PHASTER

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Submission Results

Sequence Name: Not Available

GenBank Accession Number: UGHO01000001.1

GenInfo (GI) Number: 0000000000

Download Results: UGHO01000001.1.PHASTER.zip

Summary
Details
Genome Viewer

gi|00000000|ref|UGHO01000001.1| Hafnia alvei strain NCTC8535 genome assembly, contig: 265322, gc%: 48.97%

Download summary as .txt file: summary.txt

Total: 6 prophage regions have been identified, of which 4 regions are intact, 2 regions are incomplete, and 0 regions are questionable.

Region	Region Length	Completeness	Score	# Total Proteins	Region Position	Most Common Phage	GC %	Details
1	13.9Kb	incomplete	50	16	376-14285	PHAGE_Cronob_ENT47670_NC_019927(11)	47.50%	Show
2	47.6Kb	intact	110	82	1371596-1419202	PHAGE_Cronob_ENT47670_NC_019927(18)	0	Show
3	37.8Kb	intact	150	45	2041989-2079832	PHAGE_Entero_mEp235_NC_019708(7)	0	Show
4	35Kb	intact	130	44	2545183-2580226	PHAGE_Aeromo_phiO18P_NC_009542(18)	0	Show
5	24Kb	incomplete	40	29	3855980-3880037	PHAGE_Burkho_BcepMu_NC_005882(21)	0	Show
6	30.6Kb	intact	100	57	4660542-4691240	PHAGE_Edward_GF_2_NC_026611(7)	0	Show

Region DNA

>1	 376-14285
GTGACTAAGGCGGTGGGGCCACTAAACGAAAAGCTGGCAAATCTTGAAACCCAACTATCG
GCAAACGCTGACAAAGAAAAGTCAGATAAGCGTGCAGCGGTAAAGGCTAAGTTTTCTCTT
GAGGACGTTGCCGTTAACGCATTAGACGGTGCCGCTCTGGACGGTCTGTATGCCCAGTGC
CAGACATCATCCCCAATCAATCCGGCGTTCAACTTCAATAGCGCTGATACCTCAATTTCT
GACATGCCGGAGTAAATAAAAATGGCTAAAGACGGAAAGCACGTAATACACGCCGGTGGC
GTATTCCCTAACCCGGTTCTCAATCGAGAAGGTGCAGCGGCAGCGGCCACGAAACCAGGC
ACTATCGGTGCATTCGTTACTGGTAAGTTCACCGCATCGGTAGATGGTAACGAAGAGGAT
CCTATATGTCGCTGATTACGATTATCTGCGCTGCCAAACAGTCGACGACGCAATCCCTGT
TGGTGAATTAGTCGTTGGCATCCAGCCAATGCAAGGGATGTTCCTGAACGTCCGCGCCGC
CGCGGAACGTATAAAAAAGGCCAGCCGCTCTCAATTGCTGATGGGCAGGTAAAAGCACAC
GCAAGCGGTGAATCTATCCGCGCATTCGTCGAAGAAGACAAAGCATACACAACTGCCGCG
GGTGATCTGCTGCGTGTCGTGATTAAGTAAGGAGAGCCTGAATGTTTGTATTCTCTAAAA
AGCTGGGTGAAGAGACCGGCAACTACGAAGTTAACCAGCTTCAATTTAATGAACTGAAGA
CCGCCCGAGCGCAGGGTGCACAGGCAGCAGCAGACTTTATTGGCCGTAGTCGTGGTATCC
GTGAAGATGCTGGTCGTTTAGATGCAGCTAATGCCGTAGATGACATTAAGCGTTTATACC
GTGCTTATGACCAAACAGTTCTGGAGCAGTTTGAGCCTAATACTGAATTCACTTTGCTGA
ATGACCTGATCCCACTGTCGCGTTCTGTCCGCTTGGAAGAGTCGGTGTATGAATACGCTC
GCACCGGCGGACGTGGTTGGGCTCATACCTCAATGTCTGGTCAGATTGGTGCAGCGTTGG
ATGCCCGCGCCTACAGCTTTGATGGAACGATGGTTCCAGTGCATGACTCTGGTTTTAAGT
TCCATTGGCGTGATCCAATCTTCAATAAAGGCTCTGCGCTGGCCTCTCTGTCAGATGCTC
AGGCAGGTTCTGTTGATGATGTCCGCCGCCAGTACGTGGATTACATGTTCAACGGCTTCC
GTGACTCCGAAGGTAATTATGTGACCTTTGATGGCAAAACATGGAAAGGCCTGAAGAATG
ATGATCGCGTTGGTCTGGTTGATTTGGGCGCATCTGGCCTGAACATTGACTTTACCTCTC
CTACTGCGACTTCTGAGCAGATCCGTAATGCTGCGATTAAGCTGCGCGACACGCTGAAAA
TCACAAACAGCATGTATGCACAGCAAACTTGGTATGTATCCAGTGACATCATGTCTAACT
TGGAGCGCTTCTTCAGCGATAACTACCAATCAGGCACCATTCTTCAGGAATTGCTCAAAC
TGTCTGGTATTGCGGGCAATCAAAGAAGATGCTCAGCTTACTGGGAACCAGATCCTGATT
GTTCCATTGGGCGCTGGTGTTATTGCTCCGGTTGTTGGTCAGGCAATCGGCACCGTTGCG
GATCCACGTCCGTTCTACAACTCAGATTATATCTGGCGTACTTGGGGCGCTATGGGCTTG
ATGGTTAAGCAGGACATCAACCTGAAACATGGCGTTATCTACGCACACAGCTAAGGGGCT
TTCTAATGGCACTAGTTAAAGTGGTTAGCAATAACCTGTTCTCTGGTGCCAACCTCCAGA
AATTGGCGGTTGGTTCACAGGTGAATGTTGATAATTCAACAGCAGAAAAATGGGAGAAGT
CCGGATTGGTGGAAGTTCTTGAGAAGCAGACCTTTGAGGTTGCAACTCCTGCGGAGGGTG
CTGATGCTCAGACCGAGCAGACCGAGCAGACCGAGCAGACCGAGCAGACCGAGAAGCCAG
CAAACACGAAAAAGGCTAAGTAACCATGGCAAACCCAATTACAGCTGATGATGTTAAAGC
CTTCCTCGCTGAGTTGGGCTATTCCATCCCAGACTCGCTATTAACACCGATCCTTTGTCG
GGTTAACTCAATCATCACTGCATGAATGAGCAGGGTATGACGATTGCACACAGCAGCTAA
TCTGATGTATGCCGCTCTCTTATGTCCGCTCATCCGTGCCAGAAAGATTAAATCTCAGTC
TGCACCTTCTGGCGCTAGTCCTCATTTGAGTATGCGATGATGCAATATCATGGCTTAGAA
GCTCCCTGTCATCGCTTGATACGAATGGCTGTGCCAACACGTTACCCATTACCGCTGGTA
GCACGGTTGGCTTTTTTGATGTGGTTGGAGGTTGCTAATGCCATCGATACAGCAGACCAG
CGTCTGCCTAAGCCATTCGTAGTTGTGTGGCACTACCGACAGCGGTAGAAAGGTTACGGC
ATACGTTAAGAGCAATGGTGATTGGGTGGTCAACTGCCCAAAGGTTGCGGCTGGGAATCC
AACTATTGTGGGTGGCGAGAATGACAGCGACAGCCAACTGGAGCTATACGGCGGAGGCCA
CAATCTGGCGTAGCATCGGAACTGATGAGTGGAATAAGCCATCATTCGCCGCACCTTTCA
CTATTGCATGCGACTATGGGGCGACTCTAAACGCGGTAACGCTGATGTTGGCCGTGAGTT
CGTAGTGAAAGATACCGTCTGGACTGAGTACGCTGAAGCCAAAGAGGGTGACTACCTGCT
GATCGGAGTATCGACCGAGGCAACCTATCGACGCCGGTGCCGATGAGATTAAGCACATCA
TTCGCTATGCGGACACATTTGATCGCGTTGCTGATGATTATGCATTGATAACCGGAGTCT
GATATGGGCGTTAAGGTGAAGGGTAGAGCTAAAGCTAGAGCCAATATGAGTAGGCTTATT
GTGATATTCAGGGCAAAAAGGCTGTTCGGGCAATGTACTCTGGCCTTTATGTGGGAATGG
AGCTAACCGCGCTCTATACGCCGATCGGTAATACGTCAAATCTGATAAACAGCAGATATT
CATTCGTTGATGTAAAGGGAACTAAGTTGATCGGAGAGCTGGGTATACCGCTGGTTACGC
ACAGTACGTACACGACCCTAACGTTAAGCAAAATTTCAGGCGCTCCACGGCTAAGAAGGA
ATTCCTAAAACTTTCATTTGAGGAATCTCGGGCAAGGATTGATGCTGTAATGAAAAAGGA
AATGAGCCTATGAATACTCCTGCTTTCATCAGCTTCATGAATTACTTAGAAATTAGCCAC
CTCACTGATGGTTATAAGTTACAGATGGTTCAGTGGGAGGAGCAACCAGATGACAAGGGA
ACCATGAAATATATGGTTTTCCAGCCTAATGGTGGCTCTGGACGAGTTTATGATATCGGG
GCTGATGATACCGTAATGCTGACACTGGTTAGTGCTAAGAAGGATGCATTGCCAGTAATT
GAAAGGTCACAAGAGATTTTGGATTACGTAACAGAACATCCAATCGATCCCTGTCTGAAC
TCAGTATTTAACCTTGGCGGGATGCCAACGCCAATACCTACGGAAGGGGGAAGAACGGTC
ATCAGACTTTTGTTCCGCTGCACTGCATAACCAAATTCAAAACTAACAGGCTGCCTTATG
GTGGCCTTTTTATTTCCAACAAAAGAGGTAAGTCACCATGGCAGATTGCCAGAATGATTA
CGGGAAGTTAATTGGCCGCGTCGCTATTCTGCGTCTTGCCGAAGGCTGCCCAGATACAGT
CCAGAACAATCAGAGTTCGTGCGCATGGGCGCTCTGACCACCAAGTCAATCGACTATTCA
ATGAACACTGTCACTTCTGAAGCTGACGATACCAAAGGTCTGGTTGAGAACCTTGTTACT
AACATGGATCTGACTATCAGCTTTGATGGTGAGTGGCGTAAGCGCGATAAGCCAACTGAC
TTTGGCCCAATCAAACTATCCAAAGAGCTATTGGCAGAAACCAAATCTGGCCGCCAGCCG
ACTTACTGGGTTCAGTTTGATTTCACCGGTGAAGACGCCGTAGTTCTCCAAGGCTATATG
GCTGCGACTTCATGGTCTGGCGAGTTCGGGGCATCTGATATCGCAACTTATTCCGGCGAA
TTCAAGGTGGCTGACGCTGATACTGTCGAATATCTGGAAGAGGAAGTTCCTGTTACGGGT
GTAACTGTCACTCCGACCAGTGGAAATGTTGCCGTTGGCGCTACGACCACATTCACGGTA
GATGTAGCCCCTGCTGGCGCAACCAACAAAGCCTACACGGTAACGTCATCTGCACCATCA
AAAGCAACGGCAACACTATCTGGAACTACGGTAACGGTAACAGGCGTGGGCGCAGGTACG
GCAAACATTACTGTCACCACAACCGACGGCGCAAAGTCTGCGGTTTACGCGGCAACAGTA
ACTGCTTAGTAAGCACTACAGAGGGTATCGATGATGCCCTCGATACTGCTCACAAGGAAT
TCACATGACACCGATCACCGACATTGGCGAAATGCTTATTTCAGACAGTGAGAGGGACTA
TTTCTTTCGGCCTTCACTCGTTGCTATGGCAAGAATCGGATCGCCGTCTGAAATCGTCGC
TGCGCACGCAACCATGAATGGATTTGAGGTTTTTAGGCTAATTTCACAAGCCTCTGATGC
ATGGGGGAAAGTCCCTGAATGGCTGTTAAAAACAATAAAGACTCCCGTATATGGCCGCCC
CGTATTGGCTACAGCGATGAGCATAATGCAGGCGTGCTGTGACGATGATTTAACCTTGCT
GATTGGAGAGTGGAGACCCGGTAAAAAAGGTGTCGTCTACCGCAAAGGGAAGATGGGGAT
TGGGGAGATAATCATCATTGCGCGTGAGCTAATAGAGCATGGTGTTATCGGTAAGGCCAA
GCTTAGAAAGCTACAAAAGCATGAAAGTAAAGATGAGTATTCCTCAGAGTTTCGAGTGGT
CGATTATATAAACGCGGCGCGGGCTCATTTCAACATGCCTAGAAGCGAAGCTGAACAGCT
AACCATGACAGAGTTCCAGCTCATGCTTAAAGCTAAATACCCAGAAGAGAAAGGATTCAC
GAAGGAAGAGTATGACGCGGTGATCGACGCGGATGATAAACGGACTGCTGAATTACTCTC
TGGTCGCCGCAGATTGGTCAAGTCTAAGAAGTTACCGGCTAAGGCCGCTTAATGTCACAA
CCTGCTACGGCAGGTTTTTTTATGTCTGGAGATCGTAATGGCAAGCGAGCAGGAAGTCGG
GAATATTATTTACACCGTCCAGATGGATGTTGCTGGACTCATTGCCGCTCAGCAGAAAGT
AAATGACCGTCTGGATAAGATGGATGGACAGTTTGCGAAAACCGGTAAGGCCGCGGATAG
CACAAGTAAATCATTTGCATCGTTAACCAAAGTAGCTACTGCGTTGACTGCTGCGCTTTC
GGTTCGTGAAATTGCAGCCTATGCAGATGCGTGGACAACGGTTAACAACAAGCTTGTTAA
CGCAGTTAAACCGACTGAGCAATTAGCTGATGTTACACAGCGTGTTTTTGATATTTCACA
GGATACGCGTTCTAGTTTGACAGCAACGGCAACACTATATGGACGACTAGAAAGGGCAAC
TAGGTCAGCAGGGGTTAGTACCGATGATTTATCCAAACTGACGACTACTATTAATAAGGG
GCTTGTCGTTTCAGGCGCTACCGCAGAAGAAGCTAGTTCTACTATGGTTCAGCTTTCTCA
AGCCTTGGCGTCTGGCGTTCTTCGTGGAGAAGAATTCAACTCAATTTCTGAAAACGGGTC
GCGTTTGGCTGTAGCACTGGCTGATTCGTTAGGCGTAACCGCTGGTGAGCTCAGAGCAAT
GGCAGCCCAAGGGCAGTTGACGACTGACGTTGTTGTTAATGGTCTTCTTTCGCAAGGTGA
CGCGATAGGTCGCGAGTTTTCCAACACTATTTCCACTATCGGTCAGTCTCTGACAATTGC
TGGAAACAACTTAACCCAGTTTATTGGTAGTTCAACAACCGTCCGTTCTTCTGTCGCAAT
CTTCAATGATACGGTTGTTACCCTGAGTGAAAATCTTGACGCGGTATCCACTGTCGTGAT
CGCTGTTGCAGCTGTAATTGGCTCTCGCTATGTCGCGGCTCTGACTATGGCGGCTGCTAG
CCAGTTGAAGGTGGCGGCCACTGCGTTTACCGCCTCAACATCACTTTCTGCGTTTGGTGC
GGCGACTAGCTTTGCTAGCAAGGCATTATCTCTAGTTGGTGGCCCAGTTGGCTTTGCTAC
CCTCGCTGCATCGGCGATCTTTTTCTTCTACCAGAAGGCTCAGGAGGCGAAGAGAGCAGC
GGCAGAATTAGCTGATGGTGTGAACGAACTCACTGGAAAGATGAAGGAGATGTCAGCAAC
AGAGCTAAATGCAACCATAGCTAAATTGCGGACAGCATTGCCAGAACTAGGGGAACATAT
GAAGATGCAGCCTCCTCTGTAGACACTCTAAAATCTAGATTAGCAAGTGCGCAGGAAAGT
CTAGATAGCGCTAGCAAGGGATCTGCTAGATATGCTGAAGCAAACAGGCTTGTGACAAAA
TATACGAATGAATTAGCTATTGCAGAGGCTGATGCTGAGAAGGCTGGCACTAGGTTAAGC
CAAACTAAAAGCGCCATCGTTATCGCCCAAGCAAACCTCAATGGCAACATGAAACAAGGT
ATAGATTTACTTCGCAGAGATGGTGAAGAGGCTGGCGTAGCTGCTGGCATGATGAACCAG
TTAGGTAAGGCTATAGCATTTGCTGCTGGGCAAAAAGAAAAGTTCAACGCGACGTCTCTA
ACTGTTCAACGTGATCCGAAGCAGCAGCAAGTTCTCGACGACCTCTACAGTCAAAATGAA
TTGCTGTCCGAAACTAATCTTAGGAAACGCGAACAACTTAAGGTTGAACAGCAACTGAGA
AAGTTAGGCGCCGATGATGAAACAATTCGCATCGCTCGGGAAAATGCTGGGGCTAACTTT
GATTTGGCAGAGTCTCAAAAAGAGGTAGCTAAGGAGACTAAGGCTTCAGCAAAAGAGCAA
ACAGCGGCAGAGCGAGCGGAAGAGTCGCGCGCTAAAAAGCTGCAAGATTTATCTAATGAG
ATGGCTGTTGCAGCATTGAAGTCAAAGGGATTGAACAGAGAGGCTGCGCAATTAGCAGCA
GTTCAGGAACTTGGCGCCGGAGCTACTCAGGCTCAAATCCAGCAGGCTCAACAGCAAGCA
GGACAAATATTCGATATTCAGCAGCAAGCAGCAGATAAGAAAGCCGCTATAGATGCTGAC
TCGGCAGCAAAAGCTAAGCAACAGCGTGACTTGGATAATGCACAACTTGATCGTCAGCTT
AAAGCCGGTGACATCACGTTTGAGCAATCTCAACAACGTCGCGCTCAAATTGCTGCGGAC
TACTCCAAGGCAATTGCTGATGCCAATGCTAAAAAAGCAGTGTCACCGGAGGCAGCAAAC
AGAGCACAAGTAGATCCTGTTACTGAGCTGGCCAATCAGAATGCCGAAAAGCTAGCTTTA
ATGCAGACGTACTACCAGCAGGAACAGGCTGCACTTGTTGCCGCAAGGGCTGCCAATAAG
TTAACCGATGACCAATATCAACAGGCCAAGCTTGCTACTGACGCGCAATATTTGGATTTG
ATGAATGCGCAGAATGCCCAGTATGAACAACAAAGAACAGATGCTTTGTGGTCAATGCTA
AGCCAGCAAGGGTTAGGCTATAACATGCTAACCAGCGCTGTAGATTCATTTGCAGGCAAT
GCCTCCAACGTTCTGACAGGGCTTCTCACAGGAACAATGTCAGTCTCTGACGCTATGCGC
TCGCTTGGTAGCACGATACTGAATAGCGTTATCAACTCGTTGGTTCAGGTTGGTGTTGAA
GCGCTTAAAAACTTCATTATTGGTCAGACGATGGGCGCGGCAGCTGTAGCTGCTGGTGTT
GGTCAGGCCGCAGCACTGGCTTCAGCTTGGGCTGCGCCAGCTGCGTTAGCATCACTAGCA
TCATTCGGTGCAAACGCAGCACCAGCCTCTGCTGGCATTATATCAACGATGGGGATAGCT
CAAGGGGCGGCGTTGGCTGGTGCTCGTAAAAATGGTGGGCCCGTGTCTGCCGGTTCTATG
TATCGGGTCGGTGAGGGAGGCGCGCCCGAGCTTCTGCAATCTGGCGGCAAGAATTACATG
ATCCCCGGCGACGGTGGGAAAGTGATTAGTAATGCTGACCTACAGACCTGTGGTAGCGGT
GGTATTATCGTATATAACAATATTCAAAACTACACTAGCGCAACTGTTGATAGCCAAGCC
ACAGTTAATGAGGATGGTTCTGTTAACATACAGACCATCGTTGCAGATATAAGCAATGGT
GGGCCTATTAGCCAATCAATATCAAGGTATCATCAAGCTCCAAGGCGAGCGATTCAATAG
CGAGGCAAGAATGGACAAACCCAAACAATCATGGAAATCAGCGTCATTAGAAGTAGGTAA
AACAGTAAACATAGGTGTTAACAGAGTAATTAATTTTAAAATTACGACATCTGGTGGAAC
GGTGATTGAGGGGATTATTCCTGCTAATGAGTATTTGTCTATCACGAACGGTGGGGACAT
TACCGGCGCAGAGATGAATATTTATGATATTCCTGAAGGACCTAGTGAAGTCAGCTAACC
CGCTTCGGCGGGTTTTTTATTGCCCGGAGATCATGAATGACAATTCCATATCCTGACTGG
CTGCCGCTGGCGCAGAAGTCTGATAAGAGTCCGGCGACAGATACAGGATTCAGAACAGAC
CAACCTTTGGTTGGTGCGCCAATCTTCCAGAAATTAACCGACGACCTGAAGACTTCATTC
TCTCTCAAGTGGATATTCACGTTCACACAGCACCGTGCCTTTATGCAGTGGCTGCGCAGT
CCGAACTATCTCGATAACTGTAACCAGTGGTTCTCAATGCGGTTGAACAATGGCACCGGA
GACACAGGTTTAGAGTTGCAGGAGTTGCACTTCACCGCGTGGCCAACGTGGAACCAGACG
GGAAATATCTTCACGTGGTCGGGGAATGTCATCTGCAGGAAGCTTAATAATGCTGATGAT
GAGTTTGACGACATTATTGTCGAGCTGCCGCCGCCGTGGGATAGCTGGCTGGATATCATC
GTCACTGGCTATCCTGATAACCGCGATCCGGAATCATTGCCTAGGGTGCCATAACAATGC
CAACACTAAGAGAGTATCGGGCTCAGCGCCCGAACCGGATAATCTACGAGACTATTGAGT
TTCATCATGTATCTTTCGGCAGCTTCTATCTAGTCAATAACCAAGTTTTCCCGAAGACGC
TCGGCGGCGTGGAGTATAAGCCATGCCGATTCGAGCTATCTGAAAGCCAGCAAAGCAGCA
CACCAATCATCGATTCAACGATTAAGTTCAGTCGTTTGGCGCAGGACTTTAAGCAACAGT
TGAAGGTCTGGCGTTCGTATAGCCGCATTGAGCCTATCACAGTGACTTATCGGCTGTTTG
ACTCTAAAGACATGACAACTGCGATTAAAGAGTGGCAGTTATACGTCAAAGATTGCTCAC
TTGATGCTGATAACGTCAACGTTTCTCTATCTATGACCAATCCGCTTAATACCAACGTGG
CATTGCTGTATGACCCAGCAGATTGGCCCGGTCTCGAAATCGGATAAACCATGACTAAAT
CTGACTTTATCAAACGGATGATCGGCGTTCCGTGGTCTAACCGCGCCTGCTCGATTGAAG
CCTGTGACTGCTGGGGCCTCGTCGCGCTTTATTACCGGCATGTGCTTGGCAAAGAAGTAC
ATCACAAAGCTGGGTATGAAAGTAACCGTGATTTCCTGACCTGCTACAGAGAAGAGGTGG
TGTTTTGGCAACGGGAGAAATTACCCGTCGAAGATGGCATTTTTGTTGGCTACATGGGGC
GTAGAGCGGAGCACGTTGGGTTAGTACTTAATGGGATGGCGTTGCATAGCCGCGGCCTCA
ATGGTTCGGTGAGGCTCGACAAACTGCGTGTAATGGAAAAGGTATTCACTAAAGTGGAGT
TTTATTCGTATGGCACTTCTAGAAATACAGCACTTGCCCGGAGTACCGAAGGAGAGAATT
GAGCTGGCCAACGGCTCTAACTTTTACACGTGGTTGGAGCAGCAAGCGTTTGATATGGAT
ATTGCGATCGTCATTAACGGCGTGTTGGCAGATGAGGAAACCGAGCTTTCATTTAAGTTA
ACAGAGCTTCACCGCATCCAGATATTCAACCAACCTCAAAGTATCGTTAGCGACATTCTG
AGTCCGGTCTTCAAACTCGTCACCAAAGTATTTTCATTCTTAGCGCCTAAACCTTCATTC
TCGTCAGCAGCGGATAACAATGCCAAAGAGAGCCCGAACAATAAGCTGACCGGTCAAACA
AATATCGCCCGCACGTATCAAGCGCGTCCTGATATTTACGGGCAGGTTCGCTCATTTCCA
GACTTGATTCAGCAGTCTATGTTCGAATTTATTGGCAACATCAAGTACGTCACAGAGTGG
ATGAATTTCGGGATTGGGAACTACACGGTTGAGAGCGTGCGCTATTCAGAGTCAAGCTTG
GGTTCTATTGCCGGTGCAAGTTACCAGTTTTATCCTCCTGATACTGTCATTCCAGAAATT
ATCCAAGGATTCGAATTTGATGACGTTGACGGGCAGGAGGTGCTGGGGCCAAACGAAGAC
AACAGCGAGCAAGTCGCTACGGCAACAACGAATGATGTGGTGTCAGGAACAATCACTGGT
ACATCTGCCGCGGTTAAAATCGTGCAGTCATCTGATTTTGATTACTTCTATGACATCCCT
AAGCCTCTACCAGTGCAAGTTACCGTCAACGTAACACGTCATTTAGCATCCGGTGATGTA
ACAGAGAATGTCACGTTCTCTGCATCGTTGGATTCAGCTACTGAGTCTGATGATGGCTCT
GTTATCGACCCAGTTAAATACTTCACATTCCAGCTATCAGCCATCAACAGTCCAGTCGAG
ATTCCGGCTGGTTCGACTATCAACAACACGATATTCACGCTGACTGAAAACAAAGGGAAT
ATCTCGGGGCCATACTTCGCGGCGATTGAAGGCGATGAGCTGTGGGTACATCTCCAAGCT
CAGCTTGGTAAGCGAGAAGGCGCTGACTTCTTGTTGGAGTACTGGGCTGTGAATGACGAT
AACGACAGAATTTCACCGACATATAGCTATTCCAGCTTTGTATTTAACGCAAGTTACAAT
CGCGCTGATTATATATATGGCACATTCAAGTTCACACCTCCATACGGTAAAGCGCGATAT
GCGTTCCAGCTGCGAAAAACTAACAACAGTTCTGACAGCAATCTTCTGCAAATAGCAGAG
GCGCACTCAGTAACACGCCGCAAGAATGTGACATATCCAAATGACACGCTGGTGAAAGTC
ACGGTACGCGCCACGGAACAGGCCACCGGATCACGTGATCGCAAATACAATGCACTCGTT
ACGCGTCACACAATCAGCTACGACATAAACACTCGCACGGTTGACTATACACTTAGGCCG
TCGCGCAGCTTTGCCGATGCCGTTGCTCATGAGTGGCTAGTGATAGGGAAGCAGCCAGAG
GACACGATAGACCTGTACGAGCTTTACAGCATCTATCAGTCATTGCCAGACCCACGGCTT
GGATACTTCGATTATACGTTTGACGATGAAGACATCTCCCTCGGTAACCGCGTAGAGACT
ATCTGCAATGCGGCGCGAGTAATCGCGTACTGGGACGACGGCGTTCTGACGTTCGCCAGA
GATGAGCGCAAAGAGTACCCATCTGCTGTATTCAACCGCGCAAATATCGTCGCTGATGAG
TACAAAATCAGTTACGACATGACCATGCCAGGAGGATACGACGGTGTAGAAATAGAGTAT
GTCAGCCCGAAGACAAACAAGAAAACCTACATCCGGTATCGCATCACAGACACAGGTATT
GTTGAGCAAGCGGCATTATCTCCTCTGAAAATATCGCTTAGTGGATGCCGTAACGAGTAC
CAAGCAAATGATAGGGGGCTTCTGGAAGTTAACCGGCTGATCAGCTCACGCATGAAAATG
AATATGAAGACACTGGCTGATGGTGAGTATGTTTCACCCGGTGAAATGATTGTTGTTGCG
GATACATACGATACAAACCAGCAAGCCGGTTACATCGTCGCGCGTAACGGGAATAACTTT
GATACGAGCGAGCAAATTAACTTTGCTGGCGACATGTATGTCAGGGTAACCGATTCGATT
GGCAACTCTACAGACAAAATCAGAGCATACCCACGCACAGACACCAAGTTTGGATTCACC
GCCGCGGTGCCGAGTATCACGCTCAATATCTTCGACGGCTACAACGTTCAATCCCCATCC
CGCTATGTCATCGCGACAACAGCAGAAATGGAGGCTATGCGCTGGCGAGTATCTGACAAG
AAACCTAACTCAGACGGCACATTCTCACTGACGTGTGACGAGTATTTCGACGCTAAACCA
GACTATAACGTCTAACCAAAACCAACTCACAATAACCCAGCCATAGCGCTGGGTTTTTTT
ATGGAAAAATTATGGCGACTCAACCTACAAATCTACCAGTCCCTAGTGAATCAGCCCGCG
ACCTGAAATTTAACGCGGGAAAAATTGACGAGTTTGTTACTTCGGCAAGCCATGAATATA
TTGACCGATTTGGTGGTCGGCATCGTACAATAGCCGGTATAAATTATGAATCAAATCAGG
CTATGTCTAATTATGGCTACATCACGCAGAAATCTTTTGAAATGGGCTCTACCCTCAACA
CTCCTAACACTGTTCTCCAGTGGGAAAGCAATGGGGAGTTCTATCGCTGGGACGGGGACT
GGTCACAACCCAAAGTAGTCCCCGCTGGTTCTACACCAGATAGTACTGGCGGGATAGGTG
AAGGGAAATGGGTTGGTGTCGGGGATGCGTCGTTGCGTAGAGATTTATCATCCTCTCTAG
ATGGGAATGGCGATAATTTAGTAATGCATGGCAGCAAGACTGTTAATCAAGTGATTAACG
ATGCATTGAACAGCATAGATAAAATAAAATATTTCACCACTTTTGGTAACCACCTTACAT
CGCTACATGGTGCAGGTAAGTCACTTGGGGCTGAAAATTCATTAATTACTGCAACTCTAT
TAAGCAAGAGGAATGCGGTTATTGATGTTGATATAAGCACAACAAAAGATAATATTGCTG
TATGCCTGCATAATCTAAACATAGATGGGATTCTATCAGGAACTGGTAGTATATTTGATT
ATACGTTTTCACAAATAAGAACAATGTTTAGAGTATTAGCATTTGATGGAACACCATATC
AAGGCACAAGACTGACTAGTTGGGATGAGATGGTTAAATCTTGCGCAAGAAGGGGGAATC
TATTAACAGCCGAGCTGAAAAATACTAAAGATAATAGTGATGCAATGAATAGTATTTATG
CAAGCATTGCATCTTATCACATGGTTGGAAGGGTTATTCTACAGTGCCTAAATATTTATC
GTTTGCAAGACTATAGGCGTCATACAGGTGATAATAAATCACCACTACAGCTATTAATAT
ATGATGGAATGCCAAACGAAAATCTGGTGGATGTGATAAATGATGTTCTAAATATAGATG
GGCTTGGACTAAATATTGATATAGGTTATACAAAATTAACTGAGGTTGTCGGATTGGCAA
ATCAGTATGATATACAATATTCATTTTACACAGCAACAAATAAAACTAAAGAACTTGATG
CAAGACTGGTTAGCACATCAACACAAATTACTAGAGACTATACGGAGTAA

Region Details

Region	2
Region Length	47.6Kb
Completeness(score)	intact(110)
Specific Keyword	tail,head,terminase,integrase
Region Position	1371596-1419202
# tRNA	0
# Total Proteins	82
# Phage Hit Proteins	62
# Hypothetical Proteins	0
Phage + Hypothetical Protein %	75.6%
# Bacterial Proteins	20
Attachment Site	no
# Phage Species	35
Most Common Phage Name(hit genes count)	PHAGE_Cronob_ENT47670_NC_019927(18) PHAGE_Salmon_64795_sal3_NC_031918(9) PHAGE_Mannhe_vB_MhS_587AP2_NC_028743(7) PHAGE_Mannhe_vB_MhS_535AP2_NC_028853(7) PHAGE_Aeromo_pIS4_A_NC_042037(7) PHAGE_Salmon_IME207_NC_031924(7) PHAGE_Edward_GF_2_NC_026611(7) PHAGE_Vibrio_pYD38_A_NC_021534(6) PHAGE_Entero_phi80_NC_021190(4) PHAGE_Cronob_phiES15_NC_018454(4) PHAGE_Salmon_SPN3UB_NC_019545(4) PHAGE_Salmon_BTP1_NC_042346(4) PHAGE_Escher_HK639_NC_016158(4) PHAGE_Entero_HK140_NC_019710(4) PHAGE_Entero_mEp237_NC_019704(4) PHAGE_Entero_mEp234_NC_019715(3) PHAGE_Entero_HK542_NC_019769(3) PHAGE_Entero_HK225_NC_019717(3) PHAGE_Entero_mEp213_NC_019720(3) PHAGE_Salmon_118970_sal4_NC_030919(3) PHAGE_Entero_c_1_NC_019706(3) PHAGE_Entero_SfI_NC_027339(3) PHAGE_Entero_HK630_NC_019723(3) PHAGE_Entero_DE3_NC_042057(2) PHAGE_Entero_HK629_NC_019711(2) PHAGE_Escher_HK75_NC_016160(2) PHAGE_Salmon_II_E1_NC_010495(2) PHAGE_Pseudo_JBD44_NC_030929(2) PHAGE_Salmon_HK620_NC_002730(2) PHAGE_Entero_VT2_Sakai_NC_000902(2) PHAGE_Salmon_SJ46_NC_031129(2) PHAGE_Entero_ES18_NC_006949(2) PHAGE_Escher_RCS47_NC_042128(2) PHAGE_Entero_lambda_NC_001416(2) PHAGE_Entero_HK106_NC_019768(2) PHAGE_Entero_HK544_NC_019767(2) PHAGE_Salmon_vB_SosS_Oslo_NC_018279(2) PHAGE_Stx2_c_1717_NC_011357(2) PHAGE_Salmon_SEN34_NC_028699(2) PHAGE_Salmon_SEN1_NC_029003(2) PHAGE_Entero_P1_NC_005856(2) PHAGE_Vibrio_pYD21_A_NC_020846(2) PHAGE_Stx2_c_86_NC_008464(2) PHAGE_Escher_phiV10_NC_007804(2) PHAGE_Entero_mEpX2_NC_019705(2) PHAGE_Sinorh_phiLM21_NC_029046(2) PHAGE_Pseudo_PS_1_NC_029066(2) PHAGE_Acinet_vB_AbaS_TRS1_NC_031098(1) PHAGE_Brucel_Tb_NC_019446(1) PHAGE_Synech_S_CRM01_NC_015569(1) PHAGE_Mycoba_32HC_NC_023602(1) PHAGE_Cronob_vB_CsaM_GAP32_NC_019401(1) PHAGE_Shigel_Sf6_NC_005344(1) PHAGE_Edward_PEi20_NC_028683(1) PHAGE_Pseudo_BS5_NC_031917(1) PHAGE_Salmon_SP_076_NC_021782(1) PHAGE_Pseudo_H101_NC_029094(1) PHAGE_Salmon_103203_sal5_NC_031946(1) PHAGE_Gordon_BritBrat_NC_030942(1) PHAGE_Escher_PA2_NC_028449(1) PHAGE_Entero_mEp235_NC_019708(1) PHAGE_Salmon_MA12_NC_031021(1) PHAGE_Entero_WPhi_NC_005056(1) PHAGE_Yersin_L_413C_NC_004745(1) PHAGE_Pseudo_phiPSA1_NC_024365(1) PHAGE_Entero_IME10_NC_019501(1) PHAGE_Salmon_f18SE_NC_028698(1) PHAGE_Entero_HK97_NC_002167(1) PHAGE_Phage_Gifsy_2_NC_010393(1) PHAGE_Salmon_SPN9CC_NC_017985(1) PHAGE_Stx2_II_NC_004914(1) PHAGE_Entero_YYZ_2008_NC_011356(1) PHAGE_Entero_186_NC_001317(1) PHAGE_Xantho_CP2_NC_020205(1) PHAGE_Escher_Pollock_NC_027381(1) PHAGE_Entero_NJ01_NC_018835(1) PHAGE_Entero_cdtI_NC_009514(1) PHAGE_Shigel_SfII_NC_021857(1) PHAGE_Phage_vB_EcoP_SU10_NC_027395(1) PHAGE_Escher_PA28_NC_041935(1) PHAGE_Escher_slur03_NC_042129(1) PHAGE_Pseudo_PAK_P4_NC_022986(1) PHAGE_Mycoba_Jabbawokkie_NC_022069(1) PHAGE_Salmon_Jersey_NC_021777(1) PHAGE_Salmon_ST64T_NC_004348(1) PHAGE_Escher_phage_NC_004913(1) PHAGE_Entero_Tyrion_NC_031077(1) PHAGE_Mycoba_Che9c_NC_004683(1) PHAGE_Escher_ECBP2_NC_018859(1) PHAGE_Stx2_vB_EcoP_24B_NC_027984(1) PHAGE_Salmon_SP_004_NC_021774(1) PHAGE_Shigel_SfIV_NC_022749(1) PHAGE_Klebsi_phiKO2_NC_005857(1) PHAGE_Shigel_Ss_VASD_NC_028685(1) PHAGE_Vibrio_CP_T1_NC_019457(1) PHAGE_Myxoco_Mx8_NC_003085(1) PHAGE_Gordon_Wizard_NC_030913(1) PHAGE_Pseudo_PAK_P1_NC_015294(1) PHAGE_Entero_VT2phi_272_NC_028656(1) PHAGE_Pseudo_PaoP5_NC_029083(1) PHAGE_Salmon_SP_058_NC_021772(1) PHAGE_Shigel_SP18_NC_014595(1) PHAGE_Serrat_CHI14_NC_041996(1) PHAGE_Shewan_3/49_NC_025466(1) PHAGE_Acinet_AP22_NC_017984(1) PHAGE_Xantho_vB_XveM_DIBBI_NC_017981(1) PHAGE_Entero_Phieco32_NC_010324(1) PHAGE_Pseudo_PAJU2_NC_011373(1) PHAGE_Salmon_vB_SemP_Emek_NC_018275(1) PHAGE_Rhizob_RR1_A_NC_021560(1) PHAGE_Pectob_CBB_NC_041878(1) PHAGE_Pseudo_H103_NC_028819(1) PHAGE_Escher_KBNP1711_NC_023593(1) PHAGE_Serrat_BF_NC_041917(1) PHAGE_Escher_TL_2011c_NC_019442(1) PHAGE_Salmon_ST160_NC_014900(1) PHAGE_Escher_slur01_NC_028831(1) PHAGE_Escher_P13374_NC_018846(1) PHAGE_Pseudo_PaP1_NC_019913(1) PHAGE_Acinet_phiAC_1_NC_028995(1)
First Most Common Phage #	18
First Most Common Phage %	21.95%
GC %	0

Region:	The number assigned to the region.
Region Length:	The length of the sequence of that region (in bp).
Completeness:	A prediction of whether the region contains a intact or incomplete prophage based on the above criteria.
Specific Keyword:	The specific phage-related keyword(s) found in protein name(s) in the region.
Region Position:	The start and end positions of the region on the bacterial chromosome.
# tRNA:	The number of tRNA genes present in the region.
# Total Proteins:	The number of ORFs present in the region.
# Phage Hit Proteins:	The number of proteins in the region with matches in the phage protein database.
# Hypothetical Proteins:	The number of hypothetical proteins in the region without a match in the database.
Phage + Hypothetical Protein %:	The combined percentage of phage proteins and hypothetical proteins in the region.
# Bacterial Proteins:	The number of proteins in the region with matches in the nrfilt database.
Attachment Site:	The putative phage attachment site.
# Phage Species:	The number of different phages that have similar proteins to those in the region.
Most Common Phage:	The phage(s) with the highest number of proteins most similar to those in the region.
First Most Common Phage #:	The highest number of proteins in a phage most similar to those in the region.
First Most Common Phage %:	The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins.
GC %:	The percentage of GC nucleotides of the region.

Region Details

Region	3
Region Length	37.8Kb
Completeness(score)	intact(150)
Specific Keyword	tail,head,portal,terminase,integrase
Region Position	2041989-2079832
# tRNA	1
# Total Proteins	45
# Phage Hit Proteins	33
# Hypothetical Proteins	0
Phage + Hypothetical Protein %	73.3%
# Bacterial Proteins	12
Attachment Site	no
# Phage Species	23
Most Common Phage Name(hit genes count)	PHAGE_Entero_mEp235_NC_019708(7) PHAGE_Klebsi_phiKO2_NC_005857(6) PHAGE_Yersin_PY54_NC_005069(6) PHAGE_Salmon_118970_sal3_NC_031940(4) PHAGE_Entero_cdtI_NC_009514(4) PHAGE_Pseudo_phi2_NC_030931(4) PHAGE_Entero_BP_4795_NC_004813(4) PHAGE_Phage_Gifsy_1_NC_010392(3) PHAGE_Phage_Gifsy_2_NC_010393(3) PHAGE_Entero_YYZ_2008_NC_011356(3) PHAGE_Cronob_ENT39118_NC_019934(3) PHAGE_Entero_mEp460_NC_019716(3) PHAGE_Pseudo_PMG1_NC_016765(3) PHAGE_Salmon_Fels_1_NC_010391(3) PHAGE_Stx2_c_1717_NC_011357(3) PHAGE_Entero_P4_NC_001609(2) PHAGE_Salmon_SEN4_NC_029015(2) PHAGE_Pseudo_D3_NC_002484(2) PHAGE_Burkho_phi1026b_NC_005284(2) PHAGE_Entero_ES18_NC_006949(2) PHAGE_Erwini_phiEt88_NC_015295(2) PHAGE_Entero_lambda_NC_001416(2) PHAGE_Paraco_Shpa_NC_041868(2) PHAGE_Entero_phiP27_NC_003356(2) PHAGE_Entero_HK633_NC_019719(2) PHAGE_Salmon_SEN5_NC_028701(2) PHAGE_Escher_vB_EcoM_ep3_NC_025430(1) PHAGE_Entero_DE3_NC_042057(1) PHAGE_Salmon_ST64B_NC_004313(1) PHAGE_Mycoba_Eureka_NC_041850(1) PHAGE_Shewan_1/41_NC_025458(1) PHAGE_Entero_phi80_NC_021190(1) PHAGE_Entero_HK629_NC_019711(1) PHAGE_Entero_HK542_NC_019769(1) PHAGE_Pseudo_phiPSA1_NC_024365(1) PHAGE_Pseudo_H66_NC_042342(1) PHAGE_Geobac_E2_NC_009552(1) PHAGE_Escher_vB_EcoM_ECOO78_NC_041926(1) PHAGE_Salmon_SPN3UB_NC_019545(1) PHAGE_Psychr_Psymv2_NC_023734(1) PHAGE_Burkho_KL3_NC_015266(1) PHAGE_Paenib_Willow_NC_041867(1) PHAGE_Stenot_S1_NC_011589(1) PHAGE_Paenib_HB10c2_NC_028758(1) PHAGE_Shigel_SfII_NC_021857(1) PHAGE_Burkho_phiE125_NC_003309(1) PHAGE_Escher_PA28_NC_041935(1) PHAGE_Lactoc_TP901_1_NC_002747(1) PHAGE_Escher_HK639_NC_016158(1) PHAGE_Salmon_SE1_NC_011802(1) PHAGE_Serrat_Eta_NC_021563(1) PHAGE_Rueger_DSS3_P1_NC_025428(1) PHAGE_Escher_RCS47_NC_042128(1) PHAGE_Azospi_Cd_NC_010355(1) PHAGE_Bacill_Pascal_NC_027372(1) PHAGE_Brocho_BL3_NC_015254(1) PHAGE_Entero_VT2phi_272_NC_028656(1) PHAGE_Pseudo_phi297_NC_016762(1) PHAGE_Entero_HK140_NC_019710(1) PHAGE_Pseudo_vB_PaeP_Tr60_Ab31_NC_023575(1) PHAGE_Paenib_Shelly_NC_041909(1) PHAGE_Pseudo_F116_NC_006552(1) PHAGE_Geobac_E3_NC_029073(1) PHAGE_Pseudo_PAJU2_NC_011373(1) PHAGE_Salmon_g341c_NC_013059(1) PHAGE_Lactoc_bIL285_NC_002666(1) PHAGE_Entero_ST104_NC_005841(1) PHAGE_Entero_Arya_NC_031048(1) PHAGE_Entero_UAB_Phi20_NC_031019(1) PHAGE_Entero_HK630_NC_019723(1) PHAGE_Entero_mEpX2_NC_019705(1) PHAGE_Salmon_epsilon34_NC_011976(1) PHAGE_Entero_Ec_L1_NC_042122(1)
First Most Common Phage #	6
First Most Common Phage %	15.55%
GC %	0

Region:	The number assigned to the region.
Region Length:	The length of the sequence of that region (in bp).
Completeness:	A prediction of whether the region contains a intact or incomplete prophage based on the above criteria.
Specific Keyword:	The specific phage-related keyword(s) found in protein name(s) in the region.
Region Position:	The start and end positions of the region on the bacterial chromosome.
# tRNA:	The number of tRNA genes present in the region.
# Total Proteins:	The number of ORFs present in the region.
# Phage Hit Proteins:	The number of proteins in the region with matches in the phage protein database.
# Hypothetical Proteins:	The number of hypothetical proteins in the region without a match in the database.
Phage + Hypothetical Protein %:	The combined percentage of phage proteins and hypothetical proteins in the region.
# Bacterial Proteins:	The number of proteins in the region with matches in the nrfilt database.
Attachment Site:	The putative phage attachment site.
# Phage Species:	The number of different phages that have similar proteins to those in the region.
Most Common Phage:	The phage(s) with the highest number of proteins most similar to those in the region.
First Most Common Phage #:	The highest number of proteins in a phage most similar to those in the region.
First Most Common Phage %:	The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins.
GC %:	The percentage of GC nucleotides of the region.

Region Details

Region	4
Region Length	35Kb
Completeness(score)	intact(130)
Specific Keyword	tail,terminase,capsid,portal,integrase
Region Position	2545183-2580226
# tRNA	1
# Total Proteins	44
# Phage Hit Proteins	33
# Hypothetical Proteins	0
Phage + Hypothetical Protein %	75%
# Bacterial Proteins	11
Attachment Site	no
# Phage Species	15
Most Common Phage Name(hit genes count)	PHAGE_Aeromo_phiO18P_NC_009542(18) PHAGE_Haemop_HP2_NC_003315(17) PHAGE_Haemop_HP1_NC_001697(16) PHAGE_Pasteu_F108_NC_008193(14) PHAGE_Vibrio_K139_NC_003313(11) PHAGE_Vibrio_8_NC_022747(10) PHAGE_Pseudo_phi3_NC_030940(10) PHAGE_Erwini_ENT90_NC_019932(4) PHAGE_Entero_186_NC_001317(4) PHAGE_Entero_PsP3_NC_005340(3) PHAGE_Salmon_SP_004_NC_021774(2) PHAGE_Entero_WPhi_NC_005056(2) PHAGE_Salmon_SEN1_NC_029003(2) PHAGE_Salmon_RE_2010_NC_019488(2) PHAGE_Salmon_Fels_2_NC_010463(2) PHAGE_Salisa_1_NC_017983(1) PHAGE_Salmon_ST64B_NC_004313(1) PHAGE_Erwini_phiEa104_NC_015292(1) PHAGE_Staphy_187_NC_007047(1) PHAGE_Staphy_SA13_NC_021863(1) PHAGE_Yersin_L_413C_NC_004745(1) PHAGE_Sodali_phiSG1_NC_007902(1) PHAGE_Synech_S_CBS3_NC_015465(1) PHAGE_Bacill_JBP901_NC_027352(1) PHAGE_Staphy_X2_NC_007065(1) PHAGE_Burkho_KS9_NC_013055(1) PHAGE_Erwini_phiEa21_4_NC_011811(1) PHAGE_Salmon_SEN4_NC_029015(1) PHAGE_Entero_fiAA91_ss_NC_022750(1) PHAGE_Vibrio_pYD38_A_NC_021534(1) PHAGE_Burkho_KL3_NC_015266(1) PHAGE_Polari_P12002S_NC_028763(1) PHAGE_Entero_Phieco32_NC_010324(1) PHAGE_Escher_pro147_NC_028896(1) PHAGE_Cyanop_KBS_S_2A_NC_020854(1) PHAGE_Vibrio_pYD21_A_NC_020846(1) PHAGE_Synech_S_CBS1_NC_016164(1) PHAGE_Salmon_SEN5_NC_028701(1) PHAGE_Burkho_phiE12_2_NC_009236(1) PHAGE_Erwini_vB_Eam_MM7_NC_041978(1) PHAGE_Salmon_118970_sal3_NC_031940(1) PHAGE_Staphy_phiETA3_NC_008799(1) PHAGE_Pseudo_119X_NC_007807(1) PHAGE_Lister_LP_101_NC_024387(1) PHAGE_Pseudo_PaP2_NC_005884(1) PHAGE_Phage_vB_EcoP_SU10_NC_027395(1) PHAGE_Aeromo_pIS4_A_NC_042037(1) PHAGE_Aeromo_pAh6_C_NC_025459(1) PHAGE_Entero_P2_NC_001895(1) PHAGE_Staphy_SA97_NC_029010(1)
First Most Common Phage #	17
First Most Common Phage %	40.9%
GC %	0

Region:	The number assigned to the region.
Region Length:	The length of the sequence of that region (in bp).
Completeness:	A prediction of whether the region contains a intact or incomplete prophage based on the above criteria.
Specific Keyword:	The specific phage-related keyword(s) found in protein name(s) in the region.
Region Position:	The start and end positions of the region on the bacterial chromosome.
# tRNA:	The number of tRNA genes present in the region.
# Total Proteins:	The number of ORFs present in the region.
# Phage Hit Proteins:	The number of proteins in the region with matches in the phage protein database.
# Hypothetical Proteins:	The number of hypothetical proteins in the region without a match in the database.
Phage + Hypothetical Protein %:	The combined percentage of phage proteins and hypothetical proteins in the region.
# Bacterial Proteins:	The number of proteins in the region with matches in the nrfilt database.
Attachment Site:	The putative phage attachment site.
# Phage Species:	The number of different phages that have similar proteins to those in the region.
Most Common Phage:	The phage(s) with the highest number of proteins most similar to those in the region.
First Most Common Phage #:	The highest number of proteins in a phage most similar to those in the region.
First Most Common Phage %:	The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins.
GC %:	The percentage of GC nucleotides of the region.

Region Details

Region	5
Region Length	24Kb
Completeness(score)	incomplete(40)
Specific Keyword	tail
Region Position	3855980-3880037
# tRNA	0
# Total Proteins	29
# Phage Hit Proteins	25
# Hypothetical Proteins	0
Phage + Hypothetical Protein %	86.2%
# Bacterial Proteins	4
Attachment Site	no
# Phage Species	5
Most Common Phage Name(hit genes count)	PHAGE_Burkho_BcepMu_NC_005882(21) PHAGE_Burkho_phiE255_NC_009237(20) PHAGE_Pseudo_JBD67_NC_042135(6) PHAGE_Rhizob_RR1_B_NC_021557(6) PHAGE_Pseudo_JBD18_NC_027986(5) PHAGE_Pseudo_B3_NC_006548(5) PHAGE_Vibrio_X29_NC_024369(5) PHAGE_Pseudo_JBD25_NC_027992(4) PHAGE_Pseudo_vB_PaeS_PM105_NC_028667(3) PHAGE_Bacter_Lily_NC_028841(3) PHAGE_Pseudo_PPpW_3_NC_023006(2) PHAGE_Burkho_KS5_NC_015265(2) PHAGE_Mannhe_phiMHaA1_NC_008201(2) PHAGE_Aeromo_25_NC_008208(1) PHAGE_Ralsto_RSA1_NC_009382(1) PHAGE_Aeromo_Aes012_NC_020879(1) PHAGE_Escher_D108_NC_013594(1) PHAGE_Escher_vB_EcoM_ECO1230_10_NC_027995(1) PHAGE_Entero_Mu_NC_000929(1) PHAGE_Aeromo_31_NC_007022(1) PHAGE_Ralsto_RSL1_NC_010811(1) PHAGE_Burkho_phi52237_NC_007145(1) PHAGE_Stenot_Smp131_NC_023588(1) PHAGE_Strept_Dp_1_NC_015274(1) PHAGE_Aeromo_phiAS4_NC_014635(1) PHAGE_Escher_vB_EcoM_ECOO78_NC_041926(1) PHAGE_Entero_PsP3_NC_005340(1) PHAGE_Entero_fiAA91_ss_NC_022750(1) PHAGE_Burkho_KL3_NC_015266(1) PHAGE_Bacill_BCD7_NC_019515(1) PHAGE_Salmon_RE_2010_NC_019488(1) PHAGE_Ralsto_RSY1_NC_025115(1) PHAGE_Burkho_KS14_NC_015273(1) PHAGE_Entero_P88_NC_026014(1) PHAGE_Salmon_Fels_2_NC_010463(1) PHAGE_Burkho_phiE202_NC_009234(1)
First Most Common Phage #	21
First Most Common Phage %	72.41%
GC %	0

Region:	The number assigned to the region.
Region Length:	The length of the sequence of that region (in bp).
Completeness:	A prediction of whether the region contains a intact or incomplete prophage based on the above criteria.
Specific Keyword:	The specific phage-related keyword(s) found in protein name(s) in the region.
Region Position:	The start and end positions of the region on the bacterial chromosome.
# tRNA:	The number of tRNA genes present in the region.
# Total Proteins:	The number of ORFs present in the region.
# Phage Hit Proteins:	The number of proteins in the region with matches in the phage protein database.
# Hypothetical Proteins:	The number of hypothetical proteins in the region without a match in the database.
Phage + Hypothetical Protein %:	The combined percentage of phage proteins and hypothetical proteins in the region.
# Bacterial Proteins:	The number of proteins in the region with matches in the nrfilt database.
Attachment Site:	The putative phage attachment site.
# Phage Species:	The number of different phages that have similar proteins to those in the region.
Most Common Phage:	The phage(s) with the highest number of proteins most similar to those in the region.
First Most Common Phage #:	The highest number of proteins in a phage most similar to those in the region.
First Most Common Phage %:	The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins.
GC %:	The percentage of GC nucleotides of the region.

Region Details

Region	6
Region Length	30.6Kb
Completeness(score)	intact(100)
Specific Keyword	protease,integrase,head,terminase
Region Position	4660542-4691240
# tRNA	0
# Total Proteins	57
# Phage Hit Proteins	44
# Hypothetical Proteins	0
Phage + Hypothetical Protein %	77.1%
# Bacterial Proteins	13
Attachment Site	no
# Phage Species	33
Most Common Phage Name(hit genes count)	PHAGE_Edward_GF_2_NC_026611(7) PHAGE_Salmon_BTP1_NC_042346(5) PHAGE_Cronob_phiES15_NC_018454(4) PHAGE_Cronob_ENT47670_NC_019927(4) PHAGE_Entero_HK106_NC_019768(4) PHAGE_Entero_mEp237_NC_019704(4) PHAGE_Entero_DE3_NC_042057(3) PHAGE_Entero_phi80_NC_021190(3) PHAGE_Entero_mEp234_NC_019715(3) PHAGE_Salmon_SPN3UB_NC_019545(3) PHAGE_Entero_HK225_NC_019717(3) PHAGE_Escher_HK639_NC_016158(3) PHAGE_Salmon_118970_sal4_NC_030919(3) PHAGE_Entero_lambda_NC_001416(3) PHAGE_Entero_HK022_NC_002166(3) PHAGE_Salmon_ST160_NC_014900(3) PHAGE_Mannhe_vB_MhS_587AP2_NC_028743(2) PHAGE_Shigel_Sf6_NC_005344(2) PHAGE_Entero_mEp235_NC_019708(2) PHAGE_Entero_HK629_NC_019711(2) PHAGE_Mannhe_vB_MhS_535AP2_NC_028853(2) PHAGE_Entero_HK542_NC_019769(2) PHAGE_Escher_HK75_NC_016160(2) PHAGE_Entero_HK97_NC_002167(2) PHAGE_Salmon_ST64T_NC_004348(2) PHAGE_Entero_HK140_NC_019710(2) PHAGE_Stx2_c_1717_NC_011357(2) PHAGE_Salmon_SEN34_NC_028699(2) PHAGE_Salmon_SEN1_NC_029003(2) PHAGE_Entero_c_1_NC_019706(2) PHAGE_Escher_phiV10_NC_007804(2) PHAGE_Entero_SfI_NC_027339(2) PHAGE_Pseudo_PS_1_NC_029066(2) PHAGE_Mycoba_32HC_NC_023602(1) PHAGE_Synech_S_CRM01_NC_015569(1) PHAGE_Brucel_Tb_NC_019446(1) PHAGE_Acinet_vB_AbaS_TRS1_NC_031098(1) PHAGE_Edward_PEi20_NC_028683(1) PHAGE_Cronob_vB_CsaM_GAP32_NC_019401(1) PHAGE_Pseudo_BS5_NC_031917(1) PHAGE_Salmon_SP_076_NC_021782(1) PHAGE_Salmon_103203_sal5_NC_031946(1) PHAGE_Pseudo_H101_NC_029094(1) PHAGE_Staphy_K_NC_005880(1) PHAGE_Salmon_MA12_NC_031021(1) PHAGE_Entero_WPhi_NC_005056(1) PHAGE_Yersin_L_413C_NC_004745(1) PHAGE_Entero_IME10_NC_019501(1) PHAGE_Pseudo_phiPSA1_NC_024365(1) PHAGE_Mycoba_Taj_NC_025433(1) PHAGE_Salmon_f18SE_NC_028698(1) PHAGE_Phage_Gifsy_2_NC_010393(1) PHAGE_Pseudo_PPpW_3_NC_023006(1) PHAGE_Entero_mEp213_NC_019720(1) PHAGE_Salmon_SPN9CC_NC_017985(1) PHAGE_Entero_YYZ_2008_NC_011356(1) PHAGE_Escher_Pollock_NC_027381(1) PHAGE_Entero_186_NC_001317(1) PHAGE_Entero_cdtI_NC_009514(1) PHAGE_Entero_NJ01_NC_018835(1) PHAGE_Phage_vB_EcoP_SU10_NC_027395(1) PHAGE_Entero_VT2_Sakai_NC_000902(1) PHAGE_Aeromo_pIS4_A_NC_042037(1) PHAGE_Escher_PA28_NC_041935(1) PHAGE_Pseudo_PAK_P4_NC_022986(1) PHAGE_Escher_slur03_NC_042129(1) PHAGE_Salmon_SJ46_NC_031129(1) PHAGE_Salmon_Jersey_NC_021777(1) PHAGE_Mycoba_Jabbawokkie_NC_022069(1) PHAGE_Staphy_G1_NC_007066(1) PHAGE_Escher_phage_NC_004913(1) PHAGE_Mycoba_Che9c_NC_004683(1) PHAGE_Entero_Tyrion_NC_031077(1) PHAGE_Salmon_SE1_NC_011802(1) PHAGE_Escher_ECBP2_NC_018859(1) PHAGE_Salmon_SP_004_NC_021774(1) PHAGE_Escher_RCS47_NC_042128(1) PHAGE_Vibrio_CP_T1_NC_019457(1) PHAGE_Myxoco_Mx8_NC_003085(1) PHAGE_Gordon_Wizard_NC_030913(1) PHAGE_Pseudo_PAK_P1_NC_015294(1) PHAGE_Entero_BP_4795_NC_004813(1) PHAGE_Pseudo_PaoP5_NC_029083(1) PHAGE_Salmon_SP_058_NC_021772(1) PHAGE_Shigel_SP18_NC_014595(1) PHAGE_Shewan_3/49_NC_025466(1) PHAGE_Serrat_CHI14_NC_041996(1) PHAGE_Acinet_AP22_NC_017984(1) PHAGE_Vibrio_pYD38_A_NC_021534(1) PHAGE_Xantho_vB_XveM_DIBBI_NC_017981(1) PHAGE_Entero_Phieco32_NC_010324(1) PHAGE_Entero_P1_NC_005856(1) PHAGE_Pseudo_PAJU2_NC_011373(1) PHAGE_Salmon_vB_SemP_Emek_NC_018275(1) PHAGE_Rhizob_RR1_A_NC_021560(1) PHAGE_Salmon_g341c_NC_013059(1) PHAGE_Pectob_CBB_NC_041878(1) PHAGE_Stx2_c_86_NC_008464(1) PHAGE_Salmon_IME207_NC_031924(1) PHAGE_Escher_KBNP1711_NC_023593(1) PHAGE_Serrat_BF_NC_041917(1) PHAGE_Entero_ST104_NC_005841(1) PHAGE_Entero_HK630_NC_019723(1) PHAGE_Salmon_epsilon34_NC_011976(1) PHAGE_Pseudo_PaP1_NC_019913(1) PHAGE_Staphy_JD007_NC_019726(1) PHAGE_Acinet_phiAC_1_NC_028995(1)
First Most Common Phage #	5
First Most Common Phage %	12.28%
GC %	0

Region:	The number assigned to the region.
Region Length:	The length of the sequence of that region (in bp).
Completeness:	A prediction of whether the region contains a intact or incomplete prophage based on the above criteria.
Specific Keyword:	The specific phage-related keyword(s) found in protein name(s) in the region.
Region Position:	The start and end positions of the region on the bacterial chromosome.
# tRNA:	The number of tRNA genes present in the region.
# Total Proteins:	The number of ORFs present in the region.
# Phage Hit Proteins:	The number of proteins in the region with matches in the phage protein database.
# Hypothetical Proteins:	The number of hypothetical proteins in the region without a match in the database.
Phage + Hypothetical Protein %:	The combined percentage of phage proteins and hypothetical proteins in the region.
# Bacterial Proteins:	The number of proteins in the region with matches in the nrfilt database.
Attachment Site:	The putative phage attachment site.
# Phage Species:	The number of different phages that have similar proteins to those in the region.
Most Common Phage:	The phage(s) with the highest number of proteins most similar to those in the region.
First Most Common Phage #:	The highest number of proteins in a phage most similar to those in the region.
First Most Common Phage %:	The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins.
GC %:	The percentage of GC nucleotides of the region.

Intact (score > 90)

Questionable (score 70-90)

Incomplete (score < 70)

Region:	The number assigned to the region.
Region Length:	The length of the sequence of that region (in bp).
Completeness:	A prediction of whether the region contains a intact or incomplete prophage based on the above criteria.
Score:	The score of the region based on the above criteria.
# Total Proteins:	The number of ORFs present in the region.
Region Position:	The start and end positions of the region on the bacterial chromosome.
Most Common Phage:	The phage(s) with the highest number of proteins most similar to those in the region.
GC %:	The percentage of GC nucleotides of the region.

Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:

If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.

Method 2:

If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).

Method 3:

If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
If the size of the region is greater than 30 Kb, the score will be increased by 10.
If there are at least 40 proteins in the region, the score will be increased by 10.
If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.

Compared the total score of method 2 with the total score of method 3, the bigger one is chosen as the total score of the region.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.

gi|00000000|ref|UGHO01000001.1| Hafnia alvei strain NCTC8535 genome assembly, contig: 265322, gc%: 48.97%

Download details as .txt file: detail.txt

Hits against Virus and Prophage Database

Hits against Bacterial Database or GenBank File

Region 1, total 16 CDS

#	CDS Position	BLAST Hit	E-Value	Sequence
1	376..630	PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC8535_00002; phage(gi431810499)	5.18e-24	Show
2	637..810	PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC8535_00003; phage(gi431810525)	1.85e-23	Show
3	1077..2123	PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC8535_00004; phage(gi431810503)	1.99e-136	Show
4	2181..2438	Uncharacterised protein; NCTC8535_00005	0.0	Show
5	3685..4065	PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC8535_00006; phage(gi431810530)	9.49e-24	Show
6	4133..4252	Uncharacterised protein; NCTC8535_00007	0.0	Show
7	4240..4884	PHAGE_Cronob_ENT47670_NC_019927: major tail subunit; NCTC8535_00008; phage(gi431810520)	7.05e-27	Show
8	4940..5647	PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC8535_00009; phage(gi431810508)	4.07e-68	Show
9	5693..6937	PHAGE_Vibrio_pYD38_A_NC_021534: tail length tape measure protein; NCTC8535_00010; phage(gi514051037)	1.88e-107	Show
10	7027..8895	PHAGE_Vibrio_pYD38_A_NC_021534: tail length tape measure protein; NCTC8535_00011; phage(gi514051037)	3.42e-72	Show
11	8906..9133	Uncharacterised protein; NCTC8535_00012	0.0	Show
12	9172..9669	PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC8535_00013; phage(gi431810519)	8.51e-70	Show
13	9672..10142	PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC8535_00014; phage(gi431810518)	1.34e-59	Show
14	10146..10577	PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC8535_00015; phage(gi431810526)	4.52e-57	Show
15	10525..12990	PHAGE_Cronob_ENT47670_NC_019927: putative tail protein; NCTC8535_00016; phage(gi431810495)	0.0	Show
16	13047..14285	PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC8535_00017; phage(gi431810496)	1.86e-45	Show

Region 2, total 82 CDS

#	CDS Position	BLAST Hit	E-Value	Sequence
1	complement(1371596..1371973)	PHAGE_Klebsi_phiKO2_NC_005857: Gp23; NCTC8535_01331; phage(gi46402109)	6.32e-33	Show
2	complement(1372229..1373236)	Uncharacterised protein; NCTC8535_01332	0.0	Show
3	complement(1373236..1374912)	PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC8535_01333; phage(gi431810496)	7.66e-45	Show
4	complement(1374969..1377434)	PHAGE_Cronob_ENT47670_NC_019927: putative tail protein; NCTC8535_01334; phage(gi431810495)	0.0	Show
5	complement(1377382..1377813)	PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC8535_01335; phage(gi431810526)	4.52e-57	Show
6	complement(1377817..1378287)	PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC8535_01336; phage(gi431810518)	1.34e-59	Show
7	complement(1378290..1378787)	PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC8535_01337; phage(gi431810519)	8.51e-70	Show
8	complement(1378826..1379053)	Uncharacterised protein; NCTC8535_01338	0.0	Show
9	complement(1379064..1382267)	PHAGE_Vibrio_pYD38_A_NC_021534: tail length tape measure protein; NCTC8535_01339; phage(gi514051037)	9.50e-101	Show
10	complement(1382313..1383020)	PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC8535_01340; phage(gi431810508)	4.07e-68	Show
11	complement(1383076..1383828)	PHAGE_Cronob_ENT47670_NC_019927: major tail subunit; NCTC8535_01341; phage(gi431810520)	8.77e-40	Show
12	complement(1383897..1384277)	PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC8535_01342; phage(gi431810530)	9.49e-24	Show
13	complement(1384274..1384645)	PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC8535_01343; phage(gi431810532)	7.19e-42	Show
14	complement(1384647..1384991)	PHAGE_Mannhe_vB_MhS_535AP2_NC_028853: hypothetical protein; NCTC8535_01344; phage(gi971749596)	4.54e-40	Show
15	complement(1384988..1385158)	PHAGE_Salmon_vB_SosS_Oslo_NC_018279: hypothetical protein; NCTC8535_01345; phage(gi399528768)	3.47e-18	Show
16	complement(1385158..1385538)	PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC8535_01346; phage(gi431810531)	1.02e-40	Show
17	complement(1385541..1385798)	Uncharacterised protein; NCTC8535_01347	0.0	Show
18	complement(1385810..1386901)	PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC8535_01348; phage(gi431810503)	0.0	Show
19	complement(1386913..1387344)	PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC8535_01349; phage(gi431810525)	6.88e-70	Show
20	complement(1387351..1388694)	PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC8535_01350; phage(gi431810499)	6.03e-180	Show
21	complement(1388765..1388959)	Uncharacterised protein; NCTC8535_01351	0.0	Show
22	complement(1389006..1389989)	PHAGE_Cronob_ENT47670_NC_019927: phage head morphogenesis; NCTC8535_01352; phage(gi431810507)	4.34e-159	Show
23	complement(1389940..1391406)	PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC8535_01353; phage(gi431810500)	0.0	Show
24	complement(1391417..1392889)	PHAGE_Cronob_phiES15_NC_018454: terminase large subunit; NCTC8535_01354; phage(gi401817592)	0.0	Show
25	complement(1392889..1393491)	PHAGE_Edward_GF_2_NC_026611: putative terminase small subunit; NCTC8535_01355; phage(gi764162248)	2.48e-93	Show
26	complement(1393496..1393696)	Uncharacterised protein; NCTC8535_01356	0.0	Show
27	complement(1393689..1393799)	Uncharacterised protein; NCTC8535_01357	0.0	Show
28	complement(1394281..1394982)	PHAGE_Cronob_ENT47670_NC_019927: phage antirepressor protein; NCTC8535_01358; phage(gi431810509)	1.44e-143	Show
29	complement(1395174..1395305)	Uncharacterised protein; NCTC8535_01359	0.0	Show
30	complement(1395315..1395764)	PHAGE_Entero_SfI_NC_027339: Rz protein; NCTC8535_01360; phage(gi849250282)	1.25e-24	Show
31	complement(1395761..1396255)	PHAGE_Salmon_SPN9CC_NC_017985: phage lysozyme; NCTC8535_01361; phage(gi389060531)	4.30e-71	Show
32	complement(1396227..1396496)	PHAGE_Entero_HK225_NC_019717: holin; NCTC8535_01362; phage(gi428782443)	1.83e-41	Show
33	1396615..1396809	Uncharacterised protein; NCTC8535_01363	0.0	Show
34	complement(1397056..1397544)	PHAGE_Salmon_118970_sal4_NC_030919: hypothetical protein; NCTC8535_01364; phage(gi100037)	8.34e-88	Show
35	complement(1397541..1397750)	Uncharacterised protein; NCTC8535_01365	0.0	Show
36	complement(1397747..1398334)	PHAGE_Edward_GF_2_NC_026611: putative recombination endonuclease; NCTC8535_01366; phage(gi764162320)	9.47e-82	Show
37	complement(1398337..1398534)	PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC8535_01367; phage(gi764162319)	8.15e-12	Show
38	complement(1398542..1399300)	PHAGE_Entero_SfI_NC_027339: hypothetical protein; NCTC8535_01368; phage(gi849250256)	2.22e-149	Show
39	complement(1399309..1399731)	PHAGE_Rhizob_RR1_A_NC_021560: hypothetical protein; NCTC8535_01369; phage(gi514231507)	1.20e-31	Show
40	complement(1399728..1400168)	PHAGE_Cronob_ENT47670_NC_019927: putative ninB protein; NCTC8535_01370; phage(gi431810524)	4.43e-60	Show
41	complement(1400171..1400359)	PHAGE_Entero_NJ01_NC_018835: hypothetical protein; NCTC8535_01371; phage(gi410490954)	1.28e-10	Show
42	complement(1400359..1400595)	PHAGE_Salmon_ST64T_NC_004348: hypothetical protein; NCTC8535_01372; phage(gi24371564)	6.20e-12	Show
43	complement(1400607..1400849)	PHAGE_Edward_PEi20_NC_028683: hypothetical protein; NCTC8535_01373; phage(gi966200079)	6.75e-23	Show
44	complement(1400842..1401105)	Uncharacterised protein; NCTC8535_01374	0.0	Show
45	complement(1401105..1401302)	Uncharacterised protein; NCTC8535_01375	0.0	Show
46	complement(1401299..1402006)	PHAGE_Cronob_phiES15_NC_018454: putative replication protein P; NCTC8535_01376; phage(gi401817577)	1.26e-81	Show
47	complement(1402003..1402911)	PHAGE_Entero_mEp237_NC_019704: DNA replication protein O; NCTC8535_01377; phage(gi435439307)	1.18e-142	Show
48	complement(1402908..1403315)	PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC8535_01378; phage(gi356870653)	1.09e-78	Show
49	complement(1403342..1403641)	PHAGE_Stx2_c_1717_NC_011357: CII protein; NCTC8535_01379; phage(gi209447147)	3.67e-41	Show
50	complement(1403747..1403947)	PHAGE_Entero_HK140_NC_019710: prophage antirepressor; NCTC8535_01380; phage(gi428781989)	1.16e-31	Show
51	1404046..1404777	PHAGE_Escher_P13374_NC_018846: prophage repressor CI; NCTC8535_01381; phage(gi410491627)	5.55e-85	Show
52	1404876..1405157	PHAGE_Entero_HK544_NC_019767: hypothetical protein; NCTC8535_01382; phage(gi428783256)	1.05e-19	Show
53	complement(1405142..1405300)	Uncharacterised protein; NCTC8535_01383	0.0	Show
54	1405401..1405709	PHAGE_Entero_HK544_NC_019767: hypothetical protein; NCTC8535_01384; phage(gi428783255)	5.80e-09	Show
55	complement(1405745..1406119)	Uncharacterised protein; NCTC8535_01385	0.0	Show
56	1406552..1406809	PHAGE_Salmon_HK620_NC_002730: antitermination protein N; NCTC8535_01386; phage(gi13559841)	2.66e-14	Show
57	1406809..1407363	PHAGE_Salmon_MA12_NC_031021: membrane-associated initiation of head vertex; NCTC8535_01387; phage(gi100034)	4.67e-34	Show
58	complement(1407445..1407855)	PHAGE_Entero_HK225_NC_019717: hypothetical protein; NCTC8535_01388; phage(gi428782442)	2.63e-63	Show
59	1408036..1408236	Uncharacterised protein; NCTC8535_01389	0.0	Show
60	1408247..1408600	Uncharacterised protein; NCTC8535_01390	0.0	Show
61	1408645..1409277	PHAGE_Entero_HK542_NC_019769: hypothetical protein; NCTC8535_01391; phage(gi428783378)	5.82e-46	Show
62	1409483..1409788	PHAGE_Xantho_CP2_NC_020205: hypothetical protein; NCTC8535_01392; phage(gi448245209)	1.88e-27	Show
63	1409823..1410200	Uncharacterised protein; NCTC8535_01393	0.0	Show
64	1410561..1411562	PHAGE_Entero_c_1_NC_019706: hypothetical protein; NCTC8535_01394; phage(gi428781776)	5.17e-86	Show
65	1411585..1411698	Uncharacterised protein; NCTC8535_01395	0.0	Show
66	1411817..1412023	Uncharacterised protein; NCTC8535_01396	0.0	Show
67	1412020..1412190	PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC8535_01397; phage(gi764162296)	1.57e-06	Show
68	1412168..1412839	PHAGE_Cronob_vB_CsaM_GAP32_NC_019401: putative DNA polymerase III epsilon subunit; NCTC8535_01398; phage(gi414087193)	3.67e-16	Show
69	1412844..1413710	PHAGE_Acinet_vB_AbaS_TRS1_NC_031098: RegA; NCTC8535_01399; phage(gi100039)	2.73e-89	Show
70	1413711..1414211	PHAGE_Xantho_vB_XveM_DIBBI_NC_017981: single-stranded DNA-binding protein; NCTC8535_01400; phage(gi389060431)	7.22e-77	Show
71	1414224..1414547	Uncharacterised protein; NCTC8535_01401	0.0	Show
72	1414557..1414868	PHAGE_Escher_HK639_NC_016158: eae-like protein; NCTC8535_01402; phage(gi356870657)	3.93e-21	Show
73	1414865..1415089	PHAGE_Acinet_AP22_NC_017984: hypothetical protein; NCTC8535_01403; phage(gi388570774)	2.30e-08	Show
74	1415079..1415468	PHAGE_Pseudo_PAJU2_NC_011373: hypothetical protein; NCTC8535_01404; phage(gi209552470)	1.68e-23	Show
75	1415461..1415691	PHAGE_Escher_phiV10_NC_007804: hypothetical protein; NCTC8535_01405; phage(gi89152463)	2.96e-30	Show
76	1415684..1416013	Uncharacterised protein; NCTC8535_01406	0.0	Show
77	1416191..1416472	PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC8535_01407; phage(gi100007)	1.14e-28	Show
78	1416573..1416857	PHAGE_Entero_186_NC_001317: Orf83; NCTC8535_01408; phage(gi9634094)	3.90e-23	Show
79	1416835..1417074	PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC8535_01409; phage(gi764162286)	4.82e-12	Show
80	1417071..1417613	PHAGE_Stx2_c_86_NC_008464: DNA N-6-adenine methyltransferase Dam; NCTC8535_01410; phage(gi116222066)	3.81e-76	Show
81	1417812..1418162	PHAGE_Entero_c_1_NC_019706: excisionase; NCTC8535_01411; phage(gi428781760)	9.95e-26	Show
82	1418171..1419202	PHAGE_Cronob_ENT47670_NC_019927: integrase; NCTC8535_01412; phage(gi431810502)	1.18e-158	Show

Region 3, total 46 CDS

#	CDS Position	BLAST Hit	E-Value	Sequence
1	complement(2041989..2043719)	PHAGE_Entero_YYZ_2008_NC_011356: putative tail protein; NCTC8535_01970; phage(gi209427793)	3.05e-43	Show
2	complement(2043787..2044782)	PHAGE_Yersin_PY54_NC_005069: hypothetical protein; NCTC8535_01971; phage(gi33770532)	4.90e-08	Show
3	complement(2044803..2047898)	PHAGE_Stx2_c_1717_NC_011357: putative tail fiber component J; NCTC8535_01972; phage(gi209447196)	0.0	Show
4	complement(2047984..2048514)	PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpI homolog; NCTC8535_01973; phage(gi169257316)	8.29e-53	Show
5	complement(2048499..2049263)	PHAGE_Entero_mEp460_NC_019716: tail fiber component; NCTC8535_01974; phage(gi428782332)	1.70e-109	Show
6	complement(2049277..2049975)	PHAGE_Entero_lambda_NC_001416: tail component; NCTC8535_01975; phage(gi9626261)	3.42e-107	Show
7	complement(2049984..2050313)	PHAGE_Entero_cdtI_NC_009514: putative minor tail protein; NCTC8535_01976; phage(gi148609396)	4.99e-33	Show
8	complement(2050372..2050719)	PHAGE_Salmon_SEN5_NC_028701: hypothetical protein; NCTC8535_01977; phage(gi966201587)	6.25e-06	Show
9	complement(2050775..2053756)	PHAGE_Entero_phi80_NC_021190: tail length tape measure protein precursor; NCTC8535_01978; phage(gi824479595)	2.02e-31	Show
10	complement(2053982..2054329)	PHAGE_Klebsi_phiKO2_NC_005857: putative tail assembly chaperone; NCTC8535_01979; phage(gi46402099)	5.93e-16	Show
11	complement(2054329..2054805)	PHAGE_Klebsi_phiKO2_NC_005857: major tail shaft subunit; NCTC8535_01980; phage(gi46402098)	3.32e-31	Show
12	complement(2054849..2055259)	PHAGE_Klebsi_phiKO2_NC_005857: Gp11; NCTC8535_01981; phage(gi46402097)	1.63e-49	Show
13	complement(2055263..2055643)	PHAGE_Yersin_PY54_NC_005069: hypothetical protein; NCTC8535_01982; phage(gi33770518)	3.78e-49	Show
14	complement(2055624..2055968)	PHAGE_Paenib_HB10c2_NC_028758: putative head-tail adaptor; NCTC8535_01983; phage(gi971740656)	6.66e-07	Show
15	complement(2055965..2056291)	PHAGE_Entero_mEp235_NC_019708: head-tail connector II; NCTC8535_01984; phage(gi428781817)	7.93e-50	Show
16	complement(2056301..2056492)	PHAGE_Entero_mEp235_NC_019708: head-tail connector I; NCTC8535_01985; phage(gi428781816)	5.70e-13	Show
17	complement(2056547..2057770)	PHAGE_Entero_mEp235_NC_019708: major head subunit; NCTC8535_01986; phage(gi428781815)	0.0	Show
18	complement(2057781..2058638)	PHAGE_Entero_mEp235_NC_019708: head maturation protease; NCTC8535_01987; phage(gi428781814)	7.21e-157	Show
19	complement(2058653..2059957)	PHAGE_Entero_mEp235_NC_019708: portal protein; NCTC8535_01988; phage(gi428781813)	0.0	Show
20	complement(2059957..2061702)	PHAGE_Paraco_Shpa_NC_041868: hypothetical protein; NCTC8535_01989; phage(gi100003)	7.69e-161	Show
21	complement(2061653..2062120)	PHAGE_Entero_mEp235_NC_019708: terminase small subunit; NCTC8535_01990; phage(gi428781811)	3.82e-35	Show
22	complement(2062185..2062550)	PHAGE_Cronob_ENT39118_NC_019934: HNH nuclease; NCTC8535_01991; phage(gi431811078)	1.01e-47	Show
23	complement(2062547..2063074)	Uncharacterised protein; NCTC8535_01992	0.0	Show
24	complement(2063198..2063428)	Uncharacterised protein; NCTC8535_01993	0.0	Show
25	complement(2063526..2064035)	PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; NCTC8535_01994; phage(gi16765210)	1.08e-11	Show
26	complement(2064032..2064646)	PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; NCTC8535_01995; phage(gi100131)	1.10e-120	Show
27	complement(2064656..2064982)	PHAGE_Erwini_phiEt88_NC_015295: holin; NCTC8535_01996; phage(gi327198627)	6.30e-19	Show
28	2066222..2066515	Domain of uncharacterised function (DUF1883); NCTC8535_01997	0.0	Show
29	complement(2066575..2066652)	tRNA	0.0	Show
30	complement(2066956..2067735)	PHAGE_Cronob_ENT39118_NC_019934: antitermination protein; NCTC8535_01999; phage(gi431811056)	1.34e-93	Show
31	complement(2067884..2068225)	PHAGE_Brocho_BL3_NC_015254: gp52; NCTC8535_02000; phage(gi327409444)	3.35e-08	Show
32	complement(2068225..2070927)	PHAGE_Entero_P4_NC_001609: DNA primase; NCTC8535_02001; phage(gi9627512)	4.57e-36	Show
33	complement(2070920..2071276)	Uncharacterised protein; NCTC8535_02002	0.0	Show
34	complement(2071286..2071906)	PHAGE_Entero_phiP27_NC_003356: hypothetical protein; NCTC8535_02003; phage(gi18249870)	8.57e-20	Show
35	complement(2071906..2072274)	Uncharacterised protein; NCTC8535_02004	0.0	Show
36	complement(2072354..2072659)	Uncharacterised protein; NCTC8535_02005	0.0	Show
37	complement(2072656..2073447)	PHAGE_Salmon_SPN3UB_NC_019545: putative antirepressor family protein; NCTC8535_02006; phage(gi423262399)	1.42e-62	Show
38	complement(2073440..2073673)	Uncharacterised protein; NCTC8535_02007	0.0	Show
39	complement(2073666..2073836)	Uncharacterised protein; NCTC8535_02008	0.0	Show
40	complement(2073829..2075601)	Uncharacterised protein; NCTC8535_02009	0.0	Show
41	complement(2075594..2076217)	PHAGE_Geobac_E3_NC_029073: toxin-antitoxin-like protein; NCTC8535_02010; phage(gi985758520)	3.08e-27	Show
42	complement(2076214..2076729)	Uncharacterised protein; NCTC8535_02011	0.0	Show
43	complement(2076828..2077025)	PHAGE_Entero_P4_NC_001609: transcriptional regulator; NCTC8535_02012; phage(gi9627517)	1.02e-09	Show
44	complement(2077251..2077718)	Uncharacterised protein; NCTC8535_02013	0.0	Show
45	complement(2077719..2078252)	Uncharacterised protein; NCTC8535_02014	0.0	Show
46	complement(2078633..2079832)	PROPHAGE_Escher_CFT073: putative prophage integrase; NCTC8535_02015; phage(gi26250313)	0.0	Show

Region 4, total 45 CDS

#	CDS Position	BLAST Hit	E-Value	Sequence
1	2545183..2547015	PHAGE_Synech_S_CBS3_NC_015465: group 2 RNA polymerase sigma factor; NCTC8535_02439; phage(gi331028036)	3.11e-36	Show
2	complement(2547084..2547581)	G/U mismatch-specific DNA glycosylase; NCTC8535_02440	0.0	Show
3	2547721..2547796	tRNA	0.0	Show
4	2547947..2548981	Uncharacterised protein; NCTC8535_02442	0.0	Show
5	complement(2549512..2551188)	PHAGE_Haemop_HP2_NC_003315: orf35; NCTC8535_02443; phage(gi17981851)	8.86e-155	Show
6	complement(2551192..2551737)	PHAGE_Haemop_HP2_NC_003315: orf34; NCTC8535_02444; phage(gi17981850)	3.93e-30	Show
7	complement(2551709..2552434)	PHAGE_Haemop_HP2_NC_003315: orf33; NCTC8535_02445; phage(gi17981849)	5.49e-19	Show
8	complement(2552424..2552948)	PHAGE_Sodali_phiSG1_NC_007902: putative phage tail fiber assembly protein; NCTC8535_02446; phage(gi89886004)	8.04e-35	Show
9	complement(2552963..2555323)	PHAGE_Haemop_HP2_NC_003315: tail fibers; NCTC8535_02447; phage(gi17981847)	2.20e-76	Show
10	complement(2555325..2555924)	PHAGE_Haemop_HP2_NC_003315: orf30; NCTC8535_02448; phage(gi17981846)	8.48e-59	Show
11	complement(2555917..2557101)	PHAGE_Haemop_HP2_NC_003315: orf29; NCTC8535_02449; phage(gi17981845)	3.11e-149	Show
12	complement(2557098..2557427)	PHAGE_Haemop_HP2_NC_003315: orf28; NCTC8535_02450; phage(gi17981844)	5.32e-33	Show
13	complement(2557424..2559640)	PHAGE_Haemop_HP2_NC_003315: orf27; NCTC8535_02451; phage(gi17981843)	1.43e-86	Show
14	complement(2559828..2560091)	PHAGE_Haemop_HP2_NC_003315: orf26; NCTC8535_02452; phage(gi17981842)	2.85e-20	Show
15	complement(2560226..2560588)	PHAGE_Erwini_phiEa21_4_NC_011811: hypothetical protein; NCTC8535_02453; phage(gi219681271)	2.73e-11	Show
16	complement(2560588..2560929)	PHAGE_Pseudo_PaP2_NC_005884: hypothetical protein; NCTC8535_02454; phage(gi48697087)	7.44e-32	Show
17	complement(2560926..2561216)	PHAGE_Burkho_KS9_NC_013055: holin gp22; NCTC8535_02455; phage(gi255033753)	8.58e-23	Show
18	complement(2561226..2561681)	PHAGE_Aeromo_phiO18P_NC_009542: putative tail tube protein; NCTC8535_02456; phage(gi148727159)	6.60e-63	Show
19	complement(2561678..2562808)	PHAGE_Haemop_HP2_NC_003315: tail sheath; NCTC8535_02457; phage(gi17981837)	2.60e-138	Show
20	complement(2562805..2563515)	PHAGE_Haemop_HP2_NC_003315: orf22; NCTC8535_02458; phage(gi17981836)	7.23e-15	Show
21	complement(2563512..2564012)	PHAGE_Haemop_HP2_NC_003315: orf21; NCTC8535_02459; phage(gi17981835)	9.43e-12	Show
22	complement(2564009..2564461)	PHAGE_Haemop_HP2_NC_003315: packaging protein; NCTC8535_02460; phage(gi17981834)	2.31e-33	Show
23	complement(2564557..2565255)	PHAGE_Aeromo_phiO18P_NC_009542: terminase endonuclease subunit; NCTC8535_02461; phage(gi148727154)	3.99e-72	Show
24	complement(2565259..2566284)	PHAGE_Vibrio_8_NC_022747: capsid protein; NCTC8535_02462; phage(gi557307497)	3.10e-115	Show
25	complement(2566336..2567163)	PHAGE_Haemop_HP2_NC_003315: capsid-scaffolding protein; NCTC8535_02463; phage(gi17981831)	1.06e-34	Show
26	2567321..2569093	PHAGE_Haemop_HP2_NC_003315: terminase ATPase subunit; NCTC8535_02464; phage(gi17981830)	0.0	Show
27	2569090..2570118	PHAGE_Haemop_HP2_NC_003315: portal vertex protein; NCTC8535_02465; phage(gi17981829)	7.57e-108	Show
28	2570169..2570435	PHAGE_Vibrio_K139_NC_003313: zinc-finger protein; NCTC8535_02466; phage(gi17975123)	3.30e-27	Show
29	complement(2570415..2570618)	Uncharacterised protein; NCTC8535_02467	0.0	Show
30	complement(2570727..2572787)	PHAGE_Salmon_SEN5_NC_028701: replication protein; NCTC8535_02468; phage(gi966201551)	5.92e-172	Show
31	complement(2572787..2573080)	Uncharacterised protein; NCTC8535_02469	0.0	Show
32	complement(2573073..2573375)	PHAGE_Vibrio_pYD38_A_NC_021534: hypothetical protein; NCTC8535_02470; phage(gi514051022)	5.05e-16	Show
33	complement(2573366..2573605)	Protein of uncharacterised function (DUF2732); NCTC8535_02471	0.0	Show
34	complement(2573685..2574092)	Uncharacterised protein; NCTC8535_02472	0.0	Show
35	complement(2574102..2574482)	Uncharacterised protein; NCTC8535_02473	0.0	Show
36	complement(2574485..2574673)	Protein of uncharacterised function (DUF2724); NCTC8535_02474	0.0	Show
37	complement(2574686..2575189)	PHAGE_Salmon_Fels_2_NC_010463: bacteriophage regulatory protein CII; NCTC8535_02475; phage(gi169936061)	2.72e-57	Show
38	complement(2575220..2575441)	PHAGE_Haemop_HP2_NC_003315: orf2(S)cox; NCTC8535_02476; phage(gi17981819)	4.04e-05	Show
39	2575550..2576140	PHAGE_Erwini_ENT90_NC_019932: CI repressor protein; NCTC8535_02477; phage(gi431810951)	6.28e-39	Show
40	2576164..2576727	PHAGE_Staphy_X2_NC_007065: ORF015; NCTC8535_02478; phage(gi66394685)	2.23e-23	Show
41	2576729..2577745	PHAGE_Erwini_ENT90_NC_019932: phage integrase family protein; NCTC8535_02479; phage(gi431810942)	1.03e-164	Show
42	2577749..2578474	Uncharacterised protein; NCTC8535_02480	0.0	Show
43	complement(2578723..2579253)	Isochorismatase family protein yecD; NCTC8535_02481	0.0	Show
44	2579457..2579615	Uncharacterised protein; NCTC8535_02482	0.0	Show
45	complement(2579612..2580226)	PHAGE_Salmon_SP_004_NC_021774: hypothetical protein; NCTC8535_02483; phage(gi526003651)	2.22e-06	Show

Region 5, total 29 CDS

#	CDS Position	BLAST Hit	E-Value	Sequence
1	complement(3855980..3856342)	PHAGE_Bacill_BCD7_NC_019515: 6-pyruvoyl tetrahydrobiopterin synthase; NCTC8535_03681; phage(gi422935983)	3.10e-11	Show
2	3857247..3857744	Uncharacterised protein; NCTC8535_03682	0.0	Show
3	3857783..3858046	Uncharacterised protein; NCTC8535_03683	0.0	Show
4	complement(3858519..3858677)	Uncharacterised protein; NCTC8535_03684	0.0	Show
5	complement(3858690..3860336)	PHAGE_Entero_P88_NC_026014: tail fiber protein; NCTC8535_03685; phage(gi744692739)	9.74e-62	Show
6	complement(3860338..3860973)	PHAGE_Burkho_BcepMu_NC_005882: gp51; NCTC8535_03686; phage(gi48696961)	4.12e-29	Show
7	complement(3860966..3862090)	PHAGE_Burkho_BcepMu_NC_005882: gp50; NCTC8535_03687; phage(gi48696960)	1.04e-137	Show
8	complement(3862081..3862446)	PHAGE_Burkho_BcepMu_NC_005882: gp49; NCTC8535_03688; phage(gi48696959)	1.15e-43	Show
9	complement(3862526..3863134)	PHAGE_Burkho_BcepMu_NC_005882: gp48; NCTC8535_03689; phage(gi48696958)	1.73e-33	Show
10	complement(3863134..3864183)	PHAGE_Burkho_BcepMu_NC_005882: tail protein; NCTC8535_03690; phage(gi48696957)	2.63e-113	Show
11	complement(3864171..3864380)	PHAGE_Burkho_BcepMu_NC_005882: gp46; NCTC8535_03691; phage(gi48696956)	2.84e-19	Show
12	complement(3864390..3865289)	PHAGE_Burkho_BcepMu_NC_005882: gp45; NCTC8535_03692; phage(gi48696955)	2.71e-65	Show
13	complement(3865289..3867193)	PHAGE_Burkho_BcepMu_NC_005882: gp44; NCTC8535_03693; phage(gi48696954)	7.09e-56	Show
14	complement(3867332..3867634)	PHAGE_Burkho_BcepMu_NC_005882: gp41; NCTC8535_03694; phage(gi48696951)	1.55e-09	Show
15	complement(3867750..3868274)	PHAGE_Burkho_BcepMu_NC_005882: gp40; NCTC8535_03695; phage(gi48696950)	2.33e-93	Show
16	complement(3868274..3869692)	PHAGE_Burkho_BcepMu_NC_005882: major tail sheath protein; NCTC8535_03696; phage(gi48696949)	0.0	Show
17	complement(3869682..3869852)	PHAGE_Burkho_BcepMu_NC_005882: gp38; NCTC8535_03697; phage(gi48696948)	1.45e-12	Show
18	complement(3869852..3870400)	PHAGE_Burkho_BcepMu_NC_005882: gp37; NCTC8535_03698; phage(gi48696947)	6.85e-45	Show
19	complement(3870595..3870918)	PHAGE_Burkho_BcepMu_NC_005882: gp25; NCTC8535_03699; phage(gi48696935)	2.11e-29	Show
20	complement(3870938..3871558)	PHAGE_Pseudo_JBD67_NC_042135: DNA helicase; NCTC8535_03700; phage(gi100021)	3.02e-70	Show
21	complement(3871555..3871851)	PHAGE_Burkho_BcepMu_NC_005882: gp21; NCTC8535_03701; phage(gi48696931)	2.76e-18	Show
22	complement(3871998..3872642)	Uncharacterised protein; NCTC8535_03702	0.0	Show
23	complement(3872639..3873076)	PHAGE_Burkho_BcepMu_NC_005882: gp17; NCTC8535_03703; phage(gi48696927)	4.95e-12	Show
24	3873389..3873694	PHAGE_Burkho_BcepMu_NC_005882: gp12; NCTC8535_03704; phage(gi48696922)	2.39e-06	Show
25	3873705..3874640	PHAGE_Burkho_BcepMu_NC_005882: gp10; NCTC8535_03705; phage(gi48696920)	2.20e-40	Show
26	3874641..3876245	PHAGE_Burkho_BcepMu_NC_005882: gp09; NCTC8535_03706; phage(gi48696919)	0.0	Show
27	3876411..3877313	PHAGE_Burkho_BcepMu_NC_005882: gp08; NCTC8535_03707; phage(gi48696918)	3.05e-121	Show
28	3877395..3877742	PHAGE_Burkho_BcepMu_NC_005882: gp01; NCTC8535_03708; phage(gi48696911)	6.31e-43	Show
29	3878160..3880037	PHAGE_Ralsto_RSL1_NC_010811: glutathionylspermidine synthase; NCTC8535_03709; phage(gi189426829)	3.91e-27	Show

Region 6, total 57 CDS

#	CDS Position	BLAST Hit	E-Value	Sequence
1	4660542..4663352	PROPHAGE_Shigel_301: serine protease; NCTC8535_04387; phage(gi24114232)	1.52e-06	Show
2	4663679..4664365	putative hydrolase; NCTC8535_04388	0.0	Show
3	complement(4664432..4664617)	Uncharacterised protein; NCTC8535_04389	0.0	Show
4	complement(4664695..4665762)	PHAGE_Entero_HK97_NC_002167: integrase; NCTC8535_04390; phage(gi9634162)	1.86e-131	Show
5	complement(4665701..4665961)	PHAGE_Entero_HK022_NC_002166: excisionase; NCTC8535_04391; phage(gi9634145)	3.83e-15	Show
6	complement(4666181..4666420)	PHAGE_Entero_phi80_NC_021190: hypothetical protein; NCTC8535_04392; phage(gi824479611)	3.77e-14	Show
7	complement(4666398..4666682)	PHAGE_Entero_186_NC_001317: Orf83; NCTC8535_04393; phage(gi9634094)	3.90e-23	Show
8	complement(4666783..4667064)	PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC8535_04394; phage(gi100007)	1.14e-28	Show
9	complement(4667242..4667571)	Uncharacterised protein; NCTC8535_04395	0.0	Show
10	complement(4667564..4667794)	PHAGE_Escher_phiV10_NC_007804: hypothetical protein; NCTC8535_04396; phage(gi89152463)	2.96e-30	Show
11	complement(4667787..4668176)	PHAGE_Pseudo_PAJU2_NC_011373: hypothetical protein; NCTC8535_04397; phage(gi209552470)	1.68e-23	Show
12	complement(4668166..4668390)	PHAGE_Acinet_AP22_NC_017984: hypothetical protein; NCTC8535_04398; phage(gi388570774)	2.30e-08	Show
13	complement(4668387..4668698)	PHAGE_Escher_HK639_NC_016158: eae-like protein; NCTC8535_04399; phage(gi356870657)	3.93e-21	Show
14	complement(4668708..4669031)	Uncharacterised protein; NCTC8535_04400	0.0	Show
15	complement(4669065..4669502)	PHAGE_Shigel_Sf6_NC_005344: gene 26 protein; NCTC8535_04401; phage(gi41057303)	2.33e-82	Show
16	complement(4669511..4669975)	PHAGE_Salmon_SJ46_NC_031129: RNA polymerase sigma factor; NCTC8535_04402; phage(gi100049)	3.88e-73	Show
17	complement(4669976..4670842)	PHAGE_Acinet_vB_AbaS_TRS1_NC_031098: RegA; NCTC8535_04403; phage(gi100039)	1.38e-88	Show
18	complement(4670847..4671518)	PHAGE_Cronob_vB_CsaM_GAP32_NC_019401: putative DNA polymerase III epsilon subunit; NCTC8535_04404; phage(gi414087193)	4.66e-17	Show
19	complement(4671496..4671666)	PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC8535_04405; phage(gi764162296)	1.17e-06	Show
20	complement(4671663..4671863)	Uncharacterised protein; NCTC8535_04406	0.0	Show
21	complement(4671853..4672014)	PHAGE_Salmon_epsilon34_NC_011976: CIII-like protein; NCTC8535_04407; phage(gi221328657)	3.22e-09	Show
22	complement(4672045..4673070)	PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC8535_04408; phage(gi764162300)	1.20e-77	Show
23	complement(4673253..4673885)	PHAGE_Entero_HK542_NC_019769: hypothetical protein; NCTC8535_04409; phage(gi428783378)	1.24e-45	Show
24	complement(4673918..4674067)	Uncharacterised protein; NCTC8535_04410	0.0	Show
25	4674246..4674656	PHAGE_Entero_HK225_NC_019717: hypothetical protein; NCTC8535_04411; phage(gi428782442)	1.51e-63	Show
26	complement(4674729..4675277)	PHAGE_Salmon_MA12_NC_031021: membrane-associated initiation of head vertex; NCTC8535_04412; phage(gi100034)	9.55e-34	Show
27	complement(4675766..4676518)	PHAGE_Escher_HK75_NC_016160: cI repressor; NCTC8535_04413; phage(gi356870714)	5.61e-39	Show
28	4676639..4676872	PHAGE_Entero_BP_4795_NC_004813: putative regulatory protein Cro; NCTC8535_04414; phage(gi157166009)	7.66e-27	Show
29	4676990..4677289	PHAGE_Stx2_c_1717_NC_011357: CII protein; NCTC8535_04415; phage(gi209447147)	3.67e-41	Show
30	4677316..4677723	PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC8535_04416; phage(gi356870653)	1.09e-78	Show
31	4677720..4678628	PHAGE_Entero_mEp237_NC_019704: DNA replication protein O; NCTC8535_04417; phage(gi435439307)	1.18e-142	Show
32	4678625..4679332	PHAGE_Cronob_phiES15_NC_018454: putative replication protein P; NCTC8535_04418; phage(gi401817577)	1.51e-81	Show
33	4679329..4679526	Uncharacterised protein; NCTC8535_04419	0.0	Show
34	4679526..4679789	Uncharacterised protein; NCTC8535_04420	0.0	Show
35	4679782..4680024	PHAGE_Edward_PEi20_NC_028683: hypothetical protein; NCTC8535_04421; phage(gi966200079)	6.75e-23	Show
36	4680036..4680272	PHAGE_Salmon_ST64T_NC_004348: hypothetical protein; NCTC8535_04422; phage(gi24371564)	6.20e-12	Show
37	4680272..4680460	PHAGE_Entero_NJ01_NC_018835: hypothetical protein; NCTC8535_04423; phage(gi410490954)	1.28e-10	Show
38	4680463..4680903	PHAGE_Cronob_ENT47670_NC_019927: putative ninB protein; NCTC8535_04424; phage(gi431810524)	4.43e-60	Show
39	4680900..4681322	PHAGE_Rhizob_RR1_A_NC_021560: hypothetical protein; NCTC8535_04425; phage(gi514231507)	1.20e-31	Show
40	4681331..4682089	PHAGE_Entero_SfI_NC_027339: hypothetical protein; NCTC8535_04426; phage(gi849250256)	2.22e-149	Show
41	4682097..4682294	PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC8535_04427; phage(gi764162319)	8.15e-12	Show
42	4682297..4682884	PHAGE_Edward_GF_2_NC_026611: putative recombination endonuclease; NCTC8535_04428; phage(gi764162320)	9.47e-82	Show
43	4682881..4683090	Uncharacterised protein; NCTC8535_04429	0.0	Show
44	4683087..4683575	PHAGE_Salmon_118970_sal4_NC_030919: hypothetical protein; NCTC8535_04430; phage(gi100037)	8.34e-88	Show
45	complement(4683822..4684016)	Uncharacterised protein; NCTC8535_04431	0.0	Show
46	4684135..4684404	PHAGE_Entero_HK225_NC_019717: holin; NCTC8535_04432; phage(gi428782443)	1.83e-41	Show
47	4684376..4684870	PHAGE_Salmon_SPN9CC_NC_017985: phage lysozyme; NCTC8535_04433; phage(gi389060531)	4.30e-71	Show
48	4684867..4685316	PHAGE_Entero_SfI_NC_027339: Rz protein; NCTC8535_04434; phage(gi849250282)	1.25e-24	Show
49	4685326..4685457	Uncharacterised protein; NCTC8535_04435	0.0	Show
50	4685649..4686350	PHAGE_Cronob_ENT47670_NC_019927: phage antirepressor protein; NCTC8535_04436; phage(gi431810509)	1.44e-143	Show
51	4686830..4686940	Uncharacterised protein; NCTC8535_04437	0.0	Show
52	4686933..4687082	Uncharacterised protein; NCTC8535_04438	0.0	Show
53	4687137..4687289	PHAGE_Escher_HK639_NC_016158: terminase small subunit; NCTC8535_04439; phage(gi356870601)	5.06e-21	Show
54	4687519..4687737	PHAGE_Edward_GF_2_NC_026611: putative terminase small subunit; NCTC8535_04440; phage(gi764162248)	6.66e-25	Show
55	4688700..4689029	PHAGE_Pseudo_PS_1_NC_029066: terminase large subunit; NCTC8535_04441; phage(gi985757694)	7.46e-56	Show
56	4689283..4689999	PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC8535_04442; phage(gi431810500)	3.16e-59	Show
57	4690626..4691240	PHAGE_Cronob_ENT47670_NC_019927: phage head morphogenesis; NCTC8535_04443; phage(gi431810507)	1.57e-83	Show

Click on a region to see details.

Intact (score > 90)

Questionable (score 70-90)

Incomplete (score < 70)

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Length: 265322 bps

Phages: 6

Click on a region in the genome above to show details here.

Click on a sequence to see details.

Lysis

Terminase

Portal Protein

Protease

Coat Protein

Tail Shaft

Attachment Site

Integrase

Phage-like Protein

Hypotheical Protein

Other

Transposase

Fiber Protein

Plate Protein

tRNA

Download data as .txt file: png_input