Submission Results

Sequence Name: Not Available

GenBank Accession Number: UGJB01000004.1

GenInfo (GI) Number: 0000000000

Download Results: UGJB01000004.1.PHASTER.zip

gi|00000000|ref|UGJB01000004.1| Enterobacter cloacae strain NCTC10005 genome assembly, contig: 5313651, gc%: 54.78%

Download summary as .txt file: summary.txt file_download

Total: 12 prophage regions have been identified, of which 7 regions are intact, 3 regions are incomplete, and 2 regions are questionable.

RegionRegion LengthCompletenessScore# Total ProteinsRegion PositionMost Common PhageGC %Details
137.9Kbintact150541098965-1136880 info_outlinePHAGE_Salmon_Fels_2_NC_010463(32)53.94%Show info_outline
243.3Kbincomplete60311706407-1749798 info_outlinePHAGE_Escher_phiV10_NC_007804(2)57.33%Show info_outline
327.4Kbincomplete60161856808-1884235 info_outlinePHAGE_Shigel_SfIV_NC_022749(2)53.29%Show info_outline
462.7Kbintact150931954854-2017577 info_outlinePHAGE_Aeromo_vB_AsaM_56_NC_019527(17)50.93%Show info_outline
533.2Kbintact150542371817-2405097 info_outlinePHAGE_Cronob_ENT47670_NC_019927(12)51.51%Show info_outline
637.9Kbintact100442709917-2747852 info_outlinePHAGE_Escher_HK639_NC_016158(6)49.93%Show info_outline
728.9Kbintact150402743337-2772333 info_outlinePHAGE_Entero_mEp237_NC_019704(12)50.91%Show info_outline
826Kbincomplete50153839890-3865936 info_outlinePHAGE_Cronob_vB_CsaM_GAP32_NC_019401(2)56.01%Show info_outline
947.9Kbintact150403914271-3962210 info_outlinePHAGE_Haemop_HP1_NC_001697(17)53.96%Show info_outline
1045.7Kbintact150824279548-4325302 info_outlinePHAGE_Escher_HK639_NC_016158(14)52.42%Show info_outline
119.6Kbquestionable80174957287-4966957 info_outlinePHAGE_Entero_P4_NC_001609(5)53.44%Show info_outline
1234.8Kbquestionable90305117998-5152839 info_outlinePHAGE_Shigel_Sf6_NC_005344(2)51.92%Show info_outline
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Region: The number assigned to the region.
Region Length: The length of the sequence of that region (in bp).
Completeness: A prediction of whether the region contains a intact or incomplete prophage based on the above criteria.
Score: The score of the region based on the above criteria.
# Total Proteins: The number of ORFs present in the region.
Region Position: The start and end positions of the region on the bacterial chromosome.
Most Common Phage: The phage(s) with the highest number of proteins most similar to those in the region.
GC %: The percentage of GC nucleotides of the region.

Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:

  1. If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
Method 2:
  1. If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
Method 3:
  1. If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
  2. If the size of the region is greater than 30 Kb, the score will be increased by 10.
  3. If there are at least 40 proteins in the region, the score will be increased by 10.
  4. If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
Compared the total score of method 2 with the total score of method 3, the bigger one is chosen as the total score of the region.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.

gi|00000000|ref|UGJB01000004.1| Enterobacter cloacae strain NCTC10005 genome assembly, contig: 5313651, gc%: 54.78%

Download details as .txt file: detail.txt file_download

Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File

Region 1, total 57 CDS

#CDS PositionBLAST HitE-ValueSequence
11098965..1098980attL0.0Showinfo_outline
2complement(1099020..1100105)PHAGE_Salmon_Fels_2_NC_010463: integrase; NCTC10005_01855; phage(gi169936064)3.41e-135Showinfo_outline
3complement(1100293..1100727)Uncharacterised protein; NCTC10005_018560.0Showinfo_outline
4complement(1100720..1101373)PHAGE_Salmon_Fels_2_NC_010463: P2 CI-like protein; NCTC10005_01857; phage(gi169936063)2.07e-46Showinfo_outline
51101462..1101698PHAGE_Haemop_HP2_NC_003315: orf2(S)cox; NCTC10005_01858; phage(gi17981819)1.09e-06Showinfo_outline
61101733..1102242PHAGE_Salmon_Fels_2_NC_010463: bacteriophage regulatory protein CII; NCTC10005_01859; phage(gi169936061)4.06e-117Showinfo_outline
71102250..1102450PHAGE_Salmon_Fels_2_NC_010463: hypothetical protein; NCTC10005_01860; phage(gi169936060)6.91e-17Showinfo_outline
81102414..1102755PHAGE_Salmon_Fels_2_NC_010463: hypothetical protein; NCTC10005_01861; phage(gi169936058)4.69e-72Showinfo_outline
91102823..1103056PHAGE_Salmon_Fels_2_NC_010463: hypothetical protein; NCTC10005_01862; phage(gi169936057)5.10e-42Showinfo_outline
101103056..1103283PHAGE_Salmon_Fels_2_NC_010463: DksA-like zinc finger domain containing protein; NCTC10005_01863; phage(gi169936056)9.33e-49Showinfo_outline
111103280..1104140PHAGE_Salmon_Fels_2_NC_010463: DNA adenine methylase-like protein; NCTC10005_01864; phage(gi169936055)7.90e-171Showinfo_outline
121104131..1106539PHAGE_Salmon_Fels_2_NC_010463: P2 gpA-like protein; NCTC10005_01865; phage(gi169936054)0.0Showinfo_outline
131106900..1107133PHAGE_Salmon_Fels_2_NC_010463: TumB protein; NCTC10005_01866; phage(gi169936052)1.62e-44Showinfo_outline
141107576..1108304Uncharacterised protein; NCTC10005_018670.0Showinfo_outline
151108324..1108986putative repressor protein from prophage; NCTC10005_018680.0Showinfo_outline
161109187..1109870Uncharacterised protein; NCTC10005_018690.0Showinfo_outline
17complement(1109882..1110505)PHAGE_Salmon_Fels_2_NC_010463: portal vertex protein; NCTC10005_01870; phage(gi169936049)7.82e-136Showinfo_outline
18complement(1110450..1110917)PHAGE_Salmon_Fels_2_NC_010463: portal vertex protein; NCTC10005_01871; phage(gi169936049)2.10e-63Showinfo_outline
19complement(1110904..1111407)PHAGE_Salmon_Fels_2_NC_010463: terminase ATPase subunit; NCTC10005_01872; phage(gi169936048)4.35e-60Showinfo_outline
20complement(1111421..1112686)PHAGE_Salmon_Fels_2_NC_010463: terminase ATPase subunit; NCTC10005_01873; phage(gi169936048)0.0Showinfo_outline
211112829..1113662PHAGE_Salmon_Fels_2_NC_010463: capsid-scaffolding protein; NCTC10005_01874; phage(gi169936047)0.0Showinfo_outline
221113679..1114740PHAGE_Salmon_Fels_2_NC_010463: capsid protein; NCTC10005_01875; phage(gi169936046)0.0Showinfo_outline
231114744..1115253PHAGE_Salmon_Fels_2_NC_010463: terminase endonuclease subunit; NCTC10005_01876; phage(gi169936045)2.12e-112Showinfo_outline
241115489..1115953PHAGE_Salmon_Fels_2_NC_010463: P2 gpL-like protein; NCTC10005_01877; phage(gi169936044)9.67e-112Showinfo_outline
251115953..1116156PHAGE_Salmon_Fels_2_NC_010463: P2 gpX-like tail protein; NCTC10005_01878; phage(gi169936043)1.79e-42Showinfo_outline
261116160..1116375PHAGE_Salmon_Fels_2_NC_010463: lysis protein; NCTC10005_01879; phage(gi169936042)1.37e-45Showinfo_outline
271116356..1116865PHAGE_Salmon_Fels_2_NC_010463: endolysin; NCTC10005_01880; phage(gi169936041)9.40e-113Showinfo_outline
281116870..1117247Uncharacterised protein; NCTC10005_018810.0Showinfo_outline
291117247..1117672PHAGE_Salmon_Fels_2_NC_010463: P2 LysB-like protein; NCTC10005_01882; phage(gi169936038)3.49e-91Showinfo_outline
301117768..1118199PHAGE_Salmon_Fels_2_NC_010463: P2 gpR-like tail completion protein; NCTC10005_01883; phage(gi169936036)1.14e-98Showinfo_outline
311118192..1118638PHAGE_Salmon_Fels_2_NC_010463: P2 gpS-like tail completion protein; NCTC10005_01884; phage(gi169936035)8.67e-102Showinfo_outline
321118707..1119084PHAGE_Salmon_Fels_2_NC_010463: P2 gpV-like protein; NCTC10005_01885; phage(gi169936034)2.19e-73Showinfo_outline
331119078..1119284PHAGE_Salmon_Fels_2_NC_010463: P2 gpV-like protein; NCTC10005_01886; phage(gi169936034)1.00e-38Showinfo_outline
341119281..1119640PHAGE_Salmon_Fels_2_NC_010463: baseplate wedge subunit; NCTC10005_01887; phage(gi169936033)7.35e-71Showinfo_outline
351119627..1120229PHAGE_Salmon_Fels_2_NC_010463: baseplate assembly protein; NCTC10005_01888; phage(gi169936032)5.55e-122Showinfo_outline
361120244..1120534PHAGE_Salmon_Fels_2_NC_010463: baseplate assembly protein; NCTC10005_01889; phage(gi169936032)2.73e-58Showinfo_outline
371120527..1121132PHAGE_Salmon_Fels_2_NC_010463: P2 gpI-like baseplate assembly protein; NCTC10005_01890; phage(gi169936031)2.27e-138Showinfo_outline
381121129..1122451PHAGE_Salmon_Fels_2_NC_010463: P2 gpH-like protein; NCTC10005_01891; phage(gi169936030)1.03e-154Showinfo_outline
391123018..1124190PHAGE_Salmon_Fels_2_NC_010463: major tail sheath protein; NCTC10005_01892; phage(gi169936025)0.0Showinfo_outline
401124200..1124715PHAGE_Salmon_Fels_2_NC_010463: major tail tube protein; NCTC10005_01893; phage(gi169936024)1.40e-114Showinfo_outline
41complement(1124967..1125113)Uncharacterised protein; NCTC10005_018940.0Showinfo_outline
421125199..1126554PHAGE_Salmon_Fels_2_NC_010463: P2 gpT-like tail protein; NCTC10005_01895; phage(gi169936021)0.0Showinfo_outline
431126503..1126631PHAGE_Salmon_Fels_2_NC_010463: P2 gpT-like tail protein; NCTC10005_01896; phage(gi169936021)5.64e-17Showinfo_outline
441126664..1126777PHAGE_Salmon_Fels_2_NC_010463: P2 gpT-like tail protein; NCTC10005_01897; phage(gi169936021)9.48e-14Showinfo_outline
451126777..1127883PHAGE_Salmon_Fels_2_NC_010463: P2 gpT-like tail protein; NCTC10005_01898; phage(gi169936021)3.32e-80Showinfo_outline
461127928..1128389PHAGE_Salmon_Fels_2_NC_010463: P2 gpT-like tail protein; NCTC10005_01899; phage(gi169936021)6.59e-29Showinfo_outline
471128603..1129211PHAGE_Salmon_Fels_2_NC_010463: P2 gpU-like tail protein; NCTC10005_01900; phage(gi169936020)9.36e-107Showinfo_outline
481129208..1130308PHAGE_Salmon_Fels_2_NC_010463: tail protein; NCTC10005_01901; phage(gi169936019)0.0Showinfo_outline
49complement(1130734..1130809)tRNA0.0Showinfo_outline
501130765..1130780attR0.0Showinfo_outline
511131123..1131455G/U mismatch-specific DNA glycosylase; NCTC10005_019030.0Showinfo_outline
52complement(1131539..1133386)PHAGE_Synech_S_CBS3_NC_015465: group 2 RNA polymerase sigma factor; NCTC10005_01904; phage(gi331028036)5.50e-37Showinfo_outline
53complement(1133553..1133738)DNA primase; NCTC10005_019050.0Showinfo_outline
54complement(1133749..1135299)PHAGE_Helico_phiHP33_NC_016568: DNA primase; NCTC10005_01906; phage(gi371671350)1.29e-42Showinfo_outline
55complement(1135407..1135631)PHAGE_Pelagi_HTVC008M_NC_020484: 30S ribosomal protein S21; NCTC10005_01907; phage(gi460042545)7.78e-05Showinfo_outline
561135867..1136016PROPHAGE_Escher_MG1655: glycation-binding protein, predicted protease/chaperone; essential for genome maintenance; NCTC10005_01908; phage(gi16130960)6.72e-25Showinfo_outline
571136200..1136880PROPHAGE_Escher_MG1655: glycation-binding protein, predicted protease/chaperone; essential for genome maintenance; NCTC10005_01909; phage(gi16130960)7.08e-154Showinfo_outline

Region 2, total 33 CDS

#CDS PositionBLAST HitE-ValueSequence
11706407..1706418attL0.0Showinfo_outline
2complement(1718608..1719141)PHAGE_Gordon_Cucurbita_NC_031029: hypothetical protein; NCTC10005_02760; phage(gi100057)3.57e-15Showinfo_outline
3complement(1719213..1719749)PHAGE_Gordon_Cucurbita_NC_031029: hypothetical protein; NCTC10005_02761; phage(gi100057)6.99e-09Showinfo_outline
41719909..1721375PHAGE_Staphy_42E_NC_007052: ORF012; NCTC10005_02762; phage(gi66395520)2.17e-35Showinfo_outline
51721443..1723020PHAGE_Halovi_HGTV_1_NC_021328: carbamoyl phosphate synthase small subunit; NCTC10005_02763; phage(gi509140368)8.90e-05Showinfo_outline
61723326..1724528PHAGE_Salmon_epsilon15_NC_004775: integrase; NCTC10005_02764; phage(gi30387406)3.74e-148Showinfo_outline
71724676..1724888PHAGE_Salmon_epsilon15_NC_004775: hypothetical protein; NCTC10005_02765; phage(gi30387412)2.66e-11Showinfo_outline
81724901..1725728PHAGE_Rhodof_P26218_NC_029061: RepA; NCTC10005_02766; phage(gi985757636)1.84e-18Showinfo_outline
91725715..1726596putative replication protein C; NCTC10005_027670.0Showinfo_outline
101727628..1727804putative stabilization protein; NCTC10005_027690.0Showinfo_outline
111727958..1728752putative mating pair formation protein; NCTC10005_027700.0Showinfo_outline
121728749..1728985Uncharacterised protein; NCTC10005_027710.0Showinfo_outline
131728996..1730423TrbL/VirB6 plasmid conjugal transfer protein; NCTC10005_027720.0Showinfo_outline
14complement(1730999..1731202)Uncharacterised protein; NCTC10005_027740.0Showinfo_outline
15complement(1731199..1731315)Uncharacterised protein; NCTC10005_027750.0Showinfo_outline
16complement(1731318..1731953)putative sodium bile acid symporter family protein; NCTC10005_027760.0Showinfo_outline
17complement(1732383..1732889)arsenate reductase; NCTC10005_027770.0Showinfo_outline
18complement(1732886..1733653)putative arsenical resistance protein; NCTC10005_027780.0Showinfo_outline
19complement(1733650..1733982)putative transcriptional regulator; NCTC10005_027790.0Showinfo_outline
201734198..1735877PROPHAGE_Brucel_1330: transposase, putative; NCTC10005_02780; phage(gi23501616)7.55e-32Showinfo_outline
211735880..1736788TniB protein; NCTC10005_027810.0Showinfo_outline
221736785..1738002TniQ protein; NCTC10005_027820.0Showinfo_outline
231738063..1738677PHAGE_Entero_Mu_NC_000929: Gin; NCTC10005_02783; phage(gi9633542)4.81e-51Showinfo_outline
24complement(1738730..1738966)Mercuric transport protein, MerE; NCTC10005_027840.0Showinfo_outline
25complement(1738963..1739328)Mercuric resistance operon coregulator; NCTC10005_027850.0Showinfo_outline
26complement(1739497..1740990)Mercuric reductase; NCTC10005_027860.0Showinfo_outline
27complement(1740987..1741232)mercury ion transport transmembrane protein MerF; NCTC10005_027870.0Showinfo_outline
28complement(1741235..1741510)mercuric transport protein periplasmic component MerP; NCTC10005_027880.0Showinfo_outline
29complement(1741526..1741876)Mercuric transport protein, MerT; NCTC10005_027890.0Showinfo_outline
301741948..1742382transcriptional regulator MerR; NCTC10005_027900.0Showinfo_outline
311742482..1743486PROPHAGE_Shewan_MR-1: IS110 family transposase; NCTC10005_02791; phage(gi24375433)1.97e-59Showinfo_outline
321743908..1744645PHAGE_Entero_phi80_NC_021190: DNA invertase, resolvase, site-specific recombinase Pin; NCTC10005_02792; phage(gi824479608)2.95e-13Showinfo_outline
331749798..1749809attR0.0Showinfo_outline

Region 3, total 20 CDS

#CDS PositionBLAST HitE-ValueSequence
11856808..1856820attL0.0Showinfo_outline
21857130..1857141attL0.0Showinfo_outline
3complement(1867538..1868182)PROPHAGE_Escher_MG1655: IS150 transposase B; NCTC10005_02991; phage(gi16131429)3.58e-48Showinfo_outline
4complement(1868194..1868490)Transposase and inactivated derivatives; NCTC10005_029920.0Showinfo_outline
5complement(1868805..1869767)Zn-dependent protease with chaperone function; NCTC10005_029930.0Showinfo_outline
6complement(1869754..1870503)diguanylate cyclase; NCTC10005_029940.0Showinfo_outline
7complement(1870716..1870937)Uncharacterised protein; NCTC10005_029950.0Showinfo_outline
8complement(1870937..1873732)PHAGE_Agroba_Atu_ph07_NC_042013: putative virion structural protein; NCTC10005_02996; phage(gi100292)1.29e-141Showinfo_outline
9complement(1873838..1874407)PHAGE_Cyanop_P_RSM1_NC_021071: heat shock protein; NCTC10005_02997; phage(gi481019345)9.07e-08Showinfo_outline
10complement(1874442..1874723)PHAGE_Bacill_SPP1_NC_004166: hypothetical protein; NCTC10005_02998; phage(gi22855124)2.21e-06Showinfo_outline
11complement(1874967..1875230)Uncharacterised protein; NCTC10005_029990.0Showinfo_outline
121875245..1875508PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; NCTC10005_03000; phage(gi157166064)6.26e-06Showinfo_outline
131875910..1875921attR0.0Showinfo_outline
141875948..1876451PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; NCTC10005_03001; phage(gi557307573)3.24e-114Showinfo_outline
15complement(1876672..1877925)galactoside permease; NCTC10005_030020.0Showinfo_outline
16complement(1877977..1881051)beta-D-galactosidase; NCTC10005_030030.0Showinfo_outline
17complement(1881173..1882321)PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC10005_03004; phage(gi100002)0.0Showinfo_outline
18complement(1882423..1882713)PHAGE_Shigel_SfIV_NC_022749: ISEhe3 orfA; NCTC10005_03005; phage(gi557307550)2.40e-43Showinfo_outline
19complement(1882857..1883972)PROPHAGE_Escher_CFT073: putative prophage integrase; NCTC10005_03006; phage(gi26250313)1.34e-175Showinfo_outline
201884235..1884247attR0.0Showinfo_outline

Region 4, total 95 CDS

#CDS PositionBLAST HitE-ValueSequence
11954854..1954867attL0.0Showinfo_outline
21968187..1969209PROPHAGE_Escher_CFT073: putative prophage integrase; NCTC10005_03119; phage(gi26250313)3.63e-48Showinfo_outline
31969206..1969346PROPHAGE_Escher_Sakai: putative integrase; NCTC10005_03120; phage(gi15833788)9.94e-08Showinfo_outline
4complement(1969424..1969579)PHAGE_Entero_UAB_Phi20_NC_031019: recombination endonuclease subunit; NCTC10005_03121; phage(gi100052)1.34e-05Showinfo_outline
5complement(1969595..1969747)PHAGE_Entero_NJ01_NC_018835: hypothetical protein; NCTC10005_03122; phage(gi410490915)4.86e-10Showinfo_outline
6complement(1969783..1970397)PHAGE_Entero_P22_NC_002371: EaC; NCTC10005_03123; phage(gi51236732)5.40e-106Showinfo_outline
7complement(1970410..1970610)PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC10005_03124; phage(gi356870630)4.11e-28Showinfo_outline
8complement(1970583..1970699)Uncharacterised protein; NCTC10005_031250.0Showinfo_outline
9complement(1970826..1971425)PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC10005_03126; phage(gi356870659)5.37e-39Showinfo_outline
10complement(1971422..1972378)PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC10005_03127; phage(gi100008)1.21e-48Showinfo_outline
11complement(1972558..1972902)Uncharacterised protein; NCTC10005_031280.0Showinfo_outline
12complement(1972978..1973358)PHAGE_Salmon_103203_sal5_NC_031946: membrane-associated initiation of head vertex; NCTC10005_03129; phage(gi100034)4.91e-52Showinfo_outline
13complement(1973327..1973425)PHAGE_Entero_IME10_NC_019501: single-stranded DNA-binding protein SSB-P1; NCTC10005_03130; phage(gi422934292)5.84e-09Showinfo_outline
14complement(1973426..1973791)PHAGE_Acinet_vB_AbaS_TRS1_NC_031098: RegA; NCTC10005_03131; phage(gi100039)5.34e-14Showinfo_outline
15complement(1974309..1974479)PHAGE_Shigel_Sf6_NC_005344: gene 29 protein; NCTC10005_03132; phage(gi41057307)5.55e-24Showinfo_outline
16complement(1974601..1974702)PHAGE_Entero_mEp234_NC_019715: Kil protein; NCTC10005_03133; phage(gi428782285)3.35e-08Showinfo_outline
17complement(1974687..1975289)PHAGE_Entero_HK446_NC_019714: CIII protein; NCTC10005_03134; phage(gi428782228)2.69e-13Showinfo_outline
18complement(1975437..1975631)PHAGE_Pseudo_PAJU2_NC_011373: hypothetical protein; NCTC10005_03135; phage(gi209552454)2.07e-09Showinfo_outline
19complement(1975677..1975979)PHAGE_Erwini_phiEt88_NC_015295: hypothetical protein; NCTC10005_03136; phage(gi327198613)3.95e-18Showinfo_outline
20complement(1975983..1976231)PHAGE_Salmon_118970_sal4_NC_030919: hypothetical protein; NCTC10005_03137; phage(gi100017)3.93e-40Showinfo_outline
21complement(1976961..1977278)PROPHAGE_Escher_CFT073: transposase insF; NCTC10005_03138; phage(gi26250329)2.53e-53Showinfo_outline
22complement(1977218..1977580)PROPHAGE_Escher_CFT073: transposase insF; NCTC10005_03139; phage(gi26250329)7.85e-41Showinfo_outline
23complement(1977525..1978112)PROPHAGE_Xantho_33913: ISxac3 transposase; NCTC10005_03140; phage(gi21231087)1.75e-28Showinfo_outline
241978139..1978387PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC10005_03141; phage(gi356870646)5.05e-25Showinfo_outline
25complement(1978420..1978890)Uncharacterised protein; NCTC10005_031420.0Showinfo_outline
26complement(1978887..1979105)Uncharacterised protein; NCTC10005_031430.0Showinfo_outline
27complement(1979269..1979934)PHAGE_Entero_HK544_NC_019767: prophage repressor; NCTC10005_03144; phage(gi428783257)1.36e-130Showinfo_outline
281980083..1980280PHAGE_Entero_lambda_NC_001416: antirepressor; NCTC10005_03145; phage(gi9626293)1.02e-34Showinfo_outline
291980392..1980502PHAGE_Salmon_103203_sal5_NC_031946: loader of DNA helicase; NCTC10005_03146; phage(gi100045)9.81e-15Showinfo_outline
301980728..1980886PHAGE_Entero_HK446_NC_019714: hypothetical protein; NCTC10005_03147; phage(gi428782236)1.28e-25Showinfo_outline
311980873..1981217PHAGE_Entero_HK225_NC_019717: DNA replication protein O; NCTC10005_03148; phage(gi428782425)1.88e-24Showinfo_outline
321981392..1981775DNA replication protein gp18; NCTC10005_031490.0Showinfo_outline
331981775..1983109PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; NCTC10005_03150; phage(gi100003)9.34e-85Showinfo_outline
341983113..1983643Uncharacterised protein; NCTC10005_031510.0Showinfo_outline
351983612..1983914PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; NCTC10005_03152; phage(gi24373865)4.65e-10Showinfo_outline
361984127..1984780PHAGE_Shigel_Sf6_NC_005344: putative transposase OrfB; NCTC10005_03153; phage(gi41057343)1.93e-158Showinfo_outline
371985244..1985450Uncharacterised protein; NCTC10005_031540.0Showinfo_outline
381985842..1986033Uncharacterised protein; NCTC10005_031550.0Showinfo_outline
391986046..1986456PHAGE_Escher_HK75_NC_016160: NinB; NCTC10005_03156; phage(gi356870721)1.64e-85Showinfo_outline
401986826..1987053Uncharacterised protein; NCTC10005_031570.0Showinfo_outline
411987050..1987424PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC10005_03158; phage(gi764162285)5.63e-12Showinfo_outline
421987417..1987593PHAGE_Entero_ES18_NC_006949: gp67; NCTC10005_03159; phage(gi62362280)3.71e-15Showinfo_outline
431987586..1987876PHAGE_Entero_HK140_NC_019710: hypothetical protein; NCTC10005_03160; phage(gi428781999)1.62e-56Showinfo_outline
441987873..1988238PHAGE_Entero_c_1_NC_019706: holliday-junction resolvase RusA; NCTC10005_03161; phage(gi428781794)2.72e-64Showinfo_outline
451988235..1988477PHAGE_Erwini_phiEt88_NC_015295: hypothetical protein; NCTC10005_03162; phage(gi327198622)9.94e-37Showinfo_outline
461988739..1988924PHAGE_Salmon_g341c_NC_013059: NinZ; NCTC10005_03163; phage(gi255252738)8.95e-08Showinfo_outline
471988921..1989343PHAGE_Salmon_g341c_NC_013059: DNA Repair ATPase; NCTC10005_03164; phage(gi255252706)3.12e-68Showinfo_outline
481989340..1990104PHAGE_Entero_ES18_NC_006949: gp73; NCTC10005_03165; phage(gi62362286)0.0Showinfo_outline
491990564..1990758PHAGE_Salmon_SEN22_NC_028696: class II holin; NCTC10005_03166; phage(gi966201365)4.18e-36Showinfo_outline
501990730..1991224PHAGE_Salmon_SPN9CC_NC_017985: phage lysozyme; NCTC10005_03167; phage(gi389060531)7.75e-70Showinfo_outline
511991221..1991679PHAGE_Entero_phi80_NC_021190: endopeptidase; NCTC10005_03168; phage(gi824479637)1.91e-58Showinfo_outline
521991716..1992003Uncharacterised protein; NCTC10005_031690.0Showinfo_outline
531992297..1992506PHAGE_Entero_4MG_NC_022968: putative phage head fiber protein; NCTC10005_03170; phage(gi563397517)3.47e-12Showinfo_outline
541992506..1992667Uncharacterised protein; NCTC10005_031710.0Showinfo_outline
551992669..1992866PHAGE_Salmon_IME207_NC_031924: hypothetical protein; NCTC10005_03172; phage(gi100023)4.66e-07Showinfo_outline
561992869..1993345PHAGE_Acinet_LZ35_NC_031117: co-chaperonin for GroEL; NCTC10005_03173; phage(gi100075)8.59e-50Showinfo_outline
571993347..1993643PHAGE_Pectob_ZF40_NC_019522: putative TerL large-subunit terminase; NCTC10005_03174; phage(gi422936681)3.73e-39Showinfo_outline
581993625..1995004PHAGE_Pectob_ZF40_NC_019522: putative TerL large-subunit terminase; NCTC10005_03175; phage(gi422936681)0.0Showinfo_outline
591995005..1996114PHAGE_Aeromo_vB_AsaM_56_NC_019527: putative portal protein; NCTC10005_03176; phage(gi422937534)2.22e-70Showinfo_outline
601996075..1996530PHAGE_Aeromo_vB_AsaM_56_NC_019527: putative portal protein; NCTC10005_03177; phage(gi422937534)4.96e-29Showinfo_outline
611996481..1997278PHAGE_Edward_GF_2_NC_026611: putative head protein; NCTC10005_03178; phage(gi764162251)3.16e-75Showinfo_outline
621997291..1998478PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC10005_03179; phage(gi764162253)3.55e-55Showinfo_outline
631998732..1998962PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC10005_03180; phage(gi764162254)8.92e-28Showinfo_outline
641998962..1999996PHAGE_Acinet_AP22_NC_017984: putative capsid protein; NCTC10005_03181; phage(gi388570797)1.31e-95Showinfo_outline
652000049..2000771PHAGE_Aeromo_vB_AsaM_56_NC_019527: hypothetical protein; NCTC10005_03182; phage(gi422937544)3.83e-26Showinfo_outline
662000774..2001226PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC10005_03183; phage(gi764162258)6.91e-32Showinfo_outline
672001223..2001591PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC10005_03184; phage(gi764162259)1.07e-35Showinfo_outline
682001588..2002139PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC10005_03185; phage(gi764162260)1.55e-14Showinfo_outline
692002140..2002754PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC10005_03186; phage(gi764162261)8.17e-45Showinfo_outline
702002766..2003617PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC10005_03187; phage(gi764162261)4.98e-75Showinfo_outline
712003618..2003866PHAGE_Xantho_OP2_NC_007710: hypothetical protein; NCTC10005_03188; phage(gi84662654)5.42e-11Showinfo_outline
722003821..2004057PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC10005_03189; phage(gi764162262)2.57e-06Showinfo_outline
732004066..2004317PHAGE_Acinet_AbP2_NC_041998: hypothetical protein; NCTC10005_03190; phage(gi100031)1.00e-06Showinfo_outline
74complement(2004224..2004439)Uncharacterised protein; NCTC10005_031910.0Showinfo_outline
752004484..2004681PHAGE_Aeromo_vB_AsaM_56_NC_019527: hypothetical protein; NCTC10005_03192; phage(gi422937552)1.13e-05Showinfo_outline
762004681..2006174PHAGE_Edward_GF_2_NC_026611: putative transglycosylase; NCTC10005_03193; phage(gi764162265)1.16e-18Showinfo_outline
772006116..2006601PHAGE_Salmon_SEN34_NC_028699: tail tape measure protein; NCTC10005_03194; phage(gi966201433)6.69e-12Showinfo_outline
782006778..2007143PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC10005_03195; phage(gi764162271)1.86e-17Showinfo_outline
792007254..2007565PHAGE_Edward_GF_2_NC_026611: putative structural protein; NCTC10005_03196; phage(gi764162272)4.03e-27Showinfo_outline
802007555..2008415PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC10005_03197; phage(gi764162273)3.13e-45Showinfo_outline
812008416..2009072PHAGE_Edward_GF_2_NC_026611: putative baseplate protein; NCTC10005_03198; phage(gi764162274)2.42e-42Showinfo_outline
822009131..2009144attR0.0Showinfo_outline
832009161..2009520PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC10005_03199; phage(gi764162275)3.16e-16Showinfo_outline
842009529..2009660PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC10005_03200; phage(gi764162276)4.74e-07Showinfo_outline
852009657..2010403PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC10005_03201; phage(gi764162276)7.77e-70Showinfo_outline
862010363..2010713PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC10005_03202; phage(gi764162276)1.73e-25Showinfo_outline
872010670..2011347PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC10005_03203; phage(gi764162277)8.31e-47Showinfo_outline
882011349..2011447Uncharacterised protein; NCTC10005_032040.0Showinfo_outline
892011491..2011760PHAGE_Burkho_BcepNY3_NC_009604: tail fiber protein; NCTC10005_03205; phage(gi149882931)1.11e-14Showinfo_outline
902011729..2012373PHAGE_Burkho_BcepNY3_NC_009604: tail fiber protein; NCTC10005_03206; phage(gi149882931)2.87e-17Showinfo_outline
912012492..2012692Uncharacterised protein; NCTC10005_032070.0Showinfo_outline
922012818..2014716PHAGE_Arthro_vB_ArtM_ArV1_NC_026606: putative tail fiber protein; NCTC10005_03208; phage(gi764161624)2.47e-08Showinfo_outline
93complement(2014728..2016068)Uncharacterised protein; NCTC10005_032090.0Showinfo_outline
94complement(2016098..2017042)putative glycosyltransferase family 52 protein; NCTC10005_032100.0Showinfo_outline
952017188..2017577PHAGE_Entero_HK140_NC_019710: hypothetical protein; NCTC10005_03211; phage(gi428781967)9.79e-71Showinfo_outline

Region 5, total 57 CDS

#CDS PositionBLAST HitE-ValueSequence
1complement(2371817..2372068)PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage integrase; NCTC10005_03683; phage(gi169257268)5.14e-36Showinfo_outline
22372181..2372432PHAGE_Shigel_Sf6_NC_005344: gene 56 protein; NCTC10005_03684; phage(gi41057344)2.93e-37Showinfo_outline
32372695..2373327PHAGE_Shigel_Sf6_NC_005344: putative transposase OrfB; NCTC10005_03685; phage(gi41057343)5.49e-151Showinfo_outline
42373371..2373838Uncharacterised protein; NCTC10005_036860.0Showinfo_outline
52373838..2374083Uncharacterised protein; NCTC10005_036870.0Showinfo_outline
62374153..2374401PHAGE_Escher_HK639_NC_016158: DNA pol III theta; NCTC10005_03688; phage(gi356870660)8.44e-51Showinfo_outline
72374756..2375301PHAGE_Escher_HK639_NC_016158: NinB; NCTC10005_03689; phage(gi356870662)5.52e-60Showinfo_outline
82375355..2375585PHAGE_Phage_Gifsy_2_NC_010393: NinG; NCTC10005_03690; phage(gi169257288)5.78e-25Showinfo_outline
92375714..2376001PHAGE_Salmon_SPN3UB_NC_019545: NinG; NCTC10005_03691; phage(gi423262439)6.15e-32Showinfo_outline
102375998..2376153PHAGE_Escher_ECML_117_NC_025441: hypothetical protein; NCTC10005_03692; phage(gi725950144)9.95e-08Showinfo_outline
112376289..2376483PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage antiterminator protein Q; NCTC10005_03693; phage(gi169257244)1.87e-15Showinfo_outline
122376657..2376965PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage antiterminator protein Q; NCTC10005_03694; phage(gi169257244)2.47e-20Showinfo_outline
132376962..2377183PHAGE_Cronob_vB_CsaM_GAP161_NC_019398: putative homing endonuclease; NCTC10005_03695; phage(gi414086150)5.84e-16Showinfo_outline
14complement(2377338..2378174)PROPHAGE_Escher_CFT073: insertion element IS2 transposase InsD; NCTC10005_03696; phage(gi26249446)1.63e-122Showinfo_outline
15complement(2378177..2378572)PROPHAGE_Escher_CFT073: transposase insC; NCTC10005_03697; phage(gi26251004)4.63e-56Showinfo_outline
162378885..2378959tRNA0.0Showinfo_outline
172378965..2379038tRNA0.0Showinfo_outline
182379044..2379118tRNA0.0Showinfo_outline
192379306..2379530PHAGE_Entero_phi80_NC_021190: holin; NCTC10005_03702; phage(gi824479635)8.90e-47Showinfo_outline
202379508..2380002PHAGE_Entero_phi80_NC_021190: lysozyme; NCTC10005_03703; phage(gi824479636)3.12e-117Showinfo_outline
212379999..2380238PHAGE_Entero_phi80_NC_021190: endopeptidase; NCTC10005_03704; phage(gi824479637)5.06e-44Showinfo_outline
222380219..2380464PHAGE_Entero_SfI_NC_027339: Rz protein; NCTC10005_03705; phage(gi849250282)6.20e-18Showinfo_outline
232380474..2380758PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC10005_03706; phage(gi356870672)1.17e-38Showinfo_outline
24complement(2380822..2381034)Uncharacterised protein; NCTC10005_037070.0Showinfo_outline
252381223..2381672Uncharacterised protein; NCTC10005_037080.0Showinfo_outline
262381774..2382076Uncharacterised protein; NCTC10005_037090.0Showinfo_outline
272382246..2382620PHAGE_Cronob_ENT47670_NC_019927: putative transposase; NCTC10005_03710; phage(gi431810514)1.02e-67Showinfo_outline
282382650..2383120PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC10005_03711; phage(gi431810521)5.67e-76Showinfo_outline
292383113..2383388PHAGE_Entero_ES18_NC_006949: gp2; NCTC10005_03712; phage(gi62362215)1.78e-29Showinfo_outline
302383342..2383878PHAGE_Salmon_vB_SosS_Oslo_NC_018279: terminase large subunit; NCTC10005_03713; phage(gi399528760)4.83e-125Showinfo_outline
312383912..2384364PHAGE_Salmon_vB_SosS_Oslo_NC_018279: terminase large subunit; NCTC10005_03714; phage(gi399528760)6.49e-99Showinfo_outline
322384426..2384614Uncharacterised protein; NCTC10005_037150.0Showinfo_outline
332384684..2386033PHAGE_Salmon_vB_SosS_Oslo_NC_018279: portal protein; NCTC10005_03716; phage(gi399528761)0.0Showinfo_outline
342385993..2386919PHAGE_Salmon_vB_SosS_Oslo_NC_018279: putative head morphogenesis protein; NCTC10005_03717; phage(gi399528762)0.0Showinfo_outline
352386923..2388245PHAGE_Pseudo_YMC11/07/P54_PAE_BP_NC_030909: membrane-associated initiation of head vertex; NCTC10005_03718; phage(gi100034)0.0Showinfo_outline
362388258..2388707PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; NCTC10005_03719; phage(gi423262383)7.36e-88Showinfo_outline
372388787..2389260PHAGE_Entero_ES18_NC_006949: gp9; NCTC10005_03720; phage(gi62362222)2.63e-94Showinfo_outline
382389467..2389799PHAGE_Pseudo_phi297_NC_016762: putative coat protein; NCTC10005_03721; phage(gi374531291)1.47e-50Showinfo_outline
392389809..2390102PHAGE_Entero_ES18_NC_006949: gp10; NCTC10005_03722; phage(gi62362223)1.96e-27Showinfo_outline
402390165..2390566PHAGE_Entero_ES18_NC_006949: gp11; NCTC10005_03723; phage(gi62362224)2.14e-72Showinfo_outline
412390566..2390739PHAGE_Entero_ES18_NC_006949: gp12; NCTC10005_03724; phage(gi62362225)4.76e-16Showinfo_outline
422390739..2391089PHAGE_Mannhe_vB_MhS_535AP2_NC_028853: hypothetical protein; NCTC10005_03725; phage(gi971749596)2.06e-31Showinfo_outline
432391104..2391292Uncharacterised protein; NCTC10005_037260.0Showinfo_outline
442391335..2391703PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC10005_03727; phage(gi431810532)4.30e-50Showinfo_outline
452391700..2392083PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC10005_03728; phage(gi431810530)4.15e-52Showinfo_outline
462392142..2392897PHAGE_Cronob_ENT47670_NC_019927: major tail subunit; NCTC10005_03729; phage(gi431810520)3.38e-42Showinfo_outline
472392948..2393691PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC10005_03730; phage(gi431810508)2.77e-79Showinfo_outline
482393764..2394138PHAGE_Salmon_SEN5_NC_028701: hypothetical protein; NCTC10005_03731; phage(gi966201587)9.70e-34Showinfo_outline
492394196..2396496PHAGE_Cronob_ENT47670_NC_019927: putative tail protein; NCTC10005_03732; phage(gi431810494)5.73e-109Showinfo_outline
502396496..2396993PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC10005_03733; phage(gi431810519)5.06e-108Showinfo_outline
512396993..2397463PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC10005_03734; phage(gi431810518)7.25e-105Showinfo_outline
522397426..2397842PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC10005_03735; phage(gi431810526)9.85e-88Showinfo_outline
532397839..2399686PHAGE_Cronob_ENT47670_NC_019927: putative tail protein; NCTC10005_03736; phage(gi431810495)0.0Showinfo_outline
542399691..2400308PHAGE_Cronob_ENT47670_NC_019927: putative tail protein; NCTC10005_03737; phage(gi431810495)1.00e-131Showinfo_outline
552400367..2402349PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC10005_03738; phage(gi431810496)1.07e-63Showinfo_outline
56complement(2402378..2404147)Uncharacterised protein; NCTC10005_037390.0Showinfo_outline
57complement(2404144..2405097)PHAGE_Entero_ST104_NC_005841: GtrB; NCTC10005_03740; phage(gi46358650)8.72e-69Showinfo_outline

Region 6, total 48 CDS

#CDS PositionBLAST HitE-ValueSequence
12709917..2709932attL0.0Showinfo_outline
2complement(2716635..2717753)PHAGE_Entero_HK022_NC_002166: integrase; NCTC10005_04167; phage(gi9634144)3.92e-60Showinfo_outline
3complement(2717728..2717991)excisionase for prophage; NCTC10005_041680.0Showinfo_outline
4complement(2718052..2718294)PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; NCTC10005_04169; phage(gi169257270)1.55e-17Showinfo_outline
5complement(2718281..2719999)PHAGE_Phage_Gifsy_2_NC_010393: putatitive bacteriophage exodeoxyribonuclease VIII; NCTC10005_04170; phage(gi169257272)1.39e-31Showinfo_outline
6complement(2720022..2720183)putative exodeoxyribonuclease VIII; NCTC10005_041710.0Showinfo_outline
7complement(2720406..2720678)PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; NCTC10005_04172; phage(gi169257273)2.78e-10Showinfo_outline
8complement(2721308..2721508)PHAGE_Shigel_Ss_VASD_NC_028685: hypothetical protein; NCTC10005_04173; phage(gi966200439)2.20e-05Showinfo_outline
92721796..2721807attL0.0Showinfo_outline
10complement(2721827..2722051)putative repressor protein; NCTC10005_041740.0Showinfo_outline
11complement(2722005..2722223)putative repressor protein; NCTC10005_041750.0Showinfo_outline
122722318..2722602Uncharacterised protein; NCTC10005_041760.0Showinfo_outline
132722577..2723026Protein of uncharacterised function (DUF1019); NCTC10005_041770.0Showinfo_outline
142723041..2723571PHAGE_Burkho_BcepIL02_NC_012743: putative DNA replication protein; NCTC10005_04178; phage(gi238801636)1.83e-37Showinfo_outline
152724014..2724754PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA replication protein; NCTC10005_04179; phage(gi169257280)1.14e-133Showinfo_outline
162724772..2725059PHAGE_Shigel_Stx_NC_029120: hypothetical protein; NCTC10005_04180; phage(gi985761264)2.14e-06Showinfo_outline
172725025..2725429Protein of uncharacterised function (DUF1627); NCTC10005_041810.0Showinfo_outline
182725630..2726103PHAGE_Pectob_ZF40_NC_019522: putative methylase; NCTC10005_04182; phage(gi422936660)2.11e-84Showinfo_outline
192726107..2726454PHAGE_Escher_phiV10_NC_007804: hypothetical protein; NCTC10005_04183; phage(gi89152467)1.26e-09Showinfo_outline
202726641..2726964PHAGE_Entero_mEp390_NC_019721: hypothetical protein; NCTC10005_04184; phage(gi428782690)2.39e-40Showinfo_outline
212727086..2727304Uncharacterised protein; NCTC10005_041850.0Showinfo_outline
222727449..2727742PHAGE_Burkho_Bcep22_NC_005262: hypothetical protein; NCTC10005_04186; phage(gi38640327)7.94e-28Showinfo_outline
232727735..2728091PHAGE_Entero_HK225_NC_019717: endodeoxyribonuclease; NCTC10005_04187; phage(gi428782440)2.27e-50Showinfo_outline
242728088..2728288PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; NCTC10005_04188; phage(gi23505493)1.11e-16Showinfo_outline
252728233..2728694PHAGE_Pectob_ZF40_NC_019522: hypothetical protein; NCTC10005_04189; phage(gi422936665)1.67e-61Showinfo_outline
262729084..2729272PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; NCTC10005_04190; phage(gi401817565)1.23e-23Showinfo_outline
272729276..2730106PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; NCTC10005_04191; phage(gi401817564)9.35e-165Showinfo_outline
282730427..2730618PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; NCTC10005_04192; phage(gi169257242)3.45e-33Showinfo_outline
292731234..2731623PHAGE_Entero_mEp390_NC_019721: putative holin; NCTC10005_04194; phage(gi428782712)5.79e-45Showinfo_outline
302731613..2731891PHAGE_Entero_mEp390_NC_019721: putative holin; NCTC10005_04195; phage(gi428782713)2.93e-38Showinfo_outline
312731891..2732520PHAGE_Escher_HK639_NC_016158: endochitinase; NCTC10005_04196; phage(gi356870669)1.29e-142Showinfo_outline
322732528..2732803PHAGE_Entero_mEp390_NC_019721: hypothetical protein; NCTC10005_04197; phage(gi428782715)5.85e-50Showinfo_outline
332732748..2732927PHAGE_Entero_mEp390_NC_019721: hypothetical protein; NCTC10005_04198; phage(gi428782716)9.86e-24Showinfo_outline
34complement(2732937..2733518)Uncharacterised protein; NCTC10005_041990.0Showinfo_outline
352733591..2735048PHAGE_Entero_mEp390_NC_019721: hypothetical protein; NCTC10005_04200; phage(gi428782718)0.0Showinfo_outline
362735060..2735395Uncharacterised protein; NCTC10005_042010.0Showinfo_outline
37complement(2735349..2735606)PHAGE_Entero_HK633_NC_019719: hypothetical protein; NCTC10005_04202; phage(gi428782586)3.24e-48Showinfo_outline
38complement(2735557..2736057)Uncharacterised protein; NCTC10005_042030.0Showinfo_outline
392736311..2736799PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, small subunit; NCTC10005_04204; phage(gi169257298)8.78e-42Showinfo_outline
402736799..2738313PHAGE_Entero_c_1_NC_019706: terminase large subunit; NCTC10005_04205; phage(gi428781737)0.0Showinfo_outline
412738342..2738899PHAGE_Entero_c_1_NC_019706: terminase large subunit; NCTC10005_04206; phage(gi428781737)3.33e-123Showinfo_outline
422738896..2739111PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; NCTC10005_04207; phage(gi169257300)6.74e-16Showinfo_outline
432739108..2740607PHAGE_Entero_c_1_NC_019706: portal protein; NCTC10005_04208; phage(gi428781739)0.0Showinfo_outline
442740552..2741139PHAGE_Entero_c_1_NC_019706: head maturation protease; NCTC10005_04209; phage(gi428781740)3.34e-83Showinfo_outline
452741087..2742322PHAGE_Stx2_c_86_NC_008464: integrase; NCTC10005_04210; phage(gi116222028)1.36e-54Showinfo_outline
462742324..2742548PHAGE_Entero_P4_NC_001609: transcriptional regulator; NCTC10005_04211; phage(gi9627517)7.30e-07Showinfo_outline
472747769..2747780attR0.0Showinfo_outline
482747852..2747867attR0.0Showinfo_outline

Region 7, total 42 CDS

#CDS PositionBLAST HitE-ValueSequence
12743337..2743348attL0.0Showinfo_outline
22746970..2747458PHAGE_Entero_VT2_Sakai_NC_000902: hypothetical protein; NCTC10005_04219; phage(gi9633418)3.14e-10Showinfo_outline
32747958..2748170Uncharacterised protein; NCTC10005_042200.0Showinfo_outline
42748167..2749090PHAGE_Entero_c_1_NC_019706: head maturation protease; NCTC10005_04221; phage(gi428781740)8.13e-133Showinfo_outline
52749087..2749839PHAGE_Entero_c_1_NC_019706: head maturation protease; NCTC10005_04222; phage(gi428781740)4.79e-81Showinfo_outline
62749845..2750081PHAGE_Entero_c_1_NC_019706: head maturation protease; NCTC10005_04223; phage(gi428781740)4.57e-33Showinfo_outline
72750472..2750576Uncharacterised protein; NCTC10005_042240.0Showinfo_outline
8complement(2750573..2751163)PROPHAGE_Shigel_301: insertion element IS2 transposase InsD; NCTC10005_04225; phage(gi24114950)1.06e-93Showinfo_outline
9complement(2751187..2751408)PROPHAGE_Escher_CFT073: transposase insD; NCTC10005_04226; phage(gi26251005)6.63e-16Showinfo_outline
10complement(2751411..2751806)PROPHAGE_Escher_CFT073: transposase insC; NCTC10005_04227; phage(gi26251004)4.63e-56Showinfo_outline
112751933..2752415PHAGE_Entero_HK225_NC_019717: tail assembly protein I; NCTC10005_04228; phage(gi428782395)3.11e-89Showinfo_outline
12complement(2752466..2753119)Uncharacterised protein; NCTC10005_042290.0Showinfo_outline
132753250..2754902PHAGE_Entero_c_1_NC_019706: head maturation protease; NCTC10005_04230; phage(gi428781740)0.0Showinfo_outline
142754984..2755310PHAGE_Entero_c_1_NC_019706: hypothetical protein; NCTC10005_04231; phage(gi428781741)2.13e-63Showinfo_outline
152755588..2755884PHAGE_Entero_mEp237_NC_019704: minor tail protein Z; NCTC10005_04232; phage(gi435439275)3.14e-41Showinfo_outline
162756140..2756538PHAGE_Entero_mEp237_NC_019704: minor tail protein U; NCTC10005_04233; phage(gi435439276)2.13e-46Showinfo_outline
172756546..2757283PHAGE_Entero_mEp237_NC_019704: major tail protein V; NCTC10005_04234; phage(gi435439277)4.71e-173Showinfo_outline
182757322..2757744PHAGE_Entero_mEp237_NC_019704: minor tail protein G; NCTC10005_04235; phage(gi435439278)7.95e-88Showinfo_outline
192757753..2758073PHAGE_Entero_mEp237_NC_019704: tail assembly protein GT; NCTC10005_04236; phage(gi435439279)3.33e-67Showinfo_outline
202758051..2759721PHAGE_Entero_mEp237_NC_019704: tail length tape measure protein; NCTC10005_04237; phage(gi435439280)0.0Showinfo_outline
212760015..2760158PHAGE_Entero_mEp237_NC_019704: tail length tape measure protein; NCTC10005_04238; phage(gi435439280)4.96e-21Showinfo_outline
222760327..2760560PHAGE_Entero_mEp237_NC_019704: tail length tape measure protein; NCTC10005_04239; phage(gi435439280)1.04e-29Showinfo_outline
232760566..2760778PHAGE_Entero_mEp237_NC_019704: minor tail protein; NCTC10005_04240; phage(gi435439281)1.77e-32Showinfo_outline
242760909..2761664PHAGE_Entero_mEp237_NC_019704: minor tail protein L; NCTC10005_04241; phage(gi435439282)0.0Showinfo_outline
252761666..2762055PHAGE_Entero_mEp237_NC_019704: minor tail protein; NCTC10005_04242; phage(gi435439283)4.75e-88Showinfo_outline
262762055..2762396PHAGE_Entero_mEp237_NC_019704: minor tail protein; NCTC10005_04243; phage(gi435439283)2.65e-80Showinfo_outline
272762384..2762974PHAGE_Entero_mEp237_NC_019704: tail assembly protein I; NCTC10005_04244; phage(gi435439284)1.01e-102Showinfo_outline
282763230..2765155PHAGE_Entero_mEp237_NC_019704: central tail fiber; NCTC10005_04245; phage(gi435439285)0.0Showinfo_outline
292765209..2765403PHAGE_Entero_HK97_NC_002167: tail fiber; NCTC10005_04246; phage(gi9634161)1.60e-30Showinfo_outline
302765438..2766316PHAGE_Entero_mEp237_NC_019704: central tail fiber; NCTC10005_04247; phage(gi435439285)2.12e-24Showinfo_outline
312766334..2766849PHAGE_Entero_HK97_NC_002167: tail fiber; NCTC10005_04248; phage(gi9634161)5.69e-53Showinfo_outline
322766851..2767237PHAGE_Entero_F20_NC_043469: membrane-associated initiation of head vertex; NCTC10005_04249; phage(gi100034)3.56e-11Showinfo_outline
332767640..2767813Uncharacterised protein; NCTC10005_042500.0Showinfo_outline
342767874..2768362PHAGE_Entero_HK542_NC_019769: tail fiber; NCTC10005_04251; phage(gi428783368)2.01e-40Showinfo_outline
352768806..2769081PHAGE_Bacill_Shbh1_NC_030925: Tk thymidine kinase; NCTC10005_04252; phage(gi100137)1.55e-06Showinfo_outline
36complement(2769068..2769472)PHAGE_Escher_172_1_NC_028903: tail fibers protein; NCTC10005_04253; phage(gi971754340)4.26e-06Showinfo_outline
372769721..2769732attR0.0Showinfo_outline
382769797..2770315PHAGE_Salmon_Fels_2_NC_010463: DNA-invertase; NCTC10005_04254; phage(gi169936026)7.90e-91Showinfo_outline
39complement(2771035..2771193)Uncharacterised protein; NCTC10005_042550.0Showinfo_outline
40complement(2771186..2771425)PHAGE_Entero_mEp237_NC_019704: virulence protein MsgA; NCTC10005_04256; phage(gi435439290)7.77e-46Showinfo_outline
412771734..2772003PHAGE_Salmon_Fels_2_NC_010463: DNA-invertase; NCTC10005_04257; phage(gi169936026)1.50e-33Showinfo_outline
42complement(2772013..2772333)PHAGE_Entero_VT2_Sakai_NC_000902: hypothetical protein; NCTC10005_04258; phage(gi9633476)1.23e-07Showinfo_outline

Region 8, total 17 CDS

#CDS PositionBLAST HitE-ValueSequence
13839890..3839901attL0.0Showinfo_outline
23852861..3854252PHAGE_Bacill_G_NC_023719: gp245; NCTC10005_05765; phage(gi593777701)5.03e-07Showinfo_outline
33854345..3854581cysteine/glutathione ABC transporter membrane /ATP-binding protein; NCTC10005_057660.0Showinfo_outline
43854627..3854950leucyl/phenylalanyl-tRNA--protein transferase; NCTC10005_057670.0Showinfo_outline
53855027..3855332leucyl/phenylalanyl-tRNA--protein transferase; NCTC10005_057680.0Showinfo_outline
63855618..3855836translation initiation factor IF-1; NCTC10005_057690.0Showinfo_outline
73855957..3856109Uncharacterised protein; NCTC10005_057700.0Showinfo_outline
8complement(3856124..3857707)PHAGE_Agroba_Atu_ph07_NC_042013: putative virion structural protein; NCTC10005_05771; phage(gi100292)2.77e-171Showinfo_outline
9complement(3857683..3858402)PHAGE_Agroba_Atu_ph07_NC_042013: putative virion structural protein; NCTC10005_05772; phage(gi100292)1.54e-16Showinfo_outline
10complement(3858430..3858750)PHAGE_Pectob_CBB_NC_041878: putative major capsid protein; NCTC10005_05773; phage(gi100319)5.74e-08Showinfo_outline
113859018..3859239PHAGE_Lactoc_bIL312_NC_002671: Csp; NCTC10005_05774; phage(gi13095918)4.57e-18Showinfo_outline
12complement(3859310..3861250)PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; NCTC10005_05775; phage(gi371496158)4.37e-43Showinfo_outline
13complement(3861234..3862361)macrolide-specific efflux protein macA; NCTC10005_057760.0Showinfo_outline
143862521..3863477protein YbjX; NCTC10005_057770.0Showinfo_outline
15complement(3863474..3865132)PHAGE_Entero_P2_NC_001895: Old; NCTC10005_05778; phage(gi9630369)1.73e-06Showinfo_outline
163865044..3865055attR0.0Showinfo_outline
17complement(3865394..3865936)PROPHAGE_Escher_CFT073: transposase insF; NCTC10005_05779; phage(gi26250329)8.24e-130Showinfo_outline

Region 9, total 44 CDS

#CDS PositionBLAST HitE-ValueSequence
13914271..3914286attL0.0Showinfo_outline
23916900..3916913attL0.0Showinfo_outline
3complement(3918875..3920551)PHAGE_Haemop_HP2_NC_003315: orf35; NCTC10005_05843; phage(gi17981851)2.52e-151Showinfo_outline
4complement(3920554..3921102)PHAGE_Haemop_HP2_NC_003315: orf34; NCTC10005_05844; phage(gi17981850)7.78e-32Showinfo_outline
5complement(3921074..3921799)PHAGE_Haemop_HP2_NC_003315: orf33; NCTC10005_05845; phage(gi17981849)3.85e-17Showinfo_outline
63922601..3922903PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; NCTC10005_05847; phage(gi24373865)4.65e-10Showinfo_outline
73923116..3923769PHAGE_Shigel_Sf6_NC_005344: putative transposase OrfB; NCTC10005_05848; phage(gi41057343)1.93e-158Showinfo_outline
8complement(3923775..3925757)PHAGE_Haemop_HP2_NC_003315: tail fibers; NCTC10005_05849; phage(gi17981847)4.19e-78Showinfo_outline
9complement(3925767..3926354)PHAGE_Haemop_HP2_NC_003315: orf30; NCTC10005_05850; phage(gi17981846)1.31e-57Showinfo_outline
10complement(3926347..3927531)PHAGE_Haemop_HP2_NC_003315: orf29; NCTC10005_05851; phage(gi17981845)2.98e-145Showinfo_outline
11complement(3927528..3927857)PHAGE_Haemop_HP2_NC_003315: orf28; NCTC10005_05852; phage(gi17981844)4.93e-35Showinfo_outline
12complement(3927854..3930166)PHAGE_Haemop_HP2_NC_003315: orf27; NCTC10005_05853; phage(gi17981843)9.90e-92Showinfo_outline
13complement(3930354..3930614)PHAGE_Haemop_HP2_NC_003315: orf26; NCTC10005_05854; phage(gi17981842)3.39e-17Showinfo_outline
14complement(3930734..3931102)PHAGE_Erwini_vB_Eam_MM7_NC_041978: hypothetical protein; NCTC10005_05855; phage(gi100099)1.69e-12Showinfo_outline
15complement(3931102..3931443)PHAGE_Pseudo_PaP2_NC_005884: hypothetical protein; NCTC10005_05856; phage(gi48697087)1.42e-30Showinfo_outline
16complement(3931440..3931736)PHAGE_Burkho_KS9_NC_013055: holin gp22; NCTC10005_05857; phage(gi255033753)3.47e-20Showinfo_outline
17complement(3931745..3932200)PHAGE_Aeromo_phiO18P_NC_009542: putative tail tube protein; NCTC10005_05858; phage(gi148727159)2.53e-64Showinfo_outline
18complement(3932197..3933141)PHAGE_Haemop_HP2_NC_003315: tail sheath; NCTC10005_05859; phage(gi17981837)1.28e-109Showinfo_outline
19complement(3933150..3933323)PHAGE_Haemop_HP2_NC_003315: tail sheath; NCTC10005_05860; phage(gi17981837)2.10e-08Showinfo_outline
20complement(3933320..3933517)PHAGE_Aeromo_phiO18P_NC_009542: putative tail completion protein; NCTC10005_05861; phage(gi148727157)1.21e-15Showinfo_outline
21complement(3933526..3934026)PHAGE_Aeromo_phiO18P_NC_009542: putative tail completion protein; NCTC10005_05862; phage(gi148727157)2.46e-14Showinfo_outline
22complement(3934023..3934529)PHAGE_Haemop_HP2_NC_003315: orf21; NCTC10005_05863; phage(gi17981835)2.12e-14Showinfo_outline
23complement(3934526..3934978)PHAGE_Haemop_HP2_NC_003315: packaging protein; NCTC10005_05864; phage(gi17981834)2.12e-30Showinfo_outline
24complement(3935077..3935388)PHAGE_Aeromo_phiO18P_NC_009542: terminase endonuclease subunit; NCTC10005_05865; phage(gi148727154)1.11e-27Showinfo_outline
25complement(3935342..3935779)PHAGE_Aeromo_phiO18P_NC_009542: terminase endonuclease subunit; NCTC10005_05866; phage(gi148727154)1.11e-20Showinfo_outline
26complement(3935783..3936805)PHAGE_Aeromo_phiO18P_NC_009542: capsid protein; NCTC10005_05867; phage(gi148727153)1.08e-112Showinfo_outline
27complement(3936865..3937659)PHAGE_Haemop_HP2_NC_003315: capsid-scaffolding protein; NCTC10005_05868; phage(gi17981831)4.45e-40Showinfo_outline
283937789..3937802attR0.0Showinfo_outline
293937832..3939607PHAGE_Haemop_HP2_NC_003315: terminase ATPase subunit; NCTC10005_05869; phage(gi17981830)0.0Showinfo_outline
303939604..3940656PHAGE_Haemop_HP2_NC_003315: portal vertex protein; NCTC10005_05870; phage(gi17981829)1.12e-105Showinfo_outline
313940707..3940976PHAGE_Vibrio_K139_NC_003313: zinc-finger protein; NCTC10005_05871; phage(gi17975123)2.03e-25Showinfo_outline
32complement(3940950..3941195)PHAGE_Salmon_RE_2010_NC_019488: hypothetical protein; NCTC10005_05872; phage(gi418489693)4.18e-09Showinfo_outline
33complement(3941281..3943305)PHAGE_Salmon_SEN5_NC_028701: replication protein; NCTC10005_05873; phage(gi966201551)3.39e-158Showinfo_outline
34complement(3943298..3943510)Uncharacterised protein; NCTC10005_058740.0Showinfo_outline
35complement(3943507..3944373)PHAGE_Salmon_RE_2010_NC_019488: DNA adenine methyltransferase; NCTC10005_05875; phage(gi418489691)1.79e-93Showinfo_outline
36complement(3944364..3944597)PHAGE_Salmon_Fels_2_NC_010463: hypothetical protein; NCTC10005_05876; phage(gi169936057)4.13e-05Showinfo_outline
37complement(3944664..3945065)Uncharacterised protein; NCTC10005_058770.0Showinfo_outline
38complement(3945065..3945493)Uncharacterised protein; NCTC10005_058780.0Showinfo_outline
39complement(3945483..3945677)Uncharacterised protein; NCTC10005_058790.0Showinfo_outline
40complement(3945687..3946190)PHAGE_Salmon_Fels_2_NC_010463: bacteriophage regulatory protein CII; NCTC10005_05880; phage(gi169936061)2.59e-49Showinfo_outline
41complement(3946223..3946444)putative regulator for prophage; NCTC10005_058810.0Showinfo_outline
423946581..3947201PHAGE_Salmon_Fels_2_NC_010463: P2 CI-like protein; NCTC10005_05882; phage(gi169936063)7.69e-38Showinfo_outline
433947280..3948329PHAGE_Salmon_SEN1_NC_029003: integrase; NCTC10005_05883; phage(gi971764936)6.80e-131Showinfo_outline
443962210..3962225attR0.0Showinfo_outline

Region 10, total 87 CDS

#CDS PositionBLAST HitE-ValueSequence
14279548..4279596attL0.0Showinfo_outline
24281555..4283054PHAGE_Salmon_SPN9CC_NC_017985: O-antigen conversion translocase; NCTC10005_06361; phage(gi389060489)7.51e-38Showinfo_outline
3complement(4283083..4284672)Uncharacterised protein; NCTC10005_063620.0Showinfo_outline
4complement(4284957..4287593)PHAGE_Cronob_ENT47670_NC_019927: putative tail protein; NCTC10005_06363; phage(gi431810495)0.0Showinfo_outline
5complement(4287580..4287972)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC10005_06364; phage(gi431810526)1.12e-81Showinfo_outline
6complement(4287982..4288452)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC10005_06365; phage(gi431810518)3.34e-105Showinfo_outline
7complement(4288480..4288950)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC10005_06366; phage(gi431810519)1.19e-96Showinfo_outline
8complement(4288975..4289346)PHAGE_Cronob_ENT47670_NC_019927: putative tail protein; NCTC10005_06367; phage(gi431810494)4.12e-45Showinfo_outline
9complement(4289343..4290971)PHAGE_Vibrio_pYD38_A_NC_021534: tail length tape measure protein; NCTC10005_06368; phage(gi514051037)7.52e-145Showinfo_outline
10complement(4291934..4292404)PHAGE_Vibrio_pYD38_A_NC_021534: tail length tape measure protein; NCTC10005_06369; phage(gi514051037)7.89e-71Showinfo_outline
11complement(4292463..4292702)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC10005_06370; phage(gi431810508)2.48e-26Showinfo_outline
12complement(4293399..4293734)PHAGE_Cronob_ENT47670_NC_019927: major tail subunit; NCTC10005_06371; phage(gi431810520)3.13e-42Showinfo_outline
13complement(4294026..4294409)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC10005_06372; phage(gi431810530)1.03e-50Showinfo_outline
14complement(4294524..4294775)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC10005_06373; phage(gi431810532)5.91e-26Showinfo_outline
15complement(4294778..4295137)PHAGE_Mannhe_vB_MhS_535AP2_NC_028853: hypothetical protein; NCTC10005_06374; phage(gi971749596)7.91e-32Showinfo_outline
16complement(4295137..4295292)Uncharacterised protein; NCTC10005_063750.0Showinfo_outline
17complement(4295289..4295459)PHAGE_Salmon_vB_SosS_Oslo_NC_018279: hypothetical protein; NCTC10005_06376; phage(gi399528768)2.47e-15Showinfo_outline
18complement(4295459..4295860)PHAGE_Salmon_vB_SosS_Oslo_NC_018279: hypothetical protein; NCTC10005_06377; phage(gi399528767)1.12e-71Showinfo_outline
19complement(4295909..4296214)PHAGE_Entero_ES18_NC_006949: gp10; NCTC10005_06378; phage(gi62362223)1.06e-26Showinfo_outline
20complement(4296175..4296495)PHAGE_Pseudo_phi297_NC_016762: putative coat protein; NCTC10005_06379; phage(gi374531291)1.98e-12Showinfo_outline
21complement(4296492..4296995)PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; NCTC10005_06380; phage(gi423262384)3.00e-106Showinfo_outline
22complement(4296962..4297174)PHAGE_Entero_ES18_NC_006949: gp9; NCTC10005_06381; phage(gi62362222)6.41e-26Showinfo_outline
23complement(4297171..4297296)Uncharacterised protein; NCTC10005_063820.0Showinfo_outline
24complement(4297314..4297763)PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; NCTC10005_06383; phage(gi423262383)7.36e-88Showinfo_outline
25complement(4297775..4298473)PHAGE_Salmon_vB_SosS_Oslo_NC_018279: hypothetical protein; NCTC10005_06384; phage(gi399528763)3.95e-141Showinfo_outline
26complement(4298473..4298718)PHAGE_Pseudo_YMC11/07/P54_PAE_BP_NC_030909: membrane-associated initiation of head vertex; NCTC10005_06385; phage(gi100034)2.25e-29Showinfo_outline
27complement(4298672..4298920)PHAGE_Pseudo_YMC11/07/P54_PAE_BP_NC_030909: membrane-associated initiation of head vertex; NCTC10005_06386; phage(gi100034)3.30e-40Showinfo_outline
28complement(4298932..4299099)PHAGE_Pseudo_YMC11/07/P54_PAE_BP_NC_030909: membrane-associated initiation of head vertex; NCTC10005_06387; phage(gi100034)1.64e-14Showinfo_outline
29complement(4299103..4300029)PHAGE_Salmon_vB_SosS_Oslo_NC_018279: putative head morphogenesis protein; NCTC10005_06388; phage(gi399528762)0.0Showinfo_outline
30complement(4299989..4300159)PHAGE_Salmon_vB_SosS_Oslo_NC_018279: portal protein; NCTC10005_06389; phage(gi399528761)3.86e-19Showinfo_outline
31complement(4300238..4301011)PHAGE_Salmon_vB_SosS_Oslo_NC_018279: portal protein; NCTC10005_06390; phage(gi399528761)1.01e-121Showinfo_outline
32complement(4301147..4301335)PHAGE_Salmon_vB_SosS_Oslo_NC_018279: portal protein; NCTC10005_06391; phage(gi399528761)6.10e-09Showinfo_outline
33complement(4301406..4301594)Uncharacterised protein; NCTC10005_063920.0Showinfo_outline
34complement(4301680..4302033)PHAGE_Salmon_vB_SosS_Oslo_NC_018279: terminase large subunit; NCTC10005_06393; phage(gi399528760)6.80e-64Showinfo_outline
35complement(4302511..4302903)PHAGE_Salmon_SPN3UB_NC_019545: terminase large subunit; NCTC10005_06394; phage(gi423262379)6.57e-54Showinfo_outline
36complement(4302896..4303060)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC10005_06395; phage(gi431810521)1.99e-13Showinfo_outline
37complement(4303384..4303833)PHAGE_Cronob_ENT47670_NC_019927: putative transposase; NCTC10005_06396; phage(gi431810514)6.26e-84Showinfo_outline
38complement(4303851..4304021)PHAGE_Pectob_ZF40_NC_019522: putative transposase; NCTC10005_06397; phage(gi422936679)3.48e-09Showinfo_outline
39complement(4304033..4304212)Uncharacterised protein; NCTC10005_063980.0Showinfo_outline
40complement(4304187..4304405)Uncharacterised protein; NCTC10005_063990.0Showinfo_outline
41complement(4304584..4305111)PHAGE_Salmon_SE1_NC_011802: hypothetical protein; NCTC10005_06400; phage(gi219681238)1.47e-71Showinfo_outline
42complement(4305361..4305822)PHAGE_Entero_phi80_NC_021190: endopeptidase; NCTC10005_06401; phage(gi824479637)5.27e-81Showinfo_outline
43complement(4305819..4306313)PHAGE_Entero_phi80_NC_021190: lysozyme; NCTC10005_06402; phage(gi824479636)3.12e-117Showinfo_outline
44complement(4306291..4306515)PHAGE_Entero_phi80_NC_021190: holin; NCTC10005_06403; phage(gi824479635)8.90e-47Showinfo_outline
45complement(4306704..4306778)tRNA0.0Showinfo_outline
46complement(4306784..4306857)tRNA0.0Showinfo_outline
47complement(4306863..4306937)tRNA0.0Showinfo_outline
48complement(4307036..4307521)PHAGE_Klebsi_vB_KpnM_KpV52_NC_041900: hypothetical protein; NCTC10005_06408; phage(gi100058)9.80e-53Showinfo_outline
49complement(4307518..4308195)PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage antiterminator protein Q; NCTC10005_06409; phage(gi169257244)1.05e-88Showinfo_outline
50complement(4308192..4308308)Uncharacterised protein; NCTC10005_064100.0Showinfo_outline
51complement(4308305..4308937)PHAGE_Salmon_SPN3UB_NC_019545: NinG; NCTC10005_06411; phage(gi423262439)1.57e-75Showinfo_outline
52complement(4308930..4309100)PHAGE_Entero_HK225_NC_019717: NinE protein; NCTC10005_06412; phage(gi428782437)7.61e-26Showinfo_outline
53complement(4309093..4309542)PHAGE_Salmon_vB_SosS_Oslo_NC_018279: NinB protein; NCTC10005_06413; phage(gi399528821)1.17e-42Showinfo_outline
54complement(4309727..4309948)PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC10005_06414; phage(gi356870661)4.35e-46Showinfo_outline
55complement(4309951..4310193)PHAGE_Escher_HK639_NC_016158: DNA pol III theta; NCTC10005_06415; phage(gi356870660)2.54e-51Showinfo_outline
56complement(4310409..4311035)PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC10005_06416; phage(gi356870659)4.04e-55Showinfo_outline
57complement(4311141..4311590)PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC10005_06417; phage(gi428782345)1.29e-46Showinfo_outline
58complement(4311587..4311781)PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC10005_06418; phage(gi356870658)1.67e-33Showinfo_outline
59complement(4311815..4312351)PHAGE_Escher_HK639_NC_016158: eae-like protein; NCTC10005_06419; phage(gi356870657)9.69e-50Showinfo_outline
60complement(4312562..4312660)Uncharacterised protein; NCTC10005_064200.0Showinfo_outline
61complement(4312650..4314023)PHAGE_Erwini_phiEt88_NC_015295: Replicative DNA helicase; NCTC10005_06421; phage(gi327198610)0.0Showinfo_outline
62complement(4314020..4314409)PHAGE_Erwini_phiEt88_NC_015295: phage replication protein O; NCTC10005_06422; phage(gi327198609)7.49e-46Showinfo_outline
63complement(4314724..4315104)PHAGE_Salmon_SEN34_NC_028699: replication protein O; NCTC10005_06423; phage(gi966201463)2.00e-58Showinfo_outline
64complement(4315091..4315258)PHAGE_Entero_HK446_NC_019714: hypothetical protein; NCTC10005_06424; phage(gi428782236)1.92e-22Showinfo_outline
65complement(4315316..4315888)PHAGE_Entero_HK225_NC_019717: CII protein; NCTC10005_06425; phage(gi428782424)1.54e-130Showinfo_outline
66complement(4315918..4316151)PHAGE_Escher_HK639_NC_016158: cro; NCTC10005_06426; phage(gi356870651)1.53e-25Showinfo_outline
674316190..4316672PHAGE_Erwini_phiEt88_NC_015295: phage repressor protein; NCTC10005_06427; phage(gi327198606)5.93e-48Showinfo_outline
684316719..4316961PHAGE_Entero_HK225_NC_019717: prophage repressor; NCTC10005_06428; phage(gi428782422)9.20e-26Showinfo_outline
694317122..4317268Uncharacterised protein; NCTC10005_064290.0Showinfo_outline
704317526..4317876Uncharacterised protein; NCTC10005_064300.0Showinfo_outline
714317881..4318111Uncharacterised protein; NCTC10005_064310.0Showinfo_outline
724318276..4318632PHAGE_Entero_Sf101_NC_027398: hypothetical protein; NCTC10005_06432; phage(gi849122295)1.95e-06Showinfo_outline
734318629..4318787PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC10005_06433; phage(gi356870642)1.20e-27Showinfo_outline
744318784..4318990PHAGE_Escher_P13374_NC_018846: host killing protein; NCTC10005_06434; phage(gi410491620)7.18e-16Showinfo_outline
754319069..4319353PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC10005_06435; phage(gi356870640)7.68e-65Showinfo_outline
764319372..4320217PHAGE_Ralsto_RSK1_NC_022915: putative phage recombination protein; NCTC10005_06436; phage(gi560186064)2.07e-81Showinfo_outline
774320214..4320894PHAGE_Entero_phi80_NC_021190: phage exonuclease; NCTC10005_06437; phage(gi824479613)1.54e-163Showinfo_outline
784320897..4321361PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC10005_06438; phage(gi356870636)3.42e-27Showinfo_outline
794321358..4321999PHAGE_Escher_HK639_NC_016158: adenine specific methyltransferase; NCTC10005_06439; phage(gi356870635)1.18e-140Showinfo_outline
804321989..4322585PHAGE_Pectob_PP90_NC_031096: hypothetical protein; NCTC10005_06440; phage(gi100006)2.80e-33Showinfo_outline
814322582..4322701Uncharacterised protein; NCTC10005_064410.0Showinfo_outline
824322704..4322895PHAGE_Entero_933W_NC_000924: DksA-like zinc finger domain containing protein; NCTC10005_06442; phage(gi9632545)4.01e-14Showinfo_outline
834322918..4323256PHAGE_Serrat_Eta_NC_021563: hypothetical protein; NCTC10005_06443; phage(gi514361079)3.62e-19Showinfo_outline
844323234..4323437PHAGE_Entero_SfI_NC_027339: hypothetical protein; NCTC10005_06444; phage(gi849250253)3.60e-33Showinfo_outline
854323483..4323809PHAGE_Entero_mEp390_NC_019721: EaA protein; NCTC10005_06445; phage(gi428782695)3.44e-55Showinfo_outline
864324127..4325290PHAGE_Escher_HK639_NC_016158: integrase; NCTC10005_06446; phage(gi356870629)0.0Showinfo_outline
874325302..4325350attR0.0Showinfo_outline

Region 11, total 17 CDS

#CDS PositionBLAST HitE-ValueSequence
1complement(4957287..4958438)PHAGE_Entero_P4_NC_001609: DNA primase; NCTC10005_07336; phage(gi9627512)0.0Showinfo_outline
2complement(4958492..4958956)PHAGE_Entero_P4_NC_001609: DNA primase; NCTC10005_07337; phage(gi9627512)4.42e-77Showinfo_outline
3complement(4959056..4959547)PHAGE_Entero_P4_NC_001609: DNA primase; NCTC10005_07338; phage(gi9627512)5.36e-63Showinfo_outline
4complement(4959636..4959740)PHAGE_Entero_P4_NC_001609: hypothetical protein; NCTC10005_07339; phage(gi9627513)1.65e-13Showinfo_outline
5complement(4959740..4959955)PHAGE_Entero_P4_NC_001609: hypothetical protein; NCTC10005_07340; phage(gi9627513)2.06e-18Showinfo_outline
6complement(4959959..4960180)Uncharacterised protein; NCTC10005_073410.0Showinfo_outline
7complement(4960739..4960954)PHAGE_Entero_P4_NC_001609: transcriptional regulator; NCTC10005_07344; phage(gi9627517)1.76e-28Showinfo_outline
84961538..4962281PHAGE_Entero_P4_NC_001609: head size determination protein sid; NCTC10005_07345; phage(gi9627518)3.60e-23Showinfo_outline
94962284..4962502PHAGE_Entero_186_NC_001317: B protein; NCTC10005_07346; phage(gi9634083)2.86e-19Showinfo_outline
104962531..4963094PHAGE_Entero_P4_NC_001609: amber mutation-suppressing protein; NCTC10005_07347; phage(gi9627520)4.37e-76Showinfo_outline
114963501..4964580Uncharacterised protein; NCTC10005_073480.0Showinfo_outline
12complement(4964640..4964849)PHAGE_Entero_HK022_NC_002166: IS903 transposase; NCTC10005_07349; phage(gi9634149)8.95e-42Showinfo_outline
13complement(4964846..4965097)PHAGE_Entero_HK022_NC_002166: IS903 transposase; NCTC10005_07350; phage(gi9634149)8.00e-36Showinfo_outline
14complement(4965118..4965471)PROPHAGE_Shigel_301: insertion element IS2 transposase InsD; NCTC10005_07351; phage(gi24111655)1.27e-50Showinfo_outline
15complement(4965471..4965953)PROPHAGE_Escher_CFT073: transposase insD; NCTC10005_07352; phage(gi26251005)2.86e-73Showinfo_outline
16complement(4965956..4966351)PROPHAGE_Escher_CFT073: transposase insC; NCTC10005_07353; phage(gi26251004)4.63e-56Showinfo_outline
17complement(4966400..4966957)PHAGE_Entero_HK022_NC_002166: IS903 transposase; NCTC10005_07354; phage(gi9634149)1.73e-119Showinfo_outline

Region 12, total 36 CDS

#CDS PositionBLAST HitE-ValueSequence
15117998..5118014attL0.0Showinfo_outline
2complement(5128489..5129304)PHAGE_Achole_L2_NC_001447: integrase; NCTC10005_07583; phage(gi9626516)1.34e-07Showinfo_outline
3complement(5129267..5129455)PROPHAGE_Salmon_CT18: phage integrase; NCTC10005_07584; phage(gi16763128)3.63e-07Showinfo_outline
4complement(5129490..5129876)Protein of uncharacterised function (DUF1528); NCTC10005_075850.0Showinfo_outline
5complement(5129938..5131068)integrating conjugative element relaxase, PFGI-1 class; NCTC10005_075860.0Showinfo_outline
65131130..5131141attL0.0Showinfo_outline
75131229..5131837Uncharacterised protein; NCTC10005_075870.0Showinfo_outline
85132012..5133001Uncharacterised protein; NCTC10005_075880.0Showinfo_outline
95133087..5134304conjugative transfer protein; NCTC10005_075890.0Showinfo_outline
105134377..5134913Uncharacterised protein; NCTC10005_075900.0Showinfo_outline
115134929..5135351Uncharacterised protein; NCTC10005_075910.0Showinfo_outline
125135294..5135581Uncharacterised protein; NCTC10005_075920.0Showinfo_outline
135135578..5136057appr-1-p processing domain-containing protein; NCTC10005_075930.0Showinfo_outline
145136429..5136878Uncharacterised protein; NCTC10005_075940.0Showinfo_outline
155136847..5137149PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; NCTC10005_07595; phage(gi24373865)4.65e-10Showinfo_outline
165137362..5138015PHAGE_Shigel_Sf6_NC_005344: putative transposase OrfB; NCTC10005_07596; phage(gi41057343)1.93e-158Showinfo_outline
175138046..5138576PHAGE_Edward_eiAU_NC_042029: hypothetical protein; NCTC10005_07597; phage(gi100020)1.88e-58Showinfo_outline
185138587..5138982PROPHAGE_Escher_CFT073: transposase insC; NCTC10005_07598; phage(gi26251004)1.48e-56Showinfo_outline
195138940..5139821PROPHAGE_Shigel_301: insertion element IS2 transposase InsD; NCTC10005_07599; phage(gi24114950)1.11e-131Showinfo_outline
205139894..5140061Uncharacterised protein; NCTC10005_076000.0Showinfo_outline
215140073..5140486Uncharacterised protein; NCTC10005_076010.0Showinfo_outline
22complement(5140475..5141062)Type I restriction-modification system methyltransferase subunit; NCTC10005_076020.0Showinfo_outline
235141364..5141377attL0.0Showinfo_outline
24complement(5141499..5141705)Uncharacterised protein; NCTC10005_076030.0Showinfo_outline
25complement(5141826..5142296)Protein of uncharacterised function (DUF1281); NCTC10005_076040.0Showinfo_outline
26complement(5142390..5143379)PHAGE_Caulob_magneto_NC_019407: putative ArdC-like antirestriction protein; NCTC10005_07605; phage(gi414088708)7.34e-72Showinfo_outline
27complement(5143499..5143666)Uncharacterised protein; NCTC10005_076060.0Showinfo_outline
28complement(5144182..5144550)Uncharacterised protein; NCTC10005_076070.0Showinfo_outline
29complement(5144695..5145000)Uncharacterised protein; NCTC10005_076080.0Showinfo_outline
30complement(5145114..5145476)Uncharacterised protein; NCTC10005_076090.0Showinfo_outline
31complement(5145558..5145947)Uncharacterised protein; NCTC10005_076100.0Showinfo_outline
32complement(5146234..5146677)Uncharacterised protein; NCTC10005_076120.0Showinfo_outline
33complement(5146754..5147638)PROPHAGE_Salmon_LT2: integrase; NCTC10005_07613; phage(gi16766072)2.28e-89Showinfo_outline
345148095..5148108attR0.0Showinfo_outline
355148224..5148235attR0.0Showinfo_outline
365152839..5152855attR0.0Showinfo_outline
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Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)

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Length: 5313651 bps
Phages: 12
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Lysis
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Fiber Protein
Plate Protein
tRNA

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