Submission Results

Sequence Name: Not Available

GenBank Accession Number: UGEZ01000005.1

GenInfo (GI) Number: 0000000000

Download Results: UGEZ01000005.1.PHASTER.zip

gi|00000000|ref|UGEZ01000005.1| Escherichia coli strain NCTC10674 genome assembly, contig: 4769126, gc%: 50.57%

Download summary as .txt file: summary.txt file_download

Total: 11 prophage regions have been identified, of which 3 regions are intact, 6 regions are incomplete, and 2 regions are questionable.

RegionRegion LengthCompletenessScore# Total ProteinsRegion PositionMost Common PhageGC %Details
133.3Kbincomplete40211201422-1234763 info_outlinePHAGE_Entero_SfV_NC_003444(11)45.38%Show info_outline
241.1Kbintact150431227578-1268697 info_outlinePHAGE_Entero_PsP3_NC_005340(33)51.20%Show info_outline
325.5Kbquestionable70311373609-1399115 info_outlinePHAGE_Escher_TL_2011b_NC_019445(22)48.18%Show info_outline
420.4Kbincomplete60241970625-1991121 info_outlinePHAGE_Salmon_118970_sal3_NC_031940(6)46.31%Show info_outline
535.7Kbintact100312383246-2418989 info_outlinePHAGE_Salmon_118970_sal3_NC_031940(8)45.97%Show info_outline
624.8Kbquestionable70342696911-2721734 info_outlinePHAGE_Entero_phiP27_NC_003356(11)48.09%Show info_outline
720Kbintact100222950281-2970365 info_outlinePHAGE_Acinet_vB_AbaM_ME3_NC_041884(4)51.86%Show info_outline
830.7Kbincomplete40153231608-3262321 info_outlinePHAGE_Salmon_RE_2010_NC_019488(3)50.63%Show info_outline
932.2Kbincomplete60233284646-3316935 info_outlinePHAGE_Shigel_Sf6_NC_005344(5)47.82%Show info_outline
1029.7Kbincomplete40343532076-3561810 info_outlinePHAGE_Entero_lambda_NC_001416(8)45.65%Show info_outline
1130.2Kbincomplete50263819740-3849976 info_outlinePHAGE_Entero_mEp460_NC_019716(15)47.50%Show info_outline
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Region: The number assigned to the region.
Region Length: The length of the sequence of that region (in bp).
Completeness: A prediction of whether the region contains a intact or incomplete prophage based on the above criteria.
Score: The score of the region based on the above criteria.
# Total Proteins: The number of ORFs present in the region.
Region Position: The start and end positions of the region on the bacterial chromosome.
Most Common Phage: The phage(s) with the highest number of proteins most similar to those in the region.
GC %: The percentage of GC nucleotides of the region.

Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:

  1. If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
Method 2:
  1. If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
Method 3:
  1. If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
  2. If the size of the region is greater than 30 Kb, the score will be increased by 10.
  3. If there are at least 40 proteins in the region, the score will be increased by 10.
  4. If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
Compared the total score of method 2 with the total score of method 3, the bigger one is chosen as the total score of the region.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.

gi|00000000|ref|UGEZ01000005.1| Escherichia coli strain NCTC10674 genome assembly, contig: 4769126, gc%: 50.57%

Download details as .txt file: detail.txt file_download

Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File

Region 1, total 25 CDS

#CDS PositionBLAST HitE-ValueSequence
11201422..1201436attL0.0Showinfo_outline
2complement(1205125..1206354)PROPHAGE_Entero_Fels-2: integrase-like protein; NCTC10674_01365; phage(gi16766052)3.28e-151Showinfo_outline
31206604..1206615attL0.0Showinfo_outline
41206679..1207293Uncharacterised protein; NCTC10674_013660.0Showinfo_outline
51207297..1207986Uncharacterised protein; NCTC10674_013670.0Showinfo_outline
6complement(1208019..1209188)PHAGE_Cronob_phiES15_NC_018454: putative integrase; NCTC10674_01368; phage(gi401817566)0.0Showinfo_outline
7complement(1209149..1209355)PHAGE_Cronob_phiES15_NC_018454: putative excisionase; NCTC10674_01369; phage(gi401817567)1.27e-30Showinfo_outline
8complement(1209415..1209630)PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC10674_01370; phage(gi428782347)3.30e-21Showinfo_outline
9complement(1209627..1209989)PHAGE_Entero_SfV_NC_003444: hypothetical protein; NCTC10674_01371; phage(gi19549016)1.25e-78Showinfo_outline
10complement(1209980..1210516)PHAGE_Entero_SfV_NC_003444: hypothetical protein; NCTC10674_01372; phage(gi19549017)7.85e-129Showinfo_outline
11complement(1211259..1211933)PHAGE_Entero_SfV_NC_003444: repressor; NCTC10674_01373; phage(gi19549021)2.97e-167Showinfo_outline
121212024..1212224PHAGE_Entero_SfV_NC_003444: repressor; NCTC10674_01374; phage(gi19549022)3.54e-42Showinfo_outline
131212268..1212819PHAGE_Entero_SfV_NC_003444: hypothetical protein; e14; phage prophage; NCTC10674_01375(gi19549023)1.78e-120Showinfo_outline
141213645..1213881PHAGE_Entero_SfV_NC_003444: hypothetical protein; NCTC10674_01378; phage(gi19549025)8.14e-47Showinfo_outline
151213878..1214696PHAGE_Entero_SfV_NC_003444: replication protein; NCTC10674_01379; phage(gi19549026)0.0Showinfo_outline
161214699..1215187PHAGE_Entero_SfV_NC_003444: hypothetical protein; NCTC10674_01380; phage(gi19549027)1.70e-111Showinfo_outline
171215187..1215531PHAGE_Entero_SfV_NC_003444: DNA adenine methylase; NCTC10674_01381; phage(gi19549028)4.39e-73Showinfo_outline
181215562..1216551PHAGE_Entero_SfV_NC_003444: hypothetical protein; NCTC10674_01382; phage(gi19549032)0.0Showinfo_outline
191216569..1216910PHAGE_Shigel_SfII_NC_021857: antiterminator protein Q; NCTC10674_01383; phage(gi526244682)2.16e-57Showinfo_outline
20complement(1216923..1217471)Uncharacterised protein; NCTC10674_013840.0Showinfo_outline
21complement(1217458..1218384)Uncharacterised protein; NCTC10674_013850.0Showinfo_outline
221218649..1218852PHAGE_Entero_SfV_NC_003444: hypothetical protein; NCTC10674_01386; phage(gi19549034)8.40e-10Showinfo_outline
231219704..1221137PHAGE_Burkho_KL3_NC_015266: gp47; NCTC10674_01387; phage(gi327198092)2.09e-132Showinfo_outline
241222514..1222525attR0.0Showinfo_outline
251234763..1234777attR0.0Showinfo_outline

Region 2, total 45 CDS

#CDS PositionBLAST HitE-ValueSequence
11227578..1227589attL0.0Showinfo_outline
2complement(1234826..1235995)PHAGE_Entero_PsP3_NC_005340: tail protein; NCTC10674_01404; phage(gi41057378)0.0Showinfo_outline
3complement(1235992..1236477)PHAGE_Entero_PsP3_NC_005340: gp25; NCTC10674_01405; phage(gi41057377)5.21e-104Showinfo_outline
4complement(1236491..1238935)PHAGE_Entero_PsP3_NC_005340: gp24; NCTC10674_01406; phage(gi41057376)0.0Showinfo_outline
5complement(1239080..1239415)PHAGE_Entero_PsP3_NC_005340: gp23; NCTC10674_01407; phage(gi41057375)2.69e-72Showinfo_outline
6complement(1239479..1239997)PHAGE_Entero_PsP3_NC_005340: major tail tube protein; NCTC10674_01408; phage(gi41057374)8.09e-124Showinfo_outline
7complement(1240013..1241191)PHAGE_Entero_PsP3_NC_005340: major tail sheath protein; NCTC10674_01409; phage(gi41057373)0.0Showinfo_outline
8complement(1241323..1241919)PHAGE_Entero_HK106_NC_019768: tail fiber assembly protein; NCTC10674_01410; phage(gi428783304)7.66e-74Showinfo_outline
9complement(1241919..1242944)PHAGE_Escher_pro483_NC_028943: tail fiber protein; NCTC10674_01411; phage(gi971758531)1.87e-103Showinfo_outline
10complement(1242941..1243549)PHAGE_Escher_pro483_NC_028943: tail fibers protein; NCTC10674_01412; phage(gi971758530)3.04e-114Showinfo_outline
11complement(1243542..1244450)PHAGE_Entero_PsP3_NC_005340: baseplate assembly protein; NCTC10674_01413; phage(gi41057369)1.46e-177Showinfo_outline
12complement(1244457..1244804)PHAGE_Entero_PsP3_NC_005340: baseplate wedge subunit; NCTC10674_01414; phage(gi41057368)1.10e-74Showinfo_outline
13complement(1244801..1245436)PHAGE_Entero_PsP3_NC_005340: gp15; NCTC10674_01415; phage(gi41057367)9.12e-126Showinfo_outline
14complement(1245532..1246575)Uncharacterised protein; NCTC10674_014160.0Showinfo_outline
15complement(1246601..1247050)PHAGE_Entero_PsP3_NC_005340: gp14; NCTC10674_01417; phage(gi41057366)6.87e-80Showinfo_outline
16complement(1247043..1247510)PHAGE_Entero_PsP3_NC_005340: gp13; NCTC10674_01418; phage(gi41057365)2.51e-107Showinfo_outline
17complement(1247473..1247631)PHAGE_Entero_PsP3_NC_005340: gp12; NCTC10674_01419; phage(gi41057364)8.12e-29Showinfo_outline
18complement(1247618..1248031)PHAGE_Entero_PsP3_NC_005340: gp11; NCTC10674_01420; phage(gi41057363)3.25e-84Showinfo_outline
19complement(1248028..1248525)PHAGE_Entero_PsP3_NC_005340: gp10; NCTC10674_01421; phage(gi41057362)7.04e-115Showinfo_outline
20complement(1248512..1248808)PHAGE_Entero_PsP3_NC_005340: gp9; NCTC10674_01422; phage(gi41057361)2.32e-59Showinfo_outline
21complement(1248812..1249015)PHAGE_Entero_PsP3_NC_005340: gp8; NCTC10674_01423; phage(gi41057360)4.11e-38Showinfo_outline
22complement(1249015..1249524)PHAGE_Entero_PsP3_NC_005340: gp7; NCTC10674_01424; phage(gi41057359)5.40e-116Showinfo_outline
23complement(1249618..1250367)PHAGE_Entero_PsP3_NC_005340: terminase endonuclease subunit; NCTC10674_01425; phage(gi41057358)1.73e-160Showinfo_outline
24complement(1250372..1251439)PHAGE_Entero_PsP3_NC_005340: capsid protein; NCTC10674_01426; phage(gi41057357)0.0Showinfo_outline
25complement(1251516..1252370)PHAGE_Entero_PsP3_NC_005340: capsid-scaffolding protein; NCTC10674_01427; phage(gi41057356)0.0Showinfo_outline
261252536..1254305PHAGE_Entero_PsP3_NC_005340: terminase ATPase subunit; NCTC10674_01428; phage(gi41057355)0.0Showinfo_outline
271254307..1255353PHAGE_Entero_PsP3_NC_005340: portal vertex protein; NCTC10674_01429; phage(gi41057353)0.0Showinfo_outline
28complement(1255384..1256109)Uncharacterised protein; NCTC10674_014300.0Showinfo_outline
29complement(1256106..1256924)Uncharacterised protein; NCTC10674_014310.0Showinfo_outline
30complement(1257272..1258879)PHAGE_Cronob_phiES15_NC_018454: putative protein kinase; NCTC10674_01432; phage(gi401817584)4.64e-10Showinfo_outline
31complement(1259068..1259778)Uncharacterised protein; NCTC10674_014330.0Showinfo_outline
32complement(1259940..1260122)PHAGE_Entero_PsP3_NC_005340: TumA; NCTC10674_01434; phage(gi41057389)9.25e-35Showinfo_outline
33complement(1260237..1262459)PHAGE_Entero_PsP3_NC_005340: gp36; NCTC10674_01435; phage(gi41057388)0.0Showinfo_outline
34complement(1262461..1262682)PHAGE_Entero_PsP3_NC_005340: DksA-like zinc finger domain containing protein; NCTC10674_01436; phage(gi41057386)2.27e-43Showinfo_outline
35complement(1262682..1262909)PHAGE_Entero_PsP3_NC_005340: gp33; NCTC10674_01437; phage(gi41057385)1.43e-30Showinfo_outline
36complement(1262977..1263315)PHAGE_Salmon_RE_2010_NC_019488: hypothetical protein; NCTC10674_01438; phage(gi418489688)8.92e-50Showinfo_outline
37complement(1263279..1263479)PHAGE_Entero_PsP3_NC_005340: gp32; NCTC10674_01439; phage(gi41057384)6.83e-39Showinfo_outline
38complement(1263487..1263996)PHAGE_Entero_PsP3_NC_005340: gp31; NCTC10674_01440; phage(gi41057383)1.38e-97Showinfo_outline
39complement(1264029..1264400)PHAGE_Entero_PsP3_NC_005340: gp30; NCTC10674_01441; phage(gi41057382)1.82e-63Showinfo_outline
401264522..1265382PHAGE_Entero_PsP3_NC_005340: CI; NCTC10674_01442; phage(gi41057393)0.0Showinfo_outline
411265355..1265366attR0.0Showinfo_outline
421265391..1265729PHAGE_Entero_PsP3_NC_005340: gp28; NCTC10674_01443; phage(gi41057381)1.77e-75Showinfo_outline
431265752..1266801PHAGE_Entero_PsP3_NC_005340: integrase; NCTC10674_01444; phage(gi41057380)0.0Showinfo_outline
44complement(1266973..1267455)outer membrane lipoprotein; NCTC10674_014450.0Showinfo_outline
45complement(1267471..1268697)PHAGE_Bacill_G_NC_023719: gp350; NCTC10674_01446; phage(gi593777806)5.39e-19Showinfo_outline

Region 3, total 33 CDS

#CDS PositionBLAST HitE-ValueSequence
11373609..1373620attL0.0Showinfo_outline
21376919..1378385PHAGE_Staphy_42E_NC_007052: ORF012; NCTC10674_01546; phage(gi66395520)2.72e-36Showinfo_outline
31378454..1380031bifunctional GMP synthase/glutamine amidotransferase protein; NCTC10674_015470.0Showinfo_outline
41380224..1381480PHAGE_Escher_TL_2011b_NC_019445: putative integrase; NCTC10674_01548; phage(gi418487628)0.0Showinfo_outline
5complement(1381483..1382142)PHAGE_Entero_HK225_NC_019717: NinI protein; NCTC10674_01549; phage(gi428782438)2.52e-128Showinfo_outline
6complement(1382139..1382801)PHAGE_Escher_TL_2011b_NC_019445: putative adenine methylase; NCTC10674_01550; phage(gi418487629)4.28e-161Showinfo_outline
7complement(1382782..1383033)PHAGE_Escher_TL_2011b_NC_019445: hypothetical protein; NCTC10674_01551; phage(gi418487640)1.85e-53Showinfo_outline
8complement(1383191..1383439)PHAGE_Entero_Tyrion_NC_031077: membrane-associated initiation of head vertex; NCTC10674_01552; phage(gi100034)1.62e-51Showinfo_outline
9complement(1383489..1384370)PHAGE_Escher_TL_2011b_NC_019445: enterohemolysin 1; NCTC10674_01553; phage(gi418487630)0.0Showinfo_outline
10complement(1384367..1385188)PHAGE_Escher_TL_2011b_NC_019445: hypothetical protein; NCTC10674_01554; phage(gi418487642)0.0Showinfo_outline
11complement(1385185..1385484)PHAGE_Escher_TL_2011b_NC_019445: hypothetical protein; NCTC10674_01555; phage(gi418487643)3.63e-64Showinfo_outline
12complement(1385492..1386526)PHAGE_Entero_phi80_NC_021190: anti-toxin for Gam; NCTC10674_01556; phage(gi824479616)4.19e-89Showinfo_outline
13complement(1386535..1386684)PHAGE_Escher_TL_2011b_NC_019445: hypothetical protein; NCTC10674_01557; phage(gi418487644)7.91e-30Showinfo_outline
14complement(1386838..1387422)PHAGE_Escher_TL_2011b_NC_019445: helix-turn-helix protein; NCTC10674_01558; phage(gi418487631)1.11e-139Showinfo_outline
151387577..1387807PHAGE_Escher_TL_2011b_NC_019445: hypothetical protein; NCTC10674_01559; phage(gi418487645)2.69e-52Showinfo_outline
161387958..1388158PHAGE_Escher_phiV10_NC_007804: hypothetical protein; NCTC10674_01560; phage(gi89152475)9.89e-44Showinfo_outline
171388342..1388695PHAGE_Escher_TL_2011b_NC_019445: hypothetical protein; NCTC10674_01561; phage(gi418487653)2.57e-53Showinfo_outline
181388688..1389026PHAGE_Escher_TL_2011b_NC_019445: hypothetical protein; NCTC10674_01562; phage(gi418487654)1.54e-75Showinfo_outline
191389148..1390404PHAGE_Escher_TL_2011b_NC_019445: putative terminase small subunit; NCTC10674_01563; phage(gi418487632)1.07e-63Showinfo_outline
201390414..1390554PHAGE_Escher_phiV10_NC_007804: putative integral membrane protein; NCTC10674_01564; phage(gi89152471)6.09e-22Showinfo_outline
21complement(1390597..1390854)PHAGE_Escher_TL_2011b_NC_019445: hypothetical protein; NCTC10674_01565; phage(gi418487676)1.41e-57Showinfo_outline
221391050..1393431PHAGE_Escher_TL_2011b_NC_019445: hypothetical protein; NCTC10674_01566; phage(gi418487677)2.16e-112Showinfo_outline
231393499..1394839Uncharacterised protein; NCTC10674_015670.0Showinfo_outline
24complement(1395028..1395120)PHAGE_Salmon_HK620_NC_002730: integrase; NCTC10674_01568; phage(gi13559824)1.72e-14Showinfo_outline
251395355..1395759PHAGE_Escher_TL_2011b_NC_019445: hypothetical protein; NCTC10674_01569; phage(gi418487679)1.99e-71Showinfo_outline
261395746..1396054PHAGE_Escher_TL_2011b_NC_019445: hypothetical protein; NCTC10674_01570; phage(gi418487680)1.62e-66Showinfo_outline
271396044..1396673PHAGE_Escher_TL_2011b_NC_019445: putative endolysin; NCTC10674_01571; phage(gi418487637)1.86e-148Showinfo_outline
281396670..1397152PHAGE_Escher_TL_2011b_NC_019445: hypothetical protein; NCTC10674_01572; phage(gi418487681)7.31e-91Showinfo_outline
29complement(1397370..1397909)PHAGE_Escher_TL_2011b_NC_019445: hypothetical protein; NCTC10674_01573; phage(gi418487682)1.60e-124Showinfo_outline
30complement(1397925..1398440)PHAGE_Escher_TL_2011b_NC_019445: putative outer membrane lipoprotein; NCTC10674_01574; phage(gi418487638)7.57e-122Showinfo_outline
311398560..1398571attR0.0Showinfo_outline
32complement(1398754..1398927)PHAGE_Escher_TL_2011b_NC_019445: hypothetical protein; NCTC10674_01575; phage(gi418487683)4.30e-35Showinfo_outline
331398963..1399115PHAGE_Escher_TL_2011b_NC_019445: hypothetical protein; NCTC10674_01576; phage(gi418487684)4.14e-27Showinfo_outline

Region 4, total 29 CDS

#CDS PositionBLAST HitE-ValueSequence
11970625..1970655attL0.0Showinfo_outline
2complement(1970708..1971733)PHAGE_Salmon_118970_sal3_NC_031940: baseplate subunit; NCTC10674_02099; phage(gi100105)1.02e-129Showinfo_outline
3complement(1971733..1971936)PHAGE_Pectob_ZF40_NC_019522: hypothetical protein; NCTC10674_02100; phage(gi422936643)1.58e-06Showinfo_outline
4complement(1971995..1974466)PHAGE_Salmon_118970_sal3_NC_031940: baseplate hub subunit; NCTC10674_02101; phage(gi100107)1.01e-69Showinfo_outline
5complement(1974559..1974750)putative prophage protein; NCTC10674_021020.0Showinfo_outline
6complement(1974747..1974935)cell division inhibition protein; NCTC10674_021030.0Showinfo_outline
71975336..1975500Uncharacterised protein; NCTC10674_021050.0Showinfo_outline
8complement(1975504..1975722)putative prophage protein; NCTC10674_021060.0Showinfo_outline
9complement(1975752..1975880)putative prophage protein; NCTC10674_021070.0Showinfo_outline
10complement(1975882..1976118)PHAGE_Salico_CGphi29_NC_020844: hypothetical protein; NCTC10674_02108; phage(gi472340166)1.51e-11Showinfo_outline
11complement(1976303..1976722)PHAGE_Entero_c_1_NC_019706: prophage repressor; NCTC10674_02109; phage(gi428781782)7.01e-32Showinfo_outline
121976823..1977104PHAGE_Entero_c_1_NC_019706: prophage antirepressor; NCTC10674_02110; phage(gi428781783)5.92e-33Showinfo_outline
131977088..1977513PHAGE_Entero_mEp237_NC_019704: CII protein; NCTC10674_02111; phage(gi435439306)1.36e-05Showinfo_outline
141977585..1978655PHAGE_Entero_phiP27_NC_003356: hypothetical protein; NCTC10674_02112; phage(gi18249881)8.73e-33Showinfo_outline
151978696..1979118PHAGE_Shigel_Stx_NC_029120: LygF; NCTC10674_02113; phage(gi985761265)6.23e-62Showinfo_outline
16complement(1979265..1980074)PHAGE_Escher_pro147_NC_028896: putative metal-binding domain-containing protein; NCTC10674_02114; phage(gi971753727)0.0Showinfo_outline
171981826..1982953PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; NCTC10674_02116; phage(gi557307571)2.00e-108Showinfo_outline
181982954..1983319PHAGE_Shigel_Stx_NC_029120: crossover junction endodeoxyribonuclease rusA; NCTC10674_02117; phage(gi985761276)3.99e-51Showinfo_outline
191983316..1983984PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage antiterminator protein Q; NCTC10674_02118; phage(gi169257244)4.43e-100Showinfo_outline
201984636..1985223envelope protein encoded within prophage CP-933N; NCTC10674_021190.0Showinfo_outline
211985250..1985325tRNA0.0Showinfo_outline
221985406..1985481tRNA0.0Showinfo_outline
231985485..1985559tRNA0.0Showinfo_outline
241986018..1986410PHAGE_Entero_phiP27_NC_003356: putative holin; NCTC10674_02123; phage(gi18249892)1.92e-75Showinfo_outline
251986400..1986675PHAGE_Entero_phiP27_NC_003356: putative holin; NCTC10674_02124; phage(gi18249893)6.71e-57Showinfo_outline
261986678..1987055PHAGE_Entero_phiP27_NC_003356: putative endolysin; NCTC10674_02125; phage(gi18249894)4.67e-83Showinfo_outline
27complement(1987127..1987702)lipopolysaccharide core heptose(II)-phosphate phosphatase; NCTC10674_021260.0Showinfo_outline
281988135..1989529PHAGE_Entero_lambda_NC_001416: tail:host specificity protein; NCTC10674_02127; phage(gi9626264)0.0Showinfo_outline
291991121..1991151attR0.0Showinfo_outline

Region 5, total 35 CDS

#CDS PositionBLAST HitE-ValueSequence
12383246..2383257attL0.0Showinfo_outline
2complement(2383401..2384681)PHAGE_Entero_YYZ_2008_NC_011356: putative integrase; Qin; phage prophage; NCTC10674_02538(gi209427727)0.0Showinfo_outline
3complement(2384716..2384952)PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage excisionase; NCTC10674_02539; phage(gi169257269)1.10e-20Showinfo_outline
4complement(2385047..2387008)PHAGE_Salmon_118970_sal3_NC_031940: baseplate hub subunit; NCTC10674_02540; phage(gi100107)4.83e-62Showinfo_outline
52387261..2387617PHAGE_Pectob_ZF40_NC_019522: putative methylase; NCTC10674_02541; phage(gi422936660)1.66e-48Showinfo_outline
62388770..2388949membrane protein; NCTC10674_025420.0Showinfo_outline
72389195..2389209attL0.0Showinfo_outline
82389284..2390597putative integrase/transposase; NCTC10674_025440.0Showinfo_outline
9complement(2391034..2391366)Qin prophage protein; NCTC10674_025450.0Showinfo_outline
102391899..2392138antitoxin of the RelE-RelB toxin-antitoxin system and transcriptional repressor of relBEF; NCTC10674_025460.0Showinfo_outline
112392138..2392425toxin of the RelE-RelB toxin-antitoxin system; NCTC10674_025470.0Showinfo_outline
122392484..2392498attR0.0Showinfo_outline
132392497..2392652PHAGE_Entero_933W_NC_000924: host killer protein; NCTC10674_02548; phage(gi9632541)1.17e-25Showinfo_outline
142392869..2393120putative prophage protein; NCTC10674_025490.0Showinfo_outline
152393467..2394516PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC10674_02550; phage(gi428782365)2.80e-140Showinfo_outline
162394530..2395282PHAGE_Entero_mEp460_NC_019716: late gene regulator; NCTC10674_02551; phage(gi428782366)3.20e-177Showinfo_outline
17complement(2395704..2395916)cold shock-like protein CspF; NCTC10674_025520.0Showinfo_outline
18complement(2397034..2397153)Uncharacterised protein; NCTC10674_025540.0Showinfo_outline
192397195..2397401PHAGE_Entero_mEp460_NC_019716: porin; NCTC10674_02555; phage(gi428782370)2.64e-40Showinfo_outline
202397406..2397717PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC10674_02556; phage(gi428782371)5.21e-40Showinfo_outline
212397714..2398247PHAGE_Entero_mEp460_NC_019716: endolysin; NCTC10674_02557; phage(gi428782372)1.35e-121Showinfo_outline
222398244..2398741PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; NCTC10674_02558; phage(gi16765210)1.80e-62Showinfo_outline
232399990..2400163GnsA/GnsB family transcriptional regulator; NCTC10674_025600.0Showinfo_outline
24complement(2400315..2400725)PHAGE_Entero_lambda_NC_001416: putative envelope protein; NCTC10674_02561; phage(gi19263396)1.04e-75Showinfo_outline
252401405..2401950PHAGE_Entero_DE3_NC_042057: RecA-like recombination protein; NCTC10674_02562; phage(gi100035)3.88e-129Showinfo_outline
262402311..2403399PHAGE_Entero_mEp460_NC_019716: host specificity protein; NCTC10674_02563; phage(gi428782334)0.0Showinfo_outline
272403396..2403674PROPHAGE_Escher_MG1655: Qin prophage; predicted side tail fibre assembly protein; NCTC10674_02564; phage(gi16129506)1.88e-34Showinfo_outline
28complement(2404347..2404937)PHAGE_Entero_Mu_NC_000929: Gin; NCTC10674_02566; phage(gi9633542)2.03e-30Showinfo_outline
29complement(2405254..2405487)PHAGE_Salmon_118970_sal3_NC_031940: base plate hub; NCTC10674_02567; phage(gi100103)9.57e-06Showinfo_outline
302406272..2407555PHAGE_Burkho_phi1026b_NC_005284: gp59; NCTC10674_02568; phage(gi38707949)7.81e-28Showinfo_outline
312407644..2409104putative sugar dehydrogenase; NCTC10674_025690.0Showinfo_outline
32complement(2409139..2409342)PHAGE_Salmon_SSU5_NC_018843: putative selenium-binding protein YdfZ; NCTC10674_02570; phage(gi410491512)4.86e-18Showinfo_outline
33complement(2409519..2410205)GntR family transcriptional regulator; NCTC10674_025710.0Showinfo_outline
34complement(2410294..2411040)PHAGE_Prochl_P_TIM68_NC_028955: hypothetical protein; NCTC10674_02572; phage(gi971760361)8.52e-10Showinfo_outline
352418989..2419000attR0.0Showinfo_outline

Region 6, total 38 CDS

#CDS PositionBLAST HitE-ValueSequence
12696911..2696922attL0.0Showinfo_outline
22697257..2697814PHAGE_Vibrio_VHML_NC_004456: ORF48; NCTC10674_02833; phage(gi27311215)6.51e-38Showinfo_outline
3complement(2697851..2698438)PHAGE_Entero_phiP27_NC_003356: hypothetical protein; NCTC10674_02834; phage(gi18249921)7.69e-106Showinfo_outline
4complement(2698453..2699349)PHAGE_Entero_phiP27_NC_003356: putative tail fiber protein; NCTC10674_02835; phage(gi18249920)1.63e-13Showinfo_outline
5complement(2699628..2700599)PHAGE_Pseudo_PPpW_3_NC_023006: putative tail protein GpU; NCTC10674_02836; phage(gi564292503)1.22e-20Showinfo_outline
6complement(2700702..2701367)PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; small terminase subunit; Lambda Nu1 homolog; NCTC10674_02837; phage(gi169257236)8.47e-75Showinfo_outline
7complement(2701994..2702290)PHAGE_Entero_phiP27_NC_003356: hypothetical protein; NCTC10674_02838; phage(gi18249897)2.55e-66Showinfo_outline
8complement(2702541..2702762)PHAGE_Entero_phiP27_NC_003356: hypothetical protein; NCTC10674_02839; phage(gi18249896)9.62e-15Showinfo_outline
9complement(2702895..2703176)Uncharacterised protein; NCTC10674_028400.0Showinfo_outline
10complement(2703247..2703624)PHAGE_Entero_phiP27_NC_003356: putative endolysin; NCTC10674_02841; phage(gi18249894)3.59e-84Showinfo_outline
11complement(2703627..2703902)PHAGE_Entero_phiP27_NC_003356: putative holin; NCTC10674_02842; phage(gi18249893)2.84e-57Showinfo_outline
12complement(2703892..2704284)PHAGE_Entero_phiP27_NC_003356: putative holin; NCTC10674_02843; phage(gi18249892)2.42e-66Showinfo_outline
13complement(2704703..2704966)PHAGE_Entero_phiP27_NC_003356: shiga toxin 2e B-subunit; NCTC10674_02844; phage(gi18249890)3.31e-59Showinfo_outline
14complement(2704979..2705938)PHAGE_Entero_phiP27_NC_003356: shiga toxin 2e A-subunit; NCTC10674_02845; phage(gi18249889)0.0Showinfo_outline
15complement(2706029..2706105)tRNA0.0Showinfo_outline
16complement(2706207..2706282)tRNA0.0Showinfo_outline
17complement(2706323..2707381)PHAGE_Entero_phiP27_NC_003356: putative DNA methylase; NCTC10674_02848; phage(gi18249888)0.0Showinfo_outline
18complement(2707532..2707729)PHAGE_Entero_phiP27_NC_003356: hypothetical protein; NCTC10674_02849; phage(gi18249887)6.50e-42Showinfo_outline
19complement(2708077..2708358)Uncharacterised protein; NCTC10674_028500.0Showinfo_outline
20complement(2708433..2708813)PHAGE_Entero_BP_4795_NC_004813: putative antitermination protein Q; NCTC10674_02851; phage(gi157166023)9.43e-73Showinfo_outline
21complement(2708803..2709180)PHAGE_Shigel_Stx_NC_029120: crossover junction endodeoxyribonuclease rusA; NCTC10674_02852; phage(gi985761276)1.18e-49Showinfo_outline
22complement(2709181..2710236)PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC10674_02853; phage(gi428782365)5.55e-110Showinfo_outline
23complement(2710583..2710843)putative prophage protein; NCTC10674_028540.0Showinfo_outline
24complement(2711622..2712581)Uncharacterised protein; NCTC10674_028560.0Showinfo_outline
25complement(2713022..2713429)PHAGE_Shigel_Stx_NC_029120: LygF; NCTC10674_02857; phage(gi985761265)4.04e-66Showinfo_outline
26complement(2713470..2714435)PHAGE_Shigel_SfIV_NC_022749: replication protein; NCTC10674_02858; phage(gi557307567)7.86e-72Showinfo_outline
27complement(2714416..2714937)PHAGE_Pectob_ZF40_NC_019522: putative cII repressor; NCTC10674_02859; phage(gi422936652)4.03e-05Showinfo_outline
28complement(2714921..2715151)PHAGE_Pectob_ZF40_NC_019522: putative cro anti-repressor; NCTC10674_02860; phage(gi422936651)9.10e-12Showinfo_outline
292715235..2715642PHAGE_Cronob_phiES15_NC_018454: putative transcriptional repressor DicA; NCTC10674_02861; phage(gi401817574)2.91e-39Showinfo_outline
302715809..2715964PHAGE_Salico_CGphi29_NC_020844: hypothetical protein; NCTC10674_02862; phage(gi472340166)2.17e-11Showinfo_outline
312715966..2716094putative prophage protein; NCTC10674_028630.0Showinfo_outline
322716106..2716666PHAGE_Entero_VT2phi_272_NC_028656: hypothetical protein; NCTC10674_02864; phage(gi966197735)7.18e-13Showinfo_outline
33complement(2716623..2717192)Uncharacterised protein; NCTC10674_028650.0Showinfo_outline
342717431..2717628inhibitor of cell division encoded within prophage CP-933U; NCTC10674_028660.0Showinfo_outline
352717619..2717813phage protein; NCTC10674_028670.0Showinfo_outline
362717905..2720307PHAGE_Salmon_118970_sal3_NC_031940: baseplate hub subunit; NCTC10674_02868; phage(gi100107)6.32e-62Showinfo_outline
372720598..2721728PHAGE_Entero_HK022_NC_002166: integrase; NCTC10674_02869; phage(gi9634144)1.19e-68Showinfo_outline
382721734..2721745attR0.0Showinfo_outline

Region 7, total 22 CDS

#CDS PositionBLAST HitE-ValueSequence
12950281..2952371PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; NCTC10674_03117; phage(gi100064)5.49e-07Showinfo_outline
2complement(2952885..2953271)putative tellurium resistance protein TerF; NCTC10674_031180.0Showinfo_outline
3complement(2953693..2954268)PHAGE_Acinet_vB_AbaM_ME3_NC_041884: putative virion structural protein; NCTC10674_03119; phage(gi100294)1.30e-19Showinfo_outline
4complement(2954337..2954915)PHAGE_Acinet_vB_AbaM_ME3_NC_041884: putative virion structural protein; NCTC10674_03120; phage(gi100294)7.56e-32Showinfo_outline
5complement(2954964..2956004)PHAGE_Escher_phAPEC8_NC_020079: integral membrane protein TerC; NCTC10674_03121; phage(gi448260482)2.21e-99Showinfo_outline
6complement(2956027..2956482)PHAGE_Erwini_vB_EamM_ChrisDB_NC_031126: DNA topoisomerase medium subunit; NCTC10674_03122; phage(gi100004)1.45e-07Showinfo_outline
7complement(2956505..2957662)TerA; NCTC10674_031230.0Showinfo_outline
8complement(2957662..2958243)PHAGE_Bacill_CP_51_NC_025423: putative resistance protein; NCTC10674_03124; phage(gi725949538)1.74e-20Showinfo_outline
92958566..2959624ATP-grasp domain-containing protein; NCTC10674_031250.0Showinfo_outline
102959634..2960776PHAGE_Acinet_vB_AbaM_ME3_NC_041884: putative virion structural protein; NCTC10674_03126; phage(gi100292)4.90e-38Showinfo_outline
112960769..2961542PHAGE_Acinet_vB_AbaM_ME3_NC_041884: hypothetical protein; NCTC10674_03127; phage(gi100291)1.11e-07Showinfo_outline
122961544..2962623PHAGE_Acinet_vB_AbaM_ME3_NC_041884: hypothetical protein; NCTC10674_03128; phage(gi100290)9.91e-48Showinfo_outline
132962623..2963579ATP/GTP-binding protein; NCTC10674_031290.0Showinfo_outline
142963590..2964798PHAGE_Clostr_phiCD146_NC_028958: hypothetical protein; NCTC10674_03130; phage(gi971820170)3.14e-13Showinfo_outline
152964816..2965283TerW; NCTC10674_031310.0Showinfo_outline
162965544..2965873Uncharacterised protein; NCTC10674_031320.0Showinfo_outline
172965860..2966240PHAGE_Stx2_c_1717_NC_011357: transposase; NCTC10674_03133; phage(gi209447152)5.38e-14Showinfo_outline
182966283..2967140PHAGE_Stx2_c_1717_NC_011357: transposase; NCTC10674_03134; phage(gi209447153)2.96e-32Showinfo_outline
19complement(2967144..2968757)PHAGE_Stx2_c_1717_NC_011357: transposase; NCTC10674_03135; phage(gi209447153)0.0Showinfo_outline
20complement(2968788..2969138)PHAGE_Stx2_c_1717_NC_011357: transposase; NCTC10674_03136; phage(gi209447152)1.90e-50Showinfo_outline
21complement(2969135..2969560)PHAGE_Stx2_c_1717_NC_011357: truncated transposase; NCTC10674_03137; phage(gi209447151)3.34e-14Showinfo_outline
222969880..2970365PHAGE_Stx2_c_1717_NC_011357: transposase; NCTC10674_03138; phage(gi209447153)3.90e-28Showinfo_outline

Region 8, total 17 CDS

#CDS PositionBLAST HitE-ValueSequence
13231608..3231620attL0.0Showinfo_outline
23242941..3243654PHAGE_Strept_9874_NC_031023: hypothetical protein; NCTC10674_03386; phage(gi100020)4.06e-13Showinfo_outline
3complement(3244276..3244608)Uncharacterised protein; NCTC10674_033870.0Showinfo_outline
4complement(3244699..3246399)PHAGE_Haemop_HP2_NC_003315: orf35; NCTC10674_03388; phage(gi17981851)1.26e-155Showinfo_outline
5complement(3246402..3246947)PHAGE_Haemop_HP2_NC_003315: orf34; NCTC10674_03389; phage(gi17981850)2.24e-32Showinfo_outline
6complement(3246919..3247644)PHAGE_Haemop_HP2_NC_003315: orf33; NCTC10674_03390; phage(gi17981849)1.22e-14Showinfo_outline
7complement(3247634..3248221)PHAGE_Entero_HK630_NC_019723: tail fiber assembly protein; NCTC10674_03391; phage(gi428782810)1.48e-72Showinfo_outline
8complement(3248258..3248524)Uncharacterised protein; NCTC10674_033920.0Showinfo_outline
9complement(3248533..3248706)Uncharacterised protein; NCTC10674_033930.0Showinfo_outline
10complement(3248716..3249219)PHAGE_Salmon_RE_2010_NC_019488: regulatory protein; NCTC10674_03394; phage(gi418489686)2.28e-47Showinfo_outline
11complement(3249250..3249471)putative regulator from bacteriophage origin; NCTC10674_033950.0Showinfo_outline
123249607..3250188PHAGE_Erwini_ENT90_NC_019932: CI repressor protein; NCTC10674_03396; phage(gi431810951)1.80e-44Showinfo_outline
133250190..3251230PHAGE_Erwini_ENT90_NC_019932: phage integrase family protein; NCTC10674_03397; phage(gi431810942)1.19e-150Showinfo_outline
143251398..3251526Mn(2)-response protein, MntR-repressed; NCTC10674_033980.0Showinfo_outline
153251798..3253381membrane protein YbiP; NCTC10674_033990.0Showinfo_outline
16complement(3253430..3253945)PHAGE_Salmon_Fels_1_NC_010391: putative Lom-like outer membrane protein; NCTC10674_03400; phage(gi169257198)2.49e-25Showinfo_outline
173262321..3262333attR0.0Showinfo_outline

Region 9, total 27 CDS

#CDS PositionBLAST HitE-ValueSequence
13284646..3284657attL0.0Showinfo_outline
23286488..3286499attL0.0Showinfo_outline
33299495..3300652PHAGE_Shigel_Sf6_NC_005344: gene 16 protein; NCTC10674_03445; phage(gi41057294)0.0Showinfo_outline
43300817..3301047Uncharacterised protein; NCTC10674_034460.0Showinfo_outline
5complement(3300941..3302092)Uncharacterised protein; NCTC10674_034470.0Showinfo_outline
6complement(3302160..3303524)Uncharacterised protein; NCTC10674_034480.0Showinfo_outline
73303778..3304143PROPHAGE_Ralsto_GMI1000: ISRSO10-transposase ORFA protein; NCTC10674_03449; phage(gi17546153)9.81e-59Showinfo_outline
83304101..3305006PROPHAGE_Escher_CFT073: insertion element IS2 transposase InsD; NCTC10674_03450; phage(gi26249446)0.0Showinfo_outline
9complement(3304846..3305580)PHAGE_Shigel_Sf6_NC_005344: gene 14 protein; NCTC10674_03451; phage(gi41057292)2.27e-66Showinfo_outline
10complement(3305711..3307552)PHAGE_Salmon_ST160_NC_014900: Gp16; NCTC10674_03452; phage(gi318065961)0.0Showinfo_outline
11complement(3307552..3307983)PHAGE_Salmon_vB_SemP_Emek_NC_018275: injection protein; NCTC10674_03453; phage(gi399498803)2.36e-21Showinfo_outline
12complement(3308103..3308318)PHAGE_Shigel_Sf6_NC_005344: gene 40 protein; NCTC10674_03454; phage(gi41057317)1.23e-45Showinfo_outline
133308424..3309056PHAGE_Entero_Sf101_NC_027398: repressor cI; NCTC10674_03455; phage(gi849122301)1.40e-153Showinfo_outline
143309053..3309457PHAGE_Shigel_Sf6_NC_005344: gene 38 protein; NCTC10674_03456; phage(gi41057316)4.42e-94Showinfo_outline
153309527..3309637Uncharacterised protein; NCTC10674_034570.0Showinfo_outline
163309811..3310134PHAGE_Shigel_Sf6_NC_005344: gene 37 protein; NCTC10674_03458; phage(gi41057315)1.24e-64Showinfo_outline
173310143..3311012Uncharacterised protein; NCTC10674_034590.0Showinfo_outline
183311201..3311569PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC10674_03460; phage(gi100017)5.16e-84Showinfo_outline
193311665..3311676attR0.0Showinfo_outline
203311775..3311939PHAGE_Entero_SfI_NC_027339: host-killing protein; NCTC10674_03462; phage(gi849250261)2.92e-27Showinfo_outline
213311993..3312289PHAGE_Entero_933W_NC_000924: host-nuclease inhibitor protein Gam; NCTC10674_03463; phage(gi9632481)4.18e-67Showinfo_outline
223312295..3312564PHAGE_Shigel_Stx_NC_029120: recombinational DNA repair protein RecT; NCTC10674_03464; phage(gi985761251)5.93e-55Showinfo_outline
233312533..3312943PHAGE_Entero_c_1_NC_019706: hypothetical protein; NCTC10674_03465; phage(gi428781768)3.85e-29Showinfo_outline
243313074..3313772PHAGE_Salmon_SSU5_NC_018843: hypothetical protein; NCTC10674_03466; phage(gi410491511)7.35e-138Showinfo_outline
253314009..3314176PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC10674_03467; phage(gi100006)4.54e-34Showinfo_outline
263314412..3315482PHAGE_Entero_HK106_NC_019768: integrase; NCTC10674_03468; phage(gi428783305)0.0Showinfo_outline
273316935..3316946attR0.0Showinfo_outline

Region 10, total 36 CDS

#CDS PositionBLAST HitE-ValueSequence
13532076..3532090attL0.0Showinfo_outline
2complement(3539617..3540024)PHAGE_Entero_DE3_NC_042057: recombination endonuclease subunit; NCTC10674_03685; phage(gi100054)7.05e-69Showinfo_outline
3complement(3539979..3541565)PHAGE_Entero_DE3_NC_042057: recombination endonuclease subunit; NCTC10674_03686; phage(gi100054)0.0Showinfo_outline
4complement(3541531..3542391)PHAGE_Entero_DE3_NC_042057: RecA-like recombination protein; NCTC10674_03687; phage(gi100035)3.78e-120Showinfo_outline
5complement(3543139..3543345)PHAGE_Entero_DE3_NC_042057: membrane-associated initiation of head vertex; predicted; phage protein; NCTC10674_03688(gi100034)6.10e-43Showinfo_outline
63543631..3544041PHAGE_Entero_DE3_NC_042057: replication and recombination DNA helicase; NCTC10674_03689; phage(gi100033)9.72e-96Showinfo_outline
73544332..3544625PHAGE_Escher_PA28_NC_041935: endonuclease II; NCTC10674_03690; phage(gi100065)6.91e-64Showinfo_outline
8complement(3544657..3545118)PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC10674_03691; phage(gi100031)5.49e-105Showinfo_outline
9complement(3545115..3545612)PHAGE_Entero_SfI_NC_027339: lysozyme; NCTC10674_03692; phage(gi849250312)1.10e-117Showinfo_outline
10complement(3545612..3545827)PHAGE_Entero_VT2phi_272_NC_028656: holin; NCTC10674_03693; phage(gi966197762)5.28e-37Showinfo_outline
113546400..3547497outer membrane porin; DLP12 prophage; NCTC10674_036940.0Showinfo_outline
12complement(3547687..3548070)PHAGE_Shigel_Stx_NC_029120: antitermination protein Q; NCTC10674_03695; phage(gi985761278)3.75e-71Showinfo_outline
13complement(3548156..3548293)PHAGE_Entero_mEp237_NC_019704: hypothetical protein; small; phage protein; NCTC10674_03696(gi435439319)1.49e-13Showinfo_outline
14complement(3548293..3548655)PHAGE_Salmon_118970_sal4_NC_030919: membrane-associated initiation of head vertex; NCTC10674_03697; phage(gi100034)5.08e-38Showinfo_outline
15complement(3548652..3548942)PHAGE_Salmon_118970_sal4_NC_030919: replication and recombination DNA helicase; NCTC10674_03698; phage(gi100033)2.58e-42Showinfo_outline
16complement(3548935..3549105)PHAGE_Escher_HK639_NC_016158: NinE; NCTC10674_03699; phage(gi356870663)4.54e-20Showinfo_outline
17complement(3549105..3549560)PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; DNA; phage base-flipping protein; NCTC10674_03700(gi401817579)2.41e-79Showinfo_outline
18complement(3549775..3550572)DNA-binding transcriptional regulator; DLP12 prophage; NCTC10674_037010.0Showinfo_outline
19complement(3550582..3551133)kinase inhibitor; NCTC10674_037020.0Showinfo_outline
20complement(3551598..3553124)PHAGE_Burkho_Bcep176_NC_007497: gp53; DLP12; phage prophage; NCTC10674_03703(gi77864678)3.14e-36Showinfo_outline
21complement(3553379..3553711)PHAGE_Acinet_Acj61_NC_014661: putative quaternary ammonium compound-resistance protein qacE; NCTC10674_03704; phage(gi311992758)4.38e-10Showinfo_outline
22complement(3553779..3554081)PHAGE_Escher_PA28_NC_041935: replication and recombination DNA helicase; NCTC10674_03705; phage(gi100033)8.86e-59Showinfo_outline
23complement(3554078..3554779)PHAGE_Entero_DE3_NC_042057: DNA primase subunit; NCTC10674_03706; phage(gi100025)4.51e-168Showinfo_outline
24complement(3554776..3555780)PHAGE_Escher_PA28_NC_041935: hypothetical protein; NCTC10674_03707; phage(gi100031)1.89e-142Showinfo_outline
25complement(3555792..3556331)PHAGE_Entero_phi80_NC_021190: CII decision making protein; NCTC10674_03708; phage(gi824479625)9.37e-85Showinfo_outline
26complement(3556401..3556631)PHAGE_Escher_PA28_NC_041935: hypothetical protein; NCTC10674_03709; phage(gi100029)8.50e-24Showinfo_outline
273556736..3557425PHAGE_Salmon_BTP1_NC_042346: RegA; NCTC10674_03710; phage(gi100039)3.51e-123Showinfo_outline
283557655..3558035PHAGE_Pseudo_YMC11/07/P54_PAE_BP_NC_030909: recombination endonuclease subunit; NCTC10674_03711; phage(gi100052)2.16e-08Showinfo_outline
293558516..3558722PHAGE_Entero_HK225_NC_019717: Kil protein; NCTC10674_03712; phage(gi428782413)7.61e-36Showinfo_outline
303558798..3559178PHAGE_Entero_933W_NC_000924: host-nuclease inhibitor protein Gam; NCTC10674_03713; phage(gi9632481)7.46e-39Showinfo_outline
313559175..3559855PHAGE_Entero_YYZ_2008_NC_011356: putative exonuclease; NCTC10674_03714; phage(gi209427739)1.60e-169Showinfo_outline
323559852..3560034PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC10674_03715; phage(gi100011)4.01e-37Showinfo_outline
333560007..3560192PHAGE_Stx2_c_1717_NC_011357: hypothetical protein; NCTC10674_03716; phage(gi209447135)1.15e-23Showinfo_outline
343560170..3560448PHAGE_Entero_SfI_NC_027339: hypothetical protein; NCTC10674_03717; phage(gi849250253)1.41e-62Showinfo_outline
353560368..3560382attR0.0Showinfo_outline
363560647..3561810PHAGE_Shigel_Stx_NC_029120: integrase; NCTC10674_03718; phage(gi985761248)0.0Showinfo_outline

Region 11, total 28 CDS

#CDS PositionBLAST HitE-ValueSequence
13819740..3819752attL0.0Showinfo_outline
2complement(3831048..3831554)PHAGE_Entero_mEp460_NC_019716: Lom protein; NCTC10674_03971; phage(gi428782335)3.23e-80Showinfo_outline
3complement(3831625..3832599)PHAGE_Entero_mEp460_NC_019716: host specificity protein; NCTC10674_03972; phage(gi428782334)2.17e-156Showinfo_outline
4complement(3832869..3833414)PHAGE_Entero_DE3_NC_042057: RecA-like recombination protein; NCTC10674_03973; phage(gi100035)1.13e-129Showinfo_outline
53833827..3834894Uncharacterised protein; NCTC10674_039740.0Showinfo_outline
6complement(3834836..3835456)PHAGE_Entero_P4_NC_001609: hypothetical protein; NCTC10674_03975; phage(gi9627510)8.47e-14Showinfo_outline
7complement(3835873..3836331)PHAGE_Entero_mEp235_NC_019708: lysis protein Rz; NCTC10674_03976; phage(gi428781868)5.22e-99Showinfo_outline
8complement(3836328..3836825)PHAGE_Entero_cdtI_NC_009514: lysin; NCTC10674_03977; phage(gi148609440)1.71e-116Showinfo_outline
9complement(3836825..3837040)PHAGE_Entero_mEp460_NC_019716: porin; NCTC10674_03978; phage(gi428782370)4.41e-45Showinfo_outline
10complement(3837108..3838160)PHAGE_Entero_mEp460_NC_019716: DNA methylase; NCTC10674_03979; phage(gi428782369)0.0Showinfo_outline
11complement(3838310..3838504)PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC10674_03980; phage(gi428782368)8.02e-10Showinfo_outline
123838776..3840107putative KAP-NTPase protein; NCTC10674_039810.0Showinfo_outline
13complement(3840136..3840501)PHAGE_Entero_cdtI_NC_009514: antitermination protein Q; NCTC10674_03982; phage(gi148609434)3.15e-72Showinfo_outline
14complement(3840519..3841508)PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC10674_03983; phage(gi428782365)0.0Showinfo_outline
15complement(3841516..3842325)PHAGE_Entero_SfV_NC_003444: hypothetical protein; NCTC10674_03984; phage(gi19549031)0.0Showinfo_outline
16complement(3842345..3842761)PHAGE_Entero_mEp460_NC_019716: holliday junction resolvase; NCTC10674_03985; phage(gi428782363)5.34e-37Showinfo_outline
17complement(3842771..3843109)PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; NCTC10674_03986; phage(gi557307566)1.04e-77Showinfo_outline
18complement(3843106..3843663)PHAGE_Entero_mEp460_NC_019716: hypothetical protein; e14; phage prophage; NCTC10674_03987(gi428782356)2.22e-120Showinfo_outline
19complement(3843656..3843916)PHAGE_Entero_mEp460_NC_019716: putative antirepressor Cro; NCTC10674_03988; phage(gi428782355)1.13e-55Showinfo_outline
203844059..3844706PHAGE_Entero_mEp460_NC_019716: prophage repressor; NCTC10674_03989; phage(gi428782354)8.58e-150Showinfo_outline
21complement(3845026..3845541)PHAGE_Salmon_HK620_NC_002730: hypothetical protein; NCTC10674_03990; phage(gi13559839)1.42e-15Showinfo_outline
223846012..3846374PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC10674_03991; phage(gi428782351)2.40e-83Showinfo_outline
233846440..3847264PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC10674_03992; phage(gi428782350)0.0Showinfo_outline
243847392..3847928PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC10674_03993; phage(gi428782349)1.10e-129Showinfo_outline
253847919..3848281PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC10674_03994; phage(gi428782348)4.67e-82Showinfo_outline
263848281..3848586PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC10674_03995; phage(gi428782343)3.90e-25Showinfo_outline
273848734..3848746attR0.0Showinfo_outline
283848813..3849976PHAGE_Shigel_SfIV_NC_022749: integrase; NCTC10674_03996; phage(gi557307554)0.0Showinfo_outline
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Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)

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Length: 4769126 bps
Phages: 11
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Lysis
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Fiber Protein
Plate Protein
tRNA

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