Submission Results

Sequence Name: Not Available

GenBank Accession Number: UGDU01000003.1

GenInfo (GI) Number: 0000000000

Download Results: UGDU01000003.1.PHASTER.zip

gi|00000000|ref|UGDU01000003.1| Escherichia coli strain NCTC9109 genome assembly, contig: 5016520, gc%: 50.66%

Download summary as .txt file: summary.txt file_download

Total: 12 prophage regions have been identified, of which 6 regions are intact, 4 regions are incomplete, and 2 regions are questionable.

RegionRegion LengthCompletenessScore# Total ProteinsRegion PositionMost Common PhageGC %Details
113.3Kbquestionable851445906-59298 info_outlinePHAGE_Entero_P4_NC_001609(8)49.29%Show info_outline
28.2Kbincomplete309437796-445996 info_outlinePHAGE_Entero_I2_2_NC_001332(2)49.65%Show info_outline
349.1Kbintact150651291154-1340303 info_outlinePHAGE_Salmon_SEN34_NC_028699(25)49.80%Show info_outline
457.6Kbintact150751937964-1995653 info_outlinePHAGE_Entero_Sf101_NC_027398(29)46.48%Show info_outline
518.2Kbincomplete30122434482-2452697 info_outlinePHAGE_Entero_YYZ_2008_NC_011356(2)45.55%Show info_outline
635.3Kbintact100402447950-2483328 info_outlinePHAGE_Entero_DE3_NC_042057(20)52.53%Show info_outline
747.6Kbintact150452788299-2835936 info_outlinePHAGE_Salmon_Fels_2_NC_010463(37)50.26%Show info_outline
811.3Kbincomplete30123496722-3508117 info_outlinePHAGE_Entero_I2_2_NC_001332(2)48.60%Show info_outline
952.2Kbquestionable90703553606-3605903 info_outlinePHAGE_Entero_lambda_NC_001416(23)50.42%Show info_outline
1048.5Kbintact150614210238-4258825 info_outlinePHAGE_Entero_cdtI_NC_009514(14)49.57%Show info_outline
1115.3Kbintact107174355268-4370573 info_outlinePHAGE_Entero_P4_NC_001609(10)49.82%Show info_outline
1216.4Kbincomplete60224637411-4653896 info_outlinePHAGE_Burkho_BcepMu_NC_005882(16)48.84%Show info_outline
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Region: The number assigned to the region.
Region Length: The length of the sequence of that region (in bp).
Completeness: A prediction of whether the region contains a intact or incomplete prophage based on the above criteria.
Score: The score of the region based on the above criteria.
# Total Proteins: The number of ORFs present in the region.
Region Position: The start and end positions of the region on the bacterial chromosome.
Most Common Phage: The phage(s) with the highest number of proteins most similar to those in the region.
GC %: The percentage of GC nucleotides of the region.

Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:

  1. If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
Method 2:
  1. If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
Method 3:
  1. If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
  2. If the size of the region is greater than 30 Kb, the score will be increased by 10.
  3. If there are at least 40 proteins in the region, the score will be increased by 10.
  4. If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
Compared the total score of method 2 with the total score of method 3, the bigger one is chosen as the total score of the region.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.

gi|00000000|ref|UGDU01000003.1| Escherichia coli strain NCTC9109 genome assembly, contig: 5016520, gc%: 50.66%

Download details as .txt file: detail.txt file_download

Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File

Region 1, total 16 CDS

#CDS PositionBLAST HitE-ValueSequence
145906..45918attL0.0Showinfo_outline
2complement(46395..48728)PHAGE_Entero_P4_NC_001609: DNA primase; NCTC9109_00188; phage(gi9627512)0.0Showinfo_outline
3complement(48743..49063)PHAGE_Entero_P4_NC_001609: hypothetical protein; NCTC9109_00189; phage(gi9627513)1.19e-71Showinfo_outline
4complement(49199..49654)PHAGE_Entero_P4_NC_001609: hypothetical protein; NCTC9109_00190; phage(gi9627514)2.67e-107Showinfo_outline
5complement(49647..49934)PHAGE_Entero_P4_NC_001609: helper derepression protein; NCTC9109_00191; phage(gi9627515)1.22e-63Showinfo_outline
6complement(50523..50789)PHAGE_Entero_P4_NC_001609: transcriptional regulator; NCTC9109_00194; phage(gi9627517)1.12e-59Showinfo_outline
751342..51674PHAGE_Entero_P4_NC_001609: head size determination protein sid; NCTC9109_00195; phage(gi9627518)5.93e-68Showinfo_outline
851756..52928PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; NCTC9109_00196; phage(gi557307612)0.0Showinfo_outline
952928..53725PROPHAGE_Escher_CFT073: transposase/IS protein; NCTC9109_00197; phage(gi26248359)2.01e-70Showinfo_outline
1053773..54210PHAGE_Entero_P4_NC_001609: head size determination protein sid; NCTC9109_00198; phage(gi9627518)2.61e-97Showinfo_outline
1154207..54707PHAGE_Entero_P4_NC_001609: transactivation protein; NCTC9109_00199; phage(gi9627519)4.97e-117Showinfo_outline
1254781..55353PHAGE_Entero_P4_NC_001609: amber mutation-suppressing protein; NCTC9109_00200; phage(gi9627520)3.19e-136Showinfo_outline
13complement(55664..56086)Uncharacterised protein; NCTC9109_002010.0Showinfo_outline
14complement(56083..57954)PHAGE_Gordon_Mahdia_NC_042089: membrane-associated initiation of head vertex; NCTC9109_00202; phage(gi100034)4.05e-15Showinfo_outline
15complement(57964..59127)PROPHAGE_Escher_CFT073: putative prophage integrase; NCTC9109_00203; phage(gi26250313)0.0Showinfo_outline
1659298..59310attR0.0Showinfo_outline

Region 2, total 9 CDS

#CDS PositionBLAST HitE-ValueSequence
1437796..438992PHAGE_Vibrio_CTX_NC_015209: RstA; NCTC9109_00556; phage(gi332672300)9.29e-55Showinfo_outline
2439002..439337Uncharacterised protein; NCTC9109_005570.0Showinfo_outline
3439631..439906Uncharacterised protein; NCTC9109_005580.0Showinfo_outline
4439962..441236PHAGE_Entero_If1_NC_001954: attachment protein; NCTC9109_00559; phage(gi9630752)3.62e-05Showinfo_outline
5441239..441598Uncharacterised protein; NCTC9109_005600.0Showinfo_outline
6441606..442862PHAGE_Entero_I2_2_NC_001332: assembly protein; NCTC9109_00561; phage(gi9625390)1.00e-20Showinfo_outline
7442872..443945PHAGE_Entero_I2_2_NC_001332: phage assembly protein; NCTC9109_00562; phage(gi9625382)5.59e-06Showinfo_outline
8444027..445199PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; NCTC9109_00563; phage(gi557307612)0.0Showinfo_outline
9445199..445996PROPHAGE_Escher_CFT073: transposase/IS protein; NCTC9109_00564; phage(gi26248359)2.01e-70Showinfo_outline

Region 3, total 67 CDS

#CDS PositionBLAST HitE-ValueSequence
11291154..1291171attL0.0Showinfo_outline
21291416..1292813integrase; NCTC9109_014250.0Showinfo_outline
3complement(1292810..1293010)Uncharacterised protein; NCTC9109_014260.0Showinfo_outline
4complement(1293007..1294401)PHAGE_Endosy_APSE_1_NC_000935: hypothetical protein; NCTC9109_01427; phage(gi9633588)0.0Showinfo_outline
51294436..1294756Uncharacterised protein; NCTC9109_014280.0Showinfo_outline
6complement(1294892..1295671)PHAGE_Burkho_BcepC6B_NC_005887: putative methyl transferase protein; NCTC9109_01429; phage(gi48697223)1.06e-36Showinfo_outline
7complement(1295644..1295937)PHAGE_Endosy_APSE_1_NC_000935: hypothetical protein; NCTC9109_01430; phage(gi9633591)1.86e-36Showinfo_outline
8complement(1295921..1296181)PHAGE_Entero_EcP1_NC_019485: hypothetical protein; NCTC9109_01431; phage(gi418489320)7.38e-20Showinfo_outline
9complement(1296178..1296393)Uncharacterised protein; NCTC9109_014320.0Showinfo_outline
10complement(1296399..1298462)PHAGE_Bordet_BPP_1_NC_005357: Bbp42; NCTC9109_01433; phage(gi41179402)0.0Showinfo_outline
111298509..1299138putative transmembrane protein; NCTC9109_014340.0Showinfo_outline
12complement(1299191..1299739)PHAGE_Bordet_BPP_1_NC_005357: Bbp40; NCTC9109_01435; phage(gi41179400)9.62e-87Showinfo_outline
13complement(1299755..1300786)PHAGE_Bacter_APSE_2_NC_011551: hypothetical protein; NCTC9109_01436; phage(gi212499745)2.45e-137Showinfo_outline
14complement(1300929..1301726)PROPHAGE_Escher_CFT073: transposase/IS protein; NCTC9109_01437; phage(gi26248359)2.01e-70Showinfo_outline
15complement(1301726..1302898)PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; NCTC9109_01438; phage(gi557307612)0.0Showinfo_outline
16complement(1302972..1303190)PHAGE_Bacter_APSE_2_NC_011551: hypothetical protein; NCTC9109_01439; phage(gi212499745)2.15e-18Showinfo_outline
17complement(1303193..1304095)PHAGE_Endosy_APSE_1_NC_000935: hypothetical protein; NCTC9109_01440; phage(gi9633600)3.67e-10Showinfo_outline
18complement(1304092..1304241)Uncharacterised protein; NCTC9109_014410.0Showinfo_outline
191304466..1304984PHAGE_Entero_HK446_NC_019714: hypothetical protein; NCTC9109_01442; phage(gi428782230)7.25e-52Showinfo_outline
20complement(1305412..1306086)PHAGE_Bacter_APSE_2_NC_011551: cI; NCTC9109_01443; phage(gi212499706)8.28e-69Showinfo_outline
211306228..1306428PHAGE_Endosy_APSE_1_NC_000935: putative Cro-like protein; NCTC9109_01444; phage(gi9633551)1.66e-12Showinfo_outline
221306432..1308693PHAGE_Salmon_FSLSP088_NC_021780: DR0530-like primase; NCTC9109_01445; phage(gi525972505)7.16e-19Showinfo_outline
231309009..1309239Uncharacterised protein; NCTC9109_014460.0Showinfo_outline
241309285..1309707PHAGE_Entero_phiP27_NC_003356: putative antitermination protein Q; NCTC9109_01447; phage(gi18249885)5.07e-54Showinfo_outline
251309739..1310080Uncharacterised protein; NCTC9109_014480.0Showinfo_outline
261310526..1310867PHAGE_Entero_SfV_NC_003444: holin; NCTC9109_01449; phage(gi19549036)1.71e-59Showinfo_outline
271310871..1311347PHAGE_Entero_SfV_NC_003444: lysin; NCTC9109_01450; phage(gi19549037)1.00e-110Showinfo_outline
281311331..1311855PHAGE_Entero_HK225_NC_019717: lysis protein Rz; NCTC9109_01451; phage(gi428782445)3.11e-58Showinfo_outline
291311917..1312489PHAGE_Pseudo_YMC11/07/P54_PAE_BP_NC_030909: RegA; NCTC9109_01452; phage(gi100039)5.80e-62Showinfo_outline
30complement(1312523..1312729)HEAT repeat; NCTC9109_014530.0Showinfo_outline
311312802..1314424PHAGE_Salmon_SEN34_NC_028699: terminase large subunit; NCTC9109_01454; phage(gi966201419)0.0Showinfo_outline
321314424..1315890PHAGE_Salmon_SEN34_NC_028699: putative portal protein; NCTC9109_01455; phage(gi966201420)0.0Showinfo_outline
331316078..1316515PHAGE_Salmon_SEN34_NC_028699: putative head morphogenesis protein; NCTC9109_01456; phage(gi966201421)2.31e-94Showinfo_outline
341316530..1317753PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC9109_01457; phage(gi966201422)0.0Showinfo_outline
351317757..1318263PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC9109_01458; phage(gi966201423)1.12e-89Showinfo_outline
361318275..1319216PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC9109_01459; phage(gi966201424)0.0Showinfo_outline
371319258..1319479PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC9109_01460; phage(gi966201425)9.34e-18Showinfo_outline
381319445..1319852PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC9109_01461; phage(gi966201426)1.22e-91Showinfo_outline
391319849..1320403PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC9109_01462; phage(gi966201427)8.97e-104Showinfo_outline
401320390..1320779PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC9109_01463; phage(gi966201428)1.72e-86Showinfo_outline
411320754..1321317PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC9109_01464; phage(gi966201429)5.82e-99Showinfo_outline
421321321..1322466PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC9109_01465; phage(gi966201430)3.69e-179Showinfo_outline
431322477..1322917PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC9109_01466; phage(gi966201431)5.58e-73Showinfo_outline
441322921..1323373PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC9109_01467; phage(gi966201432)2.53e-76Showinfo_outline
451323551..1325536PHAGE_Salmon_SEN34_NC_028699: tail tape measure protein; NCTC9109_01468; phage(gi966201433)0.0Showinfo_outline
461325536..1326123PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC9109_01469; phage(gi966201434)6.73e-116Showinfo_outline
471326123..1326425PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC9109_01470; phage(gi966201435)4.06e-63Showinfo_outline
481326428..1327489PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC9109_01471; phage(gi966201436)0.0Showinfo_outline
491327493..1327834PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC9109_01472; phage(gi966201437)5.20e-45Showinfo_outline
501327984..1328715Uncharacterised protein; NCTC9109_014730.0Showinfo_outline
511328715..1329143PHAGE_Acinet_Bphi_B1251_NC_019541: hypothetical protein; NCTC9109_01474; phage(gi423262025)1.09e-07Showinfo_outline
521329208..1329960PHAGE_Salmon_SEN34_NC_028699: baseplate assembly protein; NCTC9109_01475; phage(gi966201439)7.59e-114Showinfo_outline
531329960..1330313PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC9109_01476; phage(gi966201441)3.26e-63Showinfo_outline
541330313..1331512PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC9109_01477; phage(gi966201442)0.0Showinfo_outline
551331509..1332189PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC9109_01478; phage(gi966201443)1.75e-136Showinfo_outline
561332189..1332917PHAGE_Salmon_SEN34_NC_028699: tail fiber protein; NCTC9109_01479; phage(gi966201444)1.76e-33Showinfo_outline
571332922..1333365PHAGE_Shigel_SfIV_NC_022749: tail fiber assembly protein; NCTC9109_01480; phage(gi557307547)5.22e-28Showinfo_outline
58complement(1333337..1333930)PHAGE_Entero_HK106_NC_019768: tail fiber assembly protein; NCTC9109_01481; phage(gi428783304)4.69e-79Showinfo_outline
59complement(1333930..1334424)PHAGE_Entero_c_1_NC_019706: tail fiber; NCTC9109_01482; phage(gi428781757)7.48e-101Showinfo_outline
601334454..1334768PHAGE_Salmon_Fels_2_NC_010463: DNA-invertase; NCTC9109_01483; phage(gi169936026)1.88e-52Showinfo_outline
61complement(1334773..1335618)Uncharacterised protein; NCTC9109_014840.0Showinfo_outline
62complement(1335920..1336186)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC9109_01485; phage(gi966201448)1.51e-49Showinfo_outline
631336394..1336411attR0.0Showinfo_outline
64complement(1336497..1337345)RpiR-family transcriptional regulator; NCTC9109_014860.0Showinfo_outline
651337554..1338189HAD hydrolase YfhB; NCTC9109_014870.0Showinfo_outline
661338247..1338750PHAGE_Achrom_83_24_NC_028834: tRNA-specific adenosine deaminase; NCTC9109_01488; phage(gi971747971)3.25e-07Showinfo_outline
67complement(1338747..1340303)PHAGE_Bacill_BM5_NC_029069: hypothetical protein; NCTC9109_01489; phage(gi985757795)2.78e-11Showinfo_outline

Region 4, total 81 CDS

#CDS PositionBLAST HitE-ValueSequence
11937964..1937975attL0.0Showinfo_outline
21938289..1939185PHAGE_Entero_Sf101_NC_027398: integrase; NCTC9109_02035; phage(gi849122280)0.0Showinfo_outline
3complement(1939166..1939357)PHAGE_Entero_Sf101_NC_027398: hypothetical protein; NCTC9109_02036; phage(gi849122281)2.48e-40Showinfo_outline
4complement(1939753..1940052)PHAGE_Entero_933W_NC_000924: hypothetical protein; NCTC9109_02037; phage(gi9632469)3.28e-68Showinfo_outline
5complement(1940123..1940407)PHAGE_Entero_ST104_NC_005841: ORF6; NCTC9109_02038; phage(gi46358654)7.42e-57Showinfo_outline
6complement(1940400..1941395)PHAGE_Stx2_vB_EcoP_24B_NC_027984: hypothetical protein; NCTC9109_02039; phage(gi937456238)2.21e-138Showinfo_outline
7complement(1941382..1941636)PHAGE_Entero_EcP1_NC_019485: hypothetical protein; NCTC9109_02040; phage(gi418489320)1.38e-19Showinfo_outline
8complement(1941633..1942064)PHAGE_Entero_HK629_NC_019711: hypothetical protein; NCTC9109_02041; phage(gi428782046)4.03e-83Showinfo_outline
9complement(1942236..1942532)PHAGE_Entero_Sf101_NC_027398: anti-RecBCD protein; NCTC9109_02042; phage(gi849122287)4.87e-67Showinfo_outline
10complement(1942549..1943097)PHAGE_Entero_mEp235_NC_019708: exonuclease; NCTC9109_02043; phage(gi428781840)5.74e-134Showinfo_outline
11complement(1943106..1943585)PHAGE_Shigel_Sf6_NC_005344: gene 26 protein; NCTC9109_02044; phage(gi41057303)7.23e-114Showinfo_outline
12complement(1943595..1944068)PHAGE_Salmon_103203_sal5_NC_031946: membrane-associated initiation of head vertex; NCTC9109_02045; phage(gi100034)8.65e-88Showinfo_outline
13complement(1944384..1945181)PROPHAGE_Escher_CFT073: transposase/IS protein; NCTC9109_02046; phage(gi26248359)2.01e-70Showinfo_outline
14complement(1945181..1946353)PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; NCTC9109_02047; phage(gi557307612)0.0Showinfo_outline
15complement(1946440..1946910)PHAGE_Shigel_Sf6_NC_005344: gene 28 protein; NCTC9109_02048; phage(gi41057306)3.75e-109Showinfo_outline
16complement(1946919..1947089)PHAGE_Entero_Sf101_NC_027398: hypothetical protein; NCTC9109_02049; phage(gi849122290)5.88e-36Showinfo_outline
17complement(1947165..1947317)PHAGE_Entero_HK022_NC_002166: kil protein; NCTC9109_02050; phage(gi19343384)4.23e-29Showinfo_outline
18complement(1947302..1947433)PHAGE_Entero_Sf101_NC_027398: CIII protein; NCTC9109_02051; phage(gi849122293)3.86e-24Showinfo_outline
19complement(1947458..1948426)PHAGE_Entero_IME10_NC_019501: Orf53; NCTC9109_02052; phage(gi422934294)0.0Showinfo_outline
20complement(1948594..1948836)PHAGE_Salmon_STML_13_1_NC_042061: baseplate subunit; NCTC9109_02053; phage(gi100105)3.09e-27Showinfo_outline
21complement(1948864..1949064)PHAGE_Entero_Sf101_NC_027398: restriction inhibitor protein; NCTC9109_02054; phage(gi849122297)3.25e-42Showinfo_outline
22complement(1949134..1949460)PHAGE_Entero_Sf101_NC_027398: anti-termination protein N; NCTC9109_02055; phage(gi849122299)4.04e-74Showinfo_outline
23complement(1949840..1950244)PHAGE_Entero_Sf101_NC_027398: hypothetical protein; NCTC9109_02056; phage(gi849122300)3.68e-92Showinfo_outline
24complement(1950241..1950873)PHAGE_Entero_Sf101_NC_027398: repressor cI; NCTC9109_02057; phage(gi849122301)7.00e-152Showinfo_outline
251950977..1951192PHAGE_Entero_Sf101_NC_027398: Cro; NCTC9109_02058; phage(gi849122302)1.23e-45Showinfo_outline
261951312..1951605PHAGE_Entero_HK633_NC_019719: CII protein; NCTC9109_02059; phage(gi428782569)1.81e-64Showinfo_outline
271951638..1951784PHAGE_Entero_Sf101_NC_027398: hypothetical protein; NCTC9109_02060; phage(gi849122305)3.93e-28Showinfo_outline
281951777..1952637PHAGE_Entero_Sf101_NC_027398: replication protein O; NCTC9109_02061; phage(gi849122306)0.0Showinfo_outline
291952641..1952748PHAGE_Entero_ES18_NC_006949: gp60; NCTC9109_02062; phage(gi62362273)8.40e-17Showinfo_outline
301952745..1954625PHAGE_Entero_Sf101_NC_027398: hypothetical protein; NCTC9109_02063; phage(gi849122307)0.0Showinfo_outline
311954702..1954908PHAGE_Entero_mEp213_NC_019720: hypothetical protein; NCTC9109_02064; phage(gi428782647)2.93e-38Showinfo_outline
321954926..1955192PHAGE_Salmon_ST64T_NC_004348: hypothetical protein; NCTC9109_02065; phage(gi24371564)1.96e-15Showinfo_outline
331955195..1955437Uncharacterised protein; NCTC9109_020660.0Showinfo_outline
341955391..1955840PHAGE_Entero_YYZ_2008_NC_011356: putative recombination protein; NCTC9109_02067; phage(gi209427757)3.95e-105Showinfo_outline
351955837..1956364PHAGE_Entero_Sf101_NC_027398: DNA methylase; NCTC9109_02068; phage(gi849122310)2.19e-128Showinfo_outline
361956540..1956908PHAGE_Salmon_vB_SosS_Oslo_NC_018279: NinX protein; NCTC9109_02069; phage(gi399528826)2.71e-54Showinfo_outline
371956901..1957077PHAGE_Entero_Sf101_NC_027398: NinF protein; NCTC9109_02070; phage(gi849122313)7.46e-36Showinfo_outline
381957070..1957681PHAGE_Entero_HK544_NC_019767: NinG protein; NCTC9109_02071; phage(gi428783270)2.50e-147Showinfo_outline
391957678..1957884PHAGE_Entero_Sf101_NC_027398: NinH protein; NCTC9109_02072; phage(gi849122315)1.15e-42Showinfo_outline
401957862..1958533PHAGE_Shigel_Sf6_NC_005344: gene 58 protein; NCTC9109_02073; phage(gi41057331)2.40e-164Showinfo_outline
411958524..1959042PHAGE_Shigel_Sf6_NC_005344: gene 59 protein; NCTC9109_02074; phage(gi41057332)2.45e-125Showinfo_outline
421959106..1959180tRNA0.0Showinfo_outline
431959186..1959261tRNA0.0Showinfo_outline
441959504..1959827PHAGE_Entero_Sf101_NC_027398: holin; NCTC9109_02077; phage(gi849122319)1.64e-71Showinfo_outline
451959811..1960287PHAGE_Entero_Sf101_NC_027398: lysozyme; NCTC9109_02078; phage(gi849122321)6.12e-115Showinfo_outline
461960284..1960721PHAGE_Escher_HK75_NC_016160: Rz; NCTC9109_02079; phage(gi356870731)4.10e-99Showinfo_outline
471960718..1960861PHAGE_Entero_Sf101_NC_027398: hypothetical protein; NCTC9109_02080; phage(gi849122324)5.55e-25Showinfo_outline
481960943..1961422PHAGE_Entero_Bp4_NC_024142: hypothetical protein; NCTC9109_02081; phage(gi640884689)1.61e-38Showinfo_outline
491961726..1961968PHAGE_Entero_Sf101_NC_027398: hypothetical protein; NCTC9109_02082; phage(gi849122327)3.92e-51Showinfo_outline
501961971..1962363PHAGE_Entero_UAB_Phi20_NC_031019: DCTP pyrophosphatase; NCTC9109_02083; phage(gi100024)4.29e-86Showinfo_outline
511962484..1962927PHAGE_Acinet_LZ35_NC_031117: co-chaperonin for GroEL; NCTC9109_02084; phage(gi100075)2.78e-55Showinfo_outline
521962924..1964402PHAGE_Entero_Sf101_NC_027398: terminase large subunit; NCTC9109_02085; phage(gi849122264)0.0Showinfo_outline
531964404..1966602PHAGE_Entero_Sf101_NC_027398: portal protein; NCTC9109_02086; phage(gi849122265)0.0Showinfo_outline
541966693..1967586PHAGE_Entero_Sf101_NC_027398: scaffold protein; NCTC9109_02087; phage(gi849122266)0.0Showinfo_outline
551967605..1968858PHAGE_Entero_Sf101_NC_027398: coat protein; NCTC9109_02088; phage(gi849122267)0.0Showinfo_outline
561968900..1969076PHAGE_Entero_Sf101_NC_027398: hypothetical protein; NCTC9109_02089; phage(gi849122268)3.60e-36Showinfo_outline
571969069..1969530PHAGE_Entero_Sf101_NC_027398: DNA stabilization protein; NCTC9109_02090; phage(gi849122269)2.10e-108Showinfo_outline
581969540..1970958PHAGE_Entero_Sf101_NC_027398: DNA stabilization protein; NCTC9109_02091; phage(gi849122270)0.0Showinfo_outline
591970958..1971806PHAGE_Entero_UAB_Phi20_NC_031019: membrane-associated initiation of head vertex; NCTC9109_02092; phage(gi100034)9.78e-49Showinfo_outline
601971806..1972261PHAGE_Entero_Sf101_NC_027398: head assembly protein; NCTC9109_02093; phage(gi849122272)5.22e-109Showinfo_outline
611972264..1972590PHAGE_Entero_Sf101_NC_027398: DNA transfer protein; NCTC9109_02094; phage(gi849122273)2.09e-70Showinfo_outline
621972678..1972956PHAGE_Entero_Sf101_NC_027398: DNA transfer protein; NCTC9109_02095; phage(gi849122273)3.18e-52Showinfo_outline
631972966..1974354PHAGE_Salmon_ST64T_NC_004348: DNA transfer protein; NCTC9109_02096; phage(gi24371594)0.0Showinfo_outline
641974354..1976351PHAGE_Shigel_Sf6_NC_005344: gene 13 protein; NCTC9109_02097; phage(gi41057291)0.0Showinfo_outline
651976516..1978426PHAGE_Entero_Bp4_NC_024142: tail fiber protein; NCTC9109_02098; phage(gi640884661)8.86e-79Showinfo_outline
66complement(1978475..1979596)PHAGE_Salmon_BTP1_NC_042346: hypothetical protein; NCTC9109_02099; phage(gi100015)4.70e-16Showinfo_outline
671980007..1980018attR0.0Showinfo_outline
681980342..1981508PHAGE_Stx2_c_1717_NC_011357: penicillin-binding protein 6b; NCTC9109_02100; phage(gi209447203)0.0Showinfo_outline
691981627..1982100DNA gyrase inhibitory protein; NCTC9109_021010.0Showinfo_outline
701982298..1983356inner membrane protein; NCTC9109_021020.0Showinfo_outline
711983528..1983857putative alpha helix protein; NCTC9109_021030.0Showinfo_outline
72complement(1983958..1984401)propanediol utilization protein PduV; NCTC9109_021040.0Showinfo_outline
73complement(1984406..1984756)putative propanediol utilization polyhedral bodies PduU; NCTC9109_021050.0Showinfo_outline
741984883..1985650PilV-like protein; NCTC9109_021060.0Showinfo_outline
75complement(1985765..1986109)Uncharacterised protein; NCTC9109_021070.0Showinfo_outline
76complement(1986121..1986975)Uncharacterised protein; NCTC9109_021080.0Showinfo_outline
77complement(1986965..1987117)ATP-grasp ribosomal peptide maturase, SAV_5884 family; NCTC9109_021090.0Showinfo_outline
781987534..1987545attL0.0Showinfo_outline
791988236..1988487PHAGE_Clostr_phiMMP02_NC_019421: hypothetical protein; NCTC9109_02110; phage(gi414090415)3.03e-05Showinfo_outline
80complement(1988558..1989832)PROPHAGE_Shigel_301: putative P4-type integrase; NCTC9109_02111; phage(gi24114228)0.0Showinfo_outline
811995653..1995664attR0.0Showinfo_outline

Region 5, total 14 CDS

#CDS PositionBLAST HitE-ValueSequence
12434482..2435501PHAGE_Synech_S_SM2_NC_015279: zinc-containing alcohol dehydrogenase superfamily protein; NCTC9109_02563; phage(gi326781942)2.00e-18Showinfo_outline
22435462..2435474attL0.0Showinfo_outline
3complement(2435689..2436969)PHAGE_Entero_YYZ_2008_NC_011356: putative integrase; Qin; phage prophage; NCTC9109_02564(gi209427727)0.0Showinfo_outline
4complement(2437004..2437240)PHAGE_Entero_YYZ_2008_NC_011356: putative excisionase; NCTC9109_02565; phage(gi209427728)2.15e-19Showinfo_outline
5complement(2437328..2439799)PHAGE_Salmon_118970_sal3_NC_031940: baseplate hub subunit; NCTC9109_02566; phage(gi100107)3.64e-68Showinfo_outline
6complement(2439893..2440084)putative prophage protein; NCTC9109_025670.0Showinfo_outline
7complement(2440081..2440269)division inhibition protein; NCTC9109_025680.0Showinfo_outline
8complement(2440756..2441331)PHAGE_Entero_vB_EcoP_ACG_C91_NC_019403: hypothetical protein; NCTC9109_02570; phage(gi414087578)5.76e-05Showinfo_outline
9complement(2441333..2441488)PHAGE_Salico_CGphi29_NC_020844: hypothetical protein; NCTC9109_02571; phage(gi472340166)1.81e-11Showinfo_outline
10complement(2441681..2442139)PHAGE_Cronob_phiES15_NC_018454: putative transcriptional repressor DicA; NCTC9109_02572; phage(gi401817574)1.09e-34Showinfo_outline
112442166..2442393PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9109_02573; phage(gi100022)1.63e-12Showinfo_outline
122442377..2442898PHAGE_Pectob_ZF40_NC_019522: putative cII repressor; NCTC9109_02574; phage(gi422936652)3.27e-05Showinfo_outline
132442879..2443844PHAGE_Shigel_SfIV_NC_022749: replication protein; NCTC9109_02575; phage(gi557307567)9.17e-70Showinfo_outline
142452697..2452709attR0.0Showinfo_outline

Region 6, total 40 CDS

#CDS PositionBLAST HitE-ValueSequence
1complement(2447950..2448282)Qin prophage protein; NCTC9109_025810.0Showinfo_outline
22448815..2449054antitoxin of the RelE-RelB toxin-antitoxin system and transcriptional repressor of relBEF; NCTC9109_025820.0Showinfo_outline
32449054..2449341toxin of the RelE-RelB toxin-antitoxin system; NCTC9109_025830.0Showinfo_outline
42449413..2449568PHAGE_Entero_933W_NC_000924: host killer protein; NCTC9109_02584; phage(gi9632541)1.17e-25Showinfo_outline
52449785..2450036putative prophage protein; NCTC9109_025850.0Showinfo_outline
6complement(2450423..2451220)PROPHAGE_Escher_CFT073: transposase/IS protein; NCTC9109_02586; phage(gi26248359)2.01e-70Showinfo_outline
7complement(2451220..2452392)PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; NCTC9109_02587; phage(gi557307612)0.0Showinfo_outline
82452433..2453566PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; NCTC9109_02588; phage(gi557307571)1.79e-139Showinfo_outline
92453580..2454332PHAGE_Entero_SfV_NC_003444: antitermination protein Q; NCTC9109_02589; phage(gi19549033)2.04e-179Showinfo_outline
10complement(2455587..2455757)Uncharacterised protein; NCTC9109_025910.0Showinfo_outline
112455987..2456193PHAGE_Entero_mEp460_NC_019716: porin; NCTC9109_02592; phage(gi428782370)2.64e-40Showinfo_outline
122456198..2456749PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC9109_02593; phage(gi428782371)5.42e-49Showinfo_outline
13complement(2456697..2456957)Uncharacterised protein; NCTC9109_025940.0Showinfo_outline
142457071..2457604PHAGE_Entero_mEp460_NC_019716: endolysin; NCTC9109_02595; phage(gi428782372)7.33e-122Showinfo_outline
152457601..2458098PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; NCTC9109_02596; phage(gi16765210)5.82e-62Showinfo_outline
162459349..2459522GnsA/GnsB family transcriptional regulator; NCTC9109_025980.0Showinfo_outline
172459818..2460024PHAGE_Entero_DE3_NC_042057: membrane-associated initiation of head vertex; predicted; phage protein; NCTC9109_02599(gi100034)1.00e-31Showinfo_outline
182460858..2461403PHAGE_Entero_DE3_NC_042057: RecA-like recombination protein; NCTC9109_02600; phage(gi100035)1.46e-128Showinfo_outline
192461378..2463303PHAGE_Entero_DE3_NC_042057: DNA polymerase; NCTC9109_02601; phage(gi100036)0.0Showinfo_outline
202463300..2463506PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9109_02602; phage(gi100037)4.55e-43Showinfo_outline
212463503..2465104PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9109_02603; phage(gi100038)0.0Showinfo_outline
222465085..2466404PHAGE_Entero_DE3_NC_042057: RegA; NCTC9109_02604; phage(gi100039)0.0Showinfo_outline
232466408..2466746PHAGE_Entero_DE3_NC_042057: clamp-loader subunit; NCTC9109_02605; phage(gi100040)1.21e-72Showinfo_outline
242466802..2467827PHAGE_Entero_DE3_NC_042057: clamp-loader subunit; NCTC9109_02606; phage(gi100041)0.0Showinfo_outline
252467869..2468267PHAGE_Entero_DE3_NC_042057: sliding clamp DNA polymerase; NCTC9109_02607; phage(gi100042)2.96e-88Showinfo_outline
262468279..2468632PHAGE_Entero_DE3_NC_042057: RNA polymerase binding protein; NCTC9109_02608; phage(gi100043)2.93e-78Showinfo_outline
272468644..2469222PHAGE_Entero_DE3_NC_042057: ssDNA binding protein; NCTC9109_02609; phage(gi100044)6.31e-132Showinfo_outline
282469219..2469392PHAGE_Entero_DE3_NC_042057: loader of DNA helicase; NCTC9109_02610; phage(gi100045)4.92e-34Showinfo_outline
292469459..2469614PHAGE_Entero_DE3_NC_042057: loader of DNA helicase; NCTC9109_02611; phage(gi100045)6.03e-29Showinfo_outline
302469622..2470362PHAGE_Entero_DE3_NC_042057: late promoter transcription; NCTC9109_02612; phage(gi100046)2.01e-176Showinfo_outline
312470378..2470800PHAGE_Entero_DE3_NC_042057: dsDNA binding protein; NCTC9109_02613; phage(gi100047)2.34e-101Showinfo_outline
322470782..2471216PHAGE_Entero_DE3_NC_042057: rnaseH; NCTC9109_02614; phage(gi100048)2.50e-101Showinfo_outline
332471209..2473707PHAGE_Entero_DE3_NC_042057: RNA polymerase sigma factor; NCTC9109_02615; phage(gi100049)0.0Showinfo_outline
342473704..2474033PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9109_02616; phage(gi100050)5.12e-76Showinfo_outline
352474033..2474731PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9109_02617; phage(gi100051)1.31e-172Showinfo_outline
362474737..2475480PHAGE_Entero_mEp460_NC_019716: tail fiber component; NCTC9109_02618; phage(gi428782332)1.14e-179Showinfo_outline
372475477..2476049PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9109_02619; phage(gi100053)2.81e-131Showinfo_outline
382476110..2479523PHAGE_Entero_DE3_NC_042057: recombination endonuclease subunit; NCTC9109_02620; phage(gi100054)0.0Showinfo_outline
392479593..2480192PHAGE_Entero_YYZ_2008_NC_011356: putative outer membrane protein Lom precursor; NCTC9109_02621; phage(gi209427792)2.02e-138Showinfo_outline
402480257..2483328PROPHAGE_Escher_MG1655: Qin prophage; predicted side tail fibre assembly protein; NCTC9109_02622; phage(gi16129506)0.0Showinfo_outline

Region 7, total 47 CDS

#CDS PositionBLAST HitE-ValueSequence
12788299..2788313attL0.0Showinfo_outline
2complement(2801816..2802832)PHAGE_Salmon_Fels_2_NC_010463: integrase; NCTC9109_02919; phage(gi169936064)5.11e-129Showinfo_outline
3complement(2803019..2803210)Uncharacterised protein; NCTC9109_029200.0Showinfo_outline
4complement(2803226..2803795)PHAGE_Salmon_Fels_2_NC_010463: P2 CI-like protein; NCTC9109_02921; phage(gi169936063)9.26e-44Showinfo_outline
52803921..2804142PHAGE_Haemop_HP2_NC_003315: orf2(S)cox; NCTC9109_02922; phage(gi17981819)1.21e-06Showinfo_outline
62804175..2804684PHAGE_Salmon_Fels_2_NC_010463: bacteriophage regulatory protein CII; NCTC9109_02923; phage(gi169936061)6.52e-112Showinfo_outline
72804692..2804892PHAGE_Salmon_Fels_2_NC_010463: hypothetical protein; NCTC9109_02924; phage(gi169936060)7.37e-17Showinfo_outline
82804856..2805197PHAGE_Salmon_Fels_2_NC_010463: hypothetical protein; NCTC9109_02925; phage(gi169936058)9.33e-67Showinfo_outline
92805265..2805498PHAGE_Salmon_Fels_2_NC_010463: hypothetical protein; NCTC9109_02926; phage(gi169936057)5.58e-36Showinfo_outline
102805498..2805725PHAGE_Salmon_Fels_2_NC_010463: DksA-like zinc finger domain containing protein; NCTC9109_02927; phage(gi169936056)6.71e-44Showinfo_outline
112805722..2806579PHAGE_Salmon_Fels_2_NC_010463: DNA adenine methylase-like protein; NCTC9109_02928; phage(gi169936055)6.83e-149Showinfo_outline
122806576..2808990PHAGE_Salmon_Fels_2_NC_010463: P2 gpA-like protein; NCTC9109_02929; phage(gi169936054)0.0Showinfo_outline
132809143..2809331PHAGE_Salmon_Fels_2_NC_010463: hypothetical protein; NCTC9109_02930; phage(gi169936053)5.80e-38Showinfo_outline
142809342..2809575PHAGE_Salmon_Fels_2_NC_010463: TumB protein; NCTC9109_02931; phage(gi169936052)8.28e-50Showinfo_outline
152809689..2810366PHAGE_Salmon_Fels_2_NC_010463: hypothetical protein; NCTC9109_02932; phage(gi169936051)1.52e-161Showinfo_outline
162810692..2813028Uncharacterized protein conserved in bacteria; NCTC9109_029330.0Showinfo_outline
17complement(2813078..2814109)PHAGE_Salmon_Fels_2_NC_010463: portal vertex protein; NCTC9109_02934; phage(gi169936049)0.0Showinfo_outline
18complement(2814106..2814813)PHAGE_Entero_186_NC_001317: W protein; NCTC9109_02935; phage(gi9634057)2.52e-29Showinfo_outline
19complement(2814813..2816579)PHAGE_Salmon_Fels_2_NC_010463: terminase ATPase subunit; NCTC9109_02936; phage(gi169936048)0.0Showinfo_outline
202816722..2817555PHAGE_Salmon_Fels_2_NC_010463: capsid-scaffolding protein; NCTC9109_02937; phage(gi169936047)1.29e-174Showinfo_outline
212817572..2818630PHAGE_Salmon_Fels_2_NC_010463: capsid protein; NCTC9109_02938; phage(gi169936046)0.0Showinfo_outline
222818634..2819284PHAGE_Salmon_Fels_2_NC_010463: terminase endonuclease subunit; NCTC9109_02939; phage(gi169936045)6.70e-126Showinfo_outline
232819380..2819844PHAGE_Salmon_Fels_2_NC_010463: P2 gpL-like protein; NCTC9109_02940; phage(gi169936044)4.38e-102Showinfo_outline
242819844..2820047PHAGE_Salmon_Fels_2_NC_010463: P2 gpX-like tail protein; NCTC9109_02941; phage(gi169936043)8.30e-41Showinfo_outline
252820051..2820266PHAGE_Salmon_Fels_2_NC_010463: lysis protein; NCTC9109_02942; phage(gi169936042)1.13e-37Showinfo_outline
262820247..2820759PHAGE_Salmon_Fels_2_NC_010463: endolysin; NCTC9109_02943; phage(gi169936041)2.37e-103Showinfo_outline
272820761..2821138membrane protein; NCTC9109_029440.0Showinfo_outline
282821135..2821563PHAGE_Salmon_Fels_2_NC_010463: P2 LysB-like protein; NCTC9109_02945; phage(gi169936038)4.36e-62Showinfo_outline
292821659..2822090PHAGE_Salmon_Fels_2_NC_010463: P2 gpR-like tail completion protein; NCTC9109_02946; phage(gi169936036)1.51e-93Showinfo_outline
302822083..2822529PHAGE_Salmon_Fels_2_NC_010463: P2 gpS-like tail completion protein; NCTC9109_02947; phage(gi169936035)2.15e-93Showinfo_outline
312822598..2823176PHAGE_Salmon_Fels_2_NC_010463: P2 gpV-like protein; NCTC9109_02948; phage(gi169936034)3.27e-119Showinfo_outline
322823173..2823532PHAGE_Salmon_Fels_2_NC_010463: baseplate wedge subunit; NCTC9109_02949; phage(gi169936033)6.80e-67Showinfo_outline
332823519..2824427PHAGE_Salmon_Fels_2_NC_010463: baseplate assembly protein; NCTC9109_02950; phage(gi169936032)0.0Showinfo_outline
342824420..2825025PHAGE_Salmon_Fels_2_NC_010463: P2 gpI-like baseplate assembly protein; NCTC9109_02951; phage(gi169936031)3.28e-139Showinfo_outline
352825022..2826422PHAGE_Salmon_Fels_2_NC_010463: P2 gpH-like protein; NCTC9109_02952; phage(gi169936030)2.09e-144Showinfo_outline
362826449..2826889PHAGE_Escher_pro483_NC_028943: tail fiber assembly protein; NCTC9109_02953; phage(gi971758532)1.96e-67Showinfo_outline
37complement(2826861..2827463)PHAGE_Escher_pro483_NC_028943: putative tail fiber assembly protein; NCTC9109_02954; phage(gi971758533)2.63e-125Showinfo_outline
38complement(2827463..2828008)PHAGE_Escher_pro483_NC_028943: tail fiber protein; NCTC9109_02955; phage(gi971758534)1.09e-58Showinfo_outline
392828039..2828605PHAGE_Salmon_Fels_2_NC_010463: DNA-invertase; e14; phage prophage; NCTC9109_02956(gi169936026)5.59e-115Showinfo_outline
402828748..2829920PHAGE_Salmon_Fels_2_NC_010463: major tail sheath protein; NCTC9109_02957; phage(gi169936025)0.0Showinfo_outline
412829930..2830445PHAGE_Salmon_Fels_2_NC_010463: major tail tube protein; NCTC9109_02958; phage(gi169936024)8.79e-117Showinfo_outline
422830500..2830802PHAGE_Salmon_Fels_2_NC_010463: P2 gpE-like tail protein; NCTC9109_02959; phage(gi169936023)1.74e-58Showinfo_outline
432830926..2834006PHAGE_Salmon_Fels_2_NC_010463: P2 gpT-like tail protein; NCTC9109_02960; phage(gi169936021)0.0Showinfo_outline
442831645..2831659attR0.0Showinfo_outline
452834003..2834488PHAGE_Salmon_Fels_2_NC_010463: P2 gpU-like tail protein; NCTC9109_02961; phage(gi169936020)1.34e-98Showinfo_outline
462834485..2835585PHAGE_Salmon_Fels_2_NC_010463: tail protein; NCTC9109_02962; phage(gi169936019)0.0Showinfo_outline
472835718..2835936PHAGE_Salmon_Fels_2_NC_010463: P2 gpOgr-like protein (acttivation of late gene expression); NCTC9109_02963; phage(gi169936018)1.22e-27Showinfo_outline

Region 8, total 12 CDS

#CDS PositionBLAST HitE-ValueSequence
1complement(3496722..3497918)PHAGE_Vibrio_CTX_NC_015209: RstA; NCTC9109_03587; phage(gi332672300)9.29e-55Showinfo_outline
23498253..3498465Uncharacterised protein; NCTC9109_035880.0Showinfo_outline
33498768..3498941Uncharacterised protein; NCTC9109_035890.0Showinfo_outline
4complement(3499917..3500714)PROPHAGE_Escher_CFT073: transposase/IS protein; NCTC9109_03590; phage(gi26248359)2.01e-70Showinfo_outline
5complement(3500714..3501886)PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; NCTC9109_03591; phage(gi557307612)0.0Showinfo_outline
6complement(3501968..3503041)PHAGE_Entero_I2_2_NC_001332: phage assembly protein; NCTC9109_03592; phage(gi9625382)5.59e-06Showinfo_outline
7complement(3503051..3504307)PHAGE_Entero_I2_2_NC_001332: assembly protein; NCTC9109_03593; phage(gi9625390)1.00e-20Showinfo_outline
8complement(3504315..3504674)Uncharacterised protein; NCTC9109_035940.0Showinfo_outline
9complement(3504677..3505951)PHAGE_Entero_If1_NC_001954: attachment protein; NCTC9109_03595; phage(gi9630752)3.62e-05Showinfo_outline
10complement(3506007..3506282)Uncharacterised protein; NCTC9109_035960.0Showinfo_outline
11complement(3506576..3506911)Uncharacterised protein; NCTC9109_035970.0Showinfo_outline
12complement(3506921..3508117)PHAGE_Vibrio_CTX_NC_015209: RstA; NCTC9109_03598; phage(gi332672300)9.29e-55Showinfo_outline

Region 9, total 72 CDS

#CDS PositionBLAST HitE-ValueSequence
13553606..3554352PHAGE_Prochl_P_TIM68_NC_028955: hypothetical protein; NCTC9109_03644; phage(gi971760361)8.52e-10Showinfo_outline
23554441..3555127GntR family transcriptional regulator; NCTC9109_036450.0Showinfo_outline
33555305..3555508PHAGE_Salmon_SSU5_NC_018843: putative selenium-binding protein YdfZ; NCTC9109_03646; phage(gi410491512)4.86e-18Showinfo_outline
4complement(3555544..3557004)putative sugar dehydrogenase; NCTC9109_036470.0Showinfo_outline
53557025..3557036attL0.0Showinfo_outline
6complement(3557092..3558375)PHAGE_Burkho_phi1026b_NC_005284: gp59; NCTC9109_03648; phage(gi38707949)7.81e-28Showinfo_outline
73559161..3559394PHAGE_Salmon_118970_sal3_NC_031940: replication and recombination DNA helicase; NCTC9109_03649; phage(gi100033)1.44e-44Showinfo_outline
83559711..3560301PHAGE_Entero_Mu_NC_000929: Gin; NCTC9109_03650; phage(gi9633542)2.37e-29Showinfo_outline
9complement(3560974..3564048)PROPHAGE_Escher_MG1655: Qin prophage; predicted side tail fibre assembly protein; NCTC9109_03652; phage(gi16129506)0.0Showinfo_outline
10complement(3564113..3564712)PHAGE_Entero_YYZ_2008_NC_011356: putative outer membrane protein Lom precursor; NCTC9109_03653; phage(gi209427792)2.02e-138Showinfo_outline
11complement(3564782..3565378)PHAGE_Entero_cdtI_NC_009514: putative tail tip assembly protein; NCTC9109_03654; phage(gi148609400)5.95e-121Showinfo_outline
12complement(3565323..3567833)PHAGE_Entero_DE3_NC_042057: recombination endonuclease subunit; NCTC9109_03655; phage(gi100054)0.0Showinfo_outline
13complement(3567811..3568197)PHAGE_Entero_DE3_NC_042057: recombination endonuclease subunit; NCTC9109_03656; phage(gi100054)6.95e-49Showinfo_outline
14complement(3568258..3568929)PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9109_03657; phage(gi100053)1.49e-158Showinfo_outline
15complement(3568963..3569571)PHAGE_Entero_mEp460_NC_019716: tail fiber component; NCTC9109_03658; phage(gi428782332)3.48e-143Showinfo_outline
16complement(3569577..3570275)PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9109_03659; phage(gi100051)1.31e-172Showinfo_outline
17complement(3570309..3570605)PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9109_03660; phage(gi100050)1.95e-56Showinfo_outline
18complement(3570602..3571276)PHAGE_Entero_DE3_NC_042057: RNA polymerase sigma factor; NCTC9109_03661; phage(gi100049)3.89e-156Showinfo_outline
19complement(3571299..3571595)PHAGE_Entero_DE3_NC_042057: RNA polymerase sigma factor; NCTC9109_03662; phage(gi100049)7.74e-45Showinfo_outline
20complement(3571783..3572379)PHAGE_Entero_DE3_NC_042057: RNA polymerase sigma factor; NCTC9109_03663; phage(gi100049)1.17e-130Showinfo_outline
21complement(3572385..3572771)PHAGE_Entero_DE3_NC_042057: RNA polymerase sigma factor; NCTC9109_03664; phage(gi100049)1.05e-78Showinfo_outline
22complement(3572963..3573097)PHAGE_Entero_DE3_NC_042057: RNA polymerase sigma factor; NCTC9109_03665; phage(gi100049)7.50e-20Showinfo_outline
23complement(3573082..3573372)PHAGE_Entero_DE3_NC_042057: rnaseH; NCTC9109_03666; phage(gi100048)2.24e-55Showinfo_outline
24complement(3573506..3573928)PHAGE_Entero_DE3_NC_042057: dsDNA binding protein; NCTC9109_03667; phage(gi100047)2.34e-101Showinfo_outline
25complement(3573944..3574684)PHAGE_Entero_DE3_NC_042057: late promoter transcription; NCTC9109_03668; phage(gi100046)2.01e-176Showinfo_outline
26complement(3574692..3574847)PHAGE_Entero_DE3_NC_042057: loader of DNA helicase; NCTC9109_03669; phage(gi100045)6.03e-29Showinfo_outline
27complement(3574914..3575087)PHAGE_Entero_DE3_NC_042057: loader of DNA helicase; NCTC9109_03670; phage(gi100045)4.92e-34Showinfo_outline
28complement(3575084..3575662)PHAGE_Entero_DE3_NC_042057: ssDNA binding protein; NCTC9109_03671; phage(gi100044)6.31e-132Showinfo_outline
29complement(3575674..3576027)PHAGE_Entero_DE3_NC_042057: RNA polymerase binding protein; NCTC9109_03672; phage(gi100043)2.93e-78Showinfo_outline
30complement(3576039..3576437)PHAGE_Entero_DE3_NC_042057: sliding clamp DNA polymerase; NCTC9109_03673; phage(gi100042)2.96e-88Showinfo_outline
31complement(3576479..3577504)PHAGE_Entero_DE3_NC_042057: clamp-loader subunit; NCTC9109_03674; phage(gi100041)0.0Showinfo_outline
32complement(3577560..3577898)PHAGE_Entero_DE3_NC_042057: clamp-loader subunit; NCTC9109_03675; phage(gi100040)1.21e-72Showinfo_outline
33complement(3577902..3579221)PHAGE_Entero_DE3_NC_042057: RegA; NCTC9109_03676; phage(gi100039)0.0Showinfo_outline
34complement(3579202..3580803)PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9109_03677; phage(gi100038)0.0Showinfo_outline
35complement(3580800..3581006)PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9109_03678; phage(gi100037)4.55e-43Showinfo_outline
36complement(3581003..3582928)PHAGE_Entero_DE3_NC_042057: DNA polymerase; NCTC9109_03679; phage(gi100036)0.0Showinfo_outline
37complement(3582903..3583448)PHAGE_Entero_DE3_NC_042057: RecA-like recombination protein; NCTC9109_03680; phage(gi100035)3.70e-130Showinfo_outline
383583792..3583947arginyl-tRNA synthetase; NCTC9109_036810.0Showinfo_outline
393584115..3584408PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9109_03682; phage(gi100032)6.85e-54Showinfo_outline
40complement(3584440..3584901)PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9109_03683; phage(gi100031)3.98e-107Showinfo_outline
41complement(3584898..3585395)PHAGE_Entero_SfI_NC_027339: lysozyme; NCTC9109_03684; phage(gi849250312)1.02e-116Showinfo_outline
42complement(3585395..3585610)PHAGE_Entero_VT2phi_272_NC_028656: holin; NCTC9109_03685; phage(gi966197762)5.28e-37Showinfo_outline
433586199..3587296outer membrane porin; DLP12 prophage; NCTC9109_036860.0Showinfo_outline
44complement(3587486..3587869)PHAGE_Shigel_Stx_NC_029120: antitermination protein Q; NCTC9109_03687; phage(gi985761278)3.75e-71Showinfo_outline
45complement(3587955..3588092)PHAGE_Entero_mEp237_NC_019704: hypothetical protein; small; phage protein; NCTC9109_03688(gi435439319)2.16e-12Showinfo_outline
46complement(3588092..3588454)PHAGE_Entero_mEp237_NC_019704: Holliday junction resolvase RusA; NCTC9109_03689; phage(gi435439318)5.15e-79Showinfo_outline
47complement(3588451..3588741)PHAGE_Salmon_118970_sal4_NC_030919: replication and recombination DNA helicase; NCTC9109_03690; phage(gi100033)5.74e-41Showinfo_outline
48complement(3588734..3588904)PHAGE_Escher_HK639_NC_016158: NinE; NCTC9109_03691; phage(gi356870663)4.85e-20Showinfo_outline
49complement(3589063..3589860)PROPHAGE_Escher_CFT073: transposase/IS protein; NCTC9109_03692; phage(gi26248359)2.01e-70Showinfo_outline
50complement(3589860..3591032)PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; NCTC9109_03693; phage(gi557307612)0.0Showinfo_outline
51complement(3591119..3591493)PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; DNA; phage base-flipping protein; NCTC9109_03694(gi401817579)6.29e-63Showinfo_outline
52complement(3591708..3592505)DNA-binding transcriptional regulator; DLP12 prophage; NCTC9109_036950.0Showinfo_outline
53complement(3592515..3593066)kinase inhibitor; NCTC9109_036960.0Showinfo_outline
54complement(3593531..3595057)PHAGE_Burkho_Bcep176_NC_007497: gp53; DLP12; phage prophage; NCTC9109_03697(gi77864678)7.63e-36Showinfo_outline
55complement(3595312..3595644)PHAGE_Acinet_Acj61_NC_014661: putative quaternary ammonium compound-resistance protein qacE; NCTC9109_03698; phage(gi311992758)6.74e-10Showinfo_outline
56complement(3595712..3596014)PHAGE_Escher_PA28_NC_041935: replication and recombination DNA helicase; NCTC9109_03699; phage(gi100033)4.33e-60Showinfo_outline
57complement(3596011..3596712)PHAGE_Entero_DE3_NC_042057: DNA primase subunit; NCTC9109_03700; phage(gi100025)8.88e-168Showinfo_outline
58complement(3596709..3597713)PHAGE_Escher_PA28_NC_041935: hypothetical protein; NCTC9109_03701; phage(gi100031)1.20e-141Showinfo_outline
59complement(3597725..3597985)PHAGE_Entero_mEp237_NC_019704: CII protein; NCTC9109_03702; phage(gi435439306)5.57e-36Showinfo_outline
60complement(3598088..3598264)PHAGE_Entero_phi80_NC_021190: CII decision making protein; NCTC9109_03703; phage(gi824479625)5.93e-21Showinfo_outline
61complement(3598334..3598564)PHAGE_Escher_PA28_NC_041935: hypothetical protein; NCTC9109_03704; phage(gi100029)1.16e-24Showinfo_outline
623598603..3599358PHAGE_Salmon_BTP1_NC_042346: RegA; NCTC9109_03705; phage(gi100039)3.95e-122Showinfo_outline
633599954..3600160PHAGE_Entero_HK225_NC_019717: Kil protein; NCTC9109_03706; phage(gi428782413)8.22e-37Showinfo_outline
643600236..3600532PHAGE_Escher_PA28_NC_041935: DNA helicase; NCTC9109_03707; phage(gi100021)2.30e-66Showinfo_outline
653600538..3601323PHAGE_Entero_933W_NC_000924: Bet protein; NCTC9109_03708; phage(gi9632480)0.0Showinfo_outline
663601320..3602000PHAGE_Entero_YYZ_2008_NC_011356: putative exonuclease; NCTC9109_03709; phage(gi209427739)5.84e-169Showinfo_outline
673601997..3602158PHAGE_Entero_VT2_Sakai_NC_000902: hypothetical protein; NCTC9109_03710; phage(gi9633408)5.29e-30Showinfo_outline
683602151..3602708PHAGE_Erwini_phiEt88_NC_015295: DNA N-6-adenine-methyltransferase; NCTC9109_03711; phage(gi327198618)6.33e-78Showinfo_outline
693602785..3603000PHAGE_Escher_PA28_NC_041935: hypothetical protein; NCTC9109_03712; phage(gi100017)1.65e-47Showinfo_outline
703603365..3603643PHAGE_Entero_SfI_NC_027339: hypothetical protein; NCTC9109_03713; phage(gi849250253)1.41e-62Showinfo_outline
713603842..3605005PHAGE_Shigel_Stx_NC_029120: integrase; NCTC9109_03714; phage(gi985761248)0.0Showinfo_outline
723605903..3605914attR0.0Showinfo_outline

Region 10, total 67 CDS

#CDS PositionBLAST HitE-ValueSequence
14210238..4210250attL0.0Showinfo_outline
24214573..4215352PHAGE_Mycoba_Phantastic_NC_024148: esterase/lipase; NCTC9109_04287; phage(gi640885329)9.09e-07Showinfo_outline
3complement(4215766..4216929)Uncharacterised protein; NCTC9109_042880.0Showinfo_outline
4complement(4216960..4218069)PHAGE_Entero_phiP27_NC_003356: putative tail fiber protein; NCTC9109_04289; phage(gi18249920)1.47e-77Showinfo_outline
5complement(4218094..4219182)PROPHAGE_Xylell_Temecula1: phage-related tail protein; NCTC9109_04290; phage(gi28198980)2.55e-29Showinfo_outline
6complement(4219173..4219391)PHAGE_Ralsto_RSA1_NC_009382: phage tail X; NCTC9109_04291; phage(gi145708085)2.50e-15Showinfo_outline
7complement(4219366..4219854)PHAGE_Vibrio_vB_VpaM_MAR_NC_019722: putative tail protein; NCTC9109_04292; phage(gi428782751)1.91e-19Showinfo_outline
8complement(4219857..4221509)Uncharacterised protein; NCTC9109_042930.0Showinfo_outline
9complement(4221490..4221627)Uncharacterised protein; NCTC9109_042940.0Showinfo_outline
10complement(4221627..4221929)putative phage-like protein; NCTC9109_042950.0Showinfo_outline
11complement(4221990..4222508)PHAGE_Pseudo_PPpW_3_NC_023006: putative tail tube protein; NCTC9109_04296; phage(gi564292500)2.55e-17Showinfo_outline
12complement(4222505..4223245)PHAGE_Escher_vB_EcoM_ECO1230_10_NC_027995: putative phage tail protein; NCTC9109_04297; phage(gi937533292)6.94e-60Showinfo_outline
13complement(4223307..4223642)PHAGE_Vibrio_VHML_NC_004456: major tail sheath protein; NCTC9109_04298; phage(gi27311206)8.47e-11Showinfo_outline
14complement(4223648..4223980)PHAGE_Pseudo_PPpW_3_NC_023006: putative tail sheath protein; NCTC9109_04299; phage(gi564292499)2.90e-06Showinfo_outline
15complement(4224034..4224576)PHAGE_Entero_phiP27_NC_003356: putative tail fiber assembly protein; NCTC9109_04300; phage(gi18249919)3.17e-95Showinfo_outline
16complement(4224579..4225613)PHAGE_Entero_phiP27_NC_003356: putative tail fiber protein; NCTC9109_04301; phage(gi18249918)5.99e-137Showinfo_outline
17complement(4225610..4225837)Uncharacterised protein; NCTC9109_043020.0Showinfo_outline
18complement(4225834..4226424)PHAGE_Escher_vB_EcoM_ep3_NC_025430: tail protein; NCTC9109_04303; phage(gi712913209)8.31e-29Showinfo_outline
19complement(4226417..4227331)PHAGE_Escher_vB_EcoM_ECO1230_10_NC_027995: putative phage tail protein; NCTC9109_04304; phage(gi937533298)1.85e-79Showinfo_outline
20complement(4227306..4227662)PHAGE_Pseudo_PPpW_3_NC_023006: putative baseplate assembly protein with lysozyme; NCTC9109_04305; phage(gi564292493)1.80e-26Showinfo_outline
21complement(4227697..4228320)PHAGE_Erwini_ENT90_NC_019932: baseplate assembly protein; NCTC9109_04306; phage(gi431810950)7.05e-16Showinfo_outline
22complement(4228304..4228855)Uncharacterised protein; NCTC9109_043070.0Showinfo_outline
23complement(4228867..4229589)PHAGE_Pseudo_PPpW_3_NC_023006: putative minor tail protein Z; NCTC9109_04308; phage(gi564292490)1.13e-05Showinfo_outline
24complement(4229570..4229971)PHAGE_Entero_mEp237_NC_019704: head-tail connector Fii; NCTC9109_04309; phage(gi435439274)2.27e-12Showinfo_outline
25complement(4229974..4230339)PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage accessory DNA packaging protein; Lambda FI homolog; NCTC9109_04310; phage(gi169257229)4.99e-08Showinfo_outline
26complement(4230390..4231418)PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage major capsid protein; Lambda gpE homolog; NCTC9109_04311; phage(gi169257230)0.0Showinfo_outline
27complement(4231487..4231822)PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head decoration protein; Lambda gpD homolog; NCTC9109_04312; phage(gi169257231)1.01e-54Showinfo_outline
28complement(4231861..4233477)PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage prohead protease; Lambda gpC homolog; NCTC9109_04313; phage(gi169257232)0.0Showinfo_outline
29complement(4233467..4235038)PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage portal protein; Lambda gpB homolog; NCTC9109_04314; phage(gi169257233)0.0Showinfo_outline
30complement(4235035..4235244)PHAGE_Entero_HK225_NC_019717: head-tail connector gpW; NCTC9109_04315; phage(gi428782379)1.77e-17Showinfo_outline
31complement(4235248..4237164)PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; large terminase subunit; Lambda gpA homolog; NCTC9109_04316; phage(gi169257235)0.0Showinfo_outline
32complement(4237136..4237642)PHAGE_Entero_N15_NC_001901: gp1; NCTC9109_04317; phage(gi9630465)2.43e-48Showinfo_outline
334238045..4238251Uncharacterised protein; NCTC9109_043180.0Showinfo_outline
34complement(4238300..4238593)PHAGE_Entero_phiP27_NC_003356: hypothetical protein; NCTC9109_04319; phage(gi18249897)2.29e-59Showinfo_outline
35complement(4238768..4238923)Uncharacterised protein; NCTC9109_043200.0Showinfo_outline
36complement(4239035..4239232)putative bacteriophage protein; NCTC9109_043210.0Showinfo_outline
37complement(4239312..4239593)Uncharacterised protein; NCTC9109_043220.0Showinfo_outline
38complement(4239664..4240041)PHAGE_Entero_phiP27_NC_003356: putative endolysin; NCTC9109_04323; phage(gi18249894)5.69e-79Showinfo_outline
39complement(4240131..4240502)Heat-labile enterotoxin IIB, B chain precursor; NCTC9109_043240.0Showinfo_outline
40complement(4240515..4241276)PHAGE_Vibrio_CTX_NC_015209: CtxA; NCTC9109_04325; phage(gi332672306)1.34e-88Showinfo_outline
41complement(4241708..4242097)PHAGE_Entero_phiP27_NC_003356: putative holin; NCTC9109_04326; phage(gi18249892)3.99e-71Showinfo_outline
42complement(4242832..4242906)tRNA0.0Showinfo_outline
43complement(4242910..4242985)tRNA0.0Showinfo_outline
44complement(4242988..4243064)tRNA0.0Showinfo_outline
45complement(4243066..4243141)tRNA0.0Showinfo_outline
46complement(4243505..4243873)PHAGE_Entero_cdtI_NC_009514: antitermination protein Q; NCTC9109_04331; phage(gi148609434)1.63e-78Showinfo_outline
47complement(4243891..4244052)PHAGE_Entero_SfV_NC_003444: hypothetical protein; NCTC9109_04332; phage(gi19549032)3.32e-32Showinfo_outline
48complement(4244177..4244974)PROPHAGE_Escher_CFT073: transposase/IS protein; NCTC9109_04333; phage(gi26248359)2.01e-70Showinfo_outline
49complement(4244974..4246146)PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; NCTC9109_04334; phage(gi557307612)0.0Showinfo_outline
50complement(4246220..4247014)PHAGE_Entero_SfV_NC_003444: hypothetical protein; NCTC9109_04335; phage(gi19549032)6.36e-167Showinfo_outline
51complement(4247022..4247831)PHAGE_Entero_SfV_NC_003444: hypothetical protein; NCTC9109_04336; phage(gi19549031)4.88e-169Showinfo_outline
52complement(4247851..4248240)PHAGE_Entero_SfV_NC_003444: crossover junction endodeoxyribonuclease; NCTC9109_04337; phage(gi19549030)2.86e-90Showinfo_outline
53complement(4248237..4248563)PHAGE_Entero_SfV_NC_003444: hypothetical protein; NCTC9109_04338; phage(gi19549029)1.94e-70Showinfo_outline
54complement(4248563..4249051)PHAGE_Entero_SfV_NC_003444: hypothetical protein; NCTC9109_04339; phage(gi19549027)4.05e-108Showinfo_outline
55complement(4249054..4249872)PHAGE_Entero_SfV_NC_003444: replication protein; NCTC9109_04340; phage(gi19549026)0.0Showinfo_outline
56complement(4249869..4250093)PHAGE_Entero_SfV_NC_003444: hypothetical protein; NCTC9109_04341; phage(gi19549025)7.40e-35Showinfo_outline
57complement(4251235..4251786)PHAGE_Entero_SfV_NC_003444: hypothetical protein; NCTC9109_04344; phage(gi19549023)1.18e-133Showinfo_outline
58complement(4251830..4252030)PHAGE_Entero_SfV_NC_003444: repressor; NCTC9109_04345; phage(gi19549022)5.24e-42Showinfo_outline
594252121..4252795PHAGE_Entero_SfV_NC_003444: repressor; NCTC9109_04346; phage(gi19549021)1.83e-167Showinfo_outline
60complement(4252991..4253200)Uncharacterised protein; NCTC9109_043470.0Showinfo_outline
614254065..4254427PHAGE_Entero_SfV_NC_003444: hypothetical protein; NCTC9109_04348; phage(gi19549019)1.84e-82Showinfo_outline
624254493..4255317PHAGE_Entero_SfV_NC_003444: hypothetical protein; NCTC9109_04349; phage(gi19549018)0.0Showinfo_outline
634255445..4255981PHAGE_Entero_SfV_NC_003444: hypothetical protein; NCTC9109_04350; phage(gi19549017)8.55e-127Showinfo_outline
644255978..4256142Uncharacterised protein; NCTC9109_043510.0Showinfo_outline
654256470..4257507Uncharacterised protein; NCTC9109_043520.0Showinfo_outline
664257343..4257355attR0.0Showinfo_outline
67complement(4257602..4258825)PHAGE_Entero_cdtI_NC_009514: Phage integrase; NCTC9109_04353; phage(gi148609414)0.0Showinfo_outline

Region 11, total 19 CDS

#CDS PositionBLAST HitE-ValueSequence
1complement(4355268..4356533)PROPHAGE_Shigel_301: putative P4-type integrase; NCTC9109_04444; phage(gi24114228)0.0Showinfo_outline
24356725..4356738attL0.0Showinfo_outline
3complement(4356737..4357033)PHAGE_Entero_P4_NC_001609: hypothetical protein; NCTC9109_04445; phage(gi19263411)1.40e-67Showinfo_outline
4complement(4357278..4359611)PHAGE_Entero_P4_NC_001609: DNA primase; NCTC9109_04446; phage(gi9627512)0.0Showinfo_outline
5complement(4359626..4359946)PHAGE_Entero_P4_NC_001609: hypothetical protein; NCTC9109_04447; phage(gi9627513)1.19e-71Showinfo_outline
6complement(4360082..4360537)PHAGE_Entero_P4_NC_001609: hypothetical protein; NCTC9109_04448; phage(gi9627514)2.67e-107Showinfo_outline
7complement(4360530..4360817)PHAGE_Entero_P4_NC_001609: helper derepression protein; NCTC9109_04449; phage(gi9627515)1.22e-63Showinfo_outline
8complement(4361406..4361672)PHAGE_Entero_P4_NC_001609: transcriptional regulator; NCTC9109_04452; phage(gi9627517)1.12e-59Showinfo_outline
94362225..4362533PHAGE_Entero_P4_NC_001609: head size determination protein sid; NCTC9109_04453; phage(gi9627518)1.13e-61Showinfo_outline
104362615..4363787PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; NCTC9109_04454; phage(gi557307612)0.0Showinfo_outline
114363787..4364584PROPHAGE_Escher_CFT073: transposase/IS protein; NCTC9109_04455; phage(gi26248359)2.01e-70Showinfo_outline
124364632..4365093PHAGE_Entero_P4_NC_001609: head size determination protein sid; NCTC9109_04456; phage(gi9627518)2.45e-104Showinfo_outline
134365090..4365590PHAGE_Entero_P4_NC_001609: transactivation protein; NCTC9109_04457; phage(gi9627519)4.97e-117Showinfo_outline
144365664..4366236PHAGE_Entero_P4_NC_001609: amber mutation-suppressing protein; NCTC9109_04458; phage(gi9627520)3.19e-136Showinfo_outline
154366562..4367806PHAGE_Halovi_HGTV_1_NC_021328: AdoMet-MTase; NCTC9109_04459; phage(gi509140530)1.64e-35Showinfo_outline
16complement(4367844..4368662)Uncharacterised protein; NCTC9109_044600.0Showinfo_outline
17complement(4368655..4368960)PHAGE_Lactob_phiAQ113_NC_019782: putative transcriptional regulator; NCTC9109_04461; phage(gi446730276)7.52e-07Showinfo_outline
18complement(4369128..4370402)PHAGE_Entero_P4_NC_001609: integrase; NCTC9109_04462; phage(gi9627511)0.0Showinfo_outline
194370573..4370586attR0.0Showinfo_outline

Region 12, total 22 CDS

#CDS PositionBLAST HitE-ValueSequence
1complement(4637411..4637752)PHAGE_Burkho_BcepMu_NC_005882: gp01; NCTC9109_04717; phage(gi48696911)1.17e-30Showinfo_outline
24638289..4638576PHAGE_Burkho_BcepMu_NC_005882: gp21; NCTC9109_04718; phage(gi48696931)1.05e-14Showinfo_outline
34638579..4639184PHAGE_Pseudo_B3_NC_006548: endolysin; NCTC9109_04719; phage(gi56692593)1.12e-69Showinfo_outline
44639197..4639511PHAGE_Burkho_BcepMu_NC_005882: gp25; NCTC9109_04720; phage(gi48696935)1.48e-28Showinfo_outline
54639658..4640113PHAGE_Burkho_BcepMu_NC_005882: gp37; NCTC9109_04721; phage(gi48696947)5.84e-15Showinfo_outline
64640110..4640307PHAGE_Burkho_BcepMu_NC_005882: gp38; NCTC9109_04722; phage(gi48696948)2.53e-11Showinfo_outline
74640297..4641721PHAGE_Burkho_BcepMu_NC_005882: major tail sheath protein; NCTC9109_04723; phage(gi48696949)0.0Showinfo_outline
84641721..4642245PHAGE_Burkho_BcepMu_NC_005882: gp40; NCTC9109_04724; phage(gi48696950)2.10e-90Showinfo_outline
94642296..4642613PHAGE_Burkho_BcepMu_NC_005882: gp41; NCTC9109_04725; phage(gi48696951)4.08e-11Showinfo_outline
104642803..4644506PHAGE_Burkho_BcepMu_NC_005882: gp44; NCTC9109_04726; phage(gi48696954)5.40e-28Showinfo_outline
114644606..4645178PHAGE_Burkho_BcepMu_NC_005882: gp44; NCTC9109_04727; phage(gi48696954)1.20e-17Showinfo_outline
124645178..4646131PHAGE_Burkho_BcepMu_NC_005882: gp45; NCTC9109_04728; phage(gi48696955)2.26e-49Showinfo_outline
134646131..4646340PHAGE_Burkho_BcepMu_NC_005882: gp46; NCTC9109_04729; phage(gi48696956)4.16e-22Showinfo_outline
144646328..4647368PHAGE_Burkho_BcepMu_NC_005882: tail protein; NCTC9109_04730; phage(gi48696957)2.39e-96Showinfo_outline
154647378..4648079PHAGE_Burkho_BcepMu_NC_005882: gp48; NCTC9109_04731; phage(gi48696958)4.76e-38Showinfo_outline
164648178..4648537PHAGE_Burkho_BcepMu_NC_005882: gp49; NCTC9109_04732; phage(gi48696959)2.59e-43Showinfo_outline
174648528..4649643PHAGE_Burkho_BcepMu_NC_005882: gp50; NCTC9109_04733; phage(gi48696960)7.52e-129Showinfo_outline
184649636..4650352PHAGE_Burkho_BcepMu_NC_005882: gp51; NCTC9109_04734; phage(gi48696961)2.22e-28Showinfo_outline
194650355..4651935PHAGE_Salmon_SEN5_NC_028701: tail fiber protein; NCTC9109_04735; phage(gi966201574)9.50e-130Showinfo_outline
204651932..4652639PHAGE_Salmon_SEN5_NC_028701: tail fibers protein; NCTC9109_04736; phage(gi966201576)1.53e-30Showinfo_outline
214652636..4653091PHAGE_Haemop_SuMu_NC_019455: enoyl-CoA hydratase/carnithine racemase-like protein; NCTC9109_04737; phage(gi418489075)5.01e-32Showinfo_outline
22complement(4653105..4653896)PHAGE_Pseudo_SL2_NC_042081: hypothetical protein; NCTC9109_04738; phage(gi100092)8.27e-57Showinfo_outline
Click on a region to see details.
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)

Viewer Options
Length: 5016520 bps
Phages: 12
arrow_upwardarrow_upwardarrow_upward
Click on a region in the genome above to show details here.
Viewer Options
Click on a sequence to see details.
Viewer Options
Click on a sequence to see details.
Viewer Options
Click on a sequence to see details.
Viewer Options
Click on a sequence to see details.
Viewer Options
Click on a sequence to see details.
Viewer Options
Click on a sequence to see details.
Viewer Options
Click on a sequence to see details.
Viewer Options
Click on a sequence to see details.
Viewer Options
Click on a sequence to see details.
Viewer Options
Click on a sequence to see details.
Viewer Options
Click on a sequence to see details.
Viewer Options
Click on a sequence to see details.
Lysis
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Fiber Protein
Plate Protein
tRNA

Download data as .txt file: png_input file_download