Submission Results

Sequence Name: Not Available

GenBank Accession Number: UGFG01000001.1

GenInfo (GI) Number: 0000000000

Download Results: UGFG01000001.1.PHASTER.zip

gi|00000000|ref|UGFG01000001.1| Escherichia coli strain NCTC8500 genome assembly, contig: 4656470, gc%: 50.70%

Download summary as .txt file: summary.txt file_download

Total: 6 prophage regions have been identified, of which 1 regions are intact, 4 regions are incomplete, and 1 regions are questionable.

RegionRegion LengthCompletenessScore# Total ProteinsRegion PositionMost Common PhageGC %Details
145.6Kbincomplete60311029549-1075243 info_outlinePHAGE_Bacter_APSE_2_NC_011551(7)50.42%Show info_outline
223Kbquestionable90261276323-1299371 info_outlinePHAGE_Entero_Sf101_NC_027398(9)46.28%Show info_outline
318.2Kbincomplete30202122076-2140279 info_outlinePHAGE_Entero_mEp460_NC_019716(5)45.85%Show info_outline
428Kbincomplete50232784894-2812972 info_outlinePHAGE_Bacill_G_NC_023719(4)51.87%Show info_outline
524.1Kbintact100352925162-2949279 info_outlinePHAGE_Entero_lambda_NC_001416(15)45.26%Show info_outline
66.8Kbincomplete3084638887-4645708 info_outlinePHAGE_Bacill_G_NC_023719(2)49.16%Show info_outline
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Region: The number assigned to the region.
Region Length: The length of the sequence of that region (in bp).
Completeness: A prediction of whether the region contains a intact or incomplete prophage based on the above criteria.
Score: The score of the region based on the above criteria.
# Total Proteins: The number of ORFs present in the region.
Region Position: The start and end positions of the region on the bacterial chromosome.
Most Common Phage: The phage(s) with the highest number of proteins most similar to those in the region.
GC %: The percentage of GC nucleotides of the region.

Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:

  1. If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
Method 2:
  1. If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
Method 3:
  1. If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
  2. If the size of the region is greater than 30 Kb, the score will be increased by 10.
  3. If there are at least 40 proteins in the region, the score will be increased by 10.
  4. If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
Compared the total score of method 2 with the total score of method 3, the bigger one is chosen as the total score of the region.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.

gi|00000000|ref|UGFG01000001.1| Escherichia coli strain NCTC8500 genome assembly, contig: 4656470, gc%: 50.70%

Download details as .txt file: detail.txt file_download

Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File

Region 1, total 33 CDS

#CDS PositionBLAST HitE-ValueSequence
11029549..1029583attL0.0Showinfo_outline
21044490..1045887integrase; NCTC8500_013700.0Showinfo_outline
3complement(1045884..1046084)Uncharacterised protein; NCTC8500_013710.0Showinfo_outline
4complement(1046081..1047478)PHAGE_Bacter_APSE_2_NC_011551: DEAD box helicase; NCTC8500_01372; phage(gi212499736)0.0Showinfo_outline
51047546..1048424PHAGE_Lactob_A2_NC_004112: hypothetical protein; NCTC8500_01373; phage(gi22296541)6.89e-15Showinfo_outline
61048448..1048696Uncharacterised protein; NCTC8500_013740.0Showinfo_outline
71048650..1049219Uncharacterised protein; NCTC8500_013750.0Showinfo_outline
8complement(1049224..1049493)PHAGE_Bacter_APSE_2_NC_011551: hypothetical protein; NCTC8500_01376; phage(gi212499740)1.42e-33Showinfo_outline
9complement(1049483..1049782)PHAGE_Klebsi_phiKO2_NC_005857: Gp58; NCTC8500_01377; phage(gi46402144)4.02e-33Showinfo_outline
10complement(1049779..1049994)Uncharacterised protein; NCTC8500_013780.0Showinfo_outline
11complement(1050118..1051452)PHAGE_Bacter_APSE_2_NC_011551: DNA polymerase; NCTC8500_01379; phage(gi212499741)0.0Showinfo_outline
12complement(1051481..1052065)PHAGE_Bacter_APSE_2_NC_011551: DNA polymerase; NCTC8500_01380; phage(gi212499741)3.56e-63Showinfo_outline
131052112..1052741putative transmembrane protein; NCTC8500_013810.0Showinfo_outline
14complement(1052794..1053342)PHAGE_Bacter_APSE_2_NC_011551: hypothetical protein; NCTC8500_01382; phage(gi212499744)9.62e-62Showinfo_outline
15complement(1053404..1053883)PHAGE_Bacter_APSE_2_NC_011551: hypothetical protein; NCTC8500_01383; phage(gi212499745)2.36e-45Showinfo_outline
161054474..1054683PHAGE_Bacter_APSE_2_NC_011551: predicted P-loop ATPase; NCTC8500_01384; phage(gi212499708)3.12e-20Showinfo_outline
171054683..1054889PHAGE_Bacter_APSE_2_NC_011551: predicted P-loop ATPase; NCTC8500_01385; phage(gi212499708)2.24e-11Showinfo_outline
181055179..1055613PHAGE_Bacter_APSE_2_NC_011551: Q protein; NCTC8500_01386; phage(gi212499710)3.10e-55Showinfo_outline
191056016..1056183PHAGE_Entero_SfV_NC_003444: holin; NCTC8500_01387; phage(gi19549036)3.26e-25Showinfo_outline
201056234..1056461PHAGE_Iodoba_phiPLPE_NC_011142: gp27 putative head protein; NCTC8500_01388; phage(gi197085641)1.79e-07Showinfo_outline
211056418..1056813PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC8500_01389; phage(gi966201422)1.63e-46Showinfo_outline
221056833..1057075PHAGE_Entero_HK106_NC_019768: tail fiber assembly protein; NCTC8500_01390; phage(gi428783304)5.16e-47Showinfo_outline
23complement(1057047..1057487)PHAGE_Escher_pro483_NC_028943: tail fiber assembly protein; NCTC8500_01391; phage(gi971758532)2.00e-67Showinfo_outline
241057929..1058282PHAGE_Escher_P2_NC_041848: hypothetical protein; NCTC8500_01392; phage(gi100038)2.90e-71Showinfo_outline
25complement(1058562..1058981)Uncharacterised protein; NCTC8500_013930.0Showinfo_outline
26complement(1058978..1059208)Uncharacterised protein; NCTC8500_013940.0Showinfo_outline
27complement(1059269..1059535)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC8500_01395; phage(gi966201448)2.40e-47Showinfo_outline
281059610..1059741Uncharacterised protein; NCTC8500_013960.0Showinfo_outline
29complement(1059778..1060695)RpiR-family transcriptional regulator; NCTC8500_013970.0Showinfo_outline
301060904..1061539HAD hydrolase YfhB; NCTC8500_013980.0Showinfo_outline
311061597..1062100PHAGE_Achrom_83_24_NC_028834: tRNA-specific adenosine deaminase; NCTC8500_01399; phage(gi971747971)3.25e-07Showinfo_outline
32complement(1062097..1063653)PHAGE_Bacill_BM5_NC_029069: hypothetical protein; NCTC8500_01400; phage(gi985757795)2.78e-11Showinfo_outline
331075243..1075277attR0.0Showinfo_outline

Region 2, total 29 CDS

#CDS PositionBLAST HitE-ValueSequence
11276323..1276334attL0.0Showinfo_outline
21276358..1276828PHAGE_Burkho_phi1026b_NC_005284: gp58; NCTC8500_01654; phage(gi38707948)4.22e-11Showinfo_outline
31276812..1277294DNA-binding transcriptional regulator DsdC; NCTC8500_016550.0Showinfo_outline
4complement(1277478..1277678)PHAGE_Entero_HK633_NC_019719: hypothetical protein; NCTC8500_01656; phage(gi428782548)5.50e-44Showinfo_outline
5complement(1277736..1277903)PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC8500_01657; phage(gi100006)1.33e-34Showinfo_outline
61278579..1278902PHAGE_Entero_IME10_NC_019501: holin; NCTC8500_01658; phage(gi422934276)3.76e-72Showinfo_outline
71278886..1279362PHAGE_Entero_c_1_NC_019706: lysozyme; NCTC8500_01659; phage(gi428781798)1.30e-115Showinfo_outline
81279359..1279517PHAGE_Salmon_SEN22_NC_028696: outer membrane lytic protein Rz; DLP12; phage prophage; NCTC8500_01660(gi966201367)2.11e-23Showinfo_outline
91279635..1279883PHAGE_Entero_Sf101_NC_027398: terminase large subunit; NCTC8500_01661; phage(gi849122264)3.59e-54Showinfo_outline
101279885..1280505PHAGE_Entero_Sf101_NC_027398: portal protein; NCTC8500_01662; phage(gi849122265)5.98e-107Showinfo_outline
111280502..1280780PHAGE_Entero_IME10_NC_019501: DNA transfer protein; NCTC8500_01663; phage(gi422934288)1.03e-52Showinfo_outline
121280790..1282121PHAGE_Entero_IME10_NC_019501: gp20; NCTC8500_01664; phage(gi422934289)0.0Showinfo_outline
131282122..1284500PHAGE_Entero_Sf101_NC_027398: transglycosylase; NCTC8500_01665; phage(gi849122275)0.0Showinfo_outline
141284514..1285536PROPHAGE_Escher_CFT073: transposase; NCTC8500_01666; phage(gi26248360)0.0Showinfo_outline
151285536..1286315PROPHAGE_Escher_CFT073: transposase/IS protein; NCTC8500_01667; phage(gi26248359)0.0Showinfo_outline
161286331..1286816PHAGE_Entero_Sf101_NC_027398: transglycosylase; NCTC8500_01668; phage(gi849122275)6.42e-93Showinfo_outline
17complement(1286834..1287094)PHAGE_Entero_Sf101_NC_027398: putative chromosome segregation ATPase; NCTC8500_01669; phage(gi849122276)6.48e-55Showinfo_outline
181287216..1287743PHAGE_Entero_Sf101_NC_027398: bifunctional tail protein; NCTC8500_01670; phage(gi849122277)8.52e-73Showinfo_outline
191287994..1289037PHAGE_Salmon_STML_13_1_NC_042061: hypothetical protein; NCTC8500_01671; phage(gi100128)6.64e-157Showinfo_outline
20complement(1289082..1289477)Uncharacterised protein; NCTC8500_016720.0Showinfo_outline
21complement(1289893..1290717)PHAGE_Salmon_epsilon34_NC_011976: GtrC; putative membrane protein; NCTC8500_01673; phage(gi221328637)6.84e-39Showinfo_outline
22complement(1290714..1291646)PHAGE_Shigel_SfIV_NC_022749: bactoprenol glucosyltransferase; CPS-53; phage (KpLE1) prophage; NCTC8500_01674(gi557307552)0.0Showinfo_outline
23complement(1291643..1292005)PHAGE_Entero_SfV_NC_003444: putative flippase; NCTC8500_01675; phage(gi19549013)7.87e-76Showinfo_outline
24complement(1292157..1292516)PHAGE_Entero_IME10_NC_019501: integrase; NCTC8500_01676; phage(gi422934296)8.67e-81Showinfo_outline
25complement(1292492..1293313)PHAGE_Entero_IME10_NC_019501: integrase; NCTC8500_01677; phage(gi422934296)0.0Showinfo_outline
26complement(1293475..1293549)tRNA0.0Showinfo_outline
27complement(1293625..1293903)PHAGE_Entero_VT2phi_272_NC_028656: hypothetical protein; NCTC8500_01679; phage(gi966197797)5.06e-61Showinfo_outline
28complement(1293878..1294558)PHAGE_Entero_VT2phi_272_NC_028656: hypothetical protein; NCTC8500_01680; phage(gi966197797)5.14e-118Showinfo_outline
291299371..1299382attR0.0Showinfo_outline

Region 3, total 20 CDS

#CDS PositionBLAST HitE-ValueSequence
1complement(2122076..2122327)Qin prophage protein; NCTC8500_027580.0Showinfo_outline
22122861..2123100antitoxin of the RelE-RelB toxin-antitoxin system and transcriptional repressor of relBEF; NCTC8500_027590.0Showinfo_outline
32123100..2123387toxin of the RelE-RelB toxin-antitoxin system; NCTC8500_027600.0Showinfo_outline
42123459..2123614PHAGE_Entero_933W_NC_000924: host killer protein; NCTC8500_02761; phage(gi9632541)1.17e-25Showinfo_outline
52123831..2124181putative prophage protein; NCTC8500_027620.0Showinfo_outline
62124430..2125479PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC8500_02763; phage(gi428782365)3.52e-138Showinfo_outline
72125574..2125954PHAGE_Entero_mEp460_NC_019716: late gene regulator; NCTC8500_02764; phage(gi428782366)1.48e-40Showinfo_outline
8complement(2126361..2126573)cold shock-like protein CspF; NCTC8500_027650.0Showinfo_outline
9complement(2127693..2127812)Uncharacterised protein; NCTC8500_027670.0Showinfo_outline
102127854..2128060PHAGE_Entero_mEp460_NC_019716: porin; NCTC8500_02768; phage(gi428782370)2.64e-40Showinfo_outline
112128065..2128271PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC8500_02769; phage(gi428782371)2.38e-10Showinfo_outline
122129095..2129349putative Rz1-like lipoprotein, Qin prophage; NCTC8500_027700.0Showinfo_outline
132130204..2130476Qin prophage protein; NCTC8500_027720.0Showinfo_outline
142130648..2130821GnsA/GnsB family transcriptional regulator; NCTC8500_027730.0Showinfo_outline
15complement(2130973..2131383)PHAGE_Entero_lambda_NC_001416: putative envelope protein; NCTC8500_02774; phage(gi19263396)1.04e-75Showinfo_outline
162132063..2132608PHAGE_Entero_DE3_NC_042057: RecA-like recombination protein; NCTC8500_02775; phage(gi100035)2.62e-129Showinfo_outline
172132583..2133215PHAGE_Entero_mEp460_NC_019716: Lom protein; NCTC8500_02776; phage(gi428782335)3.09e-85Showinfo_outline
182133280..2136387PHAGE_Entero_9g_NC_024146: side tail fiber; NCTC8500_02777; phage(gi640885143)5.38e-155Showinfo_outline
19complement(2137060..2137650)PHAGE_Entero_Mu_NC_000929: Gin; NCTC8500_02779; phage(gi9633542)2.03e-30Showinfo_outline
202138987..2140279PHAGE_Burkho_phi1026b_NC_005284: gp59; NCTC8500_02780; phage(gi38707949)8.22e-28Showinfo_outline

Region 4, total 24 CDS

#CDS PositionBLAST HitE-ValueSequence
12784894..2786168PROPHAGE_Escher_MG1655: IS186 transposase; NCTC8500_03596; phage(gi90111427)0.0Showinfo_outline
2complement(2786200..2787063)PHAGE_Escher_RCS47_NC_042128: hypothetical protein; NCTC8500_03597; phage(gi100134)1.16e-18Showinfo_outline
3complement(2787065..2787682)PHAGE_Escher_RCS47_NC_042128: hypothetical protein; NCTC8500_03598; phage(gi100133)5.30e-91Showinfo_outline
4complement(2787693..2788361)PHAGE_Escher_RCS47_NC_042128: hypothetical protein; NCTC8500_03599; phage(gi100132)1.60e-63Showinfo_outline
5complement(2788399..2790138)PHAGE_Escher_RCS47_NC_042128: hypothetical protein; NCTC8500_03600; phage(gi100132)0.0Showinfo_outline
6complement(2790378..2791670)PHAGE_Bacill_G_NC_023719: gp287; NCTC8500_03602; phage(gi593777743)3.28e-09Showinfo_outline
7complement(2791761..2792444)PHAGE_Bacill_G_NC_023719: gp70; NCTC8500_03603; phage(gi593777538)3.99e-36Showinfo_outline
8complement(2792468..2793103)PHAGE_Bacill_G_NC_023719: gp70; NCTC8500_03604; phage(gi593777538)1.77e-53Showinfo_outline
9complement(2793114..2793725)outer-membrane lipoprotein carrier protein; NCTC8500_036050.0Showinfo_outline
10complement(2793884..2797873)PHAGE_Mycoba_Courthouse_NC_023690: gp201; NCTC8500_03606; phage(gi593774477)3.28e-100Showinfo_outline
11complement(2798008..2798502)leucine-responsive transcriptional regulator; NCTC8500_036070.0Showinfo_outline
122799047..2800012PHAGE_Bacill_G_NC_023719: gp344; NCTC8500_03608; phage(gi593777800)5.74e-68Showinfo_outline
132800391..2801902PHAGE_Bacill_SPbeta_NC_001884: ABC transporter; NCTC8500_03609; phage(gi9630145)5.61e-19Showinfo_outline
142801903..2803624PHAGE_Bacill_SPbeta_NC_001884: ABC transporter; NCTC8500_03610; phage(gi9630145)8.06e-18Showinfo_outline
152803666..2804370leucyl/phenylalanyl-tRNA-protein transferase; NCTC8500_036110.0Showinfo_outline
162804655..2804873translation initiation factor IF-1; NCTC8500_036120.0Showinfo_outline
172805127..2805214tRNA0.0Showinfo_outline
18complement(2805625..2807682)PHAGE_Agroba_Atu_ph07_NC_042013: putative virion structural protein; NCTC8500_03615; phage(gi100292)0.0Showinfo_outline
19complement(2807648..2807836)PROPHAGE_Escher_EDL933: ATP-dependent Clp protease ATP-binding subunit; NCTC8500_03616; phage(gi15800640)1.01e-30Showinfo_outline
20complement(2807867..2808187)PHAGE_Pectob_CBB_NC_041878: putative major capsid protein; NCTC8500_03617; phage(gi100319)3.65e-08Showinfo_outline
212808510..2808734PHAGE_Lactoc_bIL312_NC_002671: Csp; NCTC8500_03618; phage(gi13095918)1.61e-18Showinfo_outline
22complement(2808807..2810753)PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; NCTC8500_03619; phage(gi371496158)1.55e-44Showinfo_outline
23complement(2810750..2811865)macrolide-specific efflux protein; NCTC8500_036200.0Showinfo_outline
242811980..2812972virulence protein; NCTC8500_036210.0Showinfo_outline

Region 5, total 37 CDS

#CDS PositionBLAST HitE-ValueSequence
12925162..2925176attL0.0Showinfo_outline
22925927..2927504PHAGE_Entero_lambda_NC_001416: ea59; NCTC8500_03754; phage(gi9626272)0.0Showinfo_outline
32927501..2928160PHAGE_Entero_lambda_NC_001416: ea31; NCTC8500_03755; phage(gi9626271)9.28e-151Showinfo_outline
42928983..2930215PHAGE_Entero_lambda_NC_001416: ea47; NCTC8500_03756; phage(gi9626270)0.0Showinfo_outline
5complement(2930938..2931852)PROPHAGE_Escher_MG1655: Qin prophage; predicted side tail fibre assembly protein; NCTC8500_03758; phage(gi16129506)3.44e-35Showinfo_outline
6complement(2932151..2932582)PHAGE_Entero_JenK1_NC_029021: tail fiber protein; NCTC8500_03759; phage(gi971766395)9.07e-60Showinfo_outline
72932889..2933824PHAGE_Entero_lambda_NC_001416: hypothetical protein; NCTC8500_03760; phage(gi9626267)2.18e-15Showinfo_outline
8complement(2933903..2934454)PHAGE_Entero_cdtI_NC_009514: putative Lom-like outer membrane protein; NCTC8500_03761; phage(gi148609401)9.01e-73Showinfo_outline
9complement(2934550..2935323)PHAGE_Entero_cdtI_NC_009514: putative tail tip assembly protein; NCTC8500_03762; phage(gi148609400)1.15e-171Showinfo_outline
10complement(2935310..2935660)PHAGE_Entero_lambda_NC_001416: DNA packaging protein; NCTC8500_03763; phage(gi9626245)1.05e-67Showinfo_outline
11complement(2935599..2936192)PHAGE_Entero_lambda_NC_001416: DNA packaging protein; NCTC8500_03764; phage(gi9626245)1.63e-140Showinfo_outline
12complement(2936167..2936712)PHAGE_Entero_lambda_NC_001416: DNA packaging protein; NCTC8500_03765; phage(gi9626244)2.62e-129Showinfo_outline
13complement(2937460..2937666)PHAGE_Entero_lambda_NC_001416: hypothetical protein; predicted; phage protein; NCTC8500_03766(gi19263397)6.10e-43Showinfo_outline
142937952..2938362PHAGE_Entero_lambda_NC_001416: putative envelope protein; NCTC8500_03767; phage(gi19263396)5.95e-96Showinfo_outline
152938653..2938946PHAGE_Entero_lambda_NC_001416: Bor protein precursor; NCTC8500_03768; phage(gi19263395)1.33e-65Showinfo_outline
16complement(2938978..2939439)PHAGE_Entero_lambda_NC_001416: cell lysis protein; NCTC8500_03769; phage(gi9626310)9.98e-106Showinfo_outline
17complement(2939436..2939933)PHAGE_Entero_SfI_NC_027339: lysozyme; NCTC8500_03770; phage(gi849250312)2.24e-117Showinfo_outline
18complement(2939933..2940148)PHAGE_Entero_VT2phi_272_NC_028656: holin; NCTC8500_03771; phage(gi966197762)6.76e-36Showinfo_outline
192940736..2940933outer membrane porin protein, N-ter fragment; NCTC8500_037720.0Showinfo_outline
202940881..2941819outer membrane porin protein NmpC; NCTC8500_037730.0Showinfo_outline
21complement(2942008..2942241)PHAGE_Shigel_Stx_NC_029120: antitermination protein Q; NCTC8500_03774; phage(gi985761278)6.23e-35Showinfo_outline
22complement(2942297..2942392)PHAGE_Entero_BP_4795_NC_004813: putative antitermination protein Q; NCTC8500_03775; phage(gi157166023)1.76e-14Showinfo_outline
23complement(2942617..2942979)PHAGE_Salmon_118970_sal4_NC_030919: membrane-associated initiation of head vertex; NCTC8500_03776; phage(gi100034)5.78e-38Showinfo_outline
242943226..2943696PHAGE_Stx2_c_1717_NC_011357: exonuclease; NCTC8500_03777; phage(gi209447136)1.13e-108Showinfo_outline
252943693..2943875PHAGE_Entero_lambda_NC_001416: hypothetical protein; NCTC8500_03778; phage(gi9626279)4.01e-37Showinfo_outline
262943848..2944039PHAGE_Entero_lambda_NC_001416: hypothetical protein; NCTC8500_03779; phage(gi9626278)8.03e-36Showinfo_outline
272944050..2944331PHAGE_Entero_933W_NC_000924: hypothetical protein; NCTC8500_03780; phage(gi9632476)4.08e-62Showinfo_outline
282944430..2944651PHAGE_Escher_PA28_NC_041935: hypothetical protein; NCTC8500_03781; phage(gi100016)1.14e-45Showinfo_outline
292944648..2945199PHAGE_Entero_HK140_NC_019710: hypothetical protein; NCTC8500_03782; phage(gi428781974)6.16e-77Showinfo_outline
302945402..2945683PHAGE_Entero_lambda_NC_001416: ea8.5; NCTC8500_03783; phage(gi9626275)1.35e-64Showinfo_outline
312945772..2945939PHAGE_Entero_lambda_NC_001416: hypothetical protein; NCTC8500_03784; phage(gi19263393)4.54e-34Showinfo_outline
322946175..2946825PHAGE_Entero_lambda_NC_001416: integration protein; NCTC8500_03785; phage(gi9626273)7.73e-142Showinfo_outline
33complement(2946835..2947251)PROPHAGE_Escher_CFT073: transposase/IS protein; NCTC8500_03786; phage(gi26248359)2.90e-96Showinfo_outline
34complement(2947241..2947615)PROPHAGE_Escher_CFT073: transposase/IS protein; NCTC8500_03787; phage(gi26248359)5.07e-77Showinfo_outline
35complement(2947615..2948637)PROPHAGE_Escher_CFT073: transposase; NCTC8500_03788; phage(gi26248360)0.0Showinfo_outline
362948696..2949205PHAGE_Entero_lambda_NC_001416: integration protein; NCTC8500_03789; phage(gi9626273)3.51e-112Showinfo_outline
372949279..2949293attR0.0Showinfo_outline

Region 6, total 8 CDS

#CDS PositionBLAST HitE-ValueSequence
1complement(4638887..4639666)PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; NCTC8500_05897; phage(gi557307613)5.74e-72Showinfo_outline
2complement(4639666..4640409)PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; NCTC8500_05898; phage(gi557307612)2.30e-19Showinfo_outline
3complement(4640448..4640687)PROPHAGE_Escher_CFT073: transposase; NCTC8500_05899; phage(gi26248360)2.74e-23Showinfo_outline
44641655..4641807PHAGE_Escher_P13374_NC_018846: prophage host toxic membrane protein; NCTC8500_05900; phage(gi410491667)1.57e-05Showinfo_outline
5complement(4642487..4642777)PHAGE_Burkho_BcepC6B_NC_005887: putative prophage repressor protein; NCTC8500_05902; phage(gi48697234)9.74e-06Showinfo_outline
64643211..4643921putative lipoprotein; NCTC8500_059030.0Showinfo_outline
7complement(4643971..4644945)2-ketoaldonate reductase/glyoxylate reductase B; NCTC8500_059040.0Showinfo_outline
8complement(4645049..4645708)PHAGE_Bacill_G_NC_023719: gp249; NCTC8500_05905; phage(gi593777705)1.87e-09Showinfo_outline
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Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)

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Length: 4656470 bps
Phages: 6
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Lysis
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Fiber Protein
Plate Protein
tRNA

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