Submission Results

Sequence Name: Not Available

GenBank Accession Number: UGEC01000002.1

GenInfo (GI) Number: 0000000000

Download Results: UGEC01000002.1.PHASTER.zip

gi|00000000|ref|UGEC01000002.1| Escherichia coli strain NCTC9097 genome assembly, contig: 5230290, gc%: 50.76%

Download summary as .txt file: summary.txt file_download

Total: 11 prophage regions have been identified, of which 9 regions are intact, 2 regions are incomplete, and 0 regions are questionable.

RegionRegion LengthCompletenessScore# Total ProteinsRegion PositionMost Common PhageGC %Details
161.3Kbintact150861690292-1751648 info_outlinePHAGE_Entero_BP_4795_NC_004813(45)51.40%Show info_outline
212.7Kbincomplete30171835554-1848297 info_outlinePHAGE_Entero_phi92_NC_023693(5)42.00%Show info_outline
375.7Kbintact150872329285-2405045 info_outlinePHAGE_Shigel_POCJ13_NC_025434(36)50.46%Show info_outline
416.1Kbincomplete40152407313-2423461 info_outlinePHAGE_Escher_RCS47_NC_042128(2)47.22%Show info_outline
531.9Kbintact150372422683-2454622 info_outlinePHAGE_Entero_mEp460_NC_019716(22)51.77%Show info_outline
669Kbintact150692768444-2837538 info_outlinePHAGE_Entero_BP_4795_NC_004813(25)49.54%Show info_outline
749.7Kbintact120642951364-3001155 info_outlinePHAGE_Entero_DE3_NC_042057(16)51.78%Show info_outline
841.3Kbintact150583081738-3123115 info_outlinePHAGE_Entero_Mu_NC_000929(36)53.61%Show info_outline
933.7Kbintact150203178575-3212274 info_outlinePHAGE_Stx2_c_1717_NC_011357(3)47.28%Show info_outline
1036.6Kbintact120303385274-3421934 info_outlinePHAGE_Stx2_c_1717_NC_011357(3)52.66%Show info_outline
1145.9Kbintact130614091732-4137653 info_outlinePHAGE_Edward_GF_2_NC_026611(20)48.89%Show info_outline
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Region: The number assigned to the region.
Region Length: The length of the sequence of that region (in bp).
Completeness: A prediction of whether the region contains a intact or incomplete prophage based on the above criteria.
Score: The score of the region based on the above criteria.
# Total Proteins: The number of ORFs present in the region.
Region Position: The start and end positions of the region on the bacterial chromosome.
Most Common Phage: The phage(s) with the highest number of proteins most similar to those in the region.
GC %: The percentage of GC nucleotides of the region.

Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:

  1. If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
Method 2:
  1. If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
Method 3:
  1. If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
  2. If the size of the region is greater than 30 Kb, the score will be increased by 10.
  3. If there are at least 40 proteins in the region, the score will be increased by 10.
  4. If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
Compared the total score of method 2 with the total score of method 3, the bigger one is chosen as the total score of the region.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.

gi|00000000|ref|UGEC01000002.1| Escherichia coli strain NCTC9097 genome assembly, contig: 5230290, gc%: 50.76%

Download details as .txt file: detail.txt file_download

Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File

Region 1, total 91 CDS

#CDS PositionBLAST HitE-ValueSequence
11690292..1691218PHAGE_Bacill_G_NC_023719: gp245; NCTC9097_01839; phage(gi593777701)3.29e-29Showinfo_outline
21691223..1691954ABC transporter permease; NCTC9097_018400.0Showinfo_outline
3complement(1691935..1692042)putative inner membrane protein; NCTC9097_018410.0Showinfo_outline
4complement(1692102..1692749)MerR family transcriptional regulator; NCTC9097_018420.0Showinfo_outline
51692766..1692786attL0.0Showinfo_outline
6complement(1692824..1694110)PHAGE_Entero_BP_4795_NC_004813: putative integrase; NCTC9097_01843; phage(gi157165986)0.0Showinfo_outline
7complement(1694144..1694398)PHAGE_Entero_BP_4795_NC_004813: putative excisionase; NCTC9097_01844; phage(gi157165987)8.49e-58Showinfo_outline
8complement(1694417..1694551)PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; NCTC9097_01845; phage(gi157165988)3.64e-24Showinfo_outline
9complement(1694555..1694797)PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; NCTC9097_01846; phage(gi157165989)4.70e-47Showinfo_outline
10complement(1694882..1695433)PHAGE_Shigel_Stx_NC_029120: EaA protein; NCTC9097_01847; phage(gi985761317)2.51e-79Showinfo_outline
11complement(1695436..1695627)PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; NCTC9097_01848; phage(gi157165991)1.31e-36Showinfo_outline
12complement(1695629..1696399)PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; NCTC9097_01849; phage(gi157165992)0.0Showinfo_outline
13complement(1696396..1696617)PHAGE_Entero_BP_4795_NC_004813: DksA-like zinc finger domain containing protein; NCTC9097_01850; phage(gi157165993)1.65e-46Showinfo_outline
14complement(1696716..1697201)PHAGE_Stx2_c_86_NC_008464: hypothetical protein; NCTC9097_01851; phage(gi116222041)6.26e-65Showinfo_outline
15complement(1697174..1697356)PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; NCTC9097_01852; phage(gi157165996)9.41e-38Showinfo_outline
16complement(1697353..1698033)PHAGE_Entero_BP_4795_NC_004813: putative exonuclease; NCTC9097_01853; phage(gi157165997)2.23e-167Showinfo_outline
17complement(1698030..1698815)PHAGE_Stx2_c_86_NC_008464: recombination protein Bet; NCTC9097_01854; phage(gi116222044)0.0Showinfo_outline
18complement(1698821..1699117)PHAGE_Entero_BP_4795_NC_004813: putative host-nuclease inhibitor protein Gam; NCTC9097_01855; phage(gi157165999)3.78e-66Showinfo_outline
19complement(1699192..1699335)PHAGE_Entero_BP_4795_NC_004813: putative Kil protein; NCTC9097_01856; phage(gi157166000)3.28e-27Showinfo_outline
20complement(1699541..1699909)PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9097_01858; phage(gi100017)1.27e-85Showinfo_outline
21complement(1700049..1700207)PHAGE_Entero_mEp213_NC_019720: hypothetical protein; NCTC9097_01859; phage(gi428782637)2.25e-30Showinfo_outline
22complement(1700207..1700503)PHAGE_Salmon_BTP1_NC_042346: membrane-associated initiation of head vertex; NCTC9097_01860; phage(gi100034)4.83e-15Showinfo_outline
23complement(1700550..1701020)PHAGE_Escher_PA28_NC_041935: DNA primase subunit; NCTC9097_01861; phage(gi100025)1.35e-114Showinfo_outline
24complement(1701079..1701462)PHAGE_Entero_933W_NC_000924: antitermination protein N; NCTC9097_01862; phage(gi9632486)5.02e-90Showinfo_outline
25complement(1701959..1702579)PHAGE_Entero_HK542_NC_019769: hypothetical protein; NCTC9097_01863; phage(gi428783380)1.04e-145Showinfo_outline
26complement(1702576..1703010)PHAGE_Entero_HK542_NC_019769: hypothetical protein; NCTC9097_01864; phage(gi428783381)1.33e-101Showinfo_outline
27complement(1703081..1703422)PHAGE_Stx2_c_86_NC_008464: hypothetical protein; NCTC9097_01865; phage(gi116222054)1.21e-80Showinfo_outline
28complement(1703483..1704190)PHAGE_Entero_BP_4795_NC_004813: putative repressor protein CI; NCTC9097_01866; phage(gi157166008)5.58e-105Showinfo_outline
291704269..1704496PHAGE_Entero_933W_NC_000924: regulatory protein Cro; NCTC9097_01867; phage(gi9632492)1.54e-48Showinfo_outline
301704635..1704931PHAGE_Entero_BP_4795_NC_004813: putative regulatory protein CII; NCTC9097_01868; phage(gi157166010)2.24e-66Showinfo_outline
311704964..1705902PHAGE_Entero_BP_4795_NC_004813: putative replication protein O; NCTC9097_01869; phage(gi157166011)0.0Showinfo_outline
321705899..1706600PHAGE_Entero_BP_4795_NC_004813: putative replication protein P; NCTC9097_01870; phage(gi157166012)6.09e-169Showinfo_outline
331706597..1706887PHAGE_Entero_BP_4795_NC_004813: putative Ren protein; NCTC9097_01871; phage(gi157166013)3.03e-64Showinfo_outline
341706973..1707188PHAGE_Escher_PA28_NC_041935: DNA polymerase; NCTC9097_01872; phage(gi100036)4.65e-44Showinfo_outline
351707199..1707435PHAGE_Entero_VT2_Sakai_NC_000902: hypothetical protein; NCTC9097_01873; phage(gi9633426)5.29e-51Showinfo_outline
361707392..1707838PHAGE_Stx2_c_1717_NC_011357: NinB protein; NCTC9097_01874; phage(gi209447158)9.02e-103Showinfo_outline
371707835..1708362PHAGE_Entero_Sf101_NC_027398: DNA methylase; NCTC9097_01875; phage(gi849122310)1.51e-128Showinfo_outline
381708819..1709490PHAGE_Shigel_Stx_NC_029120: antirepressor protein; NCTC9097_01878; phage(gi985761273)7.72e-133Showinfo_outline
391710498..1711220PHAGE_Entero_HK633_NC_019719: DNA-binding protein; NCTC9097_01880; phage(gi428782577)4.32e-156Showinfo_outline
401711220..1711510PHAGE_Entero_c_1_NC_019706: hypothetical protein; NCTC9097_01881; phage(gi428781793)1.84e-66Showinfo_outline
411711507..1711869PHAGE_Entero_mEp235_NC_019708: holliday junction resolvase RusA; NCTC9097_01882; phage(gi428781863)3.33e-80Showinfo_outline
421711866..1712549PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage antiterminator protein Q; NCTC9097_01883; phage(gi169257244)4.22e-95Showinfo_outline
431712764..1712967PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC9097_01884; phage(gi428782368)2.07e-44Showinfo_outline
441713118..1714167PHAGE_Entero_phiP27_NC_003356: putative DNA methylase; NCTC9097_01885; phage(gi18249888)0.0Showinfo_outline
451714217..1714292tRNA0.0Showinfo_outline
461714300..1714376tRNA0.0Showinfo_outline
471714391..1714467tRNA0.0Showinfo_outline
481714638..1715069PHAGE_Erwini_vB_EamM_ChrisDB_NC_031126: DNA topoisomerase medium subunit; NCTC9097_01889; phage(gi100004)2.26e-62Showinfo_outline
491715066..1715239PHAGE_Escher_Pollock_NC_027381: hypothetical protein; NCTC9097_01890; phage(gi849254797)3.80e-10Showinfo_outline
501715726..1717669PHAGE_Entero_BP_4795_NC_004813: hypothetical protein YjhS; NCTC9097_01892; phage(gi157166028)0.0Showinfo_outline
511717818..1718000PHAGE_Stx2_vB_EcoP_24B_NC_027984: hypothetical protein; NCTC9097_01893; phage(gi937456280)2.42e-33Showinfo_outline
521718038..1718307PHAGE_Escher_P13374_NC_018846: hypothetical protein; NCTC9097_01894; phage(gi410491644)6.00e-36Showinfo_outline
531718383..1718598PHAGE_Shigel_Ss_VASD_NC_028685: holin lysis protein S; NCTC9097_01895; phage(gi966200466)1.22e-45Showinfo_outline
541718603..1718947PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; NCTC9097_01896; phage(gi157166032)3.03e-75Showinfo_outline
551718998..1719531PHAGE_Entero_BP_4795_NC_004813: putative R protein; Qin; phage prophage; NCTC9097_01897(gi157166033)1.48e-125Showinfo_outline
561719724..1719870Uncharacterised protein; NCTC9097_018980.0Showinfo_outline
571719885..1720016PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; NCTC9097_01899; phage(gi157166035)3.62e-11Showinfo_outline
581720028..1720486PHAGE_Entero_BP_4795_NC_004813: putative endopeptidase Rz; NCTC9097_01900; phage(gi157166036)3.71e-94Showinfo_outline
591720510..1720734Uncharacterised protein; NCTC9097_019010.0Showinfo_outline
601721079..1721405putative tonB-like membrane protein from phage origin; NCTC9097_019020.0Showinfo_outline
61complement(1721537..1721737)PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; NCTC9097_01903; phage(gi157166037)8.66e-27Showinfo_outline
621721779..1722144PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; NCTC9097_01904; phage(gi157166038)2.05e-77Showinfo_outline
631722435..1722998PHAGE_Entero_BP_4795_NC_004813: putative small subunit terminase; NCTC9097_01905; phage(gi157166039)4.87e-116Showinfo_outline
641722995..1724656PHAGE_Entero_BP_4795_NC_004813: putative large subunit terminase; NCTC9097_01906; phage(gi157166040)0.0Showinfo_outline
651724720..1726657PHAGE_Entero_BP_4795_NC_004813: putative major head protein/prohead protease; NCTC9097_01907; phage(gi157166041)0.0Showinfo_outline
661726702..1726923PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; NCTC9097_01908; phage(gi157166042)2.85e-48Showinfo_outline
671726869..1728233PHAGE_Entero_BP_4795_NC_004813: putative portal protein; NCTC9097_01909; phage(gi157166043)0.0Showinfo_outline
681728230..1729453PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; NCTC9097_01910; phage(gi157166044)0.0Showinfo_outline
691729450..1729776PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; NCTC9097_01911; phage(gi157166045)2.47e-72Showinfo_outline
701729786..1730136PHAGE_Entero_BP_4795_NC_004813: putative head-tail adaptor; NCTC9097_01912; phage(gi157166046)2.66e-78Showinfo_outline
711730133..1730579PHAGE_Entero_BP_4795_NC_004813: putative structural component; NCTC9097_01913; phage(gi157166047)2.78e-103Showinfo_outline
721730576..1730920PHAGE_Entero_BP_4795_NC_004813: putative structural component; NCTC9097_01914; phage(gi157166048)1.26e-78Showinfo_outline
731730986..1731702PHAGE_Entero_BP_4795_NC_004813: putative major tail subunit; NCTC9097_01915; phage(gi157166049)1.43e-174Showinfo_outline
741731708..1732082PHAGE_Entero_BP_4795_NC_004813: putative tail assembly chaperone; NCTC9097_01916; phage(gi157166050)8.09e-85Showinfo_outline
751732178..1732387PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; NCTC9097_01917; phage(gi157166051)3.12e-43Showinfo_outline
761732435..1735677PHAGE_Entero_BP_4795_NC_004813: putative tail component; NCTC9097_01918; phage(gi157166052)0.0Showinfo_outline
771735670..1736011PHAGE_Entero_BP_4795_NC_004813: putative minor tail protein; NCTC9097_01919; phage(gi157166053)5.54e-77Showinfo_outline
781736217..1737350outer membrane porin protein from phage origin; NCTC9097_019200.0Showinfo_outline
791737549..1738247PHAGE_Entero_BP_4795_NC_004813: putative tail fiber component; NCTC9097_01921; phage(gi157166054)1.16e-161Showinfo_outline
80complement(1738304..1738840)PHAGE_Strept_315.1_NC_004584: head maturation protease; NCTC9097_01922; phage(gi28876177)2.81e-07Showinfo_outline
81complement(1738840..1739088)PHAGE_Salmon_SE1_NC_011802: Mnt; NCTC9097_01923; phage(gi219681257)2.07e-07Showinfo_outline
821739400..1740329PHAGE_Salmon_vB_SemP_Emek_NC_018275: antirepressor; NCTC9097_01925; phage(gi399498814)0.0Showinfo_outline
831740384..1741121PHAGE_Entero_BP_4795_NC_004813: putative tail fiber component; NCTC9097_01926; phage(gi157166055)6.24e-173Showinfo_outline
841741118..1741699PHAGE_Entero_BP_4795_NC_004813: putative tail component; NCTC9097_01927; phage(gi157166056)6.98e-132Showinfo_outline
851741940..1745413PHAGE_Entero_BP_4795_NC_004813: putative tail component; NCTC9097_01928; phage(gi157166057)0.0Showinfo_outline
861745481..1746080PHAGE_Entero_BP_4795_NC_004813: outer membrane protein Lom precursor; NCTC9097_01929; phage(gi157166058)4.59e-132Showinfo_outline
871746145..1747713PHAGE_Entero_BP_4795_NC_004813: putative tail fiber protein; NCTC9097_01930; phage(gi157166060)0.0Showinfo_outline
881747799..1748311PHAGE_Escher_P13374_NC_018846: tail fibre adesine; NCTC9097_01931; phage(gi410491661)3.49e-112Showinfo_outline
89complement(1749200..1749448)PHAGE_Entero_BP_4795_NC_004813: putative damage-inducible protein DinI; NCTC9097_01932; phage(gi157166070)7.37e-35Showinfo_outline
901749674..1749694attR0.0Showinfo_outline
911749963..1751648PHAGE_Entero_YYZ_2008_NC_011356: putative 2-component sensor protein YehU; NCTC9097_01933; phage(gi209427798)0.0Showinfo_outline

Region 2, total 17 CDS

#CDS PositionBLAST HitE-ValueSequence
11835554..1836951PHAGE_Cronob_vB_CskP_GAP227_NC_020078: putative tail fiber protein; NCTC9097_02012; phage(gi448260265)1.21e-16Showinfo_outline
21837086..1837976PHAGE_Bacill_SP_15_NC_031245: hypothetical protein; NCTC9097_02013; phage(gi100148)6.89e-60Showinfo_outline
3complement(1838150..1838527)PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; NCTC9097_02014; phage(gi557307573)4.00e-87Showinfo_outline
41838599..1838814Insertion element protein; NCTC9097_020150.0Showinfo_outline
51839159..1840247PHAGE_Entero_phi92_NC_023693: Phi92_gp067; NCTC9097_02016; phage(gi726647000)8.89e-119Showinfo_outline
61840261..1841127PHAGE_Entero_phi92_NC_023693: Phi92_gp066; NCTC9097_02017; phage(gi726646999)1.05e-136Showinfo_outline
71841150..1842040PHAGE_Escher_phAPEC8_NC_020079: putative dTDP-4-dehydrorhamnose reductase; NCTC9097_02018; phage(gi448260370)3.91e-33Showinfo_outline
81842058..1842603PHAGE_Entero_phi92_NC_023693: Phi92_gp065; NCTC9097_02019; phage(gi726646998)2.70e-64Showinfo_outline
91842610..1843536glycosyl transferase group 2 family protein; NCTC9097_020200.0Showinfo_outline
101843605..1844366PHAGE_Synech_S_CAM9_NC_031922: hypothetical protein; NCTC9097_02021; phage(gi100182)6.43e-67Showinfo_outline
111844363..1844995Uncharacterised protein; NCTC9097_020220.0Showinfo_outline
121845006..1845167PHAGE_Synech_S_CAM9_NC_031922: hypothetical protein; NCTC9097_02023; phage(gi100182)2.80e-11Showinfo_outline
131845170..1845622PHAGE_Synech_S_CAM9_NC_031922: hypothetical protein; NCTC9097_02024; phage(gi100182)1.79e-23Showinfo_outline
141845648..1846385PHAGE_Synech_S_CAM9_NC_031922: hypothetical protein; NCTC9097_02025; phage(gi100182)5.71e-37Showinfo_outline
151846372..1846692Uncharacterised protein; NCTC9097_020260.0Showinfo_outline
161846835..1847575putative ABC-type polysaccharide transport system; NCTC9097_020270.0Showinfo_outline
171847572..1848297PHAGE_Bacill_G_NC_023719: gp245; NCTC9097_02028; phage(gi593777701)1.61e-06Showinfo_outline

Region 3, total 89 CDS

#CDS PositionBLAST HitE-ValueSequence
1complement(2329285..2329899)PHAGE_Escher_RCS47_NC_042128: RI membrane protein; NCTC9097_02524; phage(gi100135)3.66e-34Showinfo_outline
2complement(2329942..2330796)PHAGE_Escher_RCS47_NC_042128: hypothetical protein; NCTC9097_02525; phage(gi100134)1.64e-23Showinfo_outline
3complement(2330798..2331352)PHAGE_Escher_RCS47_NC_042128: hypothetical protein; NCTC9097_02526; phage(gi100133)1.07e-74Showinfo_outline
42331057..2331068attL0.0Showinfo_outline
5complement(2331390..2332553)PHAGE_Shigel_POCJ13_NC_025434: integrase; NCTC9097_02527; phage(gi725949702)0.0Showinfo_outline
6complement(2332815..2333066)PHAGE_Shigel_POCJ13_NC_025434: hypothetical protein; NCTC9097_02528; phage(gi725949703)1.10e-50Showinfo_outline
7complement(2333118..2333795)PHAGE_Stx2_c_1717_NC_011357: exonuclease; NCTC9097_02529; phage(gi209447136)3.41e-168Showinfo_outline
8complement(2333792..2334577)PHAGE_Shigel_POCJ13_NC_025434: recombinational DNA repair protein; NCTC9097_02530; phage(gi725949705)0.0Showinfo_outline
9complement(2334583..2334879)PHAGE_Shigel_POCJ13_NC_025434: mobile element protein; NCTC9097_02531; phage(gi725949706)1.16e-61Showinfo_outline
10complement(2334876..2335694)PHAGE_Shigel_POCJ13_NC_025434: exodeoxyribonuclease VIII; NCTC9097_02532; phage(gi725949707)8.82e-123Showinfo_outline
11complement(2336751..2338262)PHAGE_Shigel_POCJ13_NC_025434: exodeoxyribonuclease VIII; NCTC9097_02534; phage(gi725949707)0.0Showinfo_outline
12complement(2338370..2338756)PHAGE_Shigel_POCJ13_NC_025434: hypothetical protein; NCTC9097_02535; phage(gi725949708)1.80e-61Showinfo_outline
13complement(2338830..2339051)PHAGE_Shigel_POCJ13_NC_025434: Kil protein; NCTC9097_02536; phage(gi725949709)3.16e-47Showinfo_outline
142339508..2339717Uncharacterised protein; NCTC9097_025370.0Showinfo_outline
15complement(2339686..2340045)PHAGE_Shigel_POCJ13_NC_025434: hypothetical protein; NCTC9097_02538; phage(gi725949710)1.10e-56Showinfo_outline
16complement(2340183..2340464)Uncharacterised protein; NCTC9097_025390.0Showinfo_outline
17complement(2340473..2340778)PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9097_02540; phage(gi100020)1.78e-49Showinfo_outline
182341112..2341333PHAGE_Salmon_118970_sal4_NC_030919: exonuclease A; NCTC9097_02541; phage(gi100018)8.50e-09Showinfo_outline
19complement(2341486..2342055)PHAGE_Shigel_POCJ13_NC_025434: putative transcriptional regulator; NCTC9097_02542; phage(gi725949713)8.44e-26Showinfo_outline
202342304..2342528PHAGE_Escher_PA28_NC_041935: hypothetical protein; NCTC9097_02543; phage(gi100029)2.52e-49Showinfo_outline
212342645..2342941PHAGE_Shigel_POCJ13_NC_025434: hypothetical protein; NCTC9097_02544; phage(gi725949715)5.31e-67Showinfo_outline
222342956..2343084PHAGE_Shigel_POCJ13_NC_025434: hypothetical protein; NCTC9097_02545; phage(gi725949716)3.05e-17Showinfo_outline
232343105..2344187PHAGE_Shigel_POCJ13_NC_025434: primosomal protein I; NCTC9097_02546; phage(gi725949717)0.0Showinfo_outline
242344194..2344934PHAGE_Shigel_POCJ13_NC_025434: DNA replication protein; NCTC9097_02547; phage(gi725949718)9.53e-161Showinfo_outline
252344960..2345730PHAGE_Shigel_POCJ13_NC_025434: hypothetical protein; NCTC9097_02548; phage(gi725949719)2.34e-156Showinfo_outline
262345746..2346141PHAGE_Shigel_POCJ13_NC_025434: LygF; NCTC9097_02549; phage(gi725949780)5.21e-39Showinfo_outline
272346198..2346782PHAGE_Entero_cdtI_NC_009514: Valyl-tRNA synthetase; NCTC9097_02550; phage(gi148609417)8.66e-20Showinfo_outline
282346898..2347002Uncharacterised protein; NCTC9097_025510.0Showinfo_outline
292347613..2347792bacteriophage protein; NCTC9097_025530.0Showinfo_outline
302347811..2348296PHAGE_Staphy_SPbeta_like_NC_029119: Fic/DOC family protein; NCTC9097_02554; phage(gi985761206)6.60e-06Showinfo_outline
31complement(2348347..2348664)PHAGE_Entero_mEp390_NC_019721: prophage repressor; NCTC9097_02555; phage(gi428782701)4.98e-05Showinfo_outline
32complement(2348773..2349027)Uncharacterised protein; NCTC9097_025560.0Showinfo_outline
332349370..2350035PHAGE_Shigel_POCJ13_NC_025434: antirepressor protein; NCTC9097_02559; phage(gi725949727)1.42e-124Showinfo_outline
342350090..2350500PHAGE_Shigel_POCJ13_NC_025434: NinB DNA recombination; NCTC9097_02560; phage(gi725949728)4.99e-96Showinfo_outline
352350954..2351637PHAGE_Entero_VT2_Sakai_NC_000902: similar to antirepressor of bacteriophage P22; NCTC9097_02563; phage(gi9633431)7.33e-145Showinfo_outline
362351712..2352434PHAGE_Entero_VT2_Sakai_NC_000902: roi; NCTC9097_02564; phage(gi9633432)2.68e-159Showinfo_outline
372352434..2352724PHAGE_Shigel_POCJ13_NC_025434: hypothetical protein; NCTC9097_02565; phage(gi725949729)1.62e-64Showinfo_outline
382352721..2353083PHAGE_Shigel_POCJ13_NC_025434: holliday junction resolvase; NCTC9097_02566; phage(gi725949730)1.45e-81Showinfo_outline
392353083..2353277PHAGE_Shigel_POCJ13_NC_025434: hypothetical protein; NCTC9097_02567; phage(gi725949731)2.79e-41Showinfo_outline
402353228..2353704PHAGE_Entero_933W_NC_000924: antitermination protein Q; NCTC9097_02568; phage(gi9632505)2.89e-111Showinfo_outline
412354470..2356380PHAGE_Escher_P13374_NC_018846: hypothetical protein; NCTC9097_02570; phage(gi410491642)0.0Showinfo_outline
422356727..2356972PHAGE_Escher_P13374_NC_018846: hypothetical protein; NCTC9097_02571; phage(gi410491644)3.07e-45Showinfo_outline
432357049..2357264PHAGE_Shigel_Stx_NC_029120: holin lysis protein S; NCTC9097_02572; phage(gi985761286)1.00e-45Showinfo_outline
442357269..2357802PHAGE_Shigel_POCJ13_NC_025434: lysin; Qin; phage prophage; NCTC9097_02573(gi725949741)2.50e-117Showinfo_outline
452358023..2358136putative transmembrane protein; NCTC9097_025740.0Showinfo_outline
462358138..2358596PHAGE_Shigel_POCJ13_NC_025434: outer membrane lytic protein Rz; NCTC9097_02575; phage(gi725949743)1.26e-79Showinfo_outline
47complement(2358677..2359258)lipopolysaccharide core heptose(II)-phosphate phosphatase; NCTC9097_025760.0Showinfo_outline
482359860..2360675PHAGE_Escher_P13374_NC_018846: phage terminase small subunit; NCTC9097_02577; phage(gi410491651)1.36e-140Showinfo_outline
492360656..2362362PHAGE_Shigel_POCJ13_NC_025434: hypothetical protein; NCTC9097_02578; phage(gi725949748)0.0Showinfo_outline
502362362..2364506PHAGE_Shigel_POCJ13_NC_025434: hypothetical protein; NCTC9097_02579; phage(gi725949749)0.0Showinfo_outline
512364664..2365671PHAGE_Shigel_POCJ13_NC_025434: hypothetical protein; NCTC9097_02580; phage(gi725949750)0.0Showinfo_outline
522365694..2366908PHAGE_Shigel_POCJ13_NC_025434: hypothetical protein; NCTC9097_02581; phage(gi725949751)0.0Showinfo_outline
532366963..2367352PHAGE_Stx2_c_86_NC_008464: hypothetical protein; NCTC9097_02582; phage(gi116222009)2.14e-85Showinfo_outline
542367403..2367864PHAGE_Escher_PA28_NC_041935: hypothetical protein; NCTC9097_02583; phage(gi100073)5.05e-97Showinfo_outline
552367848..2368411PHAGE_Shigel_POCJ13_NC_025434: hypothetical protein; NCTC9097_02584; phage(gi725949754)1.94e-131Showinfo_outline
562368411..2368773PHAGE_Escher_PA28_NC_041935: co-chaperonin for GroEL; NCTC9097_02585; phage(gi100075)4.94e-75Showinfo_outline
572370141..2370374PHAGE_Escher_phi191_NC_028660: hypothetical protein; NCTC9097_02587; phage(gi966198097)1.94e-48Showinfo_outline
582370371..2372467PHAGE_Escher_P13374_NC_018846: phage tail fibre; NCTC9097_02588; phage(gi410491660)0.0Showinfo_outline
592372553..2373065PHAGE_Escher_P13374_NC_018846: tail fibre adesine; NCTC9097_02589; phage(gi410491661)3.49e-112Showinfo_outline
60complement(2373155..2374726)PHAGE_Stx2_c_1717_NC_011357: transposase; NCTC9097_02590; phage(gi209447153)0.0Showinfo_outline
61complement(2374746..2375093)PHAGE_Stx2_c_1717_NC_011357: transposase; NCTC9097_02591; phage(gi209447152)4.31e-57Showinfo_outline
62complement(2375093..2375299)transposase; NCTC9097_025920.0Showinfo_outline
63complement(2375364..2376965)PHAGE_Stx2_c_1717_NC_011357: transposase; NCTC9097_02593; phage(gi209447153)0.0Showinfo_outline
64complement(2376985..2377332)PHAGE_Stx2_c_1717_NC_011357: transposase; NCTC9097_02594; phage(gi209447152)5.12e-54Showinfo_outline
65complement(2377329..2378006)PHAGE_Stx2_c_1717_NC_011357: truncated transposase; NCTC9097_02595; phage(gi209447151)3.19e-10Showinfo_outline
662379168..2380793PHAGE_Shigel_Stx_NC_029120: hypothetical protein; NCTC9097_02596; phage(gi985761304)0.0Showinfo_outline
672380790..2382064PHAGE_Entero_Min27_NC_010237: hypothetical protein; NCTC9097_02597; phage(gi170783675)0.0Showinfo_outline
682382079..2382357PHAGE_Shigel_POCJ13_NC_025434: putative outer membrane protein; NCTC9097_02598; phage(gi725949762)1.11e-59Showinfo_outline
692382543..2382980PHAGE_Shigel_POCJ13_NC_025434: hypothetical protein; NCTC9097_02599; phage(gi725949763)5.29e-101Showinfo_outline
702383107..2383844PHAGE_Shigel_POCJ13_NC_025434: attachment invasion locus protein precursor; NCTC9097_02600; phage(gi725949764)4.34e-118Showinfo_outline
712384077..2384217PHAGE_Escher_P13374_NC_018846: prophage host toxic membrane protein; NCTC9097_02601; phage(gi410491667)6.21e-27Showinfo_outline
722384274..2384675PHAGE_Shigel_POCJ13_NC_025434: hypothetical protein; NCTC9097_02602; phage(gi725949766)1.01e-93Showinfo_outline
732384767..2385423PHAGE_Shigel_POCJ13_NC_025434: hypothetical protein; NCTC9097_02603; phage(gi725949767)4.72e-151Showinfo_outline
742385426..2385872PHAGE_Escher_PA28_NC_041935: DNA ligase; NCTC9097_02604; phage(gi100090)2.22e-100Showinfo_outline
752385882..2386133PHAGE_Entero_933W_NC_000924: hypothetical protein; NCTC9097_02605; phage(gi9632536)1.34e-45Showinfo_outline
762386144..2387409PHAGE_Shigel_POCJ13_NC_025434: hypothetical protein; NCTC9097_02606; phage(gi725949770)0.0Showinfo_outline
772387478..2395829PHAGE_Stx2_c_86_NC_008464: hypothetical protein; NCTC9097_02607; phage(gi116222027)0.0Showinfo_outline
782395953..2396144PHAGE_Shigel_POCJ13_NC_025434: hypothetical protein; NCTC9097_02608; phage(gi725949772)3.45e-36Showinfo_outline
79complement(2396231..2396959)PHAGE_Shigel_POCJ13_NC_025434: EaA protein; NCTC9097_02609; phage(gi725949774)2.75e-58Showinfo_outline
80complement(2396956..2397471)PHAGE_Shigel_Ss_VASD_NC_028685: hypothetical protein; NCTC9097_02610; phage(gi966200434)6.97e-127Showinfo_outline
81complement(2397473..2398117)PHAGE_Shigel_Ss_VASD_NC_028685: hypothetical protein; NCTC9097_02611; phage(gi966200435)2.39e-141Showinfo_outline
82complement(2398295..2398579)PHAGE_Shigel_POCJ13_NC_025434: hypothetical protein; NCTC9097_02612; phage(gi725949777)2.58e-64Showinfo_outline
83complement(2398576..2398797)PHAGE_Entero_VT2_Sakai_NC_000902: DksA-like zinc finger domain containing protein; NCTC9097_02613; phage(gi9633475)1.23e-46Showinfo_outline
842398874..2398885attR0.0Showinfo_outline
85complement(2399027..2400646)PHAGE_Escher_RCS47_NC_042128: hypothetical protein; NCTC9097_02614; phage(gi100132)1.22e-145Showinfo_outline
86complement(2400734..2403160)PHAGE_Escher_RCS47_NC_042128: hypothetical protein; NCTC9097_02615; phage(gi100132)0.0Showinfo_outline
87complement(2403359..2403664)protein; NCTC9097_026160.0Showinfo_outline
882403736..2404482lipoprotein; NCTC9097_026170.0Showinfo_outline
89complement(2404485..2405045)PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; NCTC9097_02618; phage(gi9630137)9.67e-09Showinfo_outline

Region 4, total 17 CDS

#CDS PositionBLAST HitE-ValueSequence
12407313..2408332PHAGE_Synech_S_SM2_NC_015279: zinc-containing alcohol dehydrogenase superfamily protein; NCTC9097_02623; phage(gi326781942)2.32e-18Showinfo_outline
22408293..2408305attL0.0Showinfo_outline
32408390..2408518protein, truncated; NCTC9097_026240.0Showinfo_outline
4complement(2408520..2409800)PHAGE_Entero_YYZ_2008_NC_011356: putative integrase; Qin; phage prophage; NCTC9097_02625(gi209427727)0.0Showinfo_outline
5complement(2409835..2410071)PHAGE_Entero_YYZ_2008_NC_011356: putative excisionase; NCTC9097_02626; phage(gi209427728)2.88e-18Showinfo_outline
6complement(2410258..2411238)PHAGE_Bacill_BMBtpLA_NC_028748: IS5 transposase and trans-activator; NCTC9097_02627; phage(gi971482498)0.0Showinfo_outline
7complement(2411359..2413830)PHAGE_Salmon_118970_sal3_NC_031940: baseplate hub subunit; NCTC9097_02628; phage(gi100107)3.46e-68Showinfo_outline
8complement(2413924..2414115)putative prophage protein; NCTC9097_026290.0Showinfo_outline
9complement(2414112..2414300)division inhibition protein; NCTC9097_026300.0Showinfo_outline
10complement(2414787..2415362)putative prophage protein; NCTC9097_026320.0Showinfo_outline
11complement(2415364..2415519)PHAGE_Salico_CGphi29_NC_020844: hypothetical protein; NCTC9097_02633; phage(gi472340166)5.92e-12Showinfo_outline
12complement(2415712..2416170)PHAGE_Cronob_phiES15_NC_018454: putative transcriptional repressor DicA; NCTC9097_02634; phage(gi401817574)1.14e-34Showinfo_outline
132416197..2416424PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9097_02635; phage(gi100022)1.63e-12Showinfo_outline
142416408..2416929PHAGE_Pectob_ZF40_NC_019522: putative cII repressor; NCTC9097_02636; phage(gi422936652)3.27e-05Showinfo_outline
152416910..2417875PHAGE_Shigel_SfIV_NC_022749: replication protein; NCTC9097_02637; phage(gi557307567)3.04e-71Showinfo_outline
162417916..2418317PHAGE_Shigel_Stx_NC_029120: LygF; NCTC9097_02638; phage(gi985761265)5.03e-62Showinfo_outline
172423461..2423473attR0.0Showinfo_outline

Region 5, total 39 CDS

#CDS PositionBLAST HitE-ValueSequence
12422683..2422934putative prophage protein; NCTC9097_026430.0Showinfo_outline
22423001..2423279PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; NCTC9097_02644; phage(gi401817580)2.67e-14Showinfo_outline
32423281..2424330PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC9097_02645; phage(gi428782365)3.88e-133Showinfo_outline
42424343..2424717PHAGE_Shigel_Stx_NC_029120: crossover junction endodeoxyribonuclease rusA; NCTC9097_02646; phage(gi985761276)2.92e-46Showinfo_outline
52424714..2425535PHAGE_Entero_HK225_NC_019717: late gene regulator Q; NCTC9097_02647; phage(gi428782441)1.03e-112Showinfo_outline
62425679..2425754tRNA0.0Showinfo_outline
72425855..2425931tRNA0.0Showinfo_outline
82426929..2427357TolA protein (fragment) of prophage; NCTC9097_026510.0Showinfo_outline
92427508..2427903tolA protein (fragment) of prophage; NCTC9097_026520.0Showinfo_outline
102428155..2428370PHAGE_Entero_mEp460_NC_019716: porin; NCTC9097_02653; phage(gi428782370)3.75e-44Showinfo_outline
112428375..2428689PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC9097_02654; phage(gi428782371)3.48e-68Showinfo_outline
122428745..2429278PHAGE_Entero_mEp460_NC_019716: endolysin; Qin; phage prophage; NCTC9097_02655(gi428782372)9.35e-124Showinfo_outline
132429577..2430041PHAGE_Entero_DE3_NC_042057: hypothetical protein; DLP12; phage prophage; NCTC9097_02656(gi100031)1.48e-86Showinfo_outline
14complement(2430361..2430771)PHAGE_Entero_lambda_NC_001416: putative envelope protein; NCTC9097_02657; phage(gi19263396)1.56e-74Showinfo_outline
152431059..2431265PHAGE_Entero_DE3_NC_042057: membrane-associated initiation of head vertex; predicted; phage protein; NCTC9097_02658(gi100034)5.68e-33Showinfo_outline
16complement(2431656..2432351)PHAGE_Stx2_c_1717_NC_011357: transposase; NCTC9097_02659; phage(gi209447153)2.66e-99Showinfo_outline
17complement(2433761..2434459)PHAGE_Stx2_c_1717_NC_011357: transposase; NCTC9097_02661; phage(gi209447153)1.21e-38Showinfo_outline
18complement(2434479..2434772)PHAGE_Stx2_c_1717_NC_011357: transposase; NCTC9097_02662; phage(gi209447152)1.98e-42Showinfo_outline
19complement(2434717..2435499)PHAGE_Stx2_c_1717_NC_011357: truncated transposase; NCTC9097_02663; phage(gi209447151)6.79e-10Showinfo_outline
202435904..2436431PHAGE_Entero_mEp460_NC_019716: terminase small subunit; NCTC9097_02664; phage(gi428782317)2.99e-26Showinfo_outline
212436440..2438539PHAGE_Entero_mEp460_NC_019716: terminase large subunit; NCTC9097_02665; phage(gi428782318)0.0Showinfo_outline
222438536..2438748PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC9097_02666; phage(gi428782319)9.56e-46Showinfo_outline
232438748..2440256PHAGE_Entero_mEp460_NC_019716: portal protein; NCTC9097_02667; phage(gi428782320)0.0Showinfo_outline
242440201..2442228PHAGE_Entero_mEp460_NC_019716: putative protease/scaffold protein; NCTC9097_02668; phage(gi428782321)0.0Showinfo_outline
252442314..2442637PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC9097_02669; phage(gi428782322)8.50e-70Showinfo_outline
262442630..2442905PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC9097_02670; phage(gi428782323)2.82e-62Showinfo_outline
272442917..2443495PHAGE_Entero_mEp460_NC_019716: minor tail protein; NCTC9097_02671; phage(gi428782324)2.63e-135Showinfo_outline
282443492..2443893PHAGE_Entero_mEp460_NC_019716: minor tail protein; NCTC9097_02672; phage(gi428782325)8.43e-95Showinfo_outline
292443905..2444648PHAGE_Entero_mEp460_NC_019716: major tail protein; NCTC9097_02673; phage(gi428782326)1.21e-173Showinfo_outline
302444709..2445095PHAGE_Entero_mEp460_NC_019716: minor tail protein; NCTC9097_02674; phage(gi428782327)4.05e-85Showinfo_outline
312445104..2445433PHAGE_Entero_mEp460_NC_019716: tail assembly protein; NCTC9097_02675; phage(gi428782328)6.79e-75Showinfo_outline
322445405..2446772PHAGE_Entero_mEp460_NC_019716: tail length tape measure protein; NCTC9097_02676; phage(gi428782329)0.0Showinfo_outline
332446846..2448468PHAGE_Entero_mEp460_NC_019716: tail length tape measure protein; NCTC9097_02677; phage(gi428782329)0.0Showinfo_outline
342448468..2448797PHAGE_Entero_mEp460_NC_019716: minor tail protein; NCTC9097_02678; phage(gi428782330)2.09e-76Showinfo_outline
352448807..2449505PHAGE_Entero_mEp460_NC_019716: minor tail protein; NCTC9097_02679; phage(gi428782331)1.32e-175Showinfo_outline
362449655..2450254PHAGE_Entero_mEp460_NC_019716: tail fiber component; NCTC9097_02680; phage(gi428782332)2.04e-138Showinfo_outline
372450251..2450799PHAGE_Entero_mEp460_NC_019716: tail assembly protein; NCTC9097_02681; phage(gi428782333)7.18e-128Showinfo_outline
382450860..2453199PHAGE_Entero_mEp460_NC_019716: host specificity protein; NCTC9097_02682; phage(gi428782334)0.0Showinfo_outline
392453576..2454622PROPHAGE_Escher_MG1655: IS30 transposase; NCTC9097_02684; phage(gi16132105)0.0Showinfo_outline

Region 6, total 77 CDS

#CDS PositionBLAST HitE-ValueSequence
12768444..2768455attL0.0Showinfo_outline
22770166..2770185attL0.0Showinfo_outline
3complement(2772515..2775586)PROPHAGE_Escher_MG1655: Qin prophage; predicted side tail fibre assembly protein; NCTC9097_02978; phage(gi16129506)8.41e-180Showinfo_outline
4complement(2775651..2776250)PHAGE_Entero_BP_4795_NC_004813: outer membrane protein Lom precursor; NCTC9097_02979; phage(gi157166058)3.19e-122Showinfo_outline
5complement(2776318..2779791)PHAGE_Entero_BP_4795_NC_004813: putative tail component; NCTC9097_02980; phage(gi157166057)0.0Showinfo_outline
6complement(2780034..2780714)PHAGE_Entero_BP_4795_NC_004813: putative tail component; NCTC9097_02981; phage(gi157166056)8.12e-159Showinfo_outline
72780759..2781340Uncharacterised protein; NCTC9097_029820.0Showinfo_outline
8complement(2781366..2782064)PHAGE_Entero_BP_4795_NC_004813: putative tail fiber component; NCTC9097_02983; phage(gi157166054)1.30e-164Showinfo_outline
9complement(2782064..2782405)PHAGE_Entero_BP_4795_NC_004813: putative minor tail protein; NCTC9097_02984; phage(gi157166053)6.12e-78Showinfo_outline
10complement(2782398..2785640)PHAGE_Entero_BP_4795_NC_004813: putative tail component; NCTC9097_02985; phage(gi157166052)0.0Showinfo_outline
11complement(2785688..2785897)PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; NCTC9097_02986; phage(gi157166051)3.12e-43Showinfo_outline
12complement(2786067..2786366)PHAGE_Entero_BP_4795_NC_004813: putative tail assembly chaperone; NCTC9097_02987; phage(gi157166050)3.34e-64Showinfo_outline
13complement(2786381..2787097)PHAGE_Entero_BP_4795_NC_004813: putative major tail subunit; NCTC9097_02988; phage(gi157166049)7.51e-157Showinfo_outline
14complement(2787162..2787506)PHAGE_Entero_BP_4795_NC_004813: putative structural component; NCTC9097_02989; phage(gi157166048)1.26e-78Showinfo_outline
15complement(2787503..2787949)PHAGE_Entero_BP_4795_NC_004813: putative structural component; NCTC9097_02990; phage(gi157166047)3.61e-103Showinfo_outline
16complement(2787946..2788296)PHAGE_Entero_BP_4795_NC_004813: putative head-tail adaptor; NCTC9097_02991; phage(gi157166046)2.66e-78Showinfo_outline
17complement(2788306..2788632)PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; NCTC9097_02992; phage(gi157166045)1.22e-72Showinfo_outline
18complement(2788629..2791214)PHAGE_Entero_BP_4795_NC_004813: putative portal protein; NCTC9097_02993; phage(gi157166043)0.0Showinfo_outline
19complement(2791160..2791381)PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; NCTC9097_02994; phage(gi157166042)1.77e-47Showinfo_outline
20complement(2791426..2793363)PHAGE_Entero_BP_4795_NC_004813: putative major head protein/prohead protease; NCTC9097_02995; phage(gi157166041)0.0Showinfo_outline
21complement(2793427..2795088)PHAGE_Entero_BP_4795_NC_004813: putative large subunit terminase; NCTC9097_02996; phage(gi157166040)0.0Showinfo_outline
22complement(2795085..2795648)PHAGE_Entero_BP_4795_NC_004813: putative small subunit terminase; NCTC9097_02997; phage(gi157166039)1.65e-116Showinfo_outline
23complement(2795939..2796304)PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; NCTC9097_02998; phage(gi157166038)2.05e-77Showinfo_outline
242796346..2796546PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; NCTC9097_02999; phage(gi157166037)8.66e-27Showinfo_outline
25complement(2796745..2796969)Uncharacterised protein; NCTC9097_030000.0Showinfo_outline
26complement(2796966..2797460)PHAGE_Escher_TL_2011c_NC_019442: hypothetical protein; NCTC9097_03001; phage(gi418487099)8.83e-95Showinfo_outline
27complement(2797679..2797810)PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; NCTC9097_03002; phage(gi157166035)3.50e-10Showinfo_outline
28complement(2798103..2798636)PHAGE_Entero_BP_4795_NC_004813: putative R protein; Qin; phage prophage; NCTC9097_03003(gi157166033)4.91e-124Showinfo_outline
292798742..2799014ybl58; NCTC9097_030040.0Showinfo_outline
30complement(2798980..2799324)PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; NCTC9097_03005; phage(gi157166032)6.19e-47Showinfo_outline
31complement(2799329..2799544)PHAGE_Shigel_Ss_VASD_NC_028685: holin lysis protein S; NCTC9097_03006; phage(gi966200466)1.22e-45Showinfo_outline
32complement(2799695..2801548)PHAGE_Entero_BP_4795_NC_004813: hypothetical protein YjhS; NCTC9097_03007; phage(gi157166028)0.0Showinfo_outline
332801809..2802144PHAGE_Stx2_c_1717_NC_011357: hypothetical protein; NCTC9097_03008; phage(gi209447168)2.66e-54Showinfo_outline
34complement(2803056..2803132)tRNA0.0Showinfo_outline
35complement(2803233..2803308)tRNA0.0Showinfo_outline
36complement(2803358..2804407)PHAGE_Entero_phiP27_NC_003356: putative DNA methylase; NCTC9097_03012; phage(gi18249888)0.0Showinfo_outline
37complement(2804558..2804755)PHAGE_Entero_phiP27_NC_003356: hypothetical protein; NCTC9097_03013; phage(gi18249887)6.50e-42Showinfo_outline
38complement(2804982..2805803)PHAGE_Entero_HK225_NC_019717: late gene regulator Q; NCTC9097_03014; phage(gi428782441)3.89e-114Showinfo_outline
39complement(2805800..2806180)PHAGE_Shigel_Stx_NC_029120: crossover junction endodeoxyribonuclease rusA; NCTC9097_03015; phage(gi985761276)6.68e-47Showinfo_outline
40complement(2806181..2807239)PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC9097_03016; phage(gi428782365)4.11e-108Showinfo_outline
412807322..2807570Uncharacterised protein; NCTC9097_030170.0Showinfo_outline
42complement(2807928..2810192)PHAGE_Brevib_Jimmer2_NC_041976: sliding clamp DNA polymerase; NCTC9097_03018; phage(gi100042)1.83e-06Showinfo_outline
43complement(2810167..2811321)PHAGE_Acidia_virus_NC_029316: AAA+ ATPase; NCTC9097_03019; phage(gi1002166819)1.28e-12Showinfo_outline
44complement(2811297..2811518)Uncharacterised protein; NCTC9097_030200.0Showinfo_outline
45complement(2811515..2811946)PHAGE_Shigel_Stx_NC_029120: LygF; NCTC9097_03021; phage(gi985761265)1.19e-62Showinfo_outline
46complement(2811987..2812949)PHAGE_Shigel_SfIV_NC_022749: replication protein; NCTC9097_03022; phage(gi557307567)1.20e-125Showinfo_outline
47complement(2812972..2813370)PHAGE_Pectob_ZF40_NC_019522: putative cII repressor; NCTC9097_03023; phage(gi422936652)3.82e-07Showinfo_outline
48complement(2814694..2815017)PHAGE_Aggreg_S1249_NC_013597: RNA polymerase sigma factor; NCTC9097_03025; phage(gi100049)6.73e-18Showinfo_outline
492815142..2815618Rac prophage; putative DNA-binding transcriptional regulator; NCTC9097_030260.0Showinfo_outline
502815937..2816089PHAGE_Salico_CGphi29_NC_020844: hypothetical protein; NCTC9097_03027; phage(gi472340166)9.73e-11Showinfo_outline
512816101..2816502PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; NCTC9097_03028; phage(gi401817573)4.63e-15Showinfo_outline
52complement(2816462..2816740)Uncharacterised protein; NCTC9097_030290.0Showinfo_outline
532817300..2817488cell division inhibition protein; NCTC9097_030310.0Showinfo_outline
542817485..2817676putative prophage protein; NCTC9097_030320.0Showinfo_outline
552817769..2820240PHAGE_Salmon_118970_sal3_NC_031940: baseplate hub subunit; NCTC9097_03033; phage(gi100107)9.14e-67Showinfo_outline
562820531..2821661PHAGE_Entero_HK022_NC_002166: integrase; NCTC9097_03034; phage(gi9634144)5.76e-68Showinfo_outline
572821705..2821724attR0.0Showinfo_outline
58complement(2821707..2822345)outer membrane protein W; NCTC9097_030350.0Showinfo_outline
592822702..2823445membrane protein YciC; NCTC9097_030360.0Showinfo_outline
602823475..2824014putative intracellular septation protein; NCTC9097_030370.0Showinfo_outline
612824119..2824517putative acyl-coA thioester hydrolase; NCTC9097_030380.0Showinfo_outline
62complement(2824557..2825312)transport protein TonB; NCTC9097_030390.0Showinfo_outline
632825367..2826887PHAGE_Entero_phiFL1A_NC_013646: integrase; NCTC9097_03040; phage(gi281416324)1.08e-08Showinfo_outline
64complement(2826920..2827690)PHAGE_Salmon_BPS15Q2_NC_031939: hypothetical protein; NCTC9097_03041; phage(gi100038)1.84e-128Showinfo_outline
65complement(2827854..2829971)PHAGE_Escher_EC6_NC_027369: Mu-like prophage protein; NCTC9097_03042; phage(gi849122054)1.30e-62Showinfo_outline
66complement(2830089..2830304)Uncharacterised protein; NCTC9097_030430.0Showinfo_outline
67complement(2830327..2831031)Uncharacterised protein; NCTC9097_030440.0Showinfo_outline
682831218..2831229attR0.0Showinfo_outline
69complement(2831579..2831902)Uncharacterised protein; NCTC9097_030450.0Showinfo_outline
70complement(2832059..2832346)PHAGE_Sulfit_EE36phi1_NC_012696: hypothetical protein; NCTC9097_03046; phage(gi237651511)9.90e-05Showinfo_outline
71complement(2832343..2832630)PHAGE_Escher_PA28_NC_041935: hypothetical protein; NCTC9097_03047; phage(gi100080)1.64e-10Showinfo_outline
72complement(2833871..2834158)Uncharacterised protein; NCTC9097_030490.0Showinfo_outline
73complement(2834160..2834714)Uncharacterised protein; NCTC9097_030500.0Showinfo_outline
742835014..2835190Uncharacterised protein; NCTC9097_030510.0Showinfo_outline
752835334..2835345attL0.0Showinfo_outline
76complement(2836615..2837166)PHAGE_Clostr_vB_CpeS_CP51_NC_021325: putative resolvase; NCTC9097_03052; phage(gi509140089)4.00e-31Showinfo_outline
772837538..2837549attR0.0Showinfo_outline

Region 7, total 69 CDS

#CDS PositionBLAST HitE-ValueSequence
1complement(2951364..2954399)PHAGE_Entero_9g_NC_024146: side tail fiber; NCTC9097_03171; phage(gi640885143)0.0Showinfo_outline
22952535..2952547attL0.0Showinfo_outline
3complement(2954464..2955063)PHAGE_Entero_cdtI_NC_009514: putative Lom-like outer membrane protein; NCTC9097_03172; phage(gi148609401)2.09e-138Showinfo_outline
4complement(2955131..2958604)PHAGE_Entero_DE3_NC_042057: recombination endonuclease subunit; NCTC9097_03173; phage(gi100054)0.0Showinfo_outline
5complement(2958947..2959528)PHAGE_Stx2_c_1717_NC_011357: putative tail component; NCTC9097_03174; phage(gi209447195)5.67e-132Showinfo_outline
6complement(2959525..2960268)PHAGE_Entero_BP_4795_NC_004813: putative tail fiber component; NCTC9097_03175; phage(gi157166055)0.0Showinfo_outline
7complement(2960279..2960977)PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9097_03176; phage(gi100051)1.67e-136Showinfo_outline
8complement(2960977..2961306)PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9097_03177; phage(gi100050)8.87e-58Showinfo_outline
9complement(2961303..2963876)PHAGE_Entero_DE3_NC_042057: RNA polymerase sigma factor; NCTC9097_03178; phage(gi100049)0.0Showinfo_outline
10complement(2963857..2964270)PHAGE_Entero_DE3_NC_042057: rnaseH; NCTC9097_03179; phage(gi100048)3.60e-59Showinfo_outline
11complement(2964297..2964728)PHAGE_Entero_DE3_NC_042057: dsDNA binding protein; NCTC9097_03180; phage(gi100047)7.93e-59Showinfo_outline
12complement(2964742..2965494)PHAGE_Entero_DE3_NC_042057: late promoter transcription; NCTC9097_03181; phage(gi100046)1.95e-139Showinfo_outline
13complement(2965502..2965897)PHAGE_Entero_DE3_NC_042057: loader of DNA helicase; NCTC9097_03182; phage(gi100045)2.21e-73Showinfo_outline
14complement(2965894..2966469)PHAGE_Entero_DE3_NC_042057: ssDNA binding protein; NCTC9097_03183; phage(gi100044)2.00e-66Showinfo_outline
15complement(2966484..2966837)PHAGE_Entero_DE3_NC_042057: RNA polymerase binding protein; NCTC9097_03184; phage(gi100043)2.87e-52Showinfo_outline
16complement(2966830..2967198)PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage accessory DNA packaging protein; Lambda FI homolog; NCTC9097_03185; phage(gi169257229)1.15e-10Showinfo_outline
17complement(2967250..2968278)PHAGE_Entero_DE3_NC_042057: clamp-loader subunit; NCTC9097_03186; phage(gi100041)2.70e-146Showinfo_outline
18complement(2968336..2968683)PHAGE_Entero_DE3_NC_042057: clamp-loader subunit; NCTC9097_03187; phage(gi100040)4.12e-29Showinfo_outline
19complement(2968720..2970225)PHAGE_Entero_DE3_NC_042057: RegA; NCTC9097_03188; phage(gi100039)6.53e-133Showinfo_outline
20complement(2970215..2971807)PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9097_03189; phage(gi100038)0.0Showinfo_outline
21complement(2971804..2972010)PHAGE_Entero_HK225_NC_019717: head-tail connector gpW; NCTC9097_03190; phage(gi428782379)1.09e-17Showinfo_outline
22complement(2971994..2973922)PHAGE_Entero_DE3_NC_042057: DNA polymerase; terminase; phage large subunit; NCTC9097_03191(gi100036)0.0Showinfo_outline
23complement(2973894..2974442)PHAGE_Entero_DE3_NC_042057: RecA-like recombination protein; NCTC9097_03192; phage(gi100035)1.94e-63Showinfo_outline
24complement(2974844..2975248)Uncharacterised protein; NCTC9097_031930.0Showinfo_outline
25complement(2975385..2975609)Uncharacterised protein; NCTC9097_031940.0Showinfo_outline
26complement(2975703..2975990)Uncharacterised protein; NCTC9097_031950.0Showinfo_outline
27complement(2976069..2976221)PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC9097_03196; phage(gi428782374)3.78e-28Showinfo_outline
28complement(2976209..2976676)PHAGE_Salmon_118970_sal4_NC_030919: clamp-loader subunit; NCTC9097_03197; phage(gi100040)1.55e-85Showinfo_outline
29complement(2976895..2977026)PHAGE_Escher_phi191_NC_028660: hypothetical protein; NCTC9097_03198; phage(gi966198023)3.42e-13Showinfo_outline
30complement(2977319..2977852)PHAGE_Entero_BP_4795_NC_004813: putative R protein; Qin; phage prophage; NCTC9097_03199(gi157166033)1.74e-126Showinfo_outline
31complement(2977895..2978701)PHAGE_Stx2_c_86_NC_008464: hypothetical protein; NCTC9097_03200; phage(gi116221997)0.0Showinfo_outline
32complement(2978706..2978921)PHAGE_Shigel_Ss_VASD_NC_028685: holin lysis protein S; NCTC9097_03201; phage(gi966200466)1.22e-45Showinfo_outline
33complement(2979071..2980924)PHAGE_Entero_YYZ_2008_NC_011356: hypothetical protein; NCTC9097_03202; phage(gi209427766)0.0Showinfo_outline
34complement(2981414..2981490)tRNA0.0Showinfo_outline
35complement(2981504..2981580)tRNA0.0Showinfo_outline
36complement(2981588..2981663)tRNA0.0Showinfo_outline
37complement(2981713..2982762)PHAGE_Entero_phiP27_NC_003356: putative DNA methylase; NCTC9097_03207; phage(gi18249888)0.0Showinfo_outline
38complement(2982914..2983234)PHAGE_Entero_phiP27_NC_003356: hypothetical protein; NCTC9097_03208; phage(gi18249887)3.88e-38Showinfo_outline
39complement(2983324..2984013)PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage antiterminator protein Q; NCTC9097_03209; phage(gi169257244)1.56e-87Showinfo_outline
40complement(2984006..2984374)PHAGE_Shigel_Stx_NC_029120: crossover junction endodeoxyribonuclease rusA; NCTC9097_03210; phage(gi985761276)1.05e-46Showinfo_outline
41complement(2984375..2985433)PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; NCTC9097_03211; phage(gi557307571)2.95e-111Showinfo_outline
42complement(2986295..2986474)membrane protein; NCTC9097_032130.0Showinfo_outline
43complement(2986958..2987134)PHAGE_Serrat_vB_Sru_IME250_NC_042047: hypothetical protein; NCTC9097_03214; phage(gi100129)1.71e-13Showinfo_outline
44complement(2987127..2987309)PHAGE_Entero_phiEF24C_NC_009904: hypothetical protein; NCTC9097_03215; phage(gi158079459)1.10e-08Showinfo_outline
452987804..2988784PROPHAGE_Escher_MG1655: IS5 transposase and trans-activator; NCTC9097_03216; phage(gi16129935)0.0Showinfo_outline
46complement(2988937..2989080)Uncharacterised protein; NCTC9097_032170.0Showinfo_outline
47complement(2989091..2989354)PHAGE_Salmon_FSLSP030_NC_021779: hypothetical protein; NCTC9097_03218; phage(gi525972396)3.05e-41Showinfo_outline
48complement(2989356..2989763)PHAGE_Escher_P13374_NC_018846: hypothetical protein; NCTC9097_03219; phage(gi410491607)2.58e-55Showinfo_outline
49complement(2989760..2990275)PHAGE_Shigel_Ss_VASD_NC_028685: hypothetical protein; NCTC9097_03220; phage(gi966200434)6.23e-125Showinfo_outline
50complement(2990277..2991026)PHAGE_Escher_RCS47_NC_042128: baseplate hub assembly protein; NCTC9097_03221; phage(gi100106)4.09e-83Showinfo_outline
51complement(2991023..2991466)PHAGE_Escher_Av_05_NC_025830: hypothetical protein; NCTC9097_03222; phage(gi730985108)1.31e-36Showinfo_outline
52complement(2991463..2991648)PHAGE_Entero_HK106_NC_019768: hypothetical protein; similarities; phage with EA22 from lambda (modular protein involved in blocking host replication); NCTC9097_03223(gi428783311)2.30e-07Showinfo_outline
53complement(2991635..2992129)PHAGE_Pectob_ZF40_NC_019522: putative methylase; NCTC9097_03224; phage(gi422936660)1.32e-83Showinfo_outline
54complement(2992126..2992548)PHAGE_Shigel_Stx_NC_029120: LygF; NCTC9097_03225; phage(gi985761265)1.89e-65Showinfo_outline
55complement(2992589..2993551)PHAGE_Shigel_SfIV_NC_022749: replication protein; NCTC9097_03226; phage(gi557307567)5.98e-126Showinfo_outline
56complement(2993574..2993999)PHAGE_Entero_mEp237_NC_019704: CII protein; NCTC9097_03227; phage(gi435439306)8.92e-07Showinfo_outline
57complement(2993983..2994255)PHAGE_Phage_Gifsy_2_NC_010393: putative bacteriophage regulatory protein; Lambda gpCro analog; NCTC9097_03228; phage(gi169257277)2.05e-19Showinfo_outline
582994365..2994766PHAGE_Salmon_SPN3UB_NC_019545: putative CI; NCTC9097_03229; phage(gi423262424)4.22e-15Showinfo_outline
592994794..2994985Uncharacterised protein; NCTC9097_032300.0Showinfo_outline
602994985..2995272putative plasmid stabilization-like protein from prophage; NCTC9097_032310.0Showinfo_outline
612995467..2995697PHAGE_Salico_CGphi29_NC_020844: hypothetical protein; NCTC9097_03232; phage(gi472340166)4.12e-11Showinfo_outline
622995709..2996047PHAGE_Entero_VT2phi_272_NC_028656: hypothetical protein; NCTC9097_03233; phage(gi966197735)1.66e-10Showinfo_outline
63complement(2996036..2996230)Uncharacterised protein; NCTC9097_032340.0Showinfo_outline
642996797..2996985cell division inhibition protein; NCTC9097_032360.0Showinfo_outline
652996982..2997173putative prophage protein; NCTC9097_032370.0Showinfo_outline
662997266..2999737PHAGE_Salmon_118970_sal3_NC_031940: sliding clamp DNA polymerase; NCTC9097_03238; phage(gi100042)8.37e-70Showinfo_outline
672999648..2999660attR0.0Showinfo_outline
682999799..3000068excisionase for prophage; NCTC9097_032390.0Showinfo_outline
693000037..3001155PHAGE_Entero_HK022_NC_002166: integrase; NCTC9097_03240; phage(gi9634144)9.81e-62Showinfo_outline

Region 8, total 58 CDS

#CDS PositionBLAST HitE-ValueSequence
13081738..3082388PHAGE_Altero_vB_AmaP_AD45_P1_NC_021532: hypothetical protein; NCTC9097_03325; phage(gi514051613)1.42e-05Showinfo_outline
23082393..3082782curli production assembly/transport component; NCTC9097_033260.0Showinfo_outline
33082807..3083223curli production assembly/transport component; NCTC9097_033270.0Showinfo_outline
43083250..3084083PHAGE_Pelagi_HTVC008M_NC_020484: curli production assembly/transport component; NCTC9097_03328; phage(gi460042451)5.19e-52Showinfo_outline
5complement(3084382..3085119)PHAGE_Entero_Mu_NC_000929: Mom; NCTC9097_03329; phage(gi9633544)5.66e-133Showinfo_outline
6complement(3085849..3086049)Uncharacterised protein; NCTC9097_033300.0Showinfo_outline
7complement(3086125..3086379)PHAGE_Escher_TL_2011c_NC_019442: hypothetical protein; NCTC9097_03331; phage(gi418487098)1.21e-08Showinfo_outline
8complement(3086415..3086597)PHAGE_Stx2_vB_EcoP_24B_NC_027984: hypothetical protein; NCTC9097_03332; phage(gi937456280)4.46e-18Showinfo_outline
9complement(3086742..3088796)PHAGE_Entero_BP_4795_NC_004813: hypothetical protein YjhS; NCTC9097_03333; phage(gi157166028)0.0Showinfo_outline
10complement(3088882..3089454)PHAGE_Entero_Mu_NC_000929: Gin; NCTC9097_03334; phage(gi9633542)2.46e-96Showinfo_outline
113089744..3089893PHAGE_Escher_pro147_NC_028896: tail fibers protein; NCTC9097_03335; phage(gi971753729)5.02e-05Showinfo_outline
123089945..3090466PROPHAGE_Escher_Sakai: putative tail fiber assembly protein; NCTC9097_03336; phage(gi15834244)1.50e-81Showinfo_outline
13complement(3090498..3091379)PHAGE_Entero_Mu_NC_000929: tail fiber; NCTC9097_03337; phage(gi9633540)6.96e-43Showinfo_outline
14complement(3091379..3091939)PHAGE_Entero_Mu_NC_000929: hypothetical protein; NCTC9097_03338; phage(gi9633539)1.39e-56Showinfo_outline
15complement(3091930..3093012)PHAGE_Entero_Mu_NC_000929: hypothetical protein; NCTC9097_03339; phage(gi9633538)3.37e-124Showinfo_outline
16complement(3093012..3093449)PHAGE_Entero_Mu_NC_000929: hypothetical protein; NCTC9097_03340; phage(gi9633537)2.88e-51Showinfo_outline
17complement(3093442..3094053)PHAGE_Entero_Mu_NC_000929: putative baseplate assembly protein; NCTC9097_03341; phage(gi9633536)2.73e-65Showinfo_outline
18complement(3094046..3095170)PHAGE_Entero_Mu_NC_000929: putative tail protein; NCTC9097_03342; phage(gi9633535)7.89e-119Showinfo_outline
19complement(3095154..3096512)PHAGE_Entero_Mu_NC_000929: putative DNA circulation protein; NCTC9097_03343; phage(gi9633534)1.19e-70Showinfo_outline
20complement(3096499..3098556)PHAGE_Entero_Mu_NC_000929: putative tape measure protein; NCTC9097_03344; phage(gi9633533)8.44e-107Showinfo_outline
21complement(3098684..3099160)PHAGE_Entero_Mu_NC_000929: hypothetical protein; NCTC9097_03345; phage(gi9633532)1.14e-30Showinfo_outline
22complement(3099175..3099540)PHAGE_Entero_Mu_NC_000929: hypothetical protein; NCTC9097_03346; phage(gi9633531)1.28e-32Showinfo_outline
23complement(3099549..3101051)PHAGE_Entero_Mu_NC_000929: major tail subunit; NCTC9097_03347; phage(gi9633530)1.23e-163Showinfo_outline
24complement(3101051..3101329)PHAGE_Entero_Mu_NC_000929: hypothetical protein; NCTC9097_03348; phage(gi9633529)7.68e-11Showinfo_outline
25complement(3101333..3101896)PHAGE_Entero_Mu_NC_000929: hypothetical protein; NCTC9097_03349; phage(gi9633528)1.37e-42Showinfo_outline
26complement(3101893..3102312)PHAGE_Entero_Mu_NC_000929: hypothetical protein; NCTC9097_03350; phage(gi9633527)7.86e-34Showinfo_outline
27complement(3102309..3102668)PHAGE_Entero_Mu_NC_000929: hypothetical protein; NCTC9097_03351; phage(gi9633526)2.01e-05Showinfo_outline
28complement(3102712..3103659)PHAGE_Entero_Mu_NC_000929: major head subunit; NCTC9097_03352; phage(gi9633525)5.68e-158Showinfo_outline
29complement(3103659..3104792)PHAGE_Entero_Mu_NC_000929: putative protease protein; NCTC9097_03353; phage(gi9633523)9.49e-110Showinfo_outline
30complement(3104970..3105443)PHAGE_Entero_Mu_NC_000929: putative virion morphogenesis protein; NCTC9097_03354; phage(gi9633522)4.39e-50Showinfo_outline
31complement(3105565..3106896)PHAGE_Entero_Mu_NC_000929: virion morphogenesis late F orf; NCTC9097_03355; phage(gi9633521)0.0Showinfo_outline
32complement(3106880..3108469)PHAGE_Entero_Mu_NC_000929: hypothetical protein; Portal; phage protein; NCTC9097_03356(gi9633520)0.0Showinfo_outline
33complement(3108469..3110133)PHAGE_Entero_Mu_NC_000929: putative portal protein; NCTC9097_03357; phage(gi9633519)0.0Showinfo_outline
34complement(3110133..3110381)Uncharacterised protein; NCTC9097_033580.0Showinfo_outline
35complement(3110392..3110973)PHAGE_Entero_Mu_NC_000929: hypothetical protein; NCTC9097_03359; phage(gi9633518)8.17e-66Showinfo_outline
36complement(3110976..3111266)PHAGE_Entero_Mu_NC_000929: hypothetical protein; NCTC9097_03360; phage(gi9633517)3.62e-35Showinfo_outline
37complement(3111259..3111570)PHAGE_Entero_Mu_NC_000929: hypothetical protein; NCTC9097_03361; phage(gi9633516)5.69e-12Showinfo_outline
38complement(3111551..3111778)PHAGE_Vibrio_12B12_NC_021070: C4-type zinc finger protein; NCTC9097_03362; phage(gi481019174)1.14e-07Showinfo_outline
39complement(3111991..3112341)PHAGE_Bacter_APSE_2_NC_011551: hypothetical protein; NCTC9097_03363; phage(gi212499718)4.50e-06Showinfo_outline
40complement(3112454..3112954)PHAGE_Xantho_CP1_NC_019933: hypothetical protein; NCTC9097_03364; phage(gi431811023)1.35e-33Showinfo_outline
41complement(3113026..3113448)PHAGE_Entero_Mu_NC_000929: putative transcription regulator; NCTC9097_03365; phage(gi9633511)1.06e-30Showinfo_outline
42complement(3113519..3114031)PHAGE_Entero_Mu_NC_000929: hypothetical protein; modulation; phage of host gene protein; NCTC9097_03366(gi9633506)2.45e-34Showinfo_outline
433114102..3114341Uncharacterised protein; NCTC9097_033670.0Showinfo_outline
44complement(3114322..3114609)PHAGE_Entero_Mu_NC_000929: hypothetical protein; NCTC9097_03368; phage(gi9633504)8.97e-24Showinfo_outline
45complement(3114611..3114754)PHAGE_Entero_Mu_NC_000929: hypothetical protein; NCTC9097_03369; phage(gi9633503)2.89e-20Showinfo_outline
46complement(3114747..3115079)Uncharacterised protein; NCTC9097_033700.0Showinfo_outline
47complement(3115076..3115624)PHAGE_Mycoba_Thibault_NC_023738: gp103; NCTC9097_03371; phage(gi593780263)7.54e-09Showinfo_outline
48complement(3115631..3115897)PHAGE_Entero_Mu_NC_000929: hypothetical protein; NCTC9097_03372; phage(gi9633502)4.29e-20Showinfo_outline
49complement(3117082..3117459)PHAGE_Entero_Mu_NC_000929: hypothetical protein; NCTC9097_03374; phage(gi9633502)1.80e-32Showinfo_outline
50complement(3117459..3117992)PHAGE_Entero_Mu_NC_000929: hypothetical protein; NCTC9097_03375; phage(gi9633501)3.07e-77Showinfo_outline
51complement(3118138..3118668)PHAGE_Entero_Mu_NC_000929: Gam; NCTC9097_03376; phage(gi9633500)1.11e-64Showinfo_outline
52complement(3118680..3118973)Uncharacterised protein; NCTC9097_033770.0Showinfo_outline
53complement(3118978..3119250)Uncharacterised protein; NCTC9097_033780.0Showinfo_outline
54complement(3119247..3119528)PHAGE_Burkho_BcepMigl_NC_019917: hypothetical protein; NCTC9097_03379; phage(gi431809888)3.48e-17Showinfo_outline
55complement(3119530..3119784)Uncharacterised protein; NCTC9097_033800.0Showinfo_outline
56complement(3119797..3120018)Uncharacterised protein; NCTC9097_033810.0Showinfo_outline
57complement(3120021..3120953)PHAGE_Entero_Mu_NC_000929: DNA transposition protein; NCTC9097_03382; phage(gi9633513)2.84e-91Showinfo_outline
58complement(3121025..3123115)PROPHAGE_Escher_Sakai: phage transposase; NCTC9097_03383; phage(gi15834199)0.0Showinfo_outline

Region 9, total 22 CDS

#CDS PositionBLAST HitE-ValueSequence
13178575..3178586attL0.0Showinfo_outline
2complement(3188846..3192937)PROPHAGE_Escher_CFT073: Pic serine protease precursor; NCTC9097_03451; phage(gi26246250)0.0Showinfo_outline
33193534..3193899PROPHAGE_Ralsto_GMI1000: ISRSO10-transposase ORFA protein; NCTC9097_03452; phage(gi17546153)3.61e-59Showinfo_outline
43195455..3196048PROPHAGE_Escher_CFT073: insertion element IS2 transposase InsD; NCTC9097_03454; phage(gi26249446)2.79e-139Showinfo_outline
5complement(3196067..3196282)PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; NCTC9097_03455; phage(gi557307573)7.96e-13Showinfo_outline
6complement(3196489..3196761)PHAGE_Entero_P1_NC_005856: InsA; NCTC9097_03456; phage(gi46401643)6.29e-24Showinfo_outline
7complement(3197582..3197827)PROPHAGE_Salmon_Ty2: transposase; NCTC9097_03458; phage(gi29143766)7.66e-51Showinfo_outline
8complement(3198516..3198713)PROPHAGE_Ralsto_GMI1000: ISRSO10-transposase ORFA protein; NCTC9097_03461; phage(gi17546153)8.22e-08Showinfo_outline
9complement(3199001..3199573)PROPHAGE_Escher_MG1655: IS150 transposase B; NCTC9097_03462; phage(gi16131429)4.10e-70Showinfo_outline
10complement(3199709..3200107)PROPHAGE_Ralsto_GMI1000: ISRSO11-transposase ORFA protein; NCTC9097_03463; phage(gi17546156)7.31e-13Showinfo_outline
113200173..3200577PHAGE_Stx2_c_1717_NC_011357: truncated transposase; NCTC9097_03464; phage(gi209447151)8.74e-39Showinfo_outline
123200574..3200837PHAGE_Stx2_c_1717_NC_011357: transposase; NCTC9097_03465; phage(gi209447152)1.41e-53Showinfo_outline
133200867..3201214PHAGE_Stx2_c_1717_NC_011357: transposase; NCTC9097_03466; phage(gi209447153)2.52e-66Showinfo_outline
14complement(3201487..3203847)PHAGE_Klebsi_Sugarland_NC_042093: putative virion structural protein; NCTC9097_03467; phage(gi100294)2.35e-26Showinfo_outline
15complement(3204002..3204565)Protein of uncharacterised function (DUF3296); NCTC9097_034680.0Showinfo_outline
163204764..3204901Uncharacterised protein; NCTC9097_034690.0Showinfo_outline
17complement(3205850..3207685)membrane protein; NCTC9097_034700.0Showinfo_outline
183207786..3208073PHAGE_Entero_P4_NC_001609: transcriptional regulator; NCTC9097_03471; phage(gi9627517)5.25e-05Showinfo_outline
193208045..3208572CP4-57 prophage protein; NCTC9097_034720.0Showinfo_outline
203210312..3210887Uncharacterised protein; NCTC9097_034740.0Showinfo_outline
213211016..3211027attR0.0Showinfo_outline
22complement(3211057..3212274)PROPHAGE_Escher_EDL933: P4 family integrase; NCTC9097_03475; phage(gi15801047)0.0Showinfo_outline

Region 10, total 32 CDS

#CDS PositionBLAST HitE-ValueSequence
13385274..3385285attL0.0Showinfo_outline
2complement(3397380..3398222)PHAGE_Pseudo_phiPSA1_NC_024365: DNA restriction methylase; NCTC9097_03640; phage(gi658307732)6.47e-12Showinfo_outline
3complement(3398307..3398504)Aec78; NCTC9097_036410.0Showinfo_outline
4complement(3398516..3399007)aec77; NCTC9097_036420.0Showinfo_outline
5complement(3399004..3399378)toxin of the YeeV-YeeU toxin-antitoxin system; NCTC9097_036430.0Showinfo_outline
6complement(3399469..3399822)antitoxin of the YeeV-YeeU toxin-antitoxin system; CP4-44 prophage; NCTC9097_036440.0Showinfo_outline
7complement(3399898..3400119)PHAGE_Klebsi_vB_KpnP_KpV71_NC_031246: hypothetical protein; NCTC9097_03645; phage(gi100007)3.04e-15Showinfo_outline
8complement(3400182..3400658)putative DNA repair protein; NCTC9097_036460.0Showinfo_outline
9complement(3400674..3401147)PHAGE_Pseudo_YuA_NC_010116: hypothetical protein; NCTC9097_03647; phage(gi162135127)2.51e-16Showinfo_outline
10complement(3401241..3401486)antirestriction protein; NCTC9097_036480.0Showinfo_outline
11complement(3401486..3402307)PHAGE_Cronob_vB_CsaM_GAP32_NC_019401: hypothetical protein; NCTC9097_03649; phage(gi414086954)9.31e-57Showinfo_outline
12complement(3402408..3402980)PHAGE_Yersin_fHe_Yen9_04_NC_042116: hypothetical protein; NCTC9097_03650; phage(gi100019)1.88e-48Showinfo_outline
13complement(3403201..3403611)PHAGE_Salmon_SPN3US_NC_027402: hypothetical protein; NCTC9097_03651; phage(gi849122716)1.73e-13Showinfo_outline
14complement(3403627..3404310)Uncharacterised protein; NCTC9097_036520.0Showinfo_outline
15complement(3404444..3407203)CP4-44 prophage; antigen 43 (Ag43)phase-variable biofilm formation autotransporter; NCTC9097_036530.0Showinfo_outline
16complement(3407531..3408403)putative GTP-binding protein; NCTC9097_036550.0Showinfo_outline
173408734..3408892Uncharacterised protein; NCTC9097_036560.0Showinfo_outline
18complement(3409129..3409218)PHAGE_Stx2_c_1717_NC_011357: transposase; NCTC9097_03657; phage(gi209447152)2.27e-07Showinfo_outline
19complement(3409215..3409640)PHAGE_Stx2_c_1717_NC_011357: truncated transposase; NCTC9097_03658; phage(gi209447151)3.71e-10Showinfo_outline
20complement(3409798..3411051)PHAGE_Entero_phi92_NC_023693: Phi92_gp173; NCTC9097_03659; phage(gi726647107)3.88e-21Showinfo_outline
21complement(3411109..3412722)PHAGE_Stx2_c_1717_NC_011357: transposase; NCTC9097_03660; phage(gi209447153)0.0Showinfo_outline
22complement(3412753..3413103)PHAGE_Stx2_c_1717_NC_011357: transposase; NCTC9097_03661; phage(gi209447152)3.45e-51Showinfo_outline
23complement(3413100..3413525)PHAGE_Stx2_c_1717_NC_011357: truncated transposase; NCTC9097_03662; phage(gi209447151)1.29e-15Showinfo_outline
243413676..3413849transposase Orf1 of IS683; NCTC9097_036630.0Showinfo_outline
253413830..3414342PHAGE_Stx2_c_1717_NC_011357: truncated transposase; NCTC9097_03664; phage(gi209447151)1.79e-10Showinfo_outline
263414704..3415054PHAGE_Stx2_c_1717_NC_011357: transposase; NCTC9097_03665; phage(gi209447153)2.22e-06Showinfo_outline
273415345..3416307PHAGE_Stx2_c_1717_NC_011357: transposase; NCTC9097_03666; phage(gi209447153)1.30e-142Showinfo_outline
283416214..3416225attR0.0Showinfo_outline
293416371..3417333PROPHAGE_Escher_CFT073: prophage P4 integrase; NCTC9097_03667; phage(gi26248270)0.0Showinfo_outline
30complement(3417527..3418831)putative chorismate binding protein; NCTC9097_036680.0Showinfo_outline
31complement(3418859..3420139)yersiniabactin-iron transporter permease YbtX; NCTC9097_036690.0Showinfo_outline
32complement(3420132..3421934)PHAGE_Bacill_SPbeta_NC_001884: ABC transporter; NCTC9097_03670; phage(gi9630145)9.03e-16Showinfo_outline

Region 11, total 64 CDS

#CDS PositionBLAST HitE-ValueSequence
14091732..4091743attL0.0Showinfo_outline
2complement(4100743..4101060)PHAGE_Entero_mEp390_NC_019721: hypothetical protein; NCTC9097_04300; phage(gi428782690)4.72e-37Showinfo_outline
3complement(4101060..4101299)PHAGE_Entero_HK225_NC_019717: hypothetical protein; NCTC9097_04301; phage(gi428782404)1.69e-41Showinfo_outline
4complement(4101452..4102564)Uncharacterised protein; NCTC9097_043020.0Showinfo_outline
5complement(4102631..4102819)Uncharacterised protein; NCTC9097_043030.0Showinfo_outline
6complement(4102819..4104108)PHAGE_Edward_GF_2_NC_026611: putative tail fiber protein; NCTC9097_04304; phage(gi764162278)7.68e-54Showinfo_outline
7complement(4104111..4104752)PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC9097_04305; phage(gi764162277)6.87e-113Showinfo_outline
8complement(4104749..4105978)PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC9097_04306; phage(gi764162276)0.0Showinfo_outline
9complement(4105975..4106334)PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC9097_04307; phage(gi764162275)1.77e-58Showinfo_outline
10complement(4106331..4107041)PHAGE_Edward_GF_2_NC_026611: putative baseplate protein; NCTC9097_04308; phage(gi764162274)5.48e-108Showinfo_outline
11complement(4107034..4107765)PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC9097_04309; phage(gi764162273)6.83e-58Showinfo_outline
12complement(4108996..4109457)PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC9097_04311; phage(gi764162258)2.84e-39Showinfo_outline
13complement(4109535..4109924)PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC9097_04312; phage(gi764162257)2.51e-53Showinfo_outline
14complement(4109927..4110247)PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC9097_04313; phage(gi764162256)1.82e-40Showinfo_outline
15complement(4110247..4111278)PHAGE_Edward_GF_2_NC_026611: putative capsid protein; NCTC9097_04314; phage(gi764162255)0.0Showinfo_outline
16complement(4111278..4111766)PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC9097_04315; phage(gi764162254)1.10e-81Showinfo_outline
17complement(4111778..4113022)PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC9097_04316; phage(gi764162253)0.0Showinfo_outline
18complement(4113085..4113852)PHAGE_Edward_GF_2_NC_026611: putative head protein; NCTC9097_04317; phage(gi764162251)1.20e-139Showinfo_outline
19complement(4113812..4115302)PHAGE_Edward_GF_2_NC_026611: putative portal protein; NCTC9097_04318; phage(gi764162250)0.0Showinfo_outline
20complement(4115307..4116680)PHAGE_Edward_GF_2_NC_026611: putative terminase large subunit; NCTC9097_04319; phage(gi764162249)0.0Showinfo_outline
21complement(4116655..4117254)PHAGE_Edward_GF_2_NC_026611: putative terminase small subunit; NCTC9097_04320; phage(gi764162248)6.53e-119Showinfo_outline
22complement(4117265..4117468)PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC9097_04321; phage(gi764162329)2.00e-10Showinfo_outline
23complement(4117478..4117732)PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC9097_04322; phage(gi764162328)7.52e-29Showinfo_outline
244117836..4117940Uncharacterised protein; NCTC9097_043230.0Showinfo_outline
25complement(4117933..4118355)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC9097_04324; phage(gi431810528)9.18e-25Showinfo_outline
26complement(4118355..4118927)PHAGE_Salmon_SEN22_NC_028696: lysin; NCTC9097_04325; phage(gi966201366)2.80e-82Showinfo_outline
27complement(4118929..4119216)PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; NCTC9097_04326; phage(gi423262443)6.92e-15Showinfo_outline
28complement(4119401..4119475)tRNA0.0Showinfo_outline
29complement(4119570..4120214)PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; NCTC9097_04328; phage(gi23505493)9.32e-47Showinfo_outline
30complement(4120336..4120917)PHAGE_Entero_YYZ_2008_NC_011356: putative recombination endonuclease; NCTC9097_04329; phage(gi209427761)6.67e-53Showinfo_outline
31complement(4120910..4121359)PHAGE_Stx2_c_1717_NC_011357: NinB protein; NCTC9097_04330; phage(gi209447158)5.24e-46Showinfo_outline
32complement(4121551..4121805)Uncharacterised protein; NCTC9097_043310.0Showinfo_outline
33complement(4121991..4122272)PHAGE_Escher_phiV10_NC_007804: hypothetical protein; NCTC9097_04332; phage(gi89152468)1.11e-49Showinfo_outline
34complement(4122274..4122882)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC9097_04333; phage(gi431810512)1.78e-24Showinfo_outline
35complement(4122879..4123184)PHAGE_Caulob_karma_NC_019410: hypothetical protein; NCTC9097_04334; phage(gi414089390)2.12e-09Showinfo_outline
36complement(4123187..4123570)Uncharacterised protein; NCTC9097_043350.0Showinfo_outline
37complement(4123567..4123761)Uncharacterised protein; NCTC9097_043360.0Showinfo_outline
38complement(4123754..4123972)Uncharacterised protein; NCTC9097_043370.0Showinfo_outline
39complement(4123969..4124373)PHAGE_Escher_ECBP5_NC_027330: hypothetical protein; NCTC9097_04338; phage(gi849119768)1.87e-10Showinfo_outline
40complement(4124370..4124675)PHAGE_Escher_PA28_NC_041935: replication and recombination DNA helicase; NCTC9097_04339; phage(gi100033)4.48e-15Showinfo_outline
41complement(4124677..4125363)PHAGE_Escher_HK639_NC_016158: replication protein 14; NCTC9097_04340; phage(gi356870655)1.81e-106Showinfo_outline
42complement(4125360..4126331)PHAGE_Edward_GF_2_NC_026611: putative DNA replication protein O; NCTC9097_04341; phage(gi764162309)5.05e-41Showinfo_outline
43complement(4126391..4127209)PHAGE_Salmon_64795_sal3_NC_031918: membrane-associated initiation of head vertex; NCTC9097_04342; phage(gi100034)3.51e-64Showinfo_outline
44complement(4127242..4127541)PHAGE_Entero_HK633_NC_019719: CII protein; NCTC9097_04343; phage(gi428782569)5.62e-37Showinfo_outline
45complement(4127582..4127833)PHAGE_Escher_HK639_NC_016158: cro; NCTC9097_04344; phage(gi356870651)4.99e-22Showinfo_outline
464127961..4128653PHAGE_Escher_HK639_NC_016158: cI; NCTC9097_04345; phage(gi356870650)8.80e-79Showinfo_outline
474129411..4129629Uncharacterised protein; NCTC9097_043460.0Showinfo_outline
484129766..4129924PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC9097_04347; phage(gi356870642)1.14e-30Showinfo_outline
494129921..4130091PHAGE_Entero_mEp235_NC_019708: Kil protein; NCTC9097_04348; phage(gi428781845)8.05e-13Showinfo_outline
504130078..4130524Uncharacterised protein; NCTC9097_043490.0Showinfo_outline
514130594..4131793PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC9097_04350; phage(gi764162300)1.03e-46Showinfo_outline
524131801..4132085PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC9097_04351; phage(gi356870640)1.74e-39Showinfo_outline
534132104..4132850PHAGE_Salmon_SEN34_NC_028699: recombinational DNA repair protein RecT (prophage associated); NCTC9097_04352; phage(gi966201455)1.24e-85Showinfo_outline
544132850..4133470PHAGE_Paraco_Shpa_NC_041868: RegA; NCTC9097_04353; phage(gi100039)6.97e-73Showinfo_outline
554133467..4133895PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC9097_04354; phage(gi356870637)3.48e-72Showinfo_outline
564133892..4134056PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC9097_04355; phage(gi356870636)1.53e-19Showinfo_outline
574134053..4134610PHAGE_Erwini_phiEt88_NC_015295: DNA N-6-adenine-methyltransferase; NCTC9097_04356; phage(gi327198618)1.52e-75Showinfo_outline
584134607..4134828Uncharacterised protein; NCTC9097_043570.0Showinfo_outline
594134825..4135691Uncharacterised protein; NCTC9097_043580.0Showinfo_outline
604135688..4135909PHAGE_Entero_SfI_NC_027339: hypothetical protein; NCTC9097_04359; phage(gi849250254)3.52e-23Showinfo_outline
614135911..4136150PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC9097_04360; phage(gi356870632)1.11e-29Showinfo_outline
624136266..4136613PHAGE_Entero_HK446_NC_019714: excisionase; NCTC9097_04361; phage(gi428782219)8.43e-48Showinfo_outline
634136323..4136334attR0.0Showinfo_outline
644136640..4137653PHAGE_Entero_SfI_NC_027339: phage integrase family site-specific recombinase; NCTC9097_04362; phage(gi849250251)5.97e-164Showinfo_outline
Click on a region to see details.
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)

Viewer Options
Length: 5230290 bps
Phages: 11
arrow_upwardarrow_upwardarrow_upward
Click on a region in the genome above to show details here.
Viewer Options
Click on a sequence to see details.
Viewer Options
Click on a sequence to see details.
Viewer Options
Click on a sequence to see details.
Viewer Options
Click on a sequence to see details.
Viewer Options
Click on a sequence to see details.
Viewer Options
Click on a sequence to see details.
Viewer Options
Click on a sequence to see details.
Viewer Options
Click on a sequence to see details.
Viewer Options
Click on a sequence to see details.
Viewer Options
Click on a sequence to see details.
Viewer Options
Click on a sequence to see details.
Lysis
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Fiber Protein
Plate Protein
tRNA

Download data as .txt file: png_input file_download