_NC_042057: clamp-loader subunit; NCTC9098_05293; phage(gi100041)2.65e-150Showinfo_outline
564370125..4370499PHAGE_Entero_HK225_NC_019717: head assembly protein Fi; NCTC9098_05294; phage(gi428782384)3.04e-05Showinfo_outline
574370492..4370845PHAGE_Entero_DE3_NC_042057: RNA polymerase binding protein; NCTC9098_05295; phage(gi100043)1.63e-48Showinfo_outline
584370857..4371435PHAGE_Entero_DE3_NC_042057: ssDNA binding protein; NCTC9098_05296; phage(gi100044)9.91e-131Showinfo_outline
594371432..4371827PHAGE_Entero_DE3_NC_042057: loader of DNA helicase; NCTC9098_05297; phage(gi100045)2.84e-90Showinfo_outline
604371835..4372575PHAGE_Entero_DE3_NC_042057: late promoter transcription; NCTC9098_05298; phage(gi100046)2.59e-174Showinfo_outline
614372591..4373013PHAGE_Entero_DE3_NC_042057: dsDNA binding protein; NCTC9098_05299; phage(gi100047)1.37e-98Showinfo_outline
624372995..4373429PHAGE_Entero_DE3_NC_042057: rnaseH; NCTC9098_05300; phage(gi100048)5.68e-101Showinfo_outline
634373422..4375743PHAGE_Entero_DE3_NC_042057: RNA polymerase sigma factor; NCTC9098_05301; phage(gi100049)0.0Showinfo_outline
644375743..4375982PHAGE_Entero_DE3_NC_042057: RNA polymerase sigma factor; NCTC9098_05302; phage(gi100049)6.08e-32Showinfo_outline
654375979..4376308PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9098_05303; phage(gi100050)8.02e-68Showinfo_outline
664376308..4377006PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9098_05304; phage(gi100051)5.54e-170Showinfo_outline
674377012..4377755PHAGE_Entero_mEp460_NC_019716: tail fiber component; NCTC9098_05305; phage(gi428782332)0.0Showinfo_outline
684377752..4378312PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9098_05306; phage(gi100053)3.45e-80Showinfo_outline
694378383..4379078PHAGE_Entero_DE3_NC_042057: recombination endonuclease subunit; NCTC9098_05307; phage(gi100054)6.91e-151Showinfo_outline
704379075..4379734PHAGE_Entero_DE3_NC_042057: recombination endonuclease subunit; NCTC9098_05308; phage(gi100054)1.31e-151Showinfo_outline
714379764..4380375PHAGE_Entero_DE3_NC_042057: recombination endonuclease subunit; NCTC9098_05309; phage(gi100054)3.03e-101Showinfo_outline
724380329..4381843PHAGE_Entero_DE3_NC_042057: recombination endonuclease subunit; NCTC9098_05310; phage(gi100054)0.0Showinfo_outline
734381859..4382173PHAGE_Entero_mEp460_NC_019716: Lom protein; NCTC9098_05311; phage(gi428782335)6.65e-52Showinfo_outline
744382193..4382447PHAGE_Entero_YYZ_2008_NC_011356: putative outer membrane protein Lom precursor; NCTC9098_05312; phage(gi209427792)1.08e-53Showinfo_outline
754382512..4383825PROPHAGE_Escher_Sakai: putative tail fiber protein; NCTC9098_05313; phage(gi15832195)0.0Showinfo_outline
764383827..4384096PHAGE_Escher_PA2_NC_028449: tail fiber protein; NCTC9098_05314; phage(gi953358107)4.95e-52Showinfo_outline
774384273..4385253PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; NCTC9098_05315; phage(gi23505470)2.30e-111Showinfo_outline
784385287..4386306T3SS secreted effector NleC-like protein; NCTC9098_053160.0Showinfo_outline
794387405..4387635PHAGE_Entero_cdtI_NC_009514: hypothetical protein; NCTC9098_05318; phage(gi148609405)2.50e-38Showinfo_outline
804388102..4388212Uncharacterised protein; NCTC9098_053190.0Showinfo_outline
81complement(4389115..4390221)PHAGE_Entero_HK633_NC_019719: integrase; NCTC9098_05320; phage(gi428782545)0.0Showinfo_outline
824390397..4390412attR0.0Showinfo_outline
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Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)

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Length: 4390918 bps
Phages: 10
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Lysis
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Fiber Protein
Plate Protein
tRNA

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