Submission Results

Sequence Name: Not Available

GenBank Accession Number: UGEO01000001.1

GenInfo (GI) Number: 0000000000

Download Results: UGEO01000001.1.PHASTER.zip

gi|00000000|ref|UGEO01000001.1| Escherichia coli strain NCTC9103 genome assembly, contig: 4774029, gc%: 50.78%

Download summary as .txt file: summary.txt file_download

Total: 4 prophage regions have been identified, of which 2 regions are intact, 2 regions are incomplete, and 0 regions are questionable.

RegionRegion LengthCompletenessScore# Total ProteinsRegion PositionMost Common PhageGC %Details
136.1Kbintact150471719608-1755794 info_outlinePHAGE_Entero_P2_NC_001895(29)50.18%Show info_outline
214.6Kbincomplete30142309193-2323853 info_outlinePHAGE_Entero_phiP27_NC_003356(3)46.77%Show info_outline
337.8Kbincomplete50382323673-2361529 info_outlinePHAGE_Entero_DE3_NC_042057(21)51.48%Show info_outline
439.5Kbintact150493062658-3102164 info_outlinePHAGE_Salmon_Fels_2_NC_010463(36)50.18%Show info_outline
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Region: The number assigned to the region.
Region Length: The length of the sequence of that region (in bp).
Completeness: A prediction of whether the region contains a intact or incomplete prophage based on the above criteria.
Score: The score of the region based on the above criteria.
# Total Proteins: The number of ORFs present in the region.
Region Position: The start and end positions of the region on the bacterial chromosome.
Most Common Phage: The phage(s) with the highest number of proteins most similar to those in the region.
GC %: The percentage of GC nucleotides of the region.

Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:

  1. If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
Method 2:
  1. If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
Method 3:
  1. If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
  2. If the size of the region is greater than 30 Kb, the score will be increased by 10.
  3. If there are at least 40 proteins in the region, the score will be increased by 10.
  4. If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
Compared the total score of method 2 with the total score of method 3, the bigger one is chosen as the total score of the region.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.

gi|00000000|ref|UGEO01000001.1| Escherichia coli strain NCTC9103 genome assembly, contig: 4774029, gc%: 50.78%

Download details as .txt file: detail.txt file_download

Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File

Region 1, total 49 CDS

#CDS PositionBLAST HitE-ValueSequence
11719608..1720648PHAGE_Prochl_P_TIM68_NC_028955: putative zinc-containing alcohol dehydrogenase superfamily protein; NCTC9103_01650; phage(gi971760362)3.17e-13Showinfo_outline
21720748..1721527PHAGE_Escher_RCS47_NC_042128: DNA helicase; NCTC9103_01651; phage(gi100021)5.39e-22Showinfo_outline
3complement(1721609..1722508)lipid kinase; NCTC9103_016520.0Showinfo_outline
41722863..1723240protein; NCTC9103_016530.0Showinfo_outline
51723398..1723425attL0.0Showinfo_outline
6complement(1723505..1724518)PHAGE_Entero_P2_NC_001895: integrase; NCTC9103_01654; phage(gi9630357)0.0Showinfo_outline
7complement(1724634..1724933)PHAGE_Entero_P2_NC_001895: gpC; NCTC9103_01655; phage(gi9630358)6.96e-69Showinfo_outline
81725048..1725323PHAGE_Entero_P2_NC_001895: Cox; NCTC9103_01656; phage(gi9630359)1.19e-61Showinfo_outline
91725334..1725504PHAGE_Entero_P2_NC_001895: hypothetical protein; NCTC9103_01657; phage(gi9630360)1.98e-34Showinfo_outline
101725501..1726001PHAGE_Entero_WPhi_NC_005056: gpB; NCTC9103_01658; phage(gi33438931)1.23e-121Showinfo_outline
111726065..1726289PHAGE_Escher_P2_NC_041848: hypothetical protein; NCTC9103_01659; phage(gi100006)7.05e-48Showinfo_outline
121726289..1726588PHAGE_Yersin_L_413C_NC_004745: hypothetical protein; NCTC9103_01660; phage(gi30065739)5.92e-64Showinfo_outline
131726591..1726815PHAGE_Entero_P2_NC_001895: DksA-like zinc finger domain containing protein; NCTC9103_01661; phage(gi9630364)1.17e-48Showinfo_outline
141726812..1727087PHAGE_Entero_P2_NC_001895: hypothetical protein; NCTC9103_01662; phage(gi9630365)9.15e-62Showinfo_outline
151727077..1729362PHAGE_Entero_P2_NC_001895: gpA; NCTC9103_01663; phage(gi9630366)0.0Showinfo_outline
161729362..1729529Uncharacterised protein; NCTC9103_016640.0Showinfo_outline
171729516..1731354Uncharacterised protein; NCTC9103_016650.0Showinfo_outline
181731668..1731937Uncharacterised protein; NCTC9103_016660.0Showinfo_outline
191731930..1732400Uncharacterised protein; NCTC9103_016670.0Showinfo_outline
20complement(1732477..1733496)PHAGE_Entero_P2_NC_001895: portal vertex protein; NCTC9103_01668; phage(gi9630328)0.0Showinfo_outline
21complement(1733496..1735268)PHAGE_Entero_WPhi_NC_005056: gpP; NCTC9103_01669; phage(gi33438899)0.0Showinfo_outline
221735442..1736296PHAGE_Entero_P2_NC_001895: capsid-scaffolding protein; NCTC9103_01670; phage(gi9630330)0.0Showinfo_outline
231736355..1737428PHAGE_Entero_P2_NC_001895: capsid protein; NCTC9103_01671; phage(gi9630331)0.0Showinfo_outline
241737432..1738175PHAGE_Entero_P2_NC_001895: terminase endonuclease subunit; NCTC9103_01672; phage(gi9630332)2.62e-176Showinfo_outline
251738275..1738784PHAGE_Entero_P2_NC_001895: gpL; NCTC9103_01673; phage(gi9630333)8.35e-120Showinfo_outline
261738784..1738987PHAGE_Entero_P2_NC_001895: gpX; NCTC9103_01674; phage(gi9630334)1.13e-41Showinfo_outline
271738991..1739272PHAGE_Entero_P2_NC_001895: gpY; NCTC9103_01675; phage(gi9630335)5.16e-57Showinfo_outline
281739272..1739769PHAGE_Entero_P2_NC_001895: gpK; NCTC9103_01676; phage(gi9630336)1.92e-120Showinfo_outline
291739784..1740209PHAGE_Escher_pro147_NC_028896: holin; NCTC9103_01677; phage(gi971753738)3.26e-82Showinfo_outline
301740197..1740622PHAGE_Entero_P2_NC_001895: LysB; NCTC9103_01678; phage(gi9630338)2.75e-85Showinfo_outline
311740609..1740767PHAGE_Entero_P2_NC_001895: LysC; NCTC9103_01679; phage(gi26454698)1.71e-30Showinfo_outline
321740730..1741197PHAGE_Entero_fiAA91_ss_NC_022750: tail completion protein; NCTC9103_01680; phage(gi557307596)5.15e-107Showinfo_outline
331741190..1741648PHAGE_Entero_P2_NC_001895: gpS; NCTC9103_01681; phage(gi9630340)9.11e-54Showinfo_outline
341741645..1742400Uncharacterised protein; NCTC9103_016820.0Showinfo_outline
351742442..1743113PHAGE_Entero_P2_NC_001895: gpV; NCTC9103_01683; phage(gi9630342)2.46e-149Showinfo_outline
361743110..1743457PHAGE_Entero_P2_NC_001895: baseplate wedge subunit; NCTC9103_01684; phage(gi9630343)8.69e-80Showinfo_outline
371743462..1744370PHAGE_Escher_pro147_NC_028896: baseplate assembly protein J; NCTC9103_01685; phage(gi971753731)0.0Showinfo_outline
381744363..1744893PHAGE_Entero_P2_NC_001895: gpI; NCTC9103_01686; phage(gi9630345)2.57e-125Showinfo_outline
391744904..1747033PHAGE_Entero_fiAA91_ss_NC_022750: tail fiber; NCTC9103_01687; phage(gi557307600)0.0Showinfo_outline
401747037..1747564PHAGE_Entero_P2_NC_001895: gpG; NCTC9103_01688; phage(gi9630347)5.69e-94Showinfo_outline
41complement(1747728..1748768)Uncharacterised protein; NCTC9103_016890.0Showinfo_outline
421749091..1750281PHAGE_Entero_P2_NC_001895: major tail sheath protein; NCTC9103_01690; phage(gi9630349)0.0Showinfo_outline
431750294..1750812PHAGE_Entero_P2_NC_001895: major tail tube protein; NCTC9103_01691; phage(gi9630350)1.05e-124Showinfo_outline
441750869..1751144PHAGE_Entero_P2_NC_001895: gpE; NCTC9103_01692; phage(gi9630351)1.24e-57Showinfo_outline
451751289..1753736PHAGE_Entero_P2_NC_001895: gpT; NCTC9103_01693; phage(gi9630353)0.0Showinfo_outline
461753751..1754230PHAGE_Entero_P2_NC_001895: gpU; NCTC9103_01694; phage(gi9630354)1.74e-111Showinfo_outline
471754230..1755393PHAGE_Entero_P2_NC_001895: tail protein; NCTC9103_01695; phage(gi9630355)0.0Showinfo_outline
481755475..1755693PHAGE_Entero_P2_NC_001895: Ogr; NCTC9103_01696; phage(gi9630356)2.18e-49Showinfo_outline
491755794..1755821attR0.0Showinfo_outline

Region 2, total 16 CDS

#CDS PositionBLAST HitE-ValueSequence
12309193..2310212PHAGE_Synech_S_SM2_NC_015279: zinc-containing alcohol dehydrogenase superfamily protein; NCTC9103_02260; phage(gi326781942)2.00e-18Showinfo_outline
22310173..2310185attL0.0Showinfo_outline
32310270..2310398protein, truncated; NCTC9103_022610.0Showinfo_outline
4complement(2310400..2311680)PHAGE_Entero_phiP27_NC_003356: putative integrase; Qin; phage prophage; NCTC9103_02262(gi18249865)0.0Showinfo_outline
5complement(2311715..2311951)PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage excisionase; NCTC9103_02263; phage(gi169257269)1.10e-20Showinfo_outline
6complement(2312039..2314510)PHAGE_Salmon_118970_sal3_NC_031940: baseplate hub subunit; NCTC9103_02264; phage(gi100107)2.51e-69Showinfo_outline
7complement(2314604..2314795)putative prophage protein; NCTC9103_022650.0Showinfo_outline
8complement(2314792..2314980)division inhibition protein; NCTC9103_022660.0Showinfo_outline
9complement(2315467..2316042)putative prophage protein; NCTC9103_022680.0Showinfo_outline
10complement(2316044..2316280)PHAGE_Salico_CGphi29_NC_020844: hypothetical protein; NCTC9103_02269; phage(gi472340166)4.37e-11Showinfo_outline
11complement(2316492..2316830)PHAGE_Entero_phiP27_NC_003356: putative lambda repressor; NCTC9103_02270; phage(gi18249875)8.43e-10Showinfo_outline
122317222..2317464PHAGE_Pectob_ZF40_NC_019522: putative cro anti-repressor; NCTC9103_02271; phage(gi422936651)4.22e-11Showinfo_outline
132317448..2317780PHAGE_Entero_mEp237_NC_019704: CII protein; NCTC9103_02272; phage(gi435439306)1.72e-06Showinfo_outline
142317944..2319014PHAGE_Entero_phiP27_NC_003356: hypothetical protein; NCTC9103_02273; phage(gi18249881)7.20e-32Showinfo_outline
152319052..2319468PHAGE_Shigel_Stx_NC_029120: LygF; NCTC9103_02274; phage(gi985761265)7.98e-55Showinfo_outline
162323853..2323865attR0.0Showinfo_outline

Region 3, total 38 CDS

#CDS PositionBLAST HitE-ValueSequence
12323673..2324722PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC9103_02277; phage(gi428782365)6.30e-141Showinfo_outline
22324736..2325488PHAGE_Entero_SfV_NC_003444: antitermination protein Q; NCTC9103_02278; phage(gi19549033)1.56e-178Showinfo_outline
3complement(2325910..2326122)cold shock-like protein CspF; NCTC9103_022790.0Showinfo_outline
42327401..2327607PHAGE_Entero_mEp460_NC_019716: porin; NCTC9103_02281; phage(gi428782370)2.64e-40Showinfo_outline
52327612..2327923PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC9103_02282; phage(gi428782371)5.32e-40Showinfo_outline
62327920..2328453PHAGE_Entero_mEp460_NC_019716: endolysin; NCTC9103_02283; phage(gi428782372)1.35e-121Showinfo_outline
72328450..2328947PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; NCTC9103_02284; phage(gi16765210)2.07e-61Showinfo_outline
82330197..2330370GnsA/GnsB family transcriptional regulator; NCTC9103_022860.0Showinfo_outline
9complement(2330522..2330932)PHAGE_Entero_DE3_NC_042057: replication and recombination DNA helicase; NCTC9103_02287; phage(gi100033)1.04e-75Showinfo_outline
102331612..2332157PHAGE_Entero_DE3_NC_042057: RecA-like recombination protein; NCTC9103_02288; phage(gi100035)1.13e-129Showinfo_outline
112332132..2334057PHAGE_Entero_DE3_NC_042057: DNA polymerase; NCTC9103_02289; phage(gi100036)0.0Showinfo_outline
122334054..2334260PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9103_02290; phage(gi100037)2.25e-42Showinfo_outline
132334257..2335858PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9103_02291; phage(gi100038)0.0Showinfo_outline
142335839..2337158PHAGE_Entero_DE3_NC_042057: RegA; NCTC9103_02292; phage(gi100039)0.0Showinfo_outline
152337168..2337500PHAGE_Entero_DE3_NC_042057: clamp-loader subunit; NCTC9103_02293; phage(gi100040)2.64e-73Showinfo_outline
162337556..2338581PHAGE_Entero_DE3_NC_042057: clamp-loader subunit; NCTC9103_02294; phage(gi100041)0.0Showinfo_outline
172338623..2339018PHAGE_Entero_DE3_NC_042057: sliding clamp DNA polymerase; NCTC9103_02295; phage(gi100042)7.39e-72Showinfo_outline
182339030..2339383PHAGE_Entero_DE3_NC_042057: RNA polymerase binding protein; NCTC9103_02296; phage(gi100043)3.48e-79Showinfo_outline
192339395..2339973PHAGE_Entero_DE3_NC_042057: ssDNA binding protein; NCTC9103_02297; phage(gi100044)9.55e-132Showinfo_outline
202339970..2340365PHAGE_Entero_DE3_NC_042057: loader of DNA helicase; NCTC9103_02298; phage(gi100045)6.43e-91Showinfo_outline
212340373..2341113PHAGE_Entero_DE3_NC_042057: late promoter transcription; NCTC9103_02299; phage(gi100046)2.01e-176Showinfo_outline
222341129..2341551PHAGE_Entero_DE3_NC_042057: dsDNA binding protein; NCTC9103_02300; phage(gi100047)2.34e-101Showinfo_outline
232341533..2341967PHAGE_Entero_DE3_NC_042057: rnaseH; NCTC9103_02301; phage(gi100048)5.68e-101Showinfo_outline
242341960..2344521PHAGE_Entero_DE3_NC_042057: RNA polymerase sigma factor; NCTC9103_02302; phage(gi100049)0.0Showinfo_outline
252344518..2344847PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9103_02303; phage(gi100050)3.85e-75Showinfo_outline
262344847..2345545PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9103_02304; phage(gi100051)7.09e-171Showinfo_outline
272345694..2346293PHAGE_Entero_DE3_NC_042057: recombination endonuclease subunit; NCTC9103_02305; phage(gi100052)2.55e-142Showinfo_outline
282346290..2346862PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC9103_02306; phage(gi100053)1.03e-128Showinfo_outline
292346923..2350402PHAGE_Entero_DE3_NC_042057: recombination endonuclease subunit; NCTC9103_02307; phage(gi100054)0.0Showinfo_outline
302350470..2351069PHAGE_Entero_cdtI_NC_009514: putative Lom-like outer membrane protein; NCTC9103_02308; phage(gi148609401)1.28e-134Showinfo_outline
312351134..2354160PROPHAGE_Escher_MG1655: Qin prophage; predicted side tail fibre assembly protein; NCTC9103_02309; phage(gi16129506)4.80e-179Showinfo_outline
32complement(2354833..2355423)PHAGE_Entero_Mu_NC_000929: Gin; NCTC9103_02311; phage(gi9633542)3.18e-29Showinfo_outline
33complement(2355740..2355973)PHAGE_Salmon_118970_sal3_NC_031940: replication and recombination DNA helicase; NCTC9103_02312; phage(gi100033)1.44e-44Showinfo_outline
342356759..2358042PHAGE_Burkho_phi1026b_NC_005284: gp59; NCTC9103_02313; phage(gi38707949)7.81e-28Showinfo_outline
352358131..2359591putative sugar dehydrogenase; NCTC9103_023140.0Showinfo_outline
36complement(2359627..2359830)PHAGE_Salmon_SSU5_NC_018843: putative selenium-binding protein YdfZ; NCTC9103_02315; phage(gi410491512)4.86e-18Showinfo_outline
37complement(2360008..2360694)GntR family transcriptional regulator; NCTC9103_023160.0Showinfo_outline
38complement(2360783..2361529)PHAGE_Prochl_P_TIM68_NC_028955: hypothetical protein; NCTC9103_02317; phage(gi971760361)8.52e-10Showinfo_outline

Region 4, total 51 CDS

#CDS PositionBLAST HitE-ValueSequence
13062658..3062670attL0.0Showinfo_outline
2complement(3066924..3067142)PHAGE_Salmon_Fels_2_NC_010463: P2 gpOgr-like protein (acttivation of late gene expression); NCTC9103_02988; phage(gi169936018)1.22e-27Showinfo_outline
3complement(3067233..3068333)PHAGE_Salmon_Fels_2_NC_010463: tail protein; NCTC9103_02989; phage(gi169936019)0.0Showinfo_outline
4complement(3068330..3068815)PHAGE_Salmon_Fels_2_NC_010463: P2 gpU-like tail protein; NCTC9103_02990; phage(gi169936020)1.34e-98Showinfo_outline
5complement(3068812..3071889)PHAGE_Salmon_Fels_2_NC_010463: P2 gpT-like tail protein; NCTC9103_02991; phage(gi169936021)0.0Showinfo_outline
6complement(3072016..3072318)PHAGE_Salmon_Fels_2_NC_010463: P2 gpE-like tail protein; NCTC9103_02992; phage(gi169936023)1.74e-58Showinfo_outline
7complement(3072373..3072888)PHAGE_Salmon_Fels_2_NC_010463: major tail tube protein; NCTC9103_02993; phage(gi169936024)9.45e-118Showinfo_outline
8complement(3072898..3074070)PHAGE_Salmon_Fels_2_NC_010463: major tail sheath protein; NCTC9103_02994; phage(gi169936025)0.0Showinfo_outline
9complement(3074213..3074779)PHAGE_Salmon_Fels_2_NC_010463: DNA-invertase; e14; phage prophage; NCTC9103_02995(gi169936026)2.46e-115Showinfo_outline
103074810..3075301PHAGE_Erwini_ENT90_NC_019932: phage tail collar domain protein; NCTC9103_02996; phage(gi431810938)1.80e-09Showinfo_outline
113075304..3075747PHAGE_Escher_pro483_NC_028943: tail fiber assembly protein; NCTC9103_02997; phage(gi971758532)1.41e-46Showinfo_outline
12complement(3075719..3076204)PHAGE_Escher_pro483_NC_028943: putative tail fiber assembly protein; NCTC9103_02998; phage(gi971758533)7.95e-106Showinfo_outline
13complement(3076215..3076322)Uncharacterised protein; NCTC9103_029990.0Showinfo_outline
14complement(3076458..3077882)PHAGE_Salmon_Fels_2_NC_010463: P2 gpH-like protein; NCTC9103_03000; phage(gi169936030)1.15e-143Showinfo_outline
15complement(3077879..3078484)PHAGE_Salmon_Fels_2_NC_010463: P2 gpI-like baseplate assembly protein; NCTC9103_03001; phage(gi169936031)7.64e-138Showinfo_outline
16complement(3078477..3079385)PHAGE_Salmon_Fels_2_NC_010463: baseplate assembly protein; NCTC9103_03002; phage(gi169936032)0.0Showinfo_outline
17complement(3079372..3079731)PHAGE_Salmon_Fels_2_NC_010463: baseplate wedge subunit; NCTC9103_03003; phage(gi169936033)1.42e-67Showinfo_outline
18complement(3079728..3080306)PHAGE_Salmon_Fels_2_NC_010463: P2 gpV-like protein; NCTC9103_03004; phage(gi169936034)2.62e-119Showinfo_outline
19complement(3080375..3080821)PHAGE_Salmon_Fels_2_NC_010463: P2 gpS-like tail completion protein; NCTC9103_03005; phage(gi169936035)7.78e-95Showinfo_outline
20complement(3080814..3081245)PHAGE_Salmon_Fels_2_NC_010463: P2 gpR-like tail completion protein; NCTC9103_03006; phage(gi169936036)3.65e-94Showinfo_outline
21complement(3081341..3081769)PHAGE_Salmon_Fels_2_NC_010463: P2 LysB-like protein; NCTC9103_03007; phage(gi169936038)2.55e-64Showinfo_outline
22complement(3081766..3082143)membrane protein; NCTC9103_030080.0Showinfo_outline
23complement(3082145..3082657)PHAGE_Salmon_Fels_2_NC_010463: endolysin; NCTC9103_03009; phage(gi169936041)5.24e-104Showinfo_outline
24complement(3082638..3082853)PHAGE_Salmon_Fels_2_NC_010463: lysis protein; NCTC9103_03010; phage(gi169936042)1.13e-37Showinfo_outline
25complement(3082857..3083060)PHAGE_Salmon_Fels_2_NC_010463: P2 gpX-like tail protein; NCTC9103_03011; phage(gi169936043)8.30e-41Showinfo_outline
26complement(3083060..3083524)PHAGE_Salmon_Fels_2_NC_010463: P2 gpL-like protein; NCTC9103_03012; phage(gi169936044)2.78e-101Showinfo_outline
27complement(3083620..3084270)PHAGE_Salmon_Fels_2_NC_010463: terminase endonuclease subunit; NCTC9103_03013; phage(gi169936045)1.46e-125Showinfo_outline
28complement(3084274..3085332)PHAGE_Salmon_Fels_2_NC_010463: capsid protein; NCTC9103_03014; phage(gi169936046)0.0Showinfo_outline
29complement(3085349..3086182)PHAGE_Salmon_Fels_2_NC_010463: capsid-scaffolding protein; NCTC9103_03015; phage(gi169936047)2.00e-174Showinfo_outline
303086325..3088091PHAGE_Salmon_Fels_2_NC_010463: terminase ATPase subunit; NCTC9103_03016; phage(gi169936048)0.0Showinfo_outline
313088091..3089122PHAGE_Salmon_Fels_2_NC_010463: portal vertex protein; NCTC9103_03017; phage(gi169936049)0.0Showinfo_outline
32complement(3089163..3089780)PHAGE_Entero_vB_IME197_NC_028671: hypothetical protein; NCTC9103_03018; phage(gi966199034)8.31e-17Showinfo_outline
33complement(3089780..3090511)Uncharacterised protein; NCTC9103_030190.0Showinfo_outline
34complement(3090800..3091642)PHAGE_Salmon_SEN5_NC_028701: hypothetical protein; NCTC9103_03020; phage(gi966201555)5.40e-77Showinfo_outline
35complement(3091642..3091857)PHAGE_Salmon_SEN5_NC_028701: hypothetical protein; NCTC9103_03021; phage(gi966201554)1.51e-06Showinfo_outline
36complement(3092128..3092361)PHAGE_Salmon_Fels_2_NC_010463: TumB protein; NCTC9103_03022; phage(gi169936052)8.28e-50Showinfo_outline
37complement(3092373..3092561)PHAGE_Salmon_Fels_2_NC_010463: hypothetical protein; NCTC9103_03023; phage(gi169936053)1.61e-38Showinfo_outline
38complement(3092714..3095128)PHAGE_Salmon_Fels_2_NC_010463: P2 gpA-like protein; NCTC9103_03024; phage(gi169936054)0.0Showinfo_outline
39complement(3095125..3095982)PHAGE_Salmon_Fels_2_NC_010463: DNA adenine methylase-like protein; NCTC9103_03025; phage(gi169936055)2.24e-151Showinfo_outline
40complement(3095979..3096206)PHAGE_Salmon_Fels_2_NC_010463: DksA-like zinc finger domain containing protein; NCTC9103_03026; phage(gi169936056)4.69e-44Showinfo_outline
41complement(3096206..3096439)PHAGE_Salmon_Fels_2_NC_010463: hypothetical protein; NCTC9103_03027; phage(gi169936057)6.22e-36Showinfo_outline
42complement(3096507..3096848)PHAGE_Salmon_Fels_2_NC_010463: hypothetical protein; NCTC9103_03028; phage(gi169936058)9.45e-68Showinfo_outline
43complement(3096812..3097012)PHAGE_Salmon_Fels_2_NC_010463: hypothetical protein; NCTC9103_03029; phage(gi169936060)7.86e-17Showinfo_outline
44complement(3097020..3097529)PHAGE_Salmon_Fels_2_NC_010463: bacteriophage regulatory protein CII; NCTC9103_03030; phage(gi169936061)9.67e-112Showinfo_outline
45complement(3097562..3097783)PHAGE_Haemop_HP2_NC_003315: orf2(S)cox; NCTC9103_03031; phage(gi17981819)1.65e-08Showinfo_outline
463097872..3098828PHAGE_Salmon_Fels_2_NC_010463: P2 CI-like protein; NCTC9103_03032; phage(gi169936063)1.11e-38Showinfo_outline
473098829..3099611Uncharacterised protein; NCTC9103_030330.0Showinfo_outline
483099614..3100684PHAGE_Lactob_Lj965_NC_005355: hypothetical protein; NCTC9103_03034; phage(gi41179236)1.98e-83Showinfo_outline
493100662..3101033PHAGE_Lactob_Lj965_NC_005355: hypothetical protein; NCTC9103_03035; phage(gi41179237)1.68e-40Showinfo_outline
503100870..3100882attR0.0Showinfo_outline
513101112..3102164PHAGE_Salmon_Fels_2_NC_010463: integrase; NCTC9103_03036; phage(gi169936064)2.30e-128Showinfo_outline
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Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)

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Length: 4774029 bps
Phages: 4
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Click on a region in the genome above to show details here.
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Click on a sequence to see details.
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Click on a sequence to see details.
Lysis
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Fiber Protein
Plate Protein
tRNA

Download data as .txt file: png_input file_download