Submission Results

Sequence Name: Not Available

GenBank Accession Number: UGKV00000000.1

GenInfo (GI) Number: 0000000000

Download Results: UGKV00000000.1.PHASTER.zip

gi|00000000|ref|UGKV00000000.1| Klebsiella pneumoniae strain NCTC13439, whole genome shotgun 5735418, gc%: 56.95%

Download summary as .txt file: summary.txt file_download

Total: 6 prophage regions have been identified, of which 3 regions are intact, 2 regions are incomplete, and 1 regions are questionable.

RegionRegion LengthCompletenessScore# Total ProteinsRegion PositionMost Common PhageGC %Details
113.1Kbincomplete3015531330-544462 info_outlinePHAGE_Entero_P4_NC_001609(6)51.50%Show info_outline
234.6Kbintact15050698288-732892 info_outlinePHAGE_Haemop_SuMu_NC_019455(17)54.51%Show info_outline
316.2Kbquestionable8022956711-972938 info_outlinePHAGE_Salmon_ST64B_NC_004313(3)48.77%Show info_outline
414.4Kbincomplete3081306933-1321421 info_outlinePHAGE_Plankt_PaV_LD_NC_016564(1)50.32%Show info_outline
552.2Kbintact130681749482-1801765 info_outlinePHAGE_Phage_Gifsy_1_NC_010392(10)52.80%Show info_outline
640Kbintact150472331028-2371044 info_outlinePHAGE_Salmon_118970_sal3_NC_031940(18)50.17%Show info_outline
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Region: The number assigned to the region.
Region Length: The length of the sequence of that region (in bp).
Completeness: A prediction of whether the region contains a intact or incomplete prophage based on the above criteria.
Score: The score of the region based on the above criteria.
# Total Proteins: The number of ORFs present in the region.
Region Position: The start and end positions of the region on the bacterial chromosome.
Most Common Phage: The phage(s) with the highest number of proteins most similar to those in the region.
GC %: The percentage of GC nucleotides of the region.

Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:

  1. If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
Method 2:
  1. If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
Method 3:
  1. If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
  2. If the size of the region is greater than 30 Kb, the score will be increased by 10.
  3. If there are at least 40 proteins in the region, the score will be increased by 10.
  4. If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
Compared the total score of method 2 with the total score of method 3, the bigger one is chosen as the total score of the region.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.

gi|00000000|ref|UGKV00000000.1| Klebsiella pneumoniae strain NCTC13439, whole genome shotgun 5735418, gc%: 56.95%

Download details as .txt file: detail.txt file_download

Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File

Region 1, total 17 CDS

#CDS PositionBLAST HitE-ValueSequence
1complement(531330..532337)PHAGE_Prochl_P_TIM68_NC_028955: putative zinc-containing alcohol dehydrogenase superfamily protein; NCTC13439_00573; phage(gi971760362)4.66e-06Showinfo_outline
2complement(532450..532917)Protein of uncharacterised function (DUF3237); NCTC13439_005740.0Showinfo_outline
3533084..533103attL0.0Showinfo_outline
4complement(533525..534634)HNH endonuclease; NCTC13439_005750.0Showinfo_outline
5complement(535008..535556)PHAGE_Entero_P4_NC_001609: DNA primase; NCTC13439_00576; phage(gi9627512)7.84e-102Showinfo_outline
6complement(535721..537268)PHAGE_Entero_P4_NC_001609: DNA primase; NCTC13439_00577; phage(gi9627512)0.0Showinfo_outline
7complement(537352..537672)PHAGE_Entero_P4_NC_001609: hypothetical protein; NCTC13439_00578; phage(gi9627513)8.98e-66Showinfo_outline
8complement(537669..537896)Uncharacterised protein; NCTC13439_005790.0Showinfo_outline
9complement(537893..538087)PHAGE_Entero_P4_NC_001609: putative CI repressor; NCTC13439_00580; phage(gi9627516)6.05e-30Showinfo_outline
10complement(538438..538704)PHAGE_Entero_P4_NC_001609: transcriptional regulator; NCTC13439_00583; phage(gi9627517)2.46e-41Showinfo_outline
11539246..539983PHAGE_Entero_P4_NC_001609: head size determination protein sid; NCTC13439_00584; phage(gi9627518)1.80e-93Showinfo_outline
12539980..540225PHAGE_Entero_186_NC_001317: B protein; NCTC13439_00585; phage(gi9634083)7.90e-18Showinfo_outline
13540243..540809PHAGE_Entero_P4_NC_001609: amber mutation-suppressing protein; NCTC13439_00586; phage(gi9627520)1.13e-74Showinfo_outline
14complement(541549..542196)Uncharacterised protein; NCTC13439_005870.0Showinfo_outline
15complement(542193..543062)phosphoglycolate phosphatase; NCTC13439_005880.0Showinfo_outline
16complement(543598..544149)PROPHAGE_Escher_CFT073: putative prophage integrase; NCTC13439_00589; phage(gi26250313)4.16e-90Showinfo_outline
17544462..544481attR0.0Showinfo_outline

Region 2, total 50 CDS

#CDS PositionBLAST HitE-ValueSequence
1complement(698288..698911)PHAGE_Entero_HK106_NC_019768: tail fiber assembly protein; NCTC13439_00740; phage(gi428783304)9.30e-43Showinfo_outline
2complement(698911..699654)PHAGE_Salmon_SEN5_NC_028701: tail fiber protein; NCTC13439_00741; phage(gi966201574)4.08e-49Showinfo_outline
3complement(699666..700322)PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: tail protein; NCTC13439_00742; phage(gi971741548)6.33e-31Showinfo_outline
4complement(700319..701380)PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: baseplate J protein; NCTC13439_00743; phage(gi971741547)2.08e-106Showinfo_outline
5complement(701380..701736)PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: hypothetical protein; NCTC13439_00744; phage(gi971741546)1.79e-35Showinfo_outline
6complement(701815..702396)PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: baseplate assembly protein; NCTC13439_00745; phage(gi971741545)2.05e-47Showinfo_outline
7complement(702380..703618)PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: tail protein P; NCTC13439_00746; phage(gi971741544)1.60e-80Showinfo_outline
8complement(703666..704916)PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: DNA circularization protein; NCTC13439_00747; phage(gi971741543)6.40e-35Showinfo_outline
9complement(704916..707093)PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: tail length tape measure protein; NCTC13439_00748; phage(gi971741542)5.35e-76Showinfo_outline
10complement(707207..707602)Uncharacterised protein; NCTC13439_007490.0Showinfo_outline
11complement(707602..707976)PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: tail tube protein; NCTC13439_00750; phage(gi971741539)6.62e-35Showinfo_outline
12complement(707988..708446)PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: tail sheath protein; NCTC13439_00751; phage(gi971741538)1.05e-40Showinfo_outline
13complement(708470..709405)PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: tail sheath protein; NCTC13439_00752; phage(gi971741538)7.28e-46Showinfo_outline
14complement(709405..709602)PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: hypothetical protein; NCTC13439_00753; phage(gi971741537)1.59e-12Showinfo_outline
15complement(709592..710170)PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: hypothetical protein; NCTC13439_00754; phage(gi971741536)5.90e-17Showinfo_outline
16complement(710240..710668)PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: hypothetical protein; NCTC13439_00755; phage(gi971741535)6.79e-25Showinfo_outline
17complement(710678..711076)Uncharacterised protein; NCTC13439_007560.0Showinfo_outline
18complement(711077..711985)PHAGE_Pseudo_LPB1_NC_027298: putative major head subunit protein; NCTC13439_00757; phage(gi848469613)1.62e-123Showinfo_outline
19complement(711997..712392)PHAGE_Pseudo_JBD25_NC_027992: hypothetical protein; NCTC13439_00758; phage(gi100037)1.81e-35Showinfo_outline
20complement(712385..713470)PHAGE_Ralsto_RS138_NC_029107: Mu-like prophage I protein; NCTC13439_00759; phage(gi985760943)5.16e-59Showinfo_outline
21complement(713705..714250)PHAGE_Pseudo_vB_PaeS_PM105_NC_028667: putative virion morphogenesis protein; NCTC13439_00760; phage(gi966198713)2.91e-13Showinfo_outline
22complement(714240..715511)PHAGE_Ralsto_RS138_NC_029107: virion morphogenesis protein; NCTC13439_00761; phage(gi985760940)2.40e-72Showinfo_outline
23complement(715504..717072)PHAGE_Pseudo_D3112_NC_005178: portal protein; NCTC13439_00762; phage(gi38229139)2.50e-147Showinfo_outline
24complement(717072..718775)PHAGE_Pseudo_JBD24_NC_020203: hypothetical protein; NCTC13439_00763; phage(gi448245076)0.0Showinfo_outline
25complement(718780..719139)Uncharacterised protein; NCTC13439_007640.0Showinfo_outline
26complement(719143..719472)PHAGE_Rhodob_RcapMu_NC_016165: hypothetical protein; NCTC13439_00765; phage(gi356870872)3.34e-40Showinfo_outline
27complement(719476..719679)Uncharacterised protein; NCTC13439_007660.0Showinfo_outline
28719720..720208Uncharacterised protein; NCTC13439_007670.0Showinfo_outline
29complement(720253..720753)PHAGE_Pseudo_JBD24_NC_020203: hypothetical protein; NCTC13439_00768; phage(gi448245073)1.76e-64Showinfo_outline
30complement(720755..721069)Uncharacterised protein; NCTC13439_007690.0Showinfo_outline
31complement(721066..721311)PHAGE_Pseudo_73_NC_007806: hypothetical protein ORF001; NCTC13439_00770; phage(gi148912829)2.12e-06Showinfo_outline
32complement(721308..721943)Uncharacterised protein; NCTC13439_007710.0Showinfo_outline
33complement(721933..722181)Protein of uncharacterised function (DUF2644); NCTC13439_007720.0Showinfo_outline
34complement(722163..722816)PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; NCTC13439_00773; phage(gi100131)1.43e-48Showinfo_outline
35complement(722897..723349)PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: hypothetical protein; NCTC13439_00774; phage(gi971741516)1.42e-08Showinfo_outline
36complement(723349..723783)PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: mor transcription activator family protein; NCTC13439_00775; phage(gi971741519)4.54e-21Showinfo_outline
37complement(723728..724204)PHAGE_Pseudo_D3112_NC_005178: hypothetical protein; NCTC13439_00776; phage(gi38229130)1.67e-27Showinfo_outline
38complement(724264..724479)Uncharacterised protein; NCTC13439_007770.0Showinfo_outline
39complement(724460..724972)PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; NCTC13439_00778; phage(gi23505476)1.70e-09Showinfo_outline
40complement(725108..725656)PHAGE_Entero_SfMu_NC_027382: hypothetical protein; NCTC13439_00779; phage(gi849255239)1.45e-10Showinfo_outline
41complement(725712..726251)PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC13439_00780; phage(gi428782349)2.84e-66Showinfo_outline
42complement(726485..727003)PHAGE_Escher_D108_NC_013594: hypothetical protein; NCTC13439_00781; phage(gi281199656)4.05e-19Showinfo_outline
43complement(727435..728073)PHAGE_Pseudo_vB_PaeS_PM105_NC_028667: hypothetical protein; NCTC13439_00782; phage(gi966198685)2.74e-89Showinfo_outline
44complement(728066..728257)Uncharacterised protein; NCTC13439_007830.0Showinfo_outline
45complement(728259..728492)Uncharacterised protein; NCTC13439_007840.0Showinfo_outline
46complement(728508..728726)Uncharacterised protein; NCTC13439_007850.0Showinfo_outline
47complement(728735..729628)PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: DNA transposition protein B; NCTC13439_00786; phage(gi971741505)6.69e-90Showinfo_outline
48complement(729641..731461)PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: transposase; NCTC13439_00787; phage(gi971741504)4.64e-162Showinfo_outline
49complement(731706..731969)PHAGE_Haemop_SuMu_NC_019455: Mu-like prophage FluMu DNA-binding protein Ner; NCTC13439_00788; phage(gi418489037)5.98e-32Showinfo_outline
50732167..732892PHAGE_Pseudo_MP22_NC_009818: c repressor; NCTC13439_00789; phage(gi157834973)2.59e-29Showinfo_outline

Region 3, total 24 CDS

#CDS PositionBLAST HitE-ValueSequence
1956711..956728attL0.0Showinfo_outline
2956899..958119PHAGE_Entero_phi80_NC_021190: integrase; NCTC13439_01024; phage(gi824479609)1.35e-64Showinfo_outline
3958119..958769Uncharacterised protein; NCTC13439_010250.0Showinfo_outline
4959340..959624PHAGE_Entero_P4_NC_001609: transcriptional regulator; NCTC13439_01026; phage(gi9627517)3.52e-07Showinfo_outline
5959645..960337Uncharacterised protein; NCTC13439_010270.0Showinfo_outline
6960334..961194Uncharacterised protein; NCTC13439_010280.0Showinfo_outline
7961187..961381Uncharacterised protein; NCTC13439_010290.0Showinfo_outline
8961444..961593Uncharacterised protein; NCTC13439_010300.0Showinfo_outline
9961580..961771Uncharacterised protein; NCTC13439_010310.0Showinfo_outline
10961755..963506PHAGE_Entero_P4_NC_001609: DNA primase; NCTC13439_01032; phage(gi9627512)1.29e-157Showinfo_outline
11963804..964064Uncharacterised protein; NCTC13439_010330.0Showinfo_outline
12complement(964103..964624)Uncharacterised protein; NCTC13439_010340.0Showinfo_outline
13complement(964626..965660)Uncharacterised protein; NCTC13439_010350.0Showinfo_outline
14965955..967121PHAGE_Entero_SfI_NC_027339: phage major capsid protein; NCTC13439_01036; phage(gi849250290)5.28e-61Showinfo_outline
15967173..967733PHAGE_Clostr_phi3626_NC_003524: putative prohead protease; NCTC13439_01037; phage(gi20065968)2.19e-32Showinfo_outline
16967735..968976PHAGE_Shigel_SfIV_NC_022749: portal protein; NCTC13439_01038; phage(gi557307529)8.07e-58Showinfo_outline
17968973..969308PHAGE_Entero_mEpX1_NC_019709: head-tail connector II; NCTC13439_01039; phage(gi428781879)1.88e-24Showinfo_outline
18969305..969604PHAGE_Shigel_SfII_NC_021857: head-tail connector protein; NCTC13439_01040; phage(gi526244642)2.27e-08Showinfo_outline
19969604..970047PHAGE_Burkho_phiE125_NC_003309: putative class I holin; NCTC13439_01041; phage(gi17975232)1.25e-14Showinfo_outline
20970040..970192Uncharacterised protein; NCTC13439_010420.0Showinfo_outline
21970174..970365Uncharacterised protein; NCTC13439_010430.0Showinfo_outline
22970323..970679PHAGE_Psychr_Psymv2_NC_023734: terminase small subunit; NCTC13439_01044; phage(gi593779760)7.40e-18Showinfo_outline
23970663..972324PHAGE_Brucel_BiPBO1_NC_031264: hypothetical protein; NCTC13439_01045; phage(gi100002)8.19e-104Showinfo_outline
24972938..972955attR0.0Showinfo_outline

Region 4, total 11 CDS

#CDS PositionBLAST HitE-ValueSequence
11306933..1306948attL0.0Showinfo_outline
21313085..1313798PHAGE_Clostr_phi24R_NC_019523: lysozyme-peptidase; NCTC13439_01413; phage(gi422936721)1.52e-13Showinfo_outline
31313879..1313952tRNA0.0Showinfo_outline
41314482..1315291PROPHAGE_Escher_Sakai: putative integrase; NCTC13439_01415; phage(gi15833788)8.13e-131Showinfo_outline
51315454..1316467PHAGE_Pseudo_F116_NC_006552: nucleoid-associated protein; NCTC13439_01416; phage(gi56692913)1.09e-30Showinfo_outline
61316483..1317700Uncharacterised protein; NCTC13439_014170.0Showinfo_outline
7complement(1317737..1318075)PHAGE_Xantho_vB_XveM_DIBBI_NC_017981: putative AraC family transcriptional regulator; NCTC13439_01418; phage(gi389060447)4.73e-05Showinfo_outline
8complement(1318136..1318381)PHAGE_Erwini_vB_EamM_Kwan_NC_031010: short tail fibers; NCTC13439_01419; phage(gi100183)3.13e-12Showinfo_outline
9complement(1318521..1319294)Quinone oxidoreductase 2; NCTC13439_014200.0Showinfo_outline
101319447..1320340PHAGE_Burkho_phi1026b_NC_005284: gp58; NCTC13439_01421; phage(gi38707948)1.95e-09Showinfo_outline
111321421..1321436attR0.0Showinfo_outline

Region 5, total 70 CDS

#CDS PositionBLAST HitE-ValueSequence
11749482..1750057PHAGE_Rhizob_vB_RleM_P10VF_NC_025429: RNA polymerase sigma-70 factor; NCTC13439_01865; phage(gi712913000)3.09e-10Showinfo_outline
21750090..1750740anti-RNA polymerase sigma factor SigE; NCTC13439_018660.0Showinfo_outline
31750740..1751696anti-sigma E factor; NCTC13439_018670.0Showinfo_outline
41751693..1752172Sigma factor RpoE regulatory protein RseC; NCTC13439_018680.0Showinfo_outline
51752356..1752369attL0.0Showinfo_outline
61752604..1753833PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage integrase protein; NCTC13439_01869; phage(gi169257266)0.0Showinfo_outline
7complement(1753811..1754086)PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; NCTC13439_01870; phage(gi169257265)7.38e-41Showinfo_outline
8complement(1754371..1754679)PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; NCTC13439_01871; phage(gi401817569)6.02e-35Showinfo_outline
9complement(1754676..1755335)PHAGE_Serrat_Eta_NC_021563: hypothetical protein; NCTC13439_01872; phage(gi514361067)3.45e-89Showinfo_outline
10complement(1755394..1756482)PHAGE_Phage_Gifsy_1_NC_010392: RecT; NCTC13439_01873; phage(gi169257263)1.62e-138Showinfo_outline
11complement(1756495..1759593)PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage exodeoxyribonuclease VIII-like protein; NCTC13439_01874; phage(gi169257262)0.0Showinfo_outline
12complement(1759731..1759886)PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; NCTC13439_01875; phage(gi169257260)2.10e-19Showinfo_outline
13complement(1759895..1760086)secreted protein; NCTC13439_018760.0Showinfo_outline
141760552..1760755PHAGE_Salmon_118970_sal4_NC_030919: hypothetical protein; NCTC13439_01877; phage(gi100018)4.50e-30Showinfo_outline
15complement(1761321..1761707)PHAGE_Salmon_SEN34_NC_028699: putative DNA-binding protein; NCTC13439_01878; phage(gi966201460)1.22e-79Showinfo_outline
161761811..1762041PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical prophage protein; putative Cro analog; NCTC13439_01879; phage(gi169257257)1.41e-10Showinfo_outline
171762044..1762280PHAGE_Entero_mEp237_NC_019704: CII protein; NCTC13439_01880; phage(gi435439306)2.06e-05Showinfo_outline
181762297..1762608PHAGE_Escher_HK639_NC_016158: cII; NCTC13439_01881; phage(gi356870652)1.07e-27Showinfo_outline
191762953..1763141PHAGE_Entero_P88_NC_026014: carboxylate-amine ligase; NCTC13439_01882; phage(gi744692719)2.22e-06Showinfo_outline
201763156..1764064PHAGE_Shigel_Stx_NC_029120: primosomal protein I; NCTC13439_01883; phage(gi985761262)7.10e-117Showinfo_outline
211764067..1764816PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage DNA replication protein; DnaC homolog; NCTC13439_01884; phage(gi169257254)2.61e-162Showinfo_outline
221764824..1765159PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; NCTC13439_01885; phage(gi169257253)5.41e-16Showinfo_outline
231765152..1765937PHAGE_Burkho_KS9_NC_013055: chromosome partitioning protein gp35; NCTC13439_01886; phage(gi255033718)3.19e-86Showinfo_outline
241765934..1766053Uncharacterised protein; NCTC13439_018870.0Showinfo_outline
251766066..1766440PHAGE_Salmon_SPN1S_NC_016761: hypothetical protein; NCTC13439_01888; phage(gi374531239)3.27e-27Showinfo_outline
261766477..1766683PHAGE_Vibrio_pYD38_A_NC_021534: hypothetical protein; NCTC13439_01889; phage(gi514051015)1.12e-44Showinfo_outline
271766680..1767207Ead domain protein; NCTC13439_018900.0Showinfo_outline
281767207..1767500PHAGE_Klebsi_phiKO2_NC_005857: Gp43; NCTC13439_01891; phage(gi46402129)6.20e-60Showinfo_outline
291767497..1768153PHAGE_Vibrio_pYD38_A_NC_021534: hypothetical protein; NCTC13439_01892; phage(gi514051012)1.33e-55Showinfo_outline
301769166..1769399PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage putative DNA damage-inducible protein; DinI homolog; NCTC13439_01893; phage(gi169257250)5.21e-35Showinfo_outline
311769788..1770384PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; NCTC13439_01894; phage(gi169257248)4.34e-111Showinfo_outline
321770587..1770889PHAGE_Erwini_phiEt88_NC_015295: hypothetical protein; NCTC13439_01895; phage(gi327198620)3.76e-46Showinfo_outline
331770886..1771242PHAGE_Entero_HK225_NC_019717: endodeoxyribonuclease; NCTC13439_01896; phage(gi428782440)4.36e-53Showinfo_outline
341771239..1771361Uncharacterised protein; NCTC13439_018970.0Showinfo_outline
351771358..1772179PHAGE_Entero_HK225_NC_019717: late gene regulator Q; NCTC13439_01898; phage(gi428782441)3.21e-146Showinfo_outline
361772425..1772736PHAGE_Salmon_ST64T_NC_004348: holin protein; NCTC13439_01899; phage(gi24371577)4.22e-51Showinfo_outline
371772733..1773272PHAGE_Erwini_vB_EamP_S6_NC_019514: endolysin; NCTC13439_01900; phage(gi422935930)1.85e-82Showinfo_outline
381773269..1773616PHAGE_Pseudo_vB_Pae_Kakheti25_NC_017864: holin; NCTC13439_01901; phage(gi388542661)7.53e-10Showinfo_outline
391773613..1773888PHAGE_Entero_mEp390_NC_019721: hypothetical protein; NCTC13439_01902; phage(gi428782715)4.25e-36Showinfo_outline
401774030..1774179Uncharacterised protein; NCTC13439_019030.0Showinfo_outline
41complement(1774124..1774408)Uncharacterised protein; NCTC13439_019040.0Showinfo_outline
421774541..1774813Uncharacterised protein; NCTC13439_019050.0Showinfo_outline
43complement(1774746..1774997)Uncharacterised protein; NCTC13439_019060.0Showinfo_outline
441775124..1775324PHAGE_Escher_vB_EcoS_FFH1_NC_024139: hypothetical protein; NCTC13439_01907; phage(gi640884327)1.89e-23Showinfo_outline
451775723..1775959PHAGE_Entero_ST104_NC_005841: hypothetical protein; NCTC13439_01908; phage(gi46358693)2.14e-11Showinfo_outline
461776018..1776206Uncharacterised protein; NCTC13439_019090.0Showinfo_outline
471776210..1777214PHAGE_Burkho_BcepMigl_NC_019917: terminase small subunit; NCTC13439_01910; phage(gi431809885)1.73e-56Showinfo_outline
481777192..1778496PHAGE_Acinet_vB_AbaS_TRS1_NC_031098: hypothetical protein; NCTC13439_01911; phage(gi100002)0.0Showinfo_outline
491778501..1779925PHAGE_Pseudo_PaMx28_NC_028931: portal protein; NCTC13439_01912; phage(gi971757076)7.84e-76Showinfo_outline
501779909..1781021PHAGE_Pseudo_PS_1_NC_029066: head morphogenesis protein; NCTC13439_01913; phage(gi985757697)1.17e-111Showinfo_outline
511781128..1781892PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC13439_01914; phage(gi356870605)1.61e-126Showinfo_outline
521781980..1783116PHAGE_Rhizob_vB_RglS_P106B_NC_023566: putative coat protein; NCTC13439_01915; phage(gi589890404)8.38e-88Showinfo_outline
531783166..1783423PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC13439_01916; phage(gi356870607)3.48e-14Showinfo_outline
541783427..1783837PHAGE_Pseudo_PS_1_NC_029066: hypothetical protein; NCTC13439_01917; phage(gi985757703)6.85e-20Showinfo_outline
551783839..1784222PHAGE_Pseudo_YMC11/02/R656_NC_028657: hypothetical protein; NCTC13439_01918; phage(gi966197873)3.47e-29Showinfo_outline
561784224..1784775PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC13439_01919; phage(gi356870610)3.46e-35Showinfo_outline
571784772..1785164PHAGE_Pseudo_phiPSA1_NC_024365: hypothetical protein; NCTC13439_01920; phage(gi658307759)2.31e-21Showinfo_outline
581785188..1786360PHAGE_Vibrio_VpKK5_NC_026610: tail subunit; NCTC13439_01921; phage(gi764162154)6.75e-14Showinfo_outline
591786414..1786896PHAGE_Pseudo_phiPSA1_NC_024365: hypothetical protein; NCTC13439_01922; phage(gi658307708)1.36e-11Showinfo_outline
601787064..1787231Uncharacterised protein; NCTC13439_019230.0Showinfo_outline
611787408..1787938PHAGE_Salmon_SE1_NC_011802: hypothetical protein; NCTC13439_01924; phage(gi219681238)5.45e-80Showinfo_outline
621788020..1788517Uncharacterised protein; NCTC13439_019250.0Showinfo_outline
631789021..1792587PHAGE_Pseudo_vB_PaeS_PM105_NC_028667: putative tail length tape-measure protein; NCTC13439_01926; phage(gi966198725)8.06e-76Showinfo_outline
641792587..1793027PHAGE_Pseudo_PAJU2_NC_011373: hypothetical protein; NCTC13439_01927; phage(gi209552438)4.26e-38Showinfo_outline
651793231..1793713PHAGE_Pseudo_D3_NC_002484: hypothetical protein; NCTC13439_01928; phage(gi9635614)9.87e-37Showinfo_outline
661793723..1794103PHAGE_Pseudo_PAJU2_NC_011373: hypothetical protein; NCTC13439_01929; phage(gi209552440)2.45e-19Showinfo_outline
671794100..1795344PHAGE_Pseudo_PMG1_NC_016765: putative tail protein; NCTC13439_01930; phage(gi374531670)9.73e-29Showinfo_outline
681795744..1797159PHAGE_Pseudo_PS_1_NC_029066: tail protein; NCTC13439_01931; phage(gi985757719)1.15e-64Showinfo_outline
691797236..1799524PHAGE_Klebsi_PKP126_NC_031053: hypothetical protein; NCTC13439_01932; phage(gi100059)3.39e-12Showinfo_outline
701801765..1801778attR0.0Showinfo_outline

Region 6, total 49 CDS

#CDS PositionBLAST HitE-ValueSequence
12331028..2331092attL0.0Showinfo_outline
2complement(2331203..2332195)PHAGE_Salmon_ST64B_NC_004313: Integrase protein; NCTC13439_02448; phage(gi23505472)0.0Showinfo_outline
3complement(2332197..2332424)PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; NCTC13439_02449; phage(gi23505473)7.57e-41Showinfo_outline
4complement(2332732..2332932)Uncharacterised protein; NCTC13439_024500.0Showinfo_outline
5complement(2332922..2333533)PHAGE_Entero_Arya_NC_031048: hypothetical protein; NCTC13439_02451; phage(gi100057)3.87e-66Showinfo_outline
6complement(2333530..2333910)PHAGE_Entero_HK225_NC_019717: HNH endonuclease; NCTC13439_02452; phage(gi428782431)1.11e-82Showinfo_outline
7complement(2333910..2334404)PHAGE_Salmon_vB_SemP_Emek_NC_018275: hypothetical protein; NCTC13439_02453; phage(gi399498826)1.45e-08Showinfo_outline
8complement(2334401..2334607)PHAGE_Vibrio_pYD38_A_NC_021534: hypothetical protein; NCTC13439_02454; phage(gi514051015)1.12e-43Showinfo_outline
9complement(2334604..2334996)Uncharacterised protein; NCTC13439_024550.0Showinfo_outline
10complement(2334993..2335127)Uncharacterised protein; NCTC13439_024560.0Showinfo_outline
11complement(2335124..2335909)PHAGE_Burkho_KS9_NC_013055: chromosome partitioning protein gp35; NCTC13439_02457; phage(gi255033718)5.65e-84Showinfo_outline
12complement(2335909..2336112)PHAGE_Entero_mEp390_NC_019721: hypothetical protein; NCTC13439_02458; phage(gi428782699)1.03e-13Showinfo_outline
13complement(2336296..2337213)PHAGE_Vibrio_X29_NC_024369: DNA recombination-dependent growth factor C; NCTC13439_02459; phage(gi658311187)3.98e-13Showinfo_outline
14complement(2337928..2338623)PHAGE_Salmon_ST64B_NC_004313: regulatory protein; NCTC13439_02460; phage(gi23505482)1.19e-117Showinfo_outline
152338999..2339460PHAGE_Entero_mEp390_NC_019721: hypothetical protein; NCTC13439_02461; phage(gi428782704)1.46e-95Showinfo_outline
162339698..2339910PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; NCTC13439_02462; phage(gi100119)6.69e-13Showinfo_outline
172339867..2340781PHAGE_Erwini_PEp14_NC_016767: putative phage O family protein; NCTC13439_02463; phage(gi374531901)1.05e-39Showinfo_outline
182340778..2341587PHAGE_Salmon_118970_sal3_NC_031940: prohead core protein protease; NCTC13439_02464; phage(gi100061)2.65e-139Showinfo_outline
192341597..2341974PHAGE_Salmon_ST64B_NC_004313: holiday-junction resolvase; NCTC13439_02465; phage(gi23505489)1.77e-64Showinfo_outline
202342059..2342967PHAGE_Entero_SfV_NC_003444: hypothetical protein; NCTC13439_02466; phage(gi19549032)2.81e-154Showinfo_outline
212342981..2343559Protein of uncharacterised function (DUF1133); NCTC13439_024670.0Showinfo_outline
222343712..2343951Uncharacterised protein; NCTC13439_024680.0Showinfo_outline
232344117..2344503PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; NCTC13439_02469; phage(gi100130)6.20e-77Showinfo_outline
242344490..2344771PHAGE_Entero_mEp390_NC_019721: putative holin; NCTC13439_02470; phage(gi428782713)2.19e-26Showinfo_outline
252344771..2345400PHAGE_Cronob_ENT39118_NC_019934: endolysin; NCTC13439_02471; phage(gi431811063)1.72e-110Showinfo_outline
262345593..2345823PHAGE_Entero_mEp390_NC_019721: hypothetical protein; NCTC13439_02472; phage(gi428782716)3.68e-17Showinfo_outline
272346181..2346426PHAGE_Salmon_SPN9CC_NC_017985: hypothetical protein; NCTC13439_02473; phage(gi389060534)1.17e-08Showinfo_outline
282347296..2347790PHAGE_Salmon_ST64B_NC_004313: terminase small subunit; NCTC13439_02474; phage(gi23505446)2.20e-107Showinfo_outline
292347787..2349517PHAGE_Salmon_ST64B_NC_004313: Terminase large subunit; NCTC13439_02475; phage(gi23505447)0.0Showinfo_outline
302349527..2349712PHAGE_Salmon_ST64B_NC_004313: putative integral membrane protein; NCTC13439_02476; phage(gi23505448)9.61e-12Showinfo_outline
312349712..2350941PHAGE_Salmon_ST64B_NC_004313: Portal Protein; NCTC13439_02477; phage(gi23505449)0.0Showinfo_outline
322350925..2351581PHAGE_Salmon_ST64B_NC_004313: Pro-head protease; NCTC13439_02478; phage(gi23505450)6.08e-129Showinfo_outline
332351596..2352804PHAGE_Entero_phiP27_NC_003356: putative major capsid protein; NCTC13439_02479; phage(gi18249904)0.0Showinfo_outline
342352843..2353046PHAGE_Entero_SfI_NC_027339: hypothetical protein; NCTC13439_02480; phage(gi849250291)6.73e-12Showinfo_outline
352353043..2353363PHAGE_Entero_mEp235_NC_019708: head-tail connector II; NCTC13439_02481; phage(gi428781817)6.49e-20Showinfo_outline
362353433..2353630PHAGE_Entero_HK140_NC_019710: hypothetical protein; NCTC13439_02482; phage(gi428781947)6.49e-31Showinfo_outline
372353632..2353964PHAGE_Pseudo_PAJU2_NC_011373: putative head-tail adaptor; NCTC13439_02483; phage(gi209552428)6.67e-36Showinfo_outline
382353957..2354496PHAGE_Entero_mEp235_NC_019708: hypothetical protein; NCTC13439_02484; phage(gi428781820)7.52e-104Showinfo_outline
392354493..2354858PHAGE_Entero_HK022_NC_002166: gp11; NCTC13439_02485; phage(gi9634130)3.14e-62Showinfo_outline
402354915..2355406PHAGE_Entero_HK022_NC_002166: major tail subunit; NCTC13439_02486; phage(gi9634131)4.18e-81Showinfo_outline
412355450..2355803PHAGE_Entero_mEp235_NC_019708: tail assembly chaperone; NCTC13439_02487; phage(gi428781823)2.62e-47Showinfo_outline
422355836..2356099PHAGE_Entero_HK140_NC_019710: tail protein gpT-like protein; NCTC13439_02488; phage(gi428781953)4.71e-11Showinfo_outline
432356589..2359015PHAGE_Entero_HK022_NC_002166: tail length tape measure protein; NCTC13439_02489; phage(gi9634134)1.64e-165Showinfo_outline
442359015..2359494PHAGE_Pseudo_PAJU2_NC_011373: hypothetical protein; NCTC13439_02490; phage(gi209552438)9.65e-42Showinfo_outline
452359481..2359963PHAGE_Pseudo_D3_NC_002484: hypothetical protein; NCTC13439_02491; phage(gi9635614)1.22e-35Showinfo_outline
462359971..2360357PHAGE_Pseudo_phi297_NC_016762: hypothetical protein; NCTC13439_02492; phage(gi374531303)3.00e-21Showinfo_outline
472360354..2363422PHAGE_Pseudo_PS_1_NC_029066: tail protein; NCTC13439_02493; phage(gi985757719)5.38e-74Showinfo_outline
482363498..2365789PHAGE_Klebsi_PKP126_NC_031053: hypothetical protein; NCTC13439_02494; phage(gi100059)8.43e-12Showinfo_outline
492371044..2371108attR0.0Showinfo_outline
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Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)

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Length: 5735418 bps
Phages: 6
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Lysis
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Fiber Protein
Plate Protein
tRNA

Download data as .txt file: png_input file_download