Submission Results

Sequence Name: Not Available

GenBank Accession Number: UGKP00000000.1

GenInfo (GI) Number: 0000000000

Download Results: UGKP00000000.1.PHASTER.zip

gi|00000000|ref|UGKP00000000.1| Klebsiella pneumoniae strain NCTC13809, whole genome shotgun 5774474, gc%: 57.09%

Download summary as .txt file: summary.txt file_download

Total: 10 prophage regions have been identified, of which 6 regions are intact, 1 regions are incomplete, and 3 regions are questionable.

RegionRegion LengthCompletenessScore# Total ProteinsRegion PositionMost Common PhageGC %Details
125.7Kbquestionable8026464041-489794 info_outlinePHAGE_Salmon_ST64B_NC_004313(3)52.33%Show info_outline
239.6Kbintact150471233520-1273162 info_outlinePHAGE_Salmon_RE_2010_NC_019488(34)52.76%Show info_outline
363.1Kbintact110551373372-1436543 info_outlinePHAGE_Escher_phiV10_NC_007804(37)55.25%Show info_outline
459.7Kbintact140593011561-3071309 info_outlinePHAGE_Salmon_SEN34_NC_028699(24)52.66%Show info_outline
537.5Kbintact150453531008-3568508 info_outlinePHAGE_Salmon_Fels_2_NC_010463(35)51.11%Show info_outline
650.9Kbintact100674004947-4055876 info_outlinePHAGE_Cronob_ENT47670_NC_019927(16)52.58%Show info_outline
721.8Kbincomplete30114263026-4284917 info_outlinePHAGE_Entero_P4_NC_001609(6)55.08%Show info_outline
813Kbquestionable75134745702-4758736 info_outlinePHAGE_Entero_P4_NC_001609(7)49.87%Show info_outline
924.3Kbintact100175489791-5514171 info_outlinePHAGE_Entero_P1_NC_005856(2)54.98%Show info_outline
1030.7Kbquestionable90265652668-5683459 info_outlinePHAGE_Salmon_SJ46_NC_031129(3)54.38%Show info_outline
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Region: The number assigned to the region.
Region Length: The length of the sequence of that region (in bp).
Completeness: A prediction of whether the region contains a intact or incomplete prophage based on the above criteria.
Score: The score of the region based on the above criteria.
# Total Proteins: The number of ORFs present in the region.
Region Position: The start and end positions of the region on the bacterial chromosome.
Most Common Phage: The phage(s) with the highest number of proteins most similar to those in the region.
GC %: The percentage of GC nucleotides of the region.

Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:

  1. If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
Method 2:
  1. If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
Method 3:
  1. If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
  2. If the size of the region is greater than 30 Kb, the score will be increased by 10.
  3. If there are at least 40 proteins in the region, the score will be increased by 10.
  4. If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
Compared the total score of method 2 with the total score of method 3, the bigger one is chosen as the total score of the region.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.

gi|00000000|ref|UGKP00000000.1| Klebsiella pneumoniae strain NCTC13809, whole genome shotgun 5774474, gc%: 57.09%

Download details as .txt file: detail.txt file_download

Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File

Region 1, total 29 CDS

#CDS PositionBLAST HitE-ValueSequence
1464041..464052attL0.0Showinfo_outline
2465275..466501PHAGE_Entero_phi80_NC_021190: integrase; NCTC13809_00448; phage(gi824479609)2.63e-62Showinfo_outline
3466594..467535Uncharacterised protein; NCTC13809_004490.0Showinfo_outline
4467717..468001PHAGE_Entero_P4_NC_001609: transcriptional regulator; NCTC13809_00450; phage(gi9627517)2.17e-07Showinfo_outline
5468012..468791PHAGE_Entero_HK022_NC_002166: Roi; NCTC13809_00451; phage(gi19343392)5.14e-51Showinfo_outline
6468775..469512Uncharacterised protein; NCTC13809_004520.0Showinfo_outline
7469505..469693Uncharacterised protein; NCTC13809_004530.0Showinfo_outline
8469686..470000Uncharacterised protein; NCTC13809_004540.0Showinfo_outline
9469997..470365Uncharacterised protein; NCTC13809_004550.0Showinfo_outline
10470362..470727Uncharacterised protein; NCTC13809_004560.0Showinfo_outline
11470727..472862PHAGE_Thermo_THSA_485A_NC_018264: protein of unknown function DUF927; NCTC13809_00457; phage(gi397912648)2.15e-19Showinfo_outline
12473205..473540Uncharacterised protein; NCTC13809_004580.0Showinfo_outline
13complement(473589..474101)Uncharacterised protein; NCTC13809_004590.0Showinfo_outline
14474365..475531PHAGE_Entero_SfI_NC_027339: phage major capsid protein; NCTC13809_00460; phage(gi849250290)1.82e-60Showinfo_outline
15475583..476143PHAGE_Clostr_phi3626_NC_003524: putative prohead protease; NCTC13809_00461; phage(gi20065968)6.67e-31Showinfo_outline
16476145..477386PHAGE_Shigel_SfIV_NC_022749: portal protein; NCTC13809_00462; phage(gi557307529)3.89e-58Showinfo_outline
17477383..477718PHAGE_Entero_mEpX1_NC_019709: head-tail connector II; NCTC13809_00463; phage(gi428781879)2.40e-24Showinfo_outline
18477715..478014PHAGE_Shigel_SfII_NC_021857: head-tail connector protein; NCTC13809_00464; phage(gi526244642)2.27e-08Showinfo_outline
19478014..478457PHAGE_Burkho_phiE125_NC_003309: putative class I holin; NCTC13809_00465; phage(gi17975232)8.92e-14Showinfo_outline
20478450..478602Uncharacterised protein; NCTC13809_004660.0Showinfo_outline
21478584..478775Uncharacterised protein; NCTC13809_004670.0Showinfo_outline
22478733..479089PHAGE_Psychr_Psymv2_NC_023734: terminase small subunit; NCTC13809_00468; phage(gi593779760)7.40e-18Showinfo_outline
23479073..480734PHAGE_Brucel_BiPBO1_NC_031264: hypothetical protein; NCTC13809_00469; phage(gi100002)9.85e-103Showinfo_outline
24480737..480928Uncharacterised protein; NCTC13809_004700.0Showinfo_outline
25complement(481082..481378)DNA-binding protein Fis; NCTC13809_004710.0Showinfo_outline
26complement(481403..482368)tRNA dihydrouridine synthase B; NCTC13809_004720.0Showinfo_outline
27complement(482726..483607)50S ribosomal protein L11 methyltransferase; NCTC13809_004730.0Showinfo_outline
28complement(483619..485070)PHAGE_Aeromo_44RR2.8t_NC_005135: hypothetical protein; NCTC13809_00474; phage(gi37651715)1.21e-06Showinfo_outline
29489794..489805attR0.0Showinfo_outline

Region 2, total 50 CDS

#CDS PositionBLAST HitE-ValueSequence
11233520..1234404PHAGE_Burkho_phi1026b_NC_005284: gp58; NCTC13809_01234; phage(gi38707948)1.53e-07Showinfo_outline
21234529..1235329plasmid-like protein; NCTC13809_012350.0Showinfo_outline
31235606..1235650attL0.0Showinfo_outline
4complement(1235764..1237314)Uncharacterised protein; NCTC13809_012360.0Showinfo_outline
5complement(1237311..1238336)PHAGE_Salmon_RE_2010_NC_019488: integrase; NCTC13809_01237; phage(gi418489683)0.0Showinfo_outline
6complement(1238339..1238743)PHAGE_Salmon_RE_2010_NC_019488: repressor; NCTC13809_01238; phage(gi418489684)9.11e-29Showinfo_outline
71239127..1239333PHAGE_Salmon_RE_2010_NC_019488: excisionase; NCTC13809_01239; phage(gi418489685)5.04e-20Showinfo_outline
81239366..1239875PHAGE_Salmon_RE_2010_NC_019488: regulatory protein; NCTC13809_01240; phage(gi418489686)2.21e-104Showinfo_outline
91240047..1240385PHAGE_Salmon_RE_2010_NC_019488: hypothetical protein; NCTC13809_01241; phage(gi418489688)1.12e-34Showinfo_outline
101240453..1240686PHAGE_Salmon_RE_2010_NC_019488: hypothetical protein; NCTC13809_01242; phage(gi418489689)2.67e-27Showinfo_outline
111240686..1240913PHAGE_Salmon_RE_2010_NC_019488: zinc-finger containing protein; NCTC13809_01243; phage(gi418489690)2.95e-43Showinfo_outline
121240910..1241761PHAGE_Salmon_RE_2010_NC_019488: DNA adenine methyltransferase; NCTC13809_01244; phage(gi418489691)2.89e-146Showinfo_outline
131241758..1244142PHAGE_Salmon_RE_2010_NC_019488: replication protein; NCTC13809_01245; phage(gi418489692)0.0Showinfo_outline
141244305..1244493PHAGE_Salmon_RE_2010_NC_019488: hypothetical protein; NCTC13809_01246; phage(gi418489693)3.33e-31Showinfo_outline
151244505..1244738PHAGE_Salmon_RE_2010_NC_019488: SOS induction modulator; NCTC13809_01247; phage(gi418489694)2.60e-42Showinfo_outline
16complement(1244834..1245517)Uncharacterised protein; NCTC13809_012480.0Showinfo_outline
17complement(1245504..1246583)Uncharacterised protein; NCTC13809_012490.0Showinfo_outline
18complement(1246583..1247584)Uncharacterised protein; NCTC13809_012500.0Showinfo_outline
19complement(1248432..1249475)PHAGE_Salmon_RE_2010_NC_019488: capsid packaging protein; NCTC13809_01251; phage(gi418489696)0.0Showinfo_outline
20complement(1249475..1251229)PHAGE_Salmon_RE_2010_NC_019488: terminase ATPase subunit; NCTC13809_01252; phage(gi418489697)0.0Showinfo_outline
211251379..1252212PHAGE_Salmon_RE_2010_NC_019488: capsid scaffolding protein; NCTC13809_01253; phage(gi418489698)3.48e-156Showinfo_outline
221252229..1253281PHAGE_Salmon_RE_2010_NC_019488: major capsid protein; NCTC13809_01254; phage(gi418489699)0.0Showinfo_outline
231253285..1253938PHAGE_Salmon_RE_2010_NC_019488: terminase endonuclease subunit; NCTC13809_01255; phage(gi418489700)5.72e-108Showinfo_outline
241254034..1254498PHAGE_Salmon_RE_2010_NC_019488: head completion-stabilization protein; NCTC13809_01256; phage(gi418489701)1.15e-94Showinfo_outline
251254498..1254701PHAGE_Salmon_RE_2010_NC_019488: tail component protein; NCTC13809_01257; phage(gi418489702)6.93e-39Showinfo_outline
261254705..1254920PHAGE_Salmon_RE_2010_NC_019488: lysis protein S; NCTC13809_01258; phage(gi418489703)6.71e-42Showinfo_outline
271254901..1255410PHAGE_Salmon_RE_2010_NC_019488: lysozyme; NCTC13809_01259; phage(gi418489704)1.16e-104Showinfo_outline
281255415..1255798Uncharacterised protein; NCTC13809_012600.0Showinfo_outline
291255795..1256223PHAGE_Salmon_RE_2010_NC_019488: lysozyme subunit B; NCTC13809_01261; phage(gi418489705)2.00e-61Showinfo_outline
301256319..1256741PHAGE_Salmon_RE_2010_NC_019488: tail protein; NCTC13809_01262; phage(gi418489706)3.24e-80Showinfo_outline
311256734..1257180PHAGE_Salmon_RE_2010_NC_019488: tail completion protein; NCTC13809_01263; phage(gi418489707)3.60e-76Showinfo_outline
32complement(1257203..1258069)PHAGE_Salmon_RE_2010_NC_019488: hypothetical protein; NCTC13809_01264; phage(gi418489708)3.21e-46Showinfo_outline
331258164..1258736PHAGE_Salmon_RE_2010_NC_019488: baseplate assembly protein V; NCTC13809_01265; phage(gi418489709)5.07e-97Showinfo_outline
341258733..1259095PHAGE_Salmon_RE_2010_NC_019488: baseplate wedge subunit; NCTC13809_01266; phage(gi418489710)2.57e-62Showinfo_outline
351259082..1259990PHAGE_Salmon_RE_2010_NC_019488: baseplate assembly protein J; NCTC13809_01267; phage(gi418489711)1.80e-146Showinfo_outline
361260031..1260654PHAGE_Salmon_RE_2010_NC_019488: tail protein I; NCTC13809_01268; phage(gi418489712)6.33e-65Showinfo_outline
371260656..1262605PHAGE_Burkho_phiE255_NC_009237: gp26; NCTC13809_01269; phage(gi134288791)2.24e-08Showinfo_outline
381262615..1263733PHAGE_Salico_CGphi29_NC_020844: hypothetical protein; NCTC13809_01270; phage(gi472340194)5.97e-28Showinfo_outline
391263785..1264858PHAGE_Salmon_SEN5_NC_028701: tail fiber protein; NCTC13809_01271; phage(gi966201574)2.33e-44Showinfo_outline
401265007..1266179PHAGE_Salmon_RE_2010_NC_019488: major tail sheath protein; NCTC13809_01272; phage(gi418489720)0.0Showinfo_outline
411266189..1266704PHAGE_Salmon_RE_2010_NC_019488: major tail tube protein; NCTC13809_01273; phage(gi418489721)2.66e-106Showinfo_outline
421266757..1267056PHAGE_Salmon_RE_2010_NC_019488: tail protein E; NCTC13809_01274; phage(gi418489722)3.65e-47Showinfo_outline
431267183..1269813PHAGE_Salmon_RE_2010_NC_019488: tail tape measure protein; NCTC13809_01275; phage(gi418489724)3.11e-86Showinfo_outline
441269810..1270295PHAGE_Salmon_RE_2010_NC_019488: tail protein; NCTC13809_01276; phage(gi418489725)1.11e-95Showinfo_outline
451270292..1271386PHAGE_Salmon_RE_2010_NC_019488: gene D protein; NCTC13809_01277; phage(gi418489726)0.0Showinfo_outline
46complement(1271303..1271659)Uncharacterised protein; NCTC13809_012780.0Showinfo_outline
47complement(1271699..1272076)Uncharacterised protein; NCTC13809_012790.0Showinfo_outline
48complement(1272173..1272535)tRNA0.0Showinfo_outline
491272173..1272217attR0.0Showinfo_outline
50complement(1272680..1273162)PHAGE_Staphy_StauST398_5_NC_023500: SsrA-binding protein; NCTC13809_01281; phage(gi588498309)5.87e-39Showinfo_outline

Region 3, total 57 CDS

#CDS PositionBLAST HitE-ValueSequence
11373372..1373385attL0.0Showinfo_outline
2complement(1386721..1388112)PHAGE_Gordon_Cucurbita_NC_031029: hypothetical protein; NCTC13809_01389; phage(gi100057)3.78e-41Showinfo_outline
31388271..1389737PHAGE_Staphy_42E_NC_007052: ORF012; NCTC13809_01390; phage(gi66395520)3.49e-35Showinfo_outline
41389805..1391382PHAGE_Halovi_HGTV_1_NC_021328: carbamoyl phosphate synthase small subunit; NCTC13809_01391; phage(gi509140368)8.01e-05Showinfo_outline
51391620..1392825PHAGE_Escher_phiV10_NC_007804: putative integrase; NCTC13809_01392; phage(gi89152450)0.0Showinfo_outline
6complement(1392842..1393033)Uncharacterised protein; NCTC13809_013930.0Showinfo_outline
7complement(1393209..1393802)PHAGE_Salmon_SPN1S_NC_016761: putative adenine methylase; NCTC13809_01394; phage(gi374531223)2.63e-139Showinfo_outline
8complement(1393799..1393957)PHAGE_Salmon_SPN1S_NC_016761: hypothetical protein; NCTC13809_01395; phage(gi374531225)8.24e-26Showinfo_outline
9complement(1393950..1394243)PHAGE_Escher_phiV10_NC_007804: putative transcriptional activator; NCTC13809_01396; phage(gi155370095)1.10e-34Showinfo_outline
10complement(1394353..1394601)PHAGE_Escher_phiV10_NC_007804: putative transcriptional regulator; NCTC13809_01397; phage(gi89152453)2.17e-37Showinfo_outline
11complement(1394653..1395675)PHAGE_Salmon_epsilon15_NC_004775: RecT; NCTC13809_01398; phage(gi30387413)0.0Showinfo_outline
12complement(1395685..1396581)PHAGE_Salmon_epsilon15_NC_004775: hypothetical protein; NCTC13809_01399; phage(gi30387414)0.0Showinfo_outline
13complement(1396581..1396880)PHAGE_Escher_phiV10_NC_007804: hypothetical protein; NCTC13809_01400; phage(gi89152455)2.29e-30Showinfo_outline
14complement(1396877..1397026)PHAGE_Escher_phiV10_NC_007804: hypothetical protein; NCTC13809_01401; phage(gi89152456)2.41e-17Showinfo_outline
15complement(1397247..1397828)PHAGE_Escher_phiV10_NC_007804: putative transcriptional repressor; NCTC13809_01402; phage(gi89152457)9.59e-51Showinfo_outline
161397982..1398215PHAGE_Escher_phiV10_NC_007804: hypothetical protein; NCTC13809_01403; phage(gi89152458)1.87e-28Showinfo_outline
171398362..1398571PHAGE_Escher_phiV10_NC_007804: hypothetical protein; NCTC13809_01404; phage(gi89152475)2.24e-31Showinfo_outline
181398571..1399338PHAGE_Escher_phiV10_NC_007804: putative primosomal protein; NCTC13809_01405; phage(gi89152459)3.37e-20Showinfo_outline
191399335..1400120PHAGE_Escher_phiV10_NC_007804: putative replication protein p; NCTC13809_01406; phage(gi155370096)6.36e-166Showinfo_outline
201400240..1400587PHAGE_Escher_phiV10_NC_007804: hypothetical protein; NCTC13809_01407; phage(gi89152461)5.18e-66Showinfo_outline
211400649..1400783Uncharacterised protein; NCTC13809_014080.0Showinfo_outline
221400780..1401190PHAGE_Vibrio_pYD38_A_NC_021534: hypothetical protein; NCTC13809_01409; phage(gi514051016)1.16e-15Showinfo_outline
231401174..1401365PHAGE_Salmon_IME207_NC_031924: hypothetical protein; NCTC13809_01410; phage(gi100023)6.73e-10Showinfo_outline
241401362..1401787Uncharacterised protein; NCTC13809_014110.0Showinfo_outline
251401784..1402527PHAGE_Burkho_BcepNY3_NC_009604: BcepNY3gp60; NCTC13809_01412; phage(gi149882961)8.46e-24Showinfo_outline
261402527..1402697PHAGE_Entero_phiEF24C_NC_009904: hypothetical protein; NCTC13809_01413; phage(gi158079459)4.40e-07Showinfo_outline
271402698..1402910PHAGE_Escher_phiV10_NC_007804: hypothetical protein; NCTC13809_01414; phage(gi89152466)5.21e-15Showinfo_outline
281402907..1403575PHAGE_Entero_cdtI_NC_009514: Valyl-tRNA synthetase; NCTC13809_01415; phage(gi148609417)5.91e-12Showinfo_outline
291403568..1403807PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC13809_01416; phage(gi356870632)2.78e-13Showinfo_outline
301403807..1404145PHAGE_Escher_phiV10_NC_007804: hypothetical protein; NCTC13809_01417; phage(gi89152469)1.07e-48Showinfo_outline
311404220..1404477PHAGE_Salmon_SSU5_NC_018843: hypothetical protein; NCTC13809_01418; phage(gi410491513)6.93e-17Showinfo_outline
321404555..1405139PHAGE_Escher_phiV10_NC_007804: putative terminase small subunit; NCTC13809_01419; phage(gi155370097)1.92e-121Showinfo_outline
331405136..1406611PHAGE_Escher_phiV10_NC_007804: putative terminase large subunit; NCTC13809_01420; phage(gi89152423)0.0Showinfo_outline
34complement(1406678..1406989)PHAGE_Escher_phiV10_NC_007804: hypothetical protein; NCTC13809_01421; phage(gi89152424)3.36e-24Showinfo_outline
351407791..1407997PHAGE_Escher_phiV10_NC_007804: hypothetical protein; NCTC13809_01422; phage(gi89152427)8.70e-30Showinfo_outline
361408012..1409694PHAGE_Escher_phiV10_NC_007804: hypothetical protein; NCTC13809_01423; phage(gi89152428)0.0Showinfo_outline
371409691..1409987PHAGE_Escher_phiV10_NC_007804: hypothetical protein; NCTC13809_01424; phage(gi89152429)8.16e-45Showinfo_outline
381409990..1410670PHAGE_Escher_phiV10_NC_007804: putative protease; NCTC13809_01425; phage(gi89152430)5.36e-118Showinfo_outline
391410685..1411671PHAGE_Escher_phiV10_NC_007804: major capsid protein; NCTC13809_01426; phage(gi89152431)0.0Showinfo_outline
401411725..1412162PHAGE_Escher_phiV10_NC_007804: hypothetical protein; NCTC13809_01427; phage(gi89152432)1.73e-85Showinfo_outline
411412173..1412514PHAGE_Escher_phiV10_NC_007804: hypothetical protein; NCTC13809_01428; phage(gi89152433)2.65e-48Showinfo_outline
421412565..1412888PHAGE_Escher_phiV10_NC_007804: hypothetical protein; NCTC13809_01429; phage(gi89152434)2.90e-62Showinfo_outline
431412888..1413493PHAGE_Escher_phiV10_NC_007804: hypothetical protein; NCTC13809_01430; phage(gi89152435)2.29e-116Showinfo_outline
441413493..1415991PHAGE_Escher_phiV10_NC_007804: hypothetical protein; NCTC13809_01431; phage(gi89152436)0.0Showinfo_outline
451415991..1416455PHAGE_Escher_phiV10_NC_007804: hypothetical protein; NCTC13809_01432; phage(gi89152437)5.29e-68Showinfo_outline
461416455..1416994PHAGE_Escher_phiV10_NC_007804: hypothetical protein; NCTC13809_01433; phage(gi89152438)5.58e-88Showinfo_outline
471417005..1419836PHAGE_Escher_phiV10_NC_007804: hypothetical structural protein; NCTC13809_01434; phage(gi89152439)0.0Showinfo_outline
481419836..1421746PHAGE_Escher_phiV10_NC_007804: hypothetical protein; NCTC13809_01435; phage(gi89152440)9.52e-43Showinfo_outline
491421746..1424511PHAGE_Escher_phiV10_NC_007804: structural protein; NCTC13809_01436; phage(gi89152441)5.39e-95Showinfo_outline
50complement(1426127..1426387)PHAGE_Escher_phiV10_NC_007804: hypothetical protein; NCTC13809_01439; phage(gi89152444)1.25e-35Showinfo_outline
511426580..1428946PHAGE_Escher_phiV10_NC_007804: putative tail fiber; NCTC13809_01440; phage(gi89152445)8.53e-116Showinfo_outline
521428955..1429107Uncharacterised protein; NCTC13809_014410.0Showinfo_outline
531429231..1429635PHAGE_Escher_phiV10_NC_007804: putative integral membrane protein; NCTC13809_01442; phage(gi89152446)5.42e-78Showinfo_outline
541429622..1429927PHAGE_Escher_phiV10_NC_007804: putative holin; NCTC13809_01443; phage(gi89152447)4.11e-52Showinfo_outline
551429917..1430546PHAGE_Escher_phiV10_NC_007804: putative endolysin; NCTC13809_01444; phage(gi89152448)2.67e-114Showinfo_outline
561430543..1431025PHAGE_Escher_phiV10_NC_007804: putative lysis accessory protein; NCTC13809_01445; phage(gi89152449)3.17e-94Showinfo_outline
571436543..1436556attR0.0Showinfo_outline

Region 4, total 63 CDS

#CDS PositionBLAST HitE-ValueSequence
13011561..3011574attL0.0Showinfo_outline
23018923..3019171PHAGE_Entero_cdtI_NC_009514: hypothetical protein; NCTC13809_02959; phage(gi148609412)3.22e-34Showinfo_outline
3complement(3019394..3019678)PHAGE_Entero_HK225_NC_019717: hypothetical protein; NCTC13809_02960; phage(gi428782404)1.99e-19Showinfo_outline
4complement(3019783..3019992)Uncharacterised protein; NCTC13809_029610.0Showinfo_outline
5complement(3019989..3020720)Uncharacterised protein; NCTC13809_029620.0Showinfo_outline
6complement(3020731..3023754)PHAGE_Klebsi_PKP126_NC_031053: hypothetical protein; NCTC13809_02963; phage(gi100059)1.73e-12Showinfo_outline
7complement(3023810..3024007)Uncharacterised protein; NCTC13809_029640.0Showinfo_outline
8complement(3024007..3024873)PHAGE_Salmon_SEN34_NC_028699: tail fiber protein; NCTC13809_02965; phage(gi966201444)1.50e-26Showinfo_outline
9complement(3024873..3025646)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC13809_02966; phage(gi966201443)4.21e-91Showinfo_outline
10complement(3025643..3026839)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC13809_02967; phage(gi966201442)0.0Showinfo_outline
11complement(3026839..3027192)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC13809_02968; phage(gi966201441)6.84e-59Showinfo_outline
12complement(3027194..3027847)PHAGE_Salmon_SEN34_NC_028699: baseplate assembly protein; NCTC13809_02969; phage(gi966201439)2.22e-76Showinfo_outline
13complement(3027901..3028467)Uncharacterised protein; NCTC13809_029700.0Showinfo_outline
143028504..3028689Uncharacterised protein; NCTC13809_029710.0Showinfo_outline
15complement(3028742..3029083)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC13809_02972; phage(gi966201437)1.45e-05Showinfo_outline
16complement(3029083..3030105)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC13809_02973; phage(gi966201436)5.26e-112Showinfo_outline
17complement(3030108..3030410)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC13809_02974; phage(gi966201435)3.66e-34Showinfo_outline
18complement(3030411..3031010)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC13809_02975; phage(gi966201434)1.24e-73Showinfo_outline
19complement(3031010..3033013)PHAGE_Salmon_SEN34_NC_028699: tail tape measure protein; NCTC13809_02976; phage(gi966201433)0.0Showinfo_outline
20complement(3033003..3033155)Uncharacterised protein; NCTC13809_029770.0Showinfo_outline
21complement(3033191..3033616)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC13809_02978; phage(gi966201432)5.13e-47Showinfo_outline
223033943..3034260PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; NCTC13809_02979; phage(gi24373865)7.05e-10Showinfo_outline
233034257..3035135PROPHAGE_Escher_CFT073: transposase insF; NCTC13809_02980; phage(gi26249410)1.67e-68Showinfo_outline
24complement(3035076..3035366)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC13809_02981; phage(gi966201431)2.23e-28Showinfo_outline
25complement(3035377..3036522)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC13809_02982; phage(gi966201430)9.77e-178Showinfo_outline
26complement(3036526..3036966)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC13809_02983; phage(gi966201429)1.29e-41Showinfo_outline
27complement(3037061..3037447)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC13809_02984; phage(gi966201428)4.77e-60Showinfo_outline
28complement(3037447..3037953)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC13809_02985; phage(gi966201427)6.31e-22Showinfo_outline
29complement(3037950..3038369)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC13809_02986; phage(gi966201426)2.17e-54Showinfo_outline
30complement(3038338..3038619)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC13809_02987; phage(gi966201425)2.38e-09Showinfo_outline
31complement(3038659..3039600)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC13809_02988; phage(gi966201424)1.98e-167Showinfo_outline
32complement(3039612..3040106)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC13809_02989; phage(gi966201423)2.68e-55Showinfo_outline
33complement(3040110..3041312)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC13809_02990; phage(gi966201422)2.18e-137Showinfo_outline
34complement(3041968..3043419)PHAGE_Salmon_SEN34_NC_028699: putative portal protein; NCTC13809_02991; phage(gi966201420)0.0Showinfo_outline
353043534..3043545attL0.0Showinfo_outline
36complement(3043657..3045057)PHAGE_Edward_GF_2_NC_026611: putative terminase large subunit; NCTC13809_02992; phage(gi764162249)0.0Showinfo_outline
37complement(3045008..3045760)PHAGE_Edward_GF_2_NC_026611: putative terminase small subunit; NCTC13809_02993; phage(gi764162248)5.19e-17Showinfo_outline
38complement(3045862..3046218)negative regulator GrlR; NCTC13809_029940.0Showinfo_outline
39complement(3046275..3046598)PHAGE_Shigel_SfII_NC_021857: o-spanin; NCTC13809_02995; phage(gi526244688)1.16e-47Showinfo_outline
40complement(3046803..3047333)PHAGE_Entero_mEp460_NC_019716: endolysin; NCTC13809_02996; phage(gi428782372)3.39e-101Showinfo_outline
41complement(3047336..3047584)PHAGE_Entero_phi80_NC_021190: holin; NCTC13809_02997; phage(gi824479635)7.59e-09Showinfo_outline
42complement(3047990..3048772)PHAGE_Cronob_ENT39118_NC_019934: antitermination protein; NCTC13809_02998; phage(gi431811056)1.03e-148Showinfo_outline
43complement(3048769..3049245)PHAGE_Salmon_Fels_1_NC_010391: hypothetical protein; NCTC13809_02999; phage(gi169257177)8.69e-18Showinfo_outline
44complement(3049242..3050204)PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage DNA primase; NCTC13809_03000; phage(gi169257176)0.0Showinfo_outline
45complement(3050206..3051864)PHAGE_Salmon_Fels_1_NC_010391: putative helicase; NCTC13809_03001; phage(gi169257175)0.0Showinfo_outline
46complement(3052441..3052662)PHAGE_Salmon_SEN22_NC_028696: putative repressor protein; NCTC13809_03002; phage(gi966201352)2.25e-14Showinfo_outline
473052760..3053428PHAGE_Entero_IME10_NC_019501: repressor protein; NCTC13809_03003; phage(gi422934295)1.43e-92Showinfo_outline
483053906..3054094PHAGE_Salmon_Fels_1_NC_010391: hypothetical protein; NCTC13809_03004; phage(gi169257169)1.16e-11Showinfo_outline
493054622..3054876PHAGE_Salmon_Fels_1_NC_010391: hypothetical protein; NCTC13809_03005; phage(gi169257165)1.90e-36Showinfo_outline
503054848..3055066Uncharacterised protein; NCTC13809_030060.0Showinfo_outline
513055063..3055488PHAGE_Salmon_Fels_1_NC_010391: hypothetical protein; NCTC13809_03007; phage(gi169257164)2.40e-52Showinfo_outline
523055485..3055679Uncharacterised protein; NCTC13809_030080.0Showinfo_outline
533055676..3056503PHAGE_Entero_phiP27_NC_003356: putative serine protease; NCTC13809_03009; phage(gi18249869)1.59e-167Showinfo_outline
543056548..3057126PHAGE_Entero_phiP27_NC_003356: hypothetical protein; NCTC13809_03010; phage(gi18249870)1.81e-55Showinfo_outline
553057135..3057842PHAGE_Entero_phiP27_NC_003356: hypothetical protein; NCTC13809_03011; phage(gi18249878)4.64e-99Showinfo_outline
563057832..3058056PHAGE_Salmon_Fels_1_NC_010391: hypothetical protein; NCTC13809_03012; phage(gi169257161)1.09e-24Showinfo_outline
573058053..3058265Uncharacterised protein; NCTC13809_030130.0Showinfo_outline
583058262..3058741Uncharacterised protein; NCTC13809_030140.0Showinfo_outline
593058814..3058960PHAGE_Salmon_Fels_1_NC_010391: hypothetical protein; NCTC13809_03015; phage(gi169257158)2.01e-22Showinfo_outline
603058971..3059162PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC13809_03016; phage(gi966201450)1.21e-29Showinfo_outline
61complement(3059143..3060324)PHAGE_Salmon_SEN34_NC_028699: integrase; NCTC13809_03017; phage(gi966201449)0.0Showinfo_outline
623064985..3064996attR0.0Showinfo_outline
633071309..3071322attR0.0Showinfo_outline

Region 5, total 47 CDS

#CDS PositionBLAST HitE-ValueSequence
13531008..3531026attL0.0Showinfo_outline
2complement(3531098..3531316)PHAGE_Salmon_Fels_2_NC_010463: P2 gpOgr-like protein (acttivation of late gene expression); NCTC13809_03464; phage(gi169936018)1.05e-27Showinfo_outline
3complement(3531408..3532508)PHAGE_Salmon_Fels_2_NC_010463: tail protein; NCTC13809_03465; phage(gi169936019)0.0Showinfo_outline
4complement(3532505..3532990)PHAGE_Salmon_Fels_2_NC_010463: P2 gpU-like tail protein; NCTC13809_03466; phage(gi169936020)1.19e-91Showinfo_outline
5complement(3532987..3535614)PHAGE_Shigel_SfII_NC_021857: tail protein; NCTC13809_03467; phage(gi526244650)7.23e-108Showinfo_outline
6complement(3535741..3536040)PHAGE_Salmon_Fels_2_NC_010463: P2 gpE-like tail protein; NCTC13809_03468; phage(gi169936023)8.24e-48Showinfo_outline
7complement(3536093..3536608)PHAGE_Salmon_Fels_2_NC_010463: major tail tube protein; NCTC13809_03469; phage(gi169936024)6.65e-107Showinfo_outline
8complement(3536618..3537790)PHAGE_Salmon_Fels_2_NC_010463: major tail sheath protein; NCTC13809_03470; phage(gi169936025)0.0Showinfo_outline
9complement(3537929..3539005)PHAGE_Erwini_phiEt88_NC_015295: putative tail fiber protein; NCTC13809_03471; phage(gi327198586)4.12e-33Showinfo_outline
10complement(3539035..3539238)Uncharacterised protein; NCTC13809_034720.0Showinfo_outline
11complement(3539235..3539966)Uncharacterised protein; NCTC13809_034730.0Showinfo_outline
12complement(3539970..3542921)PHAGE_Burkho_BcepMu_NC_005882: gp52; NCTC13809_03474; phage(gi48696962)6.78e-08Showinfo_outline
13complement(3542923..3543522)PHAGE_Salmon_Fels_2_NC_010463: P2 gpI-like baseplate assembly protein; NCTC13809_03475; phage(gi169936031)9.20e-75Showinfo_outline
14complement(3543515..3544423)PHAGE_Salmon_Fels_2_NC_010463: baseplate assembly protein; NCTC13809_03476; phage(gi169936032)3.66e-149Showinfo_outline
15complement(3544410..3544772)PHAGE_Salmon_Fels_2_NC_010463: baseplate wedge subunit; NCTC13809_03477; phage(gi169936033)1.07e-63Showinfo_outline
16complement(3544769..3545341)PHAGE_Salmon_Fels_2_NC_010463: P2 gpV-like protein; NCTC13809_03478; phage(gi169936034)3.43e-98Showinfo_outline
173545436..3546128Uncharacterised protein; NCTC13809_034790.0Showinfo_outline
18complement(3546125..3546571)PHAGE_Salmon_Fels_2_NC_010463: P2 gpS-like tail completion protein; NCTC13809_03480; phage(gi169936035)1.64e-73Showinfo_outline
19complement(3546564..3546995)PHAGE_Salmon_Fels_2_NC_010463: P2 gpR-like tail completion protein; NCTC13809_03481; phage(gi169936036)1.29e-84Showinfo_outline
20complement(3546958..3547248)PHAGE_Salmon_Fels_2_NC_010463: P2 LysC-like protein; NCTC13809_03482; phage(gi169936037)1.63e-40Showinfo_outline
21complement(3547516..3547899)Uncharacterised protein; NCTC13809_034830.0Showinfo_outline
22complement(3547904..3548413)PHAGE_Salmon_Fels_2_NC_010463: endolysin; NCTC13809_03484; phage(gi169936041)8.88e-96Showinfo_outline
23complement(3548394..3548609)PHAGE_Salmon_Fels_2_NC_010463: lysis protein; NCTC13809_03485; phage(gi169936042)2.24e-42Showinfo_outline
24complement(3548613..3548816)PHAGE_Salmon_Fels_2_NC_010463: P2 gpX-like tail protein; NCTC13809_03486; phage(gi169936043)3.00e-37Showinfo_outline
25complement(3548816..3549280)PHAGE_Salmon_Fels_2_NC_010463: P2 gpL-like protein; NCTC13809_03487; phage(gi169936044)3.57e-102Showinfo_outline
26complement(3549376..3550026)PHAGE_Salmon_Fels_2_NC_010463: terminase endonuclease subunit; NCTC13809_03488; phage(gi169936045)5.76e-127Showinfo_outline
27complement(3550030..3551088)PHAGE_Salmon_Fels_2_NC_010463: capsid protein; NCTC13809_03489; phage(gi169936046)0.0Showinfo_outline
28complement(3551105..3551938)PHAGE_Salmon_Fels_2_NC_010463: capsid-scaffolding protein; NCTC13809_03490; phage(gi169936047)1.08e-173Showinfo_outline
293552081..3553847PHAGE_Salmon_Fels_2_NC_010463: terminase ATPase subunit; NCTC13809_03491; phage(gi169936048)0.0Showinfo_outline
303553847..3554872PHAGE_Salmon_Fels_2_NC_010463: portal vertex protein; NCTC13809_03492; phage(gi169936049)0.0Showinfo_outline
31complement(3554934..3556676)PHAGE_Salmon_Fels_2_NC_010463: hypothetical protein; NCTC13809_03493; phage(gi169936050)2.17e-06Showinfo_outline
32complement(3556952..3557629)PHAGE_Salmon_Fels_2_NC_010463: hypothetical protein; NCTC13809_03494; phage(gi169936051)1.31e-161Showinfo_outline
33complement(3557744..3557977)PHAGE_Salmon_Fels_2_NC_010463: TumB protein; NCTC13809_03495; phage(gi169936052)7.13e-50Showinfo_outline
34complement(3557988..3558176)PHAGE_Salmon_Fels_2_NC_010463: hypothetical protein; NCTC13809_03496; phage(gi169936053)1.39e-38Showinfo_outline
35complement(3558330..3560744)PHAGE_Salmon_Fels_2_NC_010463: P2 gpA-like protein; NCTC13809_03497; phage(gi169936054)0.0Showinfo_outline
36complement(3560741..3561598)PHAGE_Salmon_Fels_2_NC_010463: DNA adenine methylase-like protein; NCTC13809_03498; phage(gi169936055)1.24e-147Showinfo_outline
37complement(3561595..3561822)PHAGE_Salmon_Fels_2_NC_010463: DksA-like zinc finger domain containing protein; NCTC13809_03499; phage(gi169936056)7.73e-45Showinfo_outline
38complement(3561822..3562055)PHAGE_Salmon_Fels_2_NC_010463: hypothetical protein; NCTC13809_03500; phage(gi169936057)1.23e-34Showinfo_outline
39complement(3562123..3562464)PHAGE_Salmon_Fels_2_NC_010463: hypothetical protein; NCTC13809_03501; phage(gi169936058)8.14e-68Showinfo_outline
40complement(3562428..3562628)PHAGE_Salmon_Fels_2_NC_010463: hypothetical protein; NCTC13809_03502; phage(gi169936060)1.86e-17Showinfo_outline
41complement(3562636..3563145)PHAGE_Salmon_Fels_2_NC_010463: bacteriophage regulatory protein CII; NCTC13809_03503; phage(gi169936061)5.62e-112Showinfo_outline
42complement(3563178..3563399)PHAGE_Haemop_HP2_NC_003315: orf2(S)cox; NCTC13809_03504; phage(gi17981819)1.42e-08Showinfo_outline
433563488..3564423PHAGE_Salmon_Fels_2_NC_010463: P2 CI-like protein; NCTC13809_03505; phage(gi169936063)8.24e-40Showinfo_outline
443564435..3565379Uncharacterised protein; NCTC13809_035060.0Showinfo_outline
45complement(3565478..3566965)PHAGE_Pseudo_phi3_NC_030940: hypothetical protein; NCTC13809_03507; phage(gi100001)2.31e-36Showinfo_outline
463567381..3568433PHAGE_Salmon_Fels_2_NC_010463: integrase; NCTC13809_03509; phage(gi169936064)2.04e-128Showinfo_outline
473568508..3568526attR0.0Showinfo_outline

Region 6, total 70 CDS

#CDS PositionBLAST HitE-ValueSequence
14004947..4004958attL0.0Showinfo_outline
2complement(4007275..4007514)PHAGE_Entero_HK225_NC_019717: hypothetical protein; NCTC13809_03917; phage(gi428782404)1.62e-22Showinfo_outline
3complement(4007592..4009079)PHAGE_Pseudo_phi3_NC_030940: hypothetical protein; NCTC13809_03918; phage(gi100001)4.32e-36Showinfo_outline
4complement(4009529..4009738)Uncharacterised protein; NCTC13809_039200.0Showinfo_outline
5complement(4009735..4010466)Uncharacterised protein; NCTC13809_039210.0Showinfo_outline
6complement(4010470..4013457)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC13809_03922; phage(gi431810496)5.97e-05Showinfo_outline
7complement(4013544..4016021)PHAGE_Cronob_ENT47670_NC_019927: putative tail protein; NCTC13809_03923; phage(gi431810495)0.0Showinfo_outline
8complement(4016008..4016403)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC13809_03924; phage(gi431810526)1.02e-44Showinfo_outline
9complement(4016400..4016870)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC13809_03925; phage(gi431810518)4.34e-35Showinfo_outline
10complement(4016870..4017346)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC13809_03926; phage(gi431810519)1.25e-50Showinfo_outline
11complement(4017389..4020835)PHAGE_Vibrio_pYD38_A_NC_021534: tail length tape measure protein; NCTC13809_03927; phage(gi514051037)0.0Showinfo_outline
12complement(4020928..4021431)PHAGE_Brucel_BiPBO1_NC_031264: hypothetical protein; NCTC13809_03928; phage(gi100067)1.10e-06Showinfo_outline
13complement(4021559..4022344)PHAGE_Escher_PA2_NC_028449: antirepressor protein; NCTC13809_03929; phage(gi953358051)1.05e-39Showinfo_outline
14complement(4022410..4023123)PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; NCTC13809_03930; phage(gi423262398)4.10e-66Showinfo_outline
15complement(4023113..4023283)PHAGE_Salmon_vB_SosS_Oslo_NC_018279: Arc-like DNA binding domain protein; NCTC13809_03931; phage(gi399528776)6.62e-26Showinfo_outline
164023383..4023742PHAGE_Salmon_SPN3UB_NC_019545: Arc-like DNA binding domain protein; NCTC13809_03932; phage(gi423262396)1.37e-18Showinfo_outline
17complement(4023759..4024526)Uncharacterised protein; NCTC13809_039330.0Showinfo_outline
18complement(4024523..4024777)PHAGE_Entero_mEp235_NC_019708: hypothetical protein; NCTC13809_03934; phage(gi428781870)4.15e-29Showinfo_outline
19complement(4024780..4025535)PHAGE_Entero_mEpX1_NC_019709: hypothetical protein; NCTC13809_03935; phage(gi428781933)1.57e-75Showinfo_outline
20complement(4025711..4026388)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC13809_03936; phage(gi431810508)3.78e-96Showinfo_outline
21complement(4026441..4027193)PHAGE_Cronob_ENT47670_NC_019927: major tail subunit; NCTC13809_03937; phage(gi431810520)3.45e-41Showinfo_outline
22complement(4027262..4027654)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC13809_03938; phage(gi431810530)1.90e-44Showinfo_outline
23complement(4027651..4028076)PHAGE_Vibrio_pYD38_A_NC_021534: hypothetical protein; NCTC13809_03939; phage(gi514050969)4.88e-39Showinfo_outline
24complement(4028079..4028441)PHAGE_Mannhe_vB_MhS_535AP2_NC_028853: hypothetical protein; NCTC13809_03940; phage(gi971749596)4.02e-26Showinfo_outline
25complement(4028441..4028614)PHAGE_Salmon_vB_SosS_Oslo_NC_018279: hypothetical protein; NCTC13809_03941; phage(gi399528768)3.79e-19Showinfo_outline
26complement(4028614..4028994)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC13809_03942; phage(gi431810531)2.95e-39Showinfo_outline
27complement(4028997..4029236)Uncharacterised protein; NCTC13809_039430.0Showinfo_outline
28complement(4029247..4030341)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC13809_03944; phage(gi431810503)7.34e-161Showinfo_outline
29complement(4030353..4030781)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC13809_03945; phage(gi431810525)1.15e-56Showinfo_outline
30complement(4030785..4032170)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC13809_03946; phage(gi431810499)0.0Showinfo_outline
31complement(4032243..4032719)Uncharacterised protein; NCTC13809_039470.0Showinfo_outline
32complement(4032761..4033765)PHAGE_Cronob_ENT47670_NC_019927: phage head morphogenesis; NCTC13809_03948; phage(gi431810507)1.44e-150Showinfo_outline
33complement(4033740..4035161)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC13809_03949; phage(gi431810500)0.0Showinfo_outline
34complement(4035174..4036646)PHAGE_Cronob_phiES15_NC_018454: terminase large subunit; NCTC13809_03950; phage(gi401817592)0.0Showinfo_outline
35complement(4036646..4037248)PHAGE_Escher_HK639_NC_016158: terminase small subunit; NCTC13809_03951; phage(gi356870601)3.46e-104Showinfo_outline
364037465..4037626Uncharacterised protein; NCTC13809_039520.0Showinfo_outline
374037619..4037948Uncharacterised protein; NCTC13809_039530.0Showinfo_outline
38complement(4038054..4038518)PHAGE_Salmon_HK620_NC_002730: endopeptidase; NCTC13809_03954; phage(gi13559860)1.45e-77Showinfo_outline
39complement(4038515..4039045)PHAGE_Escher_TL_2011c_NC_019442: lysozyme; NCTC13809_03955; phage(gi418487070)1.65e-100Showinfo_outline
40complement(4039048..4039296)PHAGE_Entero_phi80_NC_021190: holin; NCTC13809_03956; phage(gi824479635)1.05e-08Showinfo_outline
41complement(4039567..4039641)tRNA0.0Showinfo_outline
42complement(4040206..4040895)PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage antiterminator protein Q; NCTC13809_03960; phage(gi169257244)2.45e-93Showinfo_outline
43complement(4040892..4041422)PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; NCTC13809_03961; phage(gi100047)2.34e-37Showinfo_outline
44complement(4041415..4041552)PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; NCTC13809_03962; phage(gi169257245)5.45e-07Showinfo_outline
45complement(4041549..4042184)PHAGE_Entero_phi80_NC_021190: DNA junction-specific endonuclease Rap; NCTC13809_03963; phage(gi824479632)3.57e-113Showinfo_outline
46complement(4042177..4042347)PHAGE_Escher_HK639_NC_016158: NinE; NCTC13809_03964; phage(gi356870663)4.22e-21Showinfo_outline
47complement(4042347..4042802)PHAGE_Entero_HK225_NC_019717: NinB protein; NCTC13809_03965; phage(gi428782436)6.77e-73Showinfo_outline
48complement(4043303..4043950)PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; NCTC13809_03966; phage(gi100049)1.75e-15Showinfo_outline
49complement(4044123..4044965)PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; NCTC13809_03967; phage(gi100057)2.54e-33Showinfo_outline
50complement(4044962..4045075)PHAGE_Salmon_epsilon34_NC_011976: hypothetical protein; NCTC13809_03968; phage(gi221328647)2.98e-12Showinfo_outline
51complement(4045072..4045578)PHAGE_Vibrio_pYD38_A_NC_021534: hypothetical protein; NCTC13809_03969; phage(gi514051016)1.35e-16Showinfo_outline
52complement(4045575..4045868)PHAGE_Entero_933W_NC_000924: Ren protein; NCTC13809_03970; phage(gi9632496)1.03e-37Showinfo_outline
53complement(4045868..4047298)PHAGE_Entero_HK022_NC_002166: gene P protein; NCTC13809_03971; phage(gi9634151)0.0Showinfo_outline
54complement(4047288..4048187)PHAGE_Cronob_ENT47670_NC_019927: replication protein; NCTC13809_03972; phage(gi431810506)1.04e-117Showinfo_outline
55complement(4048180..4048326)Uncharacterised protein; NCTC13809_039730.0Showinfo_outline
56complement(4048412..4048633)PHAGE_Entero_mEp213_NC_019720: CII protein; NCTC13809_03974; phage(gi428782643)8.49e-10Showinfo_outline
57complement(4048674..4048907)PHAGE_Escher_HK639_NC_016158: cro; NCTC13809_03975; phage(gi356870651)5.15e-19Showinfo_outline
584049035..4049724PHAGE_Escher_HK639_NC_016158: cI; NCTC13809_03976; phage(gi356870650)3.30e-81Showinfo_outline
594050287..4050397Uncharacterised protein; NCTC13809_039770.0Showinfo_outline
604050390..4050584Uncharacterised protein; NCTC13809_039780.0Showinfo_outline
614050673..4050957PHAGE_Entero_phi80_NC_021190: host RecBCD/SbcCD enzymes inhibitor; NCTC13809_03979; phage(gi824479615)1.17e-19Showinfo_outline
624050973..4051818PHAGE_Ralsto_RSK1_NC_022915: putative phage recombination protein; NCTC13809_03980; phage(gi560186064)9.78e-81Showinfo_outline
634051815..4052495PHAGE_Cronob_ENT47670_NC_019927: exonuclease; NCTC13809_03981; phage(gi431810511)5.58e-149Showinfo_outline
644052492..4052650PHAGE_Entero_933W_NC_000924: hypothetical protein; NCTC13809_03982; phage(gi9632478)3.57e-16Showinfo_outline
654052647..4053303PHAGE_Escher_HK639_NC_016158: adenine specific methyltransferase; NCTC13809_03983; phage(gi356870635)2.11e-144Showinfo_outline
664053300..4054067PHAGE_Escher_vB_EcoM_ECO1230_10_NC_027995: conserved phage protein; NCTC13809_03984; phage(gi937533322)3.06e-82Showinfo_outline
674054064..4054282PHAGE_Entero_933W_NC_000924: hypothetical protein; NCTC13809_03985; phage(gi9632476)7.72e-16Showinfo_outline
684054284..4054499PHAGE_Stx2_vB_EcoP_24B_NC_027984: putative C4 zinc finger protein; NCTC13809_03986; phage(gi937456240)7.19e-17Showinfo_outline
694054492..4054503attR0.0Showinfo_outline
704054713..4055876PHAGE_Escher_HK639_NC_016158: integrase; NCTC13809_03987; phage(gi356870629)0.0Showinfo_outline

Region 7, total 13 CDS

#CDS PositionBLAST HitE-ValueSequence
14263026..4263039attL0.0Showinfo_outline
24271094..4272284PROPHAGE_Escher_Sakai: putative integrase; NCTC13809_04198; phage(gi15833788)0.0Showinfo_outline
34272272..4273222PHAGE_Lactob_LF1_NC_019486: chromosome partitioning ATPase; NCTC13809_04199; phage(gi418489414)1.87e-17Showinfo_outline
44273222..4273647Uncharacterised protein; NCTC13809_042000.0Showinfo_outline
5complement(4274216..4274782)PHAGE_Entero_P4_NC_001609: amber mutation-suppressing protein; NCTC13809_04201; phage(gi9627520)1.18e-75Showinfo_outline
6complement(4274800..4275045)PHAGE_Erwini_ENT90_NC_019932: transcriptional regulator; NCTC13809_04202; phage(gi431810990)6.18e-18Showinfo_outline
7complement(4275042..4275779)PHAGE_Entero_P4_NC_001609: head size determination protein sid; NCTC13809_04203; phage(gi9627518)5.82e-99Showinfo_outline
84276321..4276587PHAGE_Entero_P4_NC_001609: transcriptional regulator; NCTC13809_04204; phage(gi9627517)3.30e-42Showinfo_outline
94276947..4277141PHAGE_Entero_P4_NC_001609: putative CI repressor; NCTC13809_04207; phage(gi9627516)3.25e-31Showinfo_outline
104277138..4277365Uncharacterised protein; NCTC13809_042080.0Showinfo_outline
114277362..4277682PHAGE_Entero_P4_NC_001609: hypothetical protein; NCTC13809_04209; phage(gi9627513)2.01e-65Showinfo_outline
124277694..4280027PHAGE_Entero_P4_NC_001609: DNA primase; NCTC13809_04210; phage(gi9627512)0.0Showinfo_outline
134284917..4284930attR0.0Showinfo_outline

Region 8, total 15 CDS

#CDS PositionBLAST HitE-ValueSequence
14745702..4745714attL0.0Showinfo_outline
2complement(4746417..4746896)PROPHAGE_Xantho_33913: ISxcC1 transposase; NCTC13809_04646; phage(gi21230085)5.42e-65Showinfo_outline
3complement(4748274..4750607)PHAGE_Entero_P4_NC_001609: DNA primase; NCTC13809_04648; phage(gi9627512)0.0Showinfo_outline
4complement(4750622..4750942)PHAGE_Entero_P4_NC_001609: hypothetical protein; NCTC13809_04649; phage(gi9627513)2.19e-65Showinfo_outline
5complement(4750939..4751166)Uncharacterised protein; NCTC13809_046500.0Showinfo_outline
6complement(4751163..4751357)PHAGE_Entero_P4_NC_001609: putative CI repressor; NCTC13809_04651; phage(gi9627516)1.30e-30Showinfo_outline
7complement(4751708..4751974)PHAGE_Entero_P4_NC_001609: transcriptional regulator; NCTC13809_04654; phage(gi9627517)3.20e-42Showinfo_outline
84752535..4753272PHAGE_Entero_P4_NC_001609: head size determination protein sid; NCTC13809_04655; phage(gi9627518)1.59e-95Showinfo_outline
94753269..4753514PHAGE_Entero_186_NC_001317: B protein; NCTC13809_04656; phage(gi9634083)8.88e-18Showinfo_outline
104753532..4754098PHAGE_Entero_P4_NC_001609: amber mutation-suppressing protein; NCTC13809_04657; phage(gi9627520)2.48e-75Showinfo_outline
114754839..4755918Uncharacterised protein; NCTC13809_046580.0Showinfo_outline
124755919..4756455Uncharacterised protein; NCTC13809_046590.0Showinfo_outline
134756463..4757416Uncharacterised protein; NCTC13809_046600.0Showinfo_outline
144757420..4757432attR0.0Showinfo_outline
15complement(4757474..4758736)PHAGE_Entero_P4_NC_001609: integrase; NCTC13809_04661; phage(gi9627511)0.0Showinfo_outline

Region 9, total 19 CDS

#CDS PositionBLAST HitE-ValueSequence
15489791..5489802attL0.0Showinfo_outline
25495837..5497570PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; NCTC13809_05368; phage(gi371496158)1.53e-19Showinfo_outline
3complement(5499391..5499738)PHAGE_Stx2_c_1717_NC_011357: transposase; NCTC13809_05369; phage(gi209447153)2.73e-67Showinfo_outline
4complement(5499806..5500426)PHAGE_Stx2_c_1717_NC_011357: transposase; NCTC13809_05370; phage(gi209447153)3.39e-130Showinfo_outline
5complement(5500369..5501343)PHAGE_Stx2_c_1717_NC_011357: transposase; NCTC13809_05371; phage(gi209447153)0.0Showinfo_outline
6complement(5501393..5501740)PHAGE_Stx2_c_1717_NC_011357: transposase; NCTC13809_05372; phage(gi209447152)8.81e-76Showinfo_outline
7complement(5502671..5503306)His-Xaa-Ser repeat protein HxsA; NCTC13809_053730.0Showinfo_outline
8complement(5503303..5504415)PHAGE_Campyl_CP21_NC_019507: radical SAM domain-containing protein; NCTC13809_05374; phage(gi422935302)3.17e-07Showinfo_outline
9complement(5504408..5505796)PHAGE_Erwini_vB_EamM_Asesino_NC_031107: chaperone for long tail fiber formation; NCTC13809_05375; phage(gi100168)9.30e-05Showinfo_outline
10complement(5506028..5506405)PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; NCTC13809_05376; phage(gi557307573)3.45e-87Showinfo_outline
11complement(5506450..5506725)PHAGE_Entero_P1_NC_005856: InsA; NCTC13809_05377; phage(gi46401643)7.08e-63Showinfo_outline
125507004..5507663PHAGE_Stx2_vB_EcoP_24B_NC_027984: Cat; NCTC13809_05378; phage(gi937456276)3.11e-167Showinfo_outline
13complement(5507864..5508241)YbjA protein; NCTC13809_053790.0Showinfo_outline
14complement(5508308..5511274)PROPHAGE_Xantho_33913: Tn5041 transposase; NCTC13809_05380; phage(gi21231545)8.67e-46Showinfo_outline
15complement(5511277..5511837)PHAGE_Salmon_SJ46_NC_031129: prohead core protein protease; NCTC13809_05381; phage(gi100061)7.62e-69Showinfo_outline
16complement(5511963..5512313)diguanylate cyclase/cyclic diguanylate phosphodiesterase; NCTC13809_053820.0Showinfo_outline
175512218..5512229attR0.0Showinfo_outline
18complement(5512516..5513529)PHAGE_Mycoba_Butters_NC_021061: integrase; NCTC13809_05383; phage(gi479336499)2.26e-12Showinfo_outline
195513674..5514171PHAGE_Bacill_Bp8p_C_NC_029121: putative dihydrofolate reductase; NCTC13809_05384; phage(gi985761486)1.16e-33Showinfo_outline

Region 10, total 30 CDS

#CDS PositionBLAST HitE-ValueSequence
15652668..5652679attL0.0Showinfo_outline
25661198..5661211attL0.0Showinfo_outline
3complement(5662428..5663210)PHAGE_Mycoba_Panchino_NC_031281: hypothetical protein; NCTC13809_05546; phage(gi100032)3.15e-06Showinfo_outline
4complement(5663210..5663542)Uncharacterised protein; NCTC13809_055470.0Showinfo_outline
5complement(5663549..5663905)Uncharacterised protein; NCTC13809_055480.0Showinfo_outline
6complement(5663973..5664302)Uncharacterised protein; NCTC13809_055490.0Showinfo_outline
7complement(5664330..5664638)Uncharacterised protein; NCTC13809_055500.0Showinfo_outline
8complement(5664684..5664935)Uncharacterised protein; NCTC13809_055510.0Showinfo_outline
95665543..5665773vagC protein; NCTC13809_055520.0Showinfo_outline
105665785..5666186putative DNA binding protein; NCTC13809_055530.0Showinfo_outline
115666245..5666258attR0.0Showinfo_outline
125666260..5666970recombination protein F; NCTC13809_055540.0Showinfo_outline
135667004..5667279PHAGE_Entero_P1_NC_005856: InsA; NCTC13809_05555; phage(gi46401643)2.42e-57Showinfo_outline
145667324..5667701PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; NCTC13809_05556; phage(gi557307573)1.34e-82Showinfo_outline
155667863..5668285mercuric transport protein; NCTC13809_055570.0Showinfo_outline
165668337..5670031putative mercuric reductase; NCTC13809_055580.0Showinfo_outline
175670049..5670411mercuric resistance operon coregulator; NCTC13809_055590.0Showinfo_outline
185670408..5670644mercuric transport protein; NCTC13809_055600.0Showinfo_outline
195670641..5671348diguanylate cyclase/cyclic diguanylate phosphodiesterase; NCTC13809_055610.0Showinfo_outline
205671423..5672691PROPHAGE_Brucel_1330: transposase, putative; NCTC13809_05562; phage(gi23501616)1.01e-33Showinfo_outline
215672711..5672722attR0.0Showinfo_outline
225672738..5673148PROPHAGE_Brucel_1330: transposase, putative; NCTC13809_05563; phage(gi23502708)7.58e-38Showinfo_outline
23complement(5673259..5674119)PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; NCTC13809_05564; phage(gi100066)5.20e-57Showinfo_outline
24complement(5674302..5674553)PHAGE_Salmon_SJ46_NC_031129: prohead core protein protease; NCTC13809_05565; phage(gi100061)4.13e-06Showinfo_outline
25complement(5675308..5675643)Beta-lactamase OXA-1 precursor; NCTC13809_055660.0Showinfo_outline
26complement(5675863..5676567)PROPHAGE_Brucel_1330: transposase, putative; NCTC13809_05567; phage(gi23502708)1.98e-53Showinfo_outline
275676640..5679537PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; NCTC13809_05568; phage(gi100060)0.0Showinfo_outline
285679626..5680246PHAGE_Clostr_phiCD27_NC_011398: putative phage site-specific recombinase; NCTC13809_05569; phage(gi209901279)3.94e-07Showinfo_outline
29complement(5681412..5681771)Uncharacterized protein conserved in bacteria; NCTC13809_055700.0Showinfo_outline
305682275..5683459PROPHAGE_Shewan_MR-1: transposase, putative; NCTC13809_05571; phage(gi24373689)2.31e-142Showinfo_outline
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Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)

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Length: 5774474 bps
Phages: 10
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Lysis
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Fiber Protein
Plate Protein
tRNA

Download data as .txt file: png_input file_download