Submission Results

Sequence Name: Not Available

GenBank Accession Number: UGGL01000002.1

GenInfo (GI) Number: 0000000000

Download Results: UGGL01000002.1.PHASTER.zip

gi|00000000|ref|UGGL01000002.1| Pseudescherichia vulneris strain NCTC12130 genome assembly, 4427509, gc%: 56.40%

Download summary as .txt file: summary.txt file_download

Total: 7 prophage regions have been identified, of which 4 regions are intact, 2 regions are incomplete, and 1 regions are questionable.

RegionRegion LengthCompletenessScore# Total ProteinsRegion PositionMost Common PhageGC %Details
118.6Kbquestionable70281576917-1595532 info_outlinePHAGE_Salmon_SEN34_NC_028699(13)55.36%Show info_outline
254.7Kbintact150662016082-2070795 info_outlinePHAGE_Escher_HK639_NC_016158(21)55.13%Show info_outline
358.2Kbintact140602391248-2449499 info_outlinePHAGE_Escher_HK639_NC_016158(17)54.45%Show info_outline
441.4Kbintact150532769109-2810574 info_outlinePHAGE_Entero_HK140_NC_019710(13)54.24%Show info_outline
556.5Kbintact100623215948-3272492 info_outlinePHAGE_Escher_phiV10_NC_007804(30)54.37%Show info_outline
614.1Kbincomplete50203336510-3350666 info_outlinePHAGE_Salmon_SEN34_NC_028699(14)51.05%Show info_outline
730.6Kbincomplete50273426365-3457049 info_outlinePHAGE_Bacill_phiNIT1_NC_021856(2)49.52%Show info_outline
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Region: The number assigned to the region.
Region Length: The length of the sequence of that region (in bp).
Completeness: A prediction of whether the region contains a intact or incomplete prophage based on the above criteria.
Score: The score of the region based on the above criteria.
# Total Proteins: The number of ORFs present in the region.
Region Position: The start and end positions of the region on the bacterial chromosome.
Most Common Phage: The phage(s) with the highest number of proteins most similar to those in the region.
GC %: The percentage of GC nucleotides of the region.

Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:

  1. If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
Method 2:
  1. If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
Method 3:
  1. If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
  2. If the size of the region is greater than 30 Kb, the score will be increased by 10.
  3. If there are at least 40 proteins in the region, the score will be increased by 10.
  4. If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
Compared the total score of method 2 with the total score of method 3, the bigger one is chosen as the total score of the region.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.

gi|00000000|ref|UGGL01000002.1| Pseudescherichia vulneris strain NCTC12130 genome assembly, 4427509, gc%: 56.40%

Download details as .txt file: detail.txt file_download

Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File

Region 1, total 28 CDS

#CDS PositionBLAST HitE-ValueSequence
11576917..1577456PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC12130_01637; phage(gi428782339)2.55e-95Showinfo_outline
21577882..1578469Uncharacterised protein; NCTC12130_016380.0Showinfo_outline
31578488..1578625Uncharacterised protein; NCTC12130_016390.0Showinfo_outline
4complement(1578714..1579169)PHAGE_Cronob_ENT39118_NC_019934: phage repressor protein; NCTC12130_01640; phage(gi431811060)5.26e-11Showinfo_outline
51579379..1580047PHAGE_Pectob_ZF40_NC_019522: putative replication protein; NCTC12130_01641; phage(gi422936654)6.82e-62Showinfo_outline
61580044..1580559PHAGE_Entero_ST104_NC_005841: gp12; NCTC12130_01642; phage(gi46358676)1.18e-19Showinfo_outline
71580594..1580830PHAGE_Salmon_118970_sal4_NC_030919: DCTP pyrophosphatase; NCTC12130_01643; phage(gi100024)4.18e-24Showinfo_outline
81580817..1581434PHAGE_Salmon_118970_sal4_NC_030919: DNA primase subunit; NCTC12130_01644; phage(gi100025)2.64e-61Showinfo_outline
91581474..1581959PHAGE_Pectob_ZF40_NC_019522: hypothetical protein; NCTC12130_01645; phage(gi422936656)8.06e-27Showinfo_outline
101582195..1582386PHAGE_Salmon_Fels_1_NC_010391: hypothetical protein; NCTC12130_01646; phage(gi169257165)9.20e-05Showinfo_outline
111582597..1583175PHAGE_Salmon_vB_SosS_Oslo_NC_018279: antitermination protein Q; NCTC12130_01647; phage(gi399528832)3.04e-05Showinfo_outline
121583693..1584220PHAGE_Cronob_phiES15_NC_018454: putative endolysin; NCTC12130_01648; phage(gi401817587)2.36e-58Showinfo_outline
131584217..1584597PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; NCTC12130_01649; phage(gi100132)2.61e-25Showinfo_outline
141584760..1585305PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC12130_01650; phage(gi966201429)2.79e-44Showinfo_outline
151585309..1586454PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC12130_01651; phage(gi966201430)0.0Showinfo_outline
161586466..1586906PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC12130_01652; phage(gi966201431)3.40e-68Showinfo_outline
171586910..1587362PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC12130_01653; phage(gi966201432)9.16e-72Showinfo_outline
181587540..1587764PHAGE_Salmon_SEN34_NC_028699: tail tape measure protein; NCTC12130_01654; phage(gi966201433)9.15e-11Showinfo_outline
191587800..1589194PHAGE_Salmon_SEN34_NC_028699: tail tape measure protein; NCTC12130_01655; phage(gi966201433)6.33e-151Showinfo_outline
201589369..1589758PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC12130_01656; phage(gi966201434)6.21e-50Showinfo_outline
211589755..1590057PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC12130_01657; phage(gi966201435)8.65e-47Showinfo_outline
221590063..1591025PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC12130_01658; phage(gi966201436)1.55e-122Showinfo_outline
231591092..1591847PHAGE_Salmon_SEN34_NC_028699: baseplate assembly protein; NCTC12130_01659; phage(gi966201439)2.08e-148Showinfo_outline
241591847..1592200PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC12130_01660; phage(gi966201441)3.69e-53Showinfo_outline
251592200..1593399PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC12130_01661; phage(gi966201442)0.0Showinfo_outline
261593396..1594076PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC12130_01662; phage(gi966201443)1.00e-129Showinfo_outline
271594076..1594924PHAGE_Salmon_SEN34_NC_028699: tail fiber protein; NCTC12130_01663; phage(gi966201444)2.57e-43Showinfo_outline
281594924..1595532PHAGE_Escher_pro483_NC_028943: putative tail fiber assembly protein; NCTC12130_01664; phage(gi971758533)1.62e-60Showinfo_outline

Region 2, total 68 CDS

#CDS PositionBLAST HitE-ValueSequence
1complement(2016082..2016831)PHAGE_Prochl_P_TIM68_NC_028955: hypothetical protein; NCTC12130_02122; phage(gi971760361)4.02e-10Showinfo_outline
22016915..2018306dipeptidyl carboxypeptidase II; NCTC12130_021230.0Showinfo_outline
32018278..2018871dipeptidyl carboxypeptidase II; NCTC12130_021240.0Showinfo_outline
42018980..2018994attL0.0Showinfo_outline
5complement(2019113..2020252)PHAGE_Entero_HK022_NC_002166: integrase; NCTC12130_02125; phage(gi9634144)6.74e-69Showinfo_outline
6complement(2020550..2020792)PHAGE_Entero_mEp237_NC_019704: hypothetical protein; NCTC12130_02126; phage(gi435439294)4.27e-26Showinfo_outline
7complement(2020789..2020965)PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC12130_02127; phage(gi356870636)1.05e-11Showinfo_outline
8complement(2021003..2021494)PHAGE_Entero_mEp237_NC_019704: recombinase RecT; NCTC12130_02128; phage(gi435439295)2.66e-63Showinfo_outline
9complement(2021491..2022087)PHAGE_Entero_Tyrion_NC_031077: RecA-like recombination protein; NCTC12130_02129; phage(gi100035)1.14e-79Showinfo_outline
10complement(2022100..2025831)PHAGE_Salmon_SPN3UB_NC_019545: RecE; NCTC12130_02130; phage(gi423262421)0.0Showinfo_outline
11complement(2025963..2026151)phage protein; NCTC12130_021310.0Showinfo_outline
12complement(2026151..2026411)Uncharacterised protein; NCTC12130_021320.0Showinfo_outline
13complement(2026716..2027825)PHAGE_Salmon_ST160_NC_014900: regulatory protein; NCTC12130_02133; phage(gi318065923)3.82e-64Showinfo_outline
14complement(2027976..2028623)PHAGE_Salmon_SEN34_NC_028699: putative DNA-binding protein; NCTC12130_02134; phage(gi966201460)8.27e-63Showinfo_outline
152028686..2029228PHAGE_Escher_HK639_NC_016158: cII; NCTC12130_02135; phage(gi356870652)1.86e-56Showinfo_outline
162029376..2030227PHAGE_Salmon_SPN3UB_NC_019545: PrpO; NCTC12130_02136; phage(gi423262427)2.43e-168Showinfo_outline
172030230..2030982PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA replication protein; NCTC12130_02137; phage(gi169257280)4.35e-156Showinfo_outline
182030990..2031361Uncharacterised protein; NCTC12130_021380.0Showinfo_outline
192031358..2031831PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC12130_02139; phage(gi431810523)1.77e-17Showinfo_outline
202031824..2032459PHAGE_Escher_RCS47_NC_042128: baseplate subunit; NCTC12130_02140; phage(gi100105)7.67e-68Showinfo_outline
212032456..2032857PHAGE_Shigel_Ss_VASD_NC_028685: hypothetical protein; NCTC12130_02141; phage(gi966200435)1.85e-14Showinfo_outline
222032857..2033114PHAGE_Salmon_118970_sal3_NC_031940: cytosine-specific methyltransferase; NCTC12130_02142; phage(gi100124)1.99e-13Showinfo_outline
232033111..2034979PHAGE_Pectob_ZF40_NC_019522: putative methylase; NCTC12130_02143; phage(gi422936661)0.0Showinfo_outline
242034979..2035218Uncharacterised protein; NCTC12130_021440.0Showinfo_outline
252035776..2036021PHAGE_Entero_mEp237_NC_019704: hypothetical protein; NCTC12130_02145; phage(gi435439314)9.95e-18Showinfo_outline
262036369..2036680PHAGE_Entero_mEp237_NC_019704: hypothetical protein; NCTC12130_02146; phage(gi435439315)3.19e-56Showinfo_outline
272036685..2036885PHAGE_Entero_mEp237_NC_019704: hypothetical protein; NCTC12130_02147; phage(gi435439316)2.51e-29Showinfo_outline
282036888..2037493PHAGE_Edward_GF_2_NC_026611: putative recombination endonuclease; NCTC12130_02148; phage(gi764162320)2.94e-69Showinfo_outline
292037490..2037630PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; small; phage protein; NCTC12130_02149(gi169257245)1.35e-20Showinfo_outline
302037627..2038328PHAGE_Entero_HK225_NC_019717: late gene regulator Q; NCTC12130_02150; phage(gi428782441)8.09e-115Showinfo_outline
312038708..2038923PHAGE_Entero_cdtI_NC_009514: lysis protein; NCTC12130_02151; phage(gi148609439)2.75e-38Showinfo_outline
322038923..2039459PHAGE_Entero_N15_NC_001901: gp54; Qin; phage prophage; NCTC12130_02152(gi9630497)4.38e-114Showinfo_outline
332039456..2039848PHAGE_Entero_SfV_NC_003444: putative Rz lytic protein; NCTC12130_02153; phage(gi19549038)7.82e-51Showinfo_outline
342040019..2040207PHAGE_Acinet_YMC11/11/R3177_NC_041866: thymidylate synthetase; NCTC12130_02154; phage(gi100061)2.84e-27Showinfo_outline
352040320..2040682membrane spanning protein TolA; NCTC12130_021550.0Showinfo_outline
362040911..2041147Uncharacterised protein; NCTC12130_021560.0Showinfo_outline
37complement(2041215..2041853)PHAGE_Shigel_Stx_NC_029120: hypothetical protein; NCTC12130_02157; phage(gi985761266)1.18e-58Showinfo_outline
382041887..2042459PHAGE_Cronob_phiES15_NC_018454: terminase small subunit; NCTC12130_02158; phage(gi401817591)5.83e-90Showinfo_outline
392042456..2043256PHAGE_Escher_HK639_NC_016158: terminase large subunit; NCTC12130_02159; phage(gi356870602)3.36e-171Showinfo_outline
402043498..2044028PHAGE_Escher_HK639_NC_016158: terminase large subunit; NCTC12130_02160; phage(gi356870602)6.01e-114Showinfo_outline
412044033..2045436PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC12130_02161; phage(gi356870603)0.0Showinfo_outline
422045438..2046544PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC12130_02162; phage(gi356870604)0.0Showinfo_outline
432046547..2046756Uncharacterised protein; NCTC12130_021630.0Showinfo_outline
442046769..2046951Uncharacterised protein; NCTC12130_021640.0Showinfo_outline
452046988..2047740PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC12130_02165; phage(gi356870605)5.81e-172Showinfo_outline
462047757..2048893PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC12130_02166; phage(gi356870606)0.0Showinfo_outline
472048931..2049248PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC12130_02167; phage(gi356870607)1.88e-24Showinfo_outline
482049251..2049733PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC12130_02168; phage(gi356870608)6.06e-100Showinfo_outline
492049735..2050088PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC12130_02169; phage(gi356870609)1.26e-73Showinfo_outline
502050091..2050690PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC12130_02170; phage(gi356870610)3.05e-130Showinfo_outline
512050680..2051126PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC12130_02171; phage(gi356870611)4.83e-89Showinfo_outline
522051173..2052105PHAGE_Escher_HK639_NC_016158: major tail protein; NCTC12130_02172; phage(gi356870612)0.0Showinfo_outline
532052398..2052910PHAGE_Salmon_SE1_NC_011802: hypothetical protein; NCTC12130_02173; phage(gi219681238)1.96e-83Showinfo_outline
542052950..2053288PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC12130_02174; phage(gi356870614)5.04e-74Showinfo_outline
552053306..2053593PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; NCTC12130_02175; phage(gi401817604)1.85e-24Showinfo_outline
562053593..2056898PHAGE_Escher_HK639_NC_016158: tail length tape measure protein; NCTC12130_02176; phage(gi356870615)0.0Showinfo_outline
572056919..2057482PHAGE_Entero_phi80_NC_021190: hypothetical protein; NCTC12130_02177; phage(gi824479600)5.49e-50Showinfo_outline
582057983..2058333PHAGE_Escher_HK639_NC_016158: minor tail protein; NCTC12130_02178; phage(gi356870619)1.77e-77Showinfo_outline
592058526..2059104PHAGE_Escher_HK639_NC_016158: minor tail protein L; NCTC12130_02179; phage(gi356870620)4.44e-117Showinfo_outline
602059114..2059845PHAGE_Escher_HK639_NC_016158: tail assembly protein K; NCTC12130_02180; phage(gi356870621)3.68e-168Showinfo_outline
612059833..2060429PHAGE_Escher_HK639_NC_016158: tail assembly protein; NCTC12130_02181; phage(gi356870622)1.16e-116Showinfo_outline
622060483..2064316PHAGE_Escher_HK639_NC_016158: host specificity protein; NCTC12130_02182; phage(gi356870623)0.0Showinfo_outline
632064316..2065284PHAGE_Pantoe_vB_PagS_Vid5_NC_042120: hypothetical protein; NCTC12130_02183; phage(gi100023)7.19e-58Showinfo_outline
642065355..2066599PHAGE_Entero_mEpX2_NC_019705: tail fiber; NCTC12130_02184; phage(gi428765638)2.50e-50Showinfo_outline
652067019..2068506PHAGE_Pseudo_phi3_NC_030940: protector from prophage-induced early lysis; NCTC12130_02186; phage(gi100001)3.81e-33Showinfo_outline
662068586..2069026PHAGE_Escher_HK639_NC_016158: UmuD; NCTC12130_02187; phage(gi356870628)4.19e-19Showinfo_outline
672069010..2070275PHAGE_Cronob_ENT39118_NC_019934: DNA polymerase; NCTC12130_02188; phage(gi431811050)0.0Showinfo_outline
682070795..2070809attR0.0Showinfo_outline

Region 3, total 62 CDS

#CDS PositionBLAST HitE-ValueSequence
12391248..2391259attL0.0Showinfo_outline
22394482..2395471PHAGE_Staphy_phiN315_NC_004740: probable ss-1,3-N-acetylglucosaminyltransferase; NCTC12130_02534; phage(gi30043988)1.39e-07Showinfo_outline
3complement(2395711..2396919)PHAGE_Entero_mEpX2_NC_019705: tail fiber; NCTC12130_02535; phage(gi428765638)5.52e-54Showinfo_outline
4complement(2396989..2397957)PHAGE_Pantoe_vB_PagS_Vid5_NC_042120: hypothetical protein; NCTC12130_02536; phage(gi100023)1.18e-54Showinfo_outline
5complement(2397957..2401790)PHAGE_Escher_HK639_NC_016158: host specificity protein; NCTC12130_02537; phage(gi356870623)0.0Showinfo_outline
6complement(2401933..2402346)PHAGE_Salmon_epsilon34_NC_011976: hypothetical protein; NCTC12130_02538; phage(gi221328633)8.46e-76Showinfo_outline
7complement(2402813..2403406)PHAGE_Escher_HK639_NC_016158: tail assembly protein; NCTC12130_02539; phage(gi356870622)1.18e-115Showinfo_outline
8complement(2403394..2404125)PHAGE_Escher_HK639_NC_016158: tail assembly protein K; NCTC12130_02540; phage(gi356870621)1.41e-164Showinfo_outline
9complement(2404135..2404905)PHAGE_Escher_HK639_NC_016158: minor tail protein L; NCTC12130_02541; phage(gi356870620)2.69e-168Showinfo_outline
10complement(2404905..2405255)PHAGE_Escher_HK639_NC_016158: minor tail protein; NCTC12130_02542; phage(gi356870619)4.33e-62Showinfo_outline
11complement(2405288..2408878)PHAGE_Entero_c_1_NC_019706: tail length tape measure protein; NCTC12130_02543; phage(gi428781748)2.12e-173Showinfo_outline
12complement(2408878..2409042)PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; NCTC12130_02544; phage(gi401817604)1.01e-20Showinfo_outline
13complement(2409189..2409500)PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC12130_02545; phage(gi356870614)7.37e-33Showinfo_outline
14complement(2409551..2410228)PHAGE_Cronob_phiES15_NC_018454: putative major tail protein; NCTC12130_02546; phage(gi401817602)7.55e-109Showinfo_outline
15complement(2410278..2410529)PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC12130_02547; phage(gi356870611)1.14e-13Showinfo_outline
16complement(2410659..2411267)PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC12130_02548; phage(gi356870610)1.82e-72Showinfo_outline
17complement(2411269..2411619)PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC12130_02549; phage(gi356870609)5.64e-31Showinfo_outline
18complement(2411595..2412104)PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC12130_02550; phage(gi356870608)1.03e-62Showinfo_outline
19complement(2412107..2412610)PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC12130_02551; phage(gi356870607)9.02e-07Showinfo_outline
20complement(2412650..2413786)PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC12130_02552; phage(gi356870606)0.0Showinfo_outline
21complement(2413875..2414627)PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC12130_02553; phage(gi356870605)7.91e-142Showinfo_outline
22complement(2414750..2415835)PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC12130_02554; phage(gi356870604)8.26e-137Showinfo_outline
23complement(2415819..2416925)PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC12130_02555; phage(gi356870603)0.0Showinfo_outline
24complement(2416936..2418540)PHAGE_Acinet_vB_AbaS_TRS1_NC_031098: hypothetical protein; NCTC12130_02556; phage(gi100002)1.74e-179Showinfo_outline
25complement(2418515..2419522)PHAGE_Pseudo_F116_NC_006552: terminase small subunit; NCTC12130_02557; phage(gi56692920)3.59e-49Showinfo_outline
262420533..2420928Uncharacterised protein; NCTC12130_025580.0Showinfo_outline
27complement(2420968..2421156)PHAGE_Acinet_YMC11/11/R3177_NC_041866: thymidylate synthetase; NCTC12130_02559; phage(gi100061)3.87e-25Showinfo_outline
282421316..2421741Uncharacterised protein; NCTC12130_025600.0Showinfo_outline
29complement(2421798..2422034)Uncharacterised protein; NCTC12130_025610.0Showinfo_outline
30complement(2422378..2422743)PHAGE_Escher_K1_dep(4)_NC_027993: putative spanin; NCTC12130_02562; phage(gi937456914)3.90e-19Showinfo_outline
31complement(2422733..2423236)PHAGE_Entero_phi80_NC_021190: lysozyme; NCTC12130_02563; phage(gi824479636)1.75e-63Showinfo_outline
32complement(2423237..2423476)PHAGE_Entero_phi80_NC_021190: holin; NCTC12130_02564; phage(gi824479635)3.39e-15Showinfo_outline
332423619..2423846Uncharacterised protein; NCTC12130_025650.0Showinfo_outline
34complement(2424013..2424660)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC12130_02566; phage(gi431810516)7.62e-61Showinfo_outline
35complement(2424962..2425624)PHAGE_Salmon_SPN3UB_NC_019545: NinG; NCTC12130_02567; phage(gi423262439)3.31e-66Showinfo_outline
36complement(2425600..2425800)PHAGE_Entero_mEp237_NC_019704: hypothetical protein; NCTC12130_02568; phage(gi435439316)1.13e-28Showinfo_outline
37complement(2425812..2426405)PHAGE_Entero_mEp237_NC_019704: hypothetical protein; NCTC12130_02569; phage(gi435439315)2.49e-124Showinfo_outline
38complement(2426915..2428402)PHAGE_Pseudo_phi3_NC_030940: protector from prophage-induced early lysis; NCTC12130_02570; phage(gi100001)3.81e-33Showinfo_outline
39complement(2428970..2430844)PHAGE_Pectob_ZF40_NC_019522: putative methylase; NCTC12130_02572; phage(gi422936661)0.0Showinfo_outline
40complement(2430841..2431116)PHAGE_Salmon_118970_sal3_NC_031940: cytosine-specific methyltransferase; NCTC12130_02573; phage(gi100124)5.57e-14Showinfo_outline
41complement(2431097..2431408)PHAGE_Shigel_Ss_VASD_NC_028685: hypothetical protein; NCTC12130_02574; phage(gi966200435)1.39e-15Showinfo_outline
42complement(2431405..2432274)Uncharacterised protein; NCTC12130_025750.0Showinfo_outline
43complement(2432271..2432885)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC12130_02576; phage(gi431810523)2.35e-12Showinfo_outline
44complement(2432882..2433256)Uncharacterised protein; NCTC12130_025770.0Showinfo_outline
45complement(2433259..2433993)PHAGE_Salmon_SEN34_NC_028699: replication protein P; NCTC12130_02578; phage(gi966201464)2.20e-97Showinfo_outline
46complement(2433993..2434841)PHAGE_Entero_mEp237_NC_019704: DNA replication protein O; NCTC12130_02579; phage(gi435439307)1.07e-127Showinfo_outline
47complement(2434986..2435522)PHAGE_Escher_HK639_NC_016158: cII; NCTC12130_02580; phage(gi356870652)1.54e-55Showinfo_outline
48complement(2435525..2435752)PHAGE_Phage_Gifsy_2_NC_010393: putative bacteriophage regulatory protein; Lambda gpCro analog; NCTC12130_02581; phage(gi169257277)2.63e-20Showinfo_outline
492436514..2436669Uncharacterised protein; NCTC12130_025820.0Showinfo_outline
502436669..2436866phage protein; NCTC12130_025830.0Showinfo_outline
512436877..2437041PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; zinc-binding; phage protein; NCTC12130_02584(gi169257260)1.66e-19Showinfo_outline
522437178..2437948PHAGE_Entero_HK225_NC_019717: RecE; NCTC12130_02585; phage(gi428782410)3.45e-67Showinfo_outline
532437938..2439113PHAGE_Salmon_SPN3UB_NC_019545: RecE; NCTC12130_02586; phage(gi423262421)2.90e-59Showinfo_outline
542439230..2440900PHAGE_Salmon_SPN3UB_NC_019545: RecE; NCTC12130_02587; phage(gi423262421)0.0Showinfo_outline
552440913..2442004PHAGE_Entero_mEp237_NC_019704: recombinase RecT; NCTC12130_02588; phage(gi435439295)4.86e-134Showinfo_outline
562442042..2442218PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC12130_02589; phage(gi356870636)6.30e-13Showinfo_outline
572442215..2442457PHAGE_Entero_mEp237_NC_019704: hypothetical protein; NCTC12130_02590; phage(gi435439294)4.76e-28Showinfo_outline
582442522..2442734PHAGE_Escher_phi191_NC_028660: hypothetical protein; NCTC12130_02591; phage(gi966198069)8.96e-06Showinfo_outline
592442736..2443974PROPHAGE_Escher_Sakai: putative integrase; NCTC12130_02592; phage(gi15832267)1.92e-114Showinfo_outline
602444023..2444958C32 tRNA thiolase; NCTC12130_025930.0Showinfo_outline
61complement(2445016..2446389)PHAGE_Entero_CAjan_NC_028776: helicase-like protein; NCTC12130_02594; phage(gi971742387)1.19e-06Showinfo_outline
622449499..2449510attR0.0Showinfo_outline

Region 4, total 55 CDS

#CDS PositionBLAST HitE-ValueSequence
12769109..2769188attL0.0Showinfo_outline
2complement(2769818..2770123)PHAGE_Entero_mEp390_NC_019721: hypothetical protein; NCTC12130_02952; phage(gi428782690)9.15e-31Showinfo_outline
3complement(2770123..2770362)PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; NCTC12130_02953; phage(gi401817614)2.77e-17Showinfo_outline
4complement(2770440..2771684)PHAGE_Entero_mEpX2_NC_019705: tail fiber; NCTC12130_02954; phage(gi428765638)2.90e-49Showinfo_outline
5complement(2771754..2772722)PHAGE_Pantoe_vB_PagS_Vid5_NC_042120: hypothetical protein; NCTC12130_02955; phage(gi100023)1.11e-56Showinfo_outline
6complement(2772722..2776528)PHAGE_Entero_HK106_NC_019768: central tail fiber J; NCTC12130_02956; phage(gi428783299)0.0Showinfo_outline
7complement(2776580..2777167)PHAGE_Cronob_ENT39118_NC_019934: tail assembly protein; NCTC12130_02957; phage(gi431811064)7.55e-66Showinfo_outline
8complement(2777167..2777877)PHAGE_Entero_mEp235_NC_019708: minor tail protein K; NCTC12130_02958; phage(gi428781828)1.33e-115Showinfo_outline
9complement(2777880..2778638)PHAGE_Entero_mEp235_NC_019708: minor tail protein L; NCTC12130_02959; phage(gi428781827)3.29e-110Showinfo_outline
10complement(2778635..2778973)PHAGE_Escher_HK75_NC_016160: minor tail protein; NCTC12130_02960; phage(gi356870692)5.91e-53Showinfo_outline
11complement(2778976..2781432)PHAGE_Entero_mEp235_NC_019708: tail length tape measure protein; NCTC12130_02961; phage(gi428781825)0.0Showinfo_outline
12complement(2781470..2781934)PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; NCTC12130_02962; phage(gi401817606)2.70e-07Showinfo_outline
13complement(2782147..2782632)PHAGE_Entero_mEp235_NC_019708: tail assembly chaperone; NCTC12130_02963; phage(gi428781823)5.22e-80Showinfo_outline
14complement(2782636..2783133)PHAGE_Entero_mEp235_NC_019708: major tail subunit; NCTC12130_02964; phage(gi428781822)3.09e-104Showinfo_outline
15complement(2783181..2783546)PHAGE_Entero_mEp235_NC_019708: hypothetical protein; NCTC12130_02965; phage(gi428781821)1.19e-71Showinfo_outline
16complement(2783543..2784028)PHAGE_Entero_mEp235_NC_019708: hypothetical protein; NCTC12130_02966; phage(gi428781820)5.39e-42Showinfo_outline
17complement(2784021..2784353)PHAGE_Entero_mEp235_NC_019708: hypothetical protein; NCTC12130_02967; phage(gi428781819)1.19e-53Showinfo_outline
18complement(2784356..2784562)PHAGE_Entero_mEp235_NC_019708: hypothetical protein; NCTC12130_02968; phage(gi428781818)1.40e-12Showinfo_outline
19complement(2784623..2784949)PHAGE_Entero_mEp235_NC_019708: head-tail connector II; NCTC12130_02969; phage(gi428781817)3.10e-15Showinfo_outline
20complement(2784897..2785130)Uncharacterised protein; NCTC12130_029700.0Showinfo_outline
21complement(2785167..2786330)PHAGE_Cronob_ENT39118_NC_019934: major capsid protein; NCTC12130_02971; phage(gi431811052)0.0Showinfo_outline
22complement(2786342..2787010)PHAGE_Entero_mEp390_NC_019721: head maturation protease; NCTC12130_02972; phage(gi428782668)8.14e-113Showinfo_outline
23complement(2787028..2788242)PHAGE_Entero_HK140_NC_019710: portal protein; NCTC12130_02973; phage(gi428781942)0.0Showinfo_outline
24complement(2788302..2789735)PHAGE_Pseudo_PAJU2_NC_011373: putative terminase; NCTC12130_02974; phage(gi209552421)0.0Showinfo_outline
25complement(2789846..2790280)PHAGE_Pseudo_PAJU2_NC_011373: hypothetical protein; NCTC12130_02975; phage(gi209552420)3.75e-32Showinfo_outline
26complement(2790387..2790614)PHAGE_Escher_HK75_NC_016160: hypothetical protein; NCTC12130_02976; phage(gi356870735)3.24e-12Showinfo_outline
27complement(2790627..2790917)PHAGE_Rhizob_16_3_NC_011103: holin; NCTC12130_02977; phage(gi195546640)2.33e-24Showinfo_outline
28complement(2790929..2791696)PHAGE_Entero_HK140_NC_019710: central tail fiber; NCTC12130_02978; phage(gi428781960)6.06e-08Showinfo_outline
29complement(2791872..2792150)Uncharacterised protein; NCTC12130_029790.0Showinfo_outline
30complement(2792329..2792541)Uncharacterised protein; NCTC12130_029800.0Showinfo_outline
31complement(2792554..2793009)PHAGE_Salmon_ST160_NC_014900: Gp15; NCTC12130_02981; phage(gi318065945)1.84e-45Showinfo_outline
32complement(2792999..2793502)PHAGE_Entero_phi80_NC_021190: lysozyme; NCTC12130_02982; phage(gi824479636)2.73e-66Showinfo_outline
33complement(2793502..2793744)PHAGE_Entero_phi80_NC_021190: holin; NCTC12130_02983; phage(gi824479635)6.66e-18Showinfo_outline
34complement(2793887..2794294)PHAGE_Cronob_ENT39118_NC_019934: hypothetical protein; NCTC12130_02984; phage(gi431811073)1.77e-59Showinfo_outline
352794803..2795978PHAGE_Pseudo_H66_NC_042342: hypothetical protein; NCTC12130_02985; phage(gi100015)9.14e-10Showinfo_outline
362795968..2797230Uncharacterised protein; NCTC12130_029860.0Showinfo_outline
37complement(2797251..2797598)PHAGE_Shigel_SfII_NC_021857: antiterminator protein Q; NCTC12130_02987; phage(gi526244682)3.56e-51Showinfo_outline
38complement(2797615..2798604)PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC12130_02988; phage(gi428782365)2.93e-158Showinfo_outline
39complement(2798601..2799290)PHAGE_Cronob_ENT47670_NC_019927: phage antirepressor protein; NCTC12130_02989; phage(gi431810509)3.93e-86Showinfo_outline
40complement(2799307..2799693)PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; NCTC12130_02990; phage(gi100125)5.24e-77Showinfo_outline
41complement(2799690..2799932)PHAGE_Entero_mEp390_NC_019721: hypothetical protein; NCTC12130_02991; phage(gi428782707)5.78e-20Showinfo_outline
42complement(2799929..2801800)PHAGE_Pectob_ZF40_NC_019522: putative methylase; NCTC12130_02992; phage(gi422936661)0.0Showinfo_outline
43complement(2801797..2802687)PHAGE_Entero_SfV_NC_003444: DNA adenine methylase; NCTC12130_02993; phage(gi19549028)6.40e-135Showinfo_outline
44complement(2802684..2803550)PHAGE_Shigel_SfIV_NC_022749: replication protein; NCTC12130_02994; phage(gi557307567)8.85e-83Showinfo_outline
45complement(2803540..2803719)PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; NCTC12130_02995; phage(gi100119)9.48e-14Showinfo_outline
46complement(2803883..2804503)PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; NCTC12130_02996; phage(gi100118)3.32e-83Showinfo_outline
47complement(2804463..2804660)PHAGE_Entero_mEp235_NC_019708: prophage antirepressor; NCTC12130_02997; phage(gi428781851)2.35e-14Showinfo_outline
482804753..2805412PHAGE_Entero_mEp235_NC_019708: prophage repressor; NCTC12130_02998; phage(gi428781850)3.61e-49Showinfo_outline
492806353..2806865PHAGE_Entero_P22_NC_002371: EaE; NCTC12130_02999; phage(gi9635501)7.12e-44Showinfo_outline
502806862..2807530PHAGE_Escher_RCS47_NC_042128: baseplate subunit; NCTC12130_03000; phage(gi100105)3.67e-44Showinfo_outline
512807527..2808015PHAGE_Acinet_Bphi_B1251_NC_019541: hypothetical protein; NCTC12130_03001; phage(gi423262036)4.46e-31Showinfo_outline
522808384..2809241PHAGE_Salmon_118970_sal3_NC_031940: baseplate wedge subunit; NCTC12130_03002; phage(gi100108)2.50e-12Showinfo_outline
532809278..2809505PHAGE_Salmon_118970_sal3_NC_031940: baseplate hub assembly protein; NCTC12130_03003; phage(gi100106)9.10e-44Showinfo_outline
542809509..2810498PHAGE_Salmon_118970_sal3_NC_031940: baseplate subunit; NCTC12130_03004; phage(gi100105)0.0Showinfo_outline
552810574..2810653attR0.0Showinfo_outline

Region 5, total 64 CDS

#CDS PositionBLAST HitE-ValueSequence
13215948..3215960attL0.0Showinfo_outline
2complement(3223433..3224680)PHAGE_Caulob_Cr30_NC_025422: hypothetical protein; NCTC12130_03422; phage(gi725949380)2.92e-06Showinfo_outline
3complement(3224677..3225483)Uncharacterized conserved protein; NCTC12130_034230.0Showinfo_outline
4complement(3225768..3226193)PHAGE_Erwini_vB_EamM_Desertfox_NC_042098: hypothetical protein; NCTC12130_03424; phage(gi100094)1.60e-07Showinfo_outline
5complement(3227473..3227970)PHAGE_Escher_phiV10_NC_007804: putative lysis accessory protein; NCTC12130_03425; phage(gi89152449)9.72e-58Showinfo_outline
6complement(3227967..3228191)Uncharacterised protein; NCTC12130_034260.0Showinfo_outline
7complement(3228188..3228742)PHAGE_Escher_vB_EcoM_ep3_NC_025430: lysin; NCTC12130_03427; phage(gi712913195)2.27e-60Showinfo_outline
8complement(3228726..3229028)PHAGE_Escher_phiV10_NC_007804: putative holin; NCTC12130_03428; phage(gi89152447)6.94e-32Showinfo_outline
9complement(3229015..3229419)PHAGE_Escher_phiV10_NC_007804: putative integral membrane protein; NCTC12130_03429; phage(gi89152446)2.36e-66Showinfo_outline
10complement(3229572..3229685)Uncharacterised protein; NCTC12130_034300.0Showinfo_outline
113229856..3230752PHAGE_Entero_Sf101_NC_027398: O-acyltransferase B; NCTC12130_03431; phage(gi849122278)2.53e-13Showinfo_outline
12complement(3230770..3232833)PHAGE_Escher_phiV10_NC_007804: putative tail fiber; NCTC12130_03432; phage(gi89152445)8.68e-101Showinfo_outline
133233026..3233286PHAGE_Escher_phiV10_NC_007804: hypothetical protein; NCTC12130_03433; phage(gi89152444)4.46e-35Showinfo_outline
14complement(3233319..3233522)Uncharacterised protein; NCTC12130_034340.0Showinfo_outline
15complement(3233525..3236074)PHAGE_Escher_phiV10_NC_007804: structural protein; NCTC12130_03435; phage(gi89152441)3.69e-31Showinfo_outline
16complement(3236074..3237771)PHAGE_Pseudo_vB_PaeP_Tr60_Ab31_NC_023575: Hypothetical protein; NCTC12130_03436; phage(gi589286887)4.74e-52Showinfo_outline
17complement(3237773..3240394)PHAGE_Escher_phiV10_NC_007804: hypothetical structural protein; NCTC12130_03437; phage(gi89152439)3.82e-52Showinfo_outline
18complement(3240404..3240943)PHAGE_Escher_phiV10_NC_007804: hypothetical protein; NCTC12130_03438; phage(gi89152438)2.93e-68Showinfo_outline
19complement(3240943..3241407)PHAGE_Escher_phiV10_NC_007804: hypothetical protein; NCTC12130_03439; phage(gi89152437)2.47e-73Showinfo_outline
20complement(3241407..3243884)PHAGE_Escher_phiV10_NC_007804: hypothetical protein; NCTC12130_03440; phage(gi89152436)0.0Showinfo_outline
21complement(3243884..3244489)PHAGE_Escher_phiV10_NC_007804: hypothetical protein; NCTC12130_03441; phage(gi89152435)1.47e-118Showinfo_outline
22complement(3244489..3244809)PHAGE_Escher_phiV10_NC_007804: hypothetical protein; NCTC12130_03442; phage(gi89152434)2.89e-46Showinfo_outline
23complement(3244862..3245230)PHAGE_Escher_phiV10_NC_007804: hypothetical protein; NCTC12130_03443; phage(gi89152433)5.78e-30Showinfo_outline
24complement(3245241..3245681)PHAGE_Escher_phiV10_NC_007804: hypothetical protein; NCTC12130_03444; phage(gi89152432)1.08e-63Showinfo_outline
25complement(3245732..3246718)PHAGE_Escher_phiV10_NC_007804: major capsid protein; NCTC12130_03445; phage(gi89152431)0.0Showinfo_outline
26complement(3246733..3247434)PHAGE_Escher_phiV10_NC_007804: putative protease; NCTC12130_03446; phage(gi89152430)9.40e-92Showinfo_outline
27complement(3247445..3247894)PHAGE_Pectob_PhiM1_NC_041854: RNA polymerase sigma factor; NCTC12130_03447; phage(gi100049)6.06e-07Showinfo_outline
28complement(3247895..3248200)PHAGE_Escher_phiV10_NC_007804: hypothetical protein; NCTC12130_03448; phage(gi89152429)1.86e-35Showinfo_outline
29complement(3248200..3249864)PHAGE_Escher_phiV10_NC_007804: hypothetical protein; NCTC12130_03449; phage(gi89152428)0.0Showinfo_outline
30complement(3249879..3250085)PHAGE_Escher_phiV10_NC_007804: hypothetical protein; NCTC12130_03450; phage(gi89152427)1.48e-27Showinfo_outline
31complement(3251424..3253574)PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; NCTC12130_03451; phage(gi100002)0.0Showinfo_outline
32complement(3253871..3254467)PHAGE_Salmon_epsilon15_NC_004775: terminase small subunit; NCTC12130_03452; phage(gi30387380)4.92e-111Showinfo_outline
33complement(3254572..3254841)PHAGE_Escher_phiV10_NC_007804: hypothetical protein; NCTC12130_03453; phage(gi89152469)1.49e-39Showinfo_outline
34complement(3254903..3255025)PHAGE_Salmon_SJ46_NC_031129: DNA ligase; NCTC12130_03454; phage(gi100090)1.47e-08Showinfo_outline
35complement(3255025..3255276)Uncharacterised protein; NCTC12130_034550.0Showinfo_outline
36complement(3255273..3255476)Uncharacterised protein; NCTC12130_034560.0Showinfo_outline
37complement(3255473..3255817)PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC12130_03457; phage(gi356870659)3.36e-10Showinfo_outline
38complement(3255814..3256281)Uncharacterised protein; NCTC12130_034580.0Showinfo_outline
39complement(3256285..3256647)PHAGE_Pseudo_PAJU2_NC_011373: hypothetical protein; NCTC12130_03459; phage(gi209552470)2.80e-22Showinfo_outline
40complement(3256650..3257162)PHAGE_Pseudo_PMG1_NC_016765: hypothetical protein; NCTC12130_03460; phage(gi374531692)1.54e-15Showinfo_outline
41complement(3257159..3257764)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC12130_03461; phage(gi431810523)4.46e-19Showinfo_outline
42complement(3257821..3258285)PHAGE_Entero_Tyrion_NC_031077: loader of DNA helicase; NCTC12130_03462; phage(gi100045)2.22e-94Showinfo_outline
43complement(3258385..3259206)PHAGE_Escher_phiV10_NC_007804: putative primosomal protein; NCTC12130_03463; phage(gi89152459)4.01e-29Showinfo_outline
44complement(3259206..3260231)PHAGE_Salmon_epsilon15_NC_004775: cytosine methylase; NCTC12130_03464; phage(gi30387420)2.30e-152Showinfo_outline
45complement(3260228..3260422)PHAGE_Escher_phiV10_NC_007804: hypothetical protein; NCTC12130_03465; phage(gi89152475)3.06e-16Showinfo_outline
46complement(3260562..3260792)PHAGE_Escher_phiV10_NC_007804: hypothetical protein; NCTC12130_03466; phage(gi89152458)1.34e-37Showinfo_outline
473260946..3261536PHAGE_Escher_phiV10_NC_007804: putative transcriptional repressor; NCTC12130_03467; phage(gi89152457)2.63e-80Showinfo_outline
483261614..3261844PHAGE_Pseudo_PaMx42_NC_028879: hypothetical protein; NCTC12130_03468; phage(gi971751665)5.80e-12Showinfo_outline
493261916..3262062PHAGE_Escher_phiV10_NC_007804: hypothetical protein; NCTC12130_03469; phage(gi89152456)2.13e-15Showinfo_outline
503262204..3262644PHAGE_Escher_phiV10_NC_007804: hypothetical protein; NCTC12130_03470; phage(gi89152455)4.35e-22Showinfo_outline
513262644..3263540PHAGE_Salmon_epsilon15_NC_004775: hypothetical protein; NCTC12130_03471; phage(gi30387414)0.0Showinfo_outline
523263550..3264569PHAGE_Salmon_epsilon15_NC_004775: RecT; NCTC12130_03472; phage(gi30387413)0.0Showinfo_outline
533264618..3264869PHAGE_Escher_phiV10_NC_007804: putative transcriptional regulator; NCTC12130_03473; phage(gi89152453)1.79e-40Showinfo_outline
543264880..3265188PHAGE_Escher_phiV10_NC_007804: putative transcriptional activator; NCTC12130_03474; phage(gi155370095)4.48e-33Showinfo_outline
553265181..3265339PHAGE_Salmon_SPN1S_NC_016761: hypothetical protein; NCTC12130_03475; phage(gi374531225)3.58e-20Showinfo_outline
563265336..3265938PHAGE_Escher_phiV10_NC_007804: putative adenine methylase; NCTC12130_03476; phage(gi89152451)2.64e-121Showinfo_outline
573265935..3266129PHAGE_Entero_mEp237_NC_019704: hypothetical protein; NCTC12130_03477; phage(gi435439310)1.11e-24Showinfo_outline
583266126..3266242Uncharacterised protein; NCTC12130_034780.0Showinfo_outline
593266164..3266176attR0.0Showinfo_outline
60complement(3266391..3267644)PHAGE_Escher_phiV10_NC_007804: putative integrase; NCTC12130_03479; phage(gi89152450)0.0Showinfo_outline
61complement(3267837..3269414)PHAGE_Halovi_HGTV_1_NC_021328: carbamoyl phosphate synthase small subunit; NCTC12130_03480; phage(gi509140368)6.15e-05Showinfo_outline
62complement(3269494..3270960)PHAGE_Staphy_42E_NC_007052: ORF012; NCTC12130_03481; phage(gi66395520)8.16e-36Showinfo_outline
633271118..3271600PHAGE_Gordon_Cucurbita_NC_031029: hypothetical protein; NCTC12130_03482; phage(gi100057)1.38e-08Showinfo_outline
643271548..3272492PHAGE_Gordon_Bantam_NC_031074: late promoter transcription; NCTC12130_03483; phage(gi100046)1.31e-31Showinfo_outline

Region 6, total 20 CDS

#CDS PositionBLAST HitE-ValueSequence
1complement(3336510..3337079)PHAGE_Salmon_ST64B_NC_004313: Probable tail fiber assembly protein; NCTC12130_03546; phage(gi23505469)1.38e-37Showinfo_outline
2complement(3337096..3337944)PHAGE_Salmon_SEN34_NC_028699: tail fiber protein; NCTC12130_03547; phage(gi966201444)1.52e-24Showinfo_outline
3complement(3338061..3338225)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC12130_03548; phage(gi966201437)4.71e-21Showinfo_outline
4complement(3338415..3339437)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC12130_03549; phage(gi966201436)1.02e-135Showinfo_outline
5complement(3339480..3340145)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC12130_03550; phage(gi966201443)2.01e-109Showinfo_outline
6complement(3340142..3341341)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC12130_03551; phage(gi966201442)0.0Showinfo_outline
7complement(3341341..3341694)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC12130_03552; phage(gi966201441)1.35e-54Showinfo_outline
8complement(3341696..3342349)PHAGE_Salmon_SEN34_NC_028699: baseplate assembly protein; NCTC12130_03553; phage(gi966201439)5.85e-79Showinfo_outline
9complement(3342419..3342751)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC12130_03554; phage(gi966201437)1.32e-31Showinfo_outline
10complement(3343674..3343994)Uncharacterised protein; NCTC12130_035550.0Showinfo_outline
11complement(3344636..3345658)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC12130_03556; phage(gi966201436)1.24e-140Showinfo_outline
12complement(3345663..3345965)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC12130_03557; phage(gi966201435)1.14e-39Showinfo_outline
13complement(3345962..3346537)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC12130_03558; phage(gi966201434)9.91e-85Showinfo_outline
14complement(3346537..3347382)PHAGE_Salmon_SEN34_NC_028699: tail tape measure protein; NCTC12130_03559; phage(gi966201433)1.89e-09Showinfo_outline
15complement(3347372..3347560)Uncharacterised protein; NCTC12130_035600.0Showinfo_outline
16complement(3347560..3347985)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC12130_03561; phage(gi966201432)3.70e-42Showinfo_outline
17complement(3347989..3348429)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC12130_03562; phage(gi966201431)1.53e-71Showinfo_outline
18complement(3348440..3349600)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC12130_03563; phage(gi966201430)9.05e-165Showinfo_outline
19complement(3349604..3350152)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC12130_03564; phage(gi966201429)4.25e-71Showinfo_outline
20complement(3350232..3350666)PHAGE_Endosy_APSE_1_NC_000935: P5; NCTC12130_03565; phage(gi9633603)5.43e-49Showinfo_outline

Region 7, total 29 CDS

#CDS PositionBLAST HitE-ValueSequence
13426365..3426387attL0.0Showinfo_outline
23436103..3436426CP4-6 prophage; putative GTP-binding protein; NCTC12130_036510.0Showinfo_outline
33436587..3436964CP4-57 prophage; putative GTP-binding protein; NCTC12130_036520.0Showinfo_outline
43437057..3437719PHAGE_Yersin_fHe_Yen9_04_NC_042116: hypothetical protein; NCTC12130_03653; phage(gi100019)1.13e-49Showinfo_outline
53437700..3437945PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; NCTC12130_03654; phage(gi16130540)1.31e-32Showinfo_outline
63438236..3438258attR0.0Showinfo_outline
73438299..3438826PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; NCTC12130_03655; phage(gi16130540)3.58e-99Showinfo_outline
83439354..3440112Uncharacterised protein; NCTC12130_036560.0Showinfo_outline
93440112..3440498Uncharacterised protein; NCTC12130_036570.0Showinfo_outline
10complement(3440546..3441445)PHAGE_Burkho_phi1026b_NC_005284: gp58; NCTC12130_03658; phage(gi38707948)5.72e-13Showinfo_outline
11complement(3441479..3442381)PHAGE_Burkho_phi1026b_NC_005284: gp58; NCTC12130_03659; phage(gi38707948)1.21e-11Showinfo_outline
123442609..3442863putative hydrolase; NCTC12130_036600.0Showinfo_outline
133442974..3443738short chain dehydrogenase; NCTC12130_036610.0Showinfo_outline
143444221..3444865DNA-binding transcriptional regulator; NCTC12130_036620.0Showinfo_outline
153444976..3446388PHAGE_Burkho_KL3_NC_015266: gp47; NCTC12130_03663; phage(gi327198092)3.50e-129Showinfo_outline
16complement(3446431..3446589)membrane protein; NCTC12130_036640.0Showinfo_outline
173446829..3446942Uncharacterised protein; NCTC12130_036650.0Showinfo_outline
183447304..3447753inner membrane protein; NCTC12130_036660.0Showinfo_outline
19complement(3447766..3448110)protein; NCTC12130_036670.0Showinfo_outline
203448272..3448598protein; NCTC12130_036680.0Showinfo_outline
21complement(3448648..3449979)GntR family transcriptional regulator; NCTC12130_036690.0Showinfo_outline
223450068..3450502putative decarboxylase; NCTC12130_036700.0Showinfo_outline
233450684..3450929PHAGE_Mycoba_Adler_NC_023591: glutaredoxin-like protein NrdH; NCTC12130_03671; phage(gi589892251)1.07e-16Showinfo_outline
243450926..3451336PHAGE_Bacill_SPG24_NC_030903: hypothetical protein; NCTC12130_03672; phage(gi100023)1.79e-16Showinfo_outline
253451309..3452247PHAGE_Coryne_Zion_NC_042087: hypothetical protein; NCTC12130_03673; phage(gi100076)1.25e-116Showinfo_outline
263452249..3453454PHAGE_Lactoc_phiL47_NC_023574: ribonucleotide-diphosphate reductase subunit alpha; NCTC12130_03674; phage(gi589890883)4.81e-118Showinfo_outline
273453465..3454427PHAGE_Mycoba_Bongo_NC_041970: baseplate wedge subunit; NCTC12130_03675; phage(gi100108)1.27e-170Showinfo_outline
283454781..3455983PHAGE_Bacill_G_NC_023719: gp245; NCTC12130_03676; phage(gi593777701)7.79e-35Showinfo_outline
293455976..3457049PHAGE_Bacill_G_NC_023719: gp243; NCTC12130_03677; phage(gi593777699)2.29e-07Showinfo_outline
Pseudescherichia vulneris strain NCTC12130 genome assembly
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Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)

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Length: 4427509 bps
Phages: 7
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Lysis
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Fiber Protein
Plate Protein
tRNA

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