Submission Results

Sequence Name: Not Available

GenBank Accession Number: UGKZ00000000.1

GenInfo (GI) Number: 0000000000

Download Results: UGKZ00000000.1.PHASTER.zip

gi|00000000|ref|UGKZ00000000.1| Klebsiella pneumoniae strain NCTC8172, whole genome shotgun 5388061, gc%: 57.36%

Download summary as .txt file: summary.txt file_download

Total: 4 prophage regions have been identified, of which 3 regions are intact, 0 regions are incomplete, and 1 regions are questionable.

RegionRegion LengthCompletenessScore# Total ProteinsRegion PositionMost Common PhageGC %Details
112.9Kbquestionable75131320569-1333495 info_outlinePHAGE_Entero_P4_NC_001609(7)50.20%Show info_outline
260Kbintact100632867074-2927083 info_outlinePHAGE_Cronob_ENT47670_NC_019927(15)53.21%Show info_outline
341Kbintact140583064816-3105888 info_outlinePHAGE_Salmon_SEN34_NC_028699(25)50.67%Show info_outline
436.7Kbintact100313283902-3320660 info_outlinePHAGE_Klebsi_phiKO2_NC_005857(21)53.83%Show info_outline
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Region: The number assigned to the region.
Region Length: The length of the sequence of that region (in bp).
Completeness: A prediction of whether the region contains a intact or incomplete prophage based on the above criteria.
Score: The score of the region based on the above criteria.
# Total Proteins: The number of ORFs present in the region.
Region Position: The start and end positions of the region on the bacterial chromosome.
Most Common Phage: The phage(s) with the highest number of proteins most similar to those in the region.
GC %: The percentage of GC nucleotides of the region.

Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:

  1. If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
Method 2:
  1. If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
Method 3:
  1. If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
  2. If the size of the region is greater than 30 Kb, the score will be increased by 10.
  3. If there are at least 40 proteins in the region, the score will be increased by 10.
  4. If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
Compared the total score of method 2 with the total score of method 3, the bigger one is chosen as the total score of the region.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.

gi|00000000|ref|UGKZ00000000.1| Klebsiella pneumoniae strain NCTC8172, whole genome shotgun 5388061, gc%: 57.36%

Download details as .txt file: detail.txt file_download

Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File

Region 1, total 15 CDS

#CDS PositionBLAST HitE-ValueSequence
11320569..1321453PHAGE_Burkho_phi1026b_NC_005284: gp58; NCTC8172_01352; phage(gi38707948)1.53e-07Showinfo_outline
21321578..1322378plasmid-like protein; NCTC8172_013530.0Showinfo_outline
31322567..1322595attL0.0Showinfo_outline
4complement(1322925..1323113)Uncharacterised protein; NCTC8172_013540.0Showinfo_outline
5complement(1323684..1326017)PHAGE_Entero_P4_NC_001609: DNA primase; NCTC8172_01355; phage(gi9627512)0.0Showinfo_outline
6complement(1326032..1326352)PHAGE_Entero_P4_NC_001609: hypothetical protein; NCTC8172_01356; phage(gi9627513)6.62e-66Showinfo_outline
7complement(1326349..1326576)Uncharacterised protein; NCTC8172_013570.0Showinfo_outline
8complement(1326573..1326767)PHAGE_Entero_P4_NC_001609: putative CI repressor; NCTC8172_01358; phage(gi9627516)3.01e-31Showinfo_outline
9complement(1327127..1327393)PHAGE_Entero_P4_NC_001609: transcriptional regulator; NCTC8172_01361; phage(gi9627517)4.93e-41Showinfo_outline
101327931..1328674PHAGE_Entero_P4_NC_001609: head size determination protein sid; NCTC8172_01362; phage(gi9627518)6.82e-22Showinfo_outline
111328678..1328917PHAGE_Entero_186_NC_001317: B protein; NCTC8172_01363; phage(gi9634083)5.57e-19Showinfo_outline
121328933..1329499PHAGE_Entero_P4_NC_001609: amber mutation-suppressing protein; NCTC8172_01364; phage(gi9627520)4.48e-78Showinfo_outline
13complement(1329711..1332158)Predicted type IV restriction endonuclease; NCTC8172_013650.0Showinfo_outline
14complement(1332192..1333382)PHAGE_Entero_P4_NC_001609: integrase; NCTC8172_01366; phage(gi9627511)1.27e-81Showinfo_outline
151333495..1333523attR0.0Showinfo_outline

Region 2, total 65 CDS

#CDS PositionBLAST HitE-ValueSequence
12867074..2867088attL0.0Showinfo_outline
22876261..2877361PHAGE_Entero_mEp460_NC_019716: integrase; NCTC8172_02878; phage(gi428782338)1.18e-133Showinfo_outline
3complement(2877447..2877764)PHAGE_Entero_mEp390_NC_019721: hypothetical protein; NCTC8172_02879; phage(gi428782690)1.18e-30Showinfo_outline
4complement(2877764..2878003)PHAGE_Entero_HK225_NC_019717: hypothetical protein; NCTC8172_02880; phage(gi428782404)7.41e-23Showinfo_outline
5complement(2878071..2878817)Uncharacterised protein; NCTC8172_028810.0Showinfo_outline
6complement(2878832..2880790)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC8172_02882; phage(gi431810496)1.01e-05Showinfo_outline
7complement(2880877..2883354)PHAGE_Cronob_ENT47670_NC_019927: putative tail protein; NCTC8172_02883; phage(gi431810495)0.0Showinfo_outline
8complement(2883341..2883736)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC8172_02884; phage(gi431810526)9.27e-46Showinfo_outline
9complement(2883733..2884203)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC8172_02885; phage(gi431810518)2.54e-35Showinfo_outline
10complement(2884203..2884679)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC8172_02886; phage(gi431810519)5.27e-52Showinfo_outline
11complement(2885036..2885215)Uncharacterised protein; NCTC8172_028870.0Showinfo_outline
12complement(2885256..2888618)PHAGE_Vibrio_pYD38_A_NC_021534: tail length tape measure protein; NCTC8172_02888; phage(gi514051037)0.0Showinfo_outline
13complement(2888678..2889292)Uncharacterised protein; NCTC8172_028890.0Showinfo_outline
14complement(2889344..2889685)Uncharacterised protein; NCTC8172_028900.0Showinfo_outline
15complement(2889790..2890170)PHAGE_Pseudo_YMC11/07/P54_PAE_BP_NC_030909: hypothetical protein; NCTC8172_02891; phage(gi100052)2.35e-07Showinfo_outline
16complement(2890258..2890461)PHAGE_Salmon_LSPA1_NC_026017: hypothetical protein; NCTC8172_02892; phage(gi744692876)4.82e-07Showinfo_outline
17complement(2890574..2891278)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC8172_02893; phage(gi431810508)3.97e-82Showinfo_outline
18complement(2891346..2892110)PHAGE_Salmon_II_E1_NC_010495: major tail subunit; NCTC8172_02894; phage(gi170676305)1.80e-60Showinfo_outline
19complement(2892168..2892551)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC8172_02895; phage(gi431810530)7.92e-38Showinfo_outline
20complement(2892548..2892916)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC8172_02896; phage(gi431810532)5.37e-69Showinfo_outline
21complement(2892919..2893281)PHAGE_Mannhe_vB_MhS_535AP2_NC_028853: hypothetical protein; NCTC8172_02897; phage(gi971749596)3.18e-26Showinfo_outline
22complement(2893454..2893834)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC8172_02898; phage(gi431810531)2.53e-39Showinfo_outline
23complement(2893837..2894130)Uncharacterised protein; NCTC8172_028990.0Showinfo_outline
24complement(2894140..2895237)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC8172_02900; phage(gi431810503)0.0Showinfo_outline
25complement(2895249..2895680)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC8172_02901; phage(gi431810525)2.42e-56Showinfo_outline
26complement(2895684..2897069)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC8172_02902; phage(gi431810499)0.0Showinfo_outline
27complement(2897373..2898401)PHAGE_Cronob_ENT47670_NC_019927: phage head morphogenesis; NCTC8172_02903; phage(gi431810507)2.36e-153Showinfo_outline
28complement(2898364..2899785)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC8172_02904; phage(gi431810500)0.0Showinfo_outline
29complement(2899797..2901356)PHAGE_Escher_HK639_NC_016158: terminase large subunit; NCTC8172_02905; phage(gi356870602)0.0Showinfo_outline
30complement(2901353..2901925)PHAGE_Cronob_phiES15_NC_018454: terminase small subunit; NCTC8172_02906; phage(gi401817591)1.26e-88Showinfo_outline
312901951..2902277Uncharacterised protein; NCTC8172_029070.0Showinfo_outline
32complement(2902656..2903609)Uncharacterised protein; NCTC8172_029080.0Showinfo_outline
33complement(2903656..2903793)Uncharacterised protein; NCTC8172_029090.0Showinfo_outline
34complement(2903796..2904263)PHAGE_Salmon_HK620_NC_002730: endopeptidase; NCTC8172_02910; phage(gi13559860)1.61e-77Showinfo_outline
35complement(2904260..2904784)PHAGE_Entero_P1_NC_005856: Lyz; NCTC8172_02911; phage(gi46401639)8.73e-64Showinfo_outline
36complement(2904768..2905088)PHAGE_Entero_N15_NC_001901: gp53; NCTC8172_02912; phage(gi9630496)2.67e-26Showinfo_outline
37complement(2906208..2906786)Protein of uncharacterised function (DUF1133); NCTC8172_029140.0Showinfo_outline
38complement(2906783..2907442)PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; NCTC8172_02915; phage(gi100124)9.65e-128Showinfo_outline
39complement(2907435..2907743)PHAGE_Burkho_Bcep22_NC_005262: hypothetical protein; NCTC8172_02916; phage(gi38640327)2.04e-30Showinfo_outline
40complement(2908297..2908566)PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; NCTC8172_02917; phage(gi423262434)1.87e-46Showinfo_outline
41complement(2908613..2909008)PHAGE_Entero_933W_NC_000924: hypothetical protein; NCTC8172_02918; phage(gi9632543)3.03e-71Showinfo_outline
42complement(2909474..2909764)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; NCTC8172_02919; phage(gi431810533)1.43e-12Showinfo_outline
43complement(2909761..2909988)Uncharacterised protein; NCTC8172_029200.0Showinfo_outline
44complement(2909988..2910449)PHAGE_Salmon_vB_SosS_Oslo_NC_018279: hypothetical protein; NCTC8172_02921; phage(gi399528795)2.33e-13Showinfo_outline
45complement(2910442..2911518)PHAGE_Salmon_SPN1S_NC_016761: putative bacteriophage protein; NCTC8172_02922; phage(gi374531224)1.38e-179Showinfo_outline
46complement(2911515..2911649)Uncharacterised protein; NCTC8172_029230.0Showinfo_outline
47complement(2911646..2912431)PHAGE_Burkho_KS9_NC_013055: chromosome partitioning protein gp35; NCTC8172_02924; phage(gi255033718)1.20e-84Showinfo_outline
48complement(2912424..2912645)Uncharacterised protein; NCTC8172_029250.0Showinfo_outline
49complement(2912645..2913040)Uncharacterised protein; NCTC8172_029260.0Showinfo_outline
50complement(2913067..2914116)PHAGE_Entero_mEp390_NC_019721: hypothetical protein; NCTC8172_02927; phage(gi428782706)3.87e-40Showinfo_outline
51complement(2914113..2914367)Uncharacterised protein; NCTC8172_029280.0Showinfo_outline
52complement(2914563..2914883)PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage transcriptional activator; Lambda gpCII analog; NCTC8172_02929; phage(gi169257278)1.41e-49Showinfo_outline
53complement(2914923..2915150)PHAGE_Salmon_ST160_NC_014900: Cro; NCTC8172_02930; phage(gi318065926)1.02e-33Showinfo_outline
542915541..2915960PHAGE_Salmon_ST160_NC_014900: C2; NCTC8172_02931; phage(gi318065925)3.52e-90Showinfo_outline
552916039..2916959Uncharacterised protein; NCTC8172_029320.0Showinfo_outline
56complement(2917002..2917205)PHAGE_Salmon_118970_sal4_NC_030919: hypothetical protein; NCTC8172_02933; phage(gi100018)3.41e-27Showinfo_outline
572917727..2917837Uncharacterised protein; NCTC8172_029340.0Showinfo_outline
582917830..2918123PHAGE_Serrat_Eta_NC_021563: Kil protein; NCTC8172_02935; phage(gi514361051)6.83e-06Showinfo_outline
592918196..2918417Uncharacterised protein; NCTC8172_029360.0Showinfo_outline
602918426..2918989PHAGE_Shewan_1/41_NC_025458: DNA polymerase III beta subunit; NCTC8172_02937; phage(gi712915574)1.04e-31Showinfo_outline
612918986..2919210PHAGE_Salmon_Fels_1_NC_010391: hypothetical protein; NCTC8172_02938; phage(gi169257161)3.86e-20Showinfo_outline
622919207..2919551Uncharacterised protein; NCTC8172_029390.0Showinfo_outline
632919544..2920179PHAGE_Serrat_Eta_NC_021563: hypothetical protein; NCTC8172_02940; phage(gi514361067)4.17e-62Showinfo_outline
642920571..2920831PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC8172_02941; phage(gi428782341)1.21e-25Showinfo_outline
652927083..2927097attR0.0Showinfo_outline

Region 3, total 61 CDS

#CDS PositionBLAST HitE-ValueSequence
13064816..3064828attL0.0Showinfo_outline
23064986..3065234PHAGE_Entero_cdtI_NC_009514: hypothetical protein; NCTC8172_03073; phage(gi148609412)5.30e-34Showinfo_outline
3complement(3065744..3065884)transposase, ISL3 family; NCTC8172_030740.0Showinfo_outline
43066222..3066581PHAGE_Salmon_epsilon34_NC_011976: GtrA; bactoprenol-linked glucose translocase; NCTC8172_03075; phage(gi221328639)1.98e-45Showinfo_outline
53066578..3067495PHAGE_Shigel_SfII_NC_021857: bactoprenol glucosyltransferase; NCTC8172_03076; phage(gi526244662)1.03e-170Showinfo_outline
63067503..3068975PHAGE_Salmon_ST64T_NC_004348: O-antigen conversion protein C; NCTC8172_03077; phage(gi24371535)2.02e-56Showinfo_outline
7complement(3069004..3069405)PHAGE_Bacter_APSE_2_NC_011551: tail fiber; NCTC8172_03078; phage(gi212499733)1.03e-19Showinfo_outline
8complement(3069405..3070322)PHAGE_Salmon_SEN34_NC_028699: tail fiber protein; NCTC8172_03079; phage(gi966201444)1.31e-21Showinfo_outline
9complement(3070322..3071098)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC8172_03080; phage(gi966201443)4.65e-94Showinfo_outline
10complement(3071095..3072294)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC8172_03081; phage(gi966201442)0.0Showinfo_outline
11complement(3072294..3072647)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC8172_03082; phage(gi966201441)1.62e-57Showinfo_outline
12complement(3072649..3073302)PHAGE_Salmon_SEN34_NC_028699: baseplate assembly protein; NCTC8172_03083; phage(gi966201439)4.53e-94Showinfo_outline
13complement(3073365..3074594)PHAGE_Entero_phiP27_NC_003356: hypothetical protein; NCTC8172_03084; phage(gi18249886)7.15e-146Showinfo_outline
14complement(3074682..3075014)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC8172_03085; phage(gi966201437)2.76e-32Showinfo_outline
15complement(3075014..3076078)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC8172_03086; phage(gi966201436)1.17e-180Showinfo_outline
16complement(3076081..3076383)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC8172_03087; phage(gi966201435)5.40e-36Showinfo_outline
17complement(3076384..3076959)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC8172_03088; phage(gi966201434)3.73e-89Showinfo_outline
18complement(3076959..3078881)PHAGE_Salmon_SEN34_NC_028699: tail tape measure protein; NCTC8172_03089; phage(gi966201433)0.0Showinfo_outline
19complement(3078871..3079023)Uncharacterised protein; NCTC8172_030900.0Showinfo_outline
20complement(3079065..3079514)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC8172_03091; phage(gi966201432)1.26e-50Showinfo_outline
21complement(3079518..3079958)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC8172_03092; phage(gi966201431)4.88e-90Showinfo_outline
22complement(3079969..3081120)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC8172_03093; phage(gi966201430)0.0Showinfo_outline
23complement(3081122..3081673)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC8172_03094; phage(gi966201429)1.66e-45Showinfo_outline
24complement(3081666..3082070)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC8172_03095; phage(gi966201428)7.95e-52Showinfo_outline
25complement(3082070..3082576)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC8172_03096; phage(gi966201427)4.31e-22Showinfo_outline
26complement(3082573..3082992)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC8172_03097; phage(gi966201426)1.59e-54Showinfo_outline
27complement(3082961..3083242)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC8172_03098; phage(gi966201425)4.23e-08Showinfo_outline
28complement(3083282..3084223)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC8172_03099; phage(gi966201424)8.16e-168Showinfo_outline
29complement(3084235..3084729)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC8172_03100; phage(gi966201423)1.90e-55Showinfo_outline
30complement(3084733..3085935)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC8172_03101; phage(gi966201422)5.99e-137Showinfo_outline
31complement(3085987..3086739)PHAGE_Salmon_SEN34_NC_028699: putative head morphogenesis protein; NCTC8172_03102; phage(gi966201421)4.99e-65Showinfo_outline
32complement(3087204..3088043)PHAGE_Salmon_SEN34_NC_028699: putative portal protein; NCTC8172_03103; phage(gi966201420)2.09e-151Showinfo_outline
33complement(3088281..3089681)PHAGE_Edward_GF_2_NC_026611: putative terminase large subunit; NCTC8172_03104; phage(gi764162249)0.0Showinfo_outline
34complement(3089632..3090420)PHAGE_Entero_933W_NC_000924: putative small subunit terminase; NCTC8172_03105; phage(gi9632516)5.44e-19Showinfo_outline
35complement(3090478..3090795)PHAGE_Entero_SfV_NC_003444: putative Rz1 lytic protein; NCTC8172_03106; phage(gi19549039)1.40e-46Showinfo_outline
36complement(3091000..3091503)PHAGE_Salmon_vB_SemP_Emek_NC_018275: lysin; NCTC8172_03107; phage(gi399498856)1.17e-99Showinfo_outline
37complement(3091475..3091744)PHAGE_Entero_HK225_NC_019717: holin; NCTC8172_03108; phage(gi428782443)1.58e-35Showinfo_outline
38complement(3092764..3093609)PHAGE_Erwini_phiEaH2_NC_019929: hypothetical protein; NCTC8172_03110; phage(gi431810758)3.41e-144Showinfo_outline
39complement(3094009..3094578)Uncharacterised protein; NCTC8172_031110.0Showinfo_outline
40complement(3094667..3094752)tRNA0.0Showinfo_outline
41complement(3094897..3095679)PHAGE_Cronob_ENT39118_NC_019934: antitermination protein; NCTC8172_03113; phage(gi431811056)7.36e-151Showinfo_outline
42complement(3095676..3095993)Uncharacterised protein; NCTC8172_031140.0Showinfo_outline
43complement(3095996..3097657)PHAGE_Entero_c_1_NC_019706: hypothetical protein; NCTC8172_03115; phage(gi428781787)0.0Showinfo_outline
44complement(3097726..3097869)PHAGE_Entero_c_1_NC_019706: hypothetical protein; NCTC8172_03116; phage(gi428781787)7.28e-06Showinfo_outline
45complement(3097936..3098889)PHAGE_Entero_phiP27_NC_003356: hypothetical protein; NCTC8172_03117; phage(gi18249881)3.76e-59Showinfo_outline
46complement(3098886..3099083)PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; NCTC8172_03118; phage(gi100119)2.13e-07Showinfo_outline
473099464..3100138PHAGE_Cronob_ENT47670_NC_019927: putative transcriptional regulator; NCTC8172_03119; phage(gi431810510)1.08e-41Showinfo_outline
483100301..3100714Uncharacterised protein; NCTC8172_031200.0Showinfo_outline
493100894..3101103PHAGE_Salmon_Fels_1_NC_010391: hypothetical protein; NCTC8172_03121; phage(gi169257167)9.85e-22Showinfo_outline
503101084..3101431PHAGE_Salmon_Fels_1_NC_010391: hypothetical protein; NCTC8172_03122; phage(gi169257166)8.54e-07Showinfo_outline
513101424..3101639PHAGE_Entero_phiP27_NC_003356: hypothetical protein; NCTC8172_03123; phage(gi18249871)3.99e-18Showinfo_outline
523101611..3101829Uncharacterised protein; NCTC8172_031240.0Showinfo_outline
533101826..3102257PHAGE_Salmon_Fels_1_NC_010391: hypothetical protein; NCTC8172_03125; phage(gi169257164)5.98e-66Showinfo_outline
543102238..3102819PHAGE_Entero_phiP27_NC_003356: hypothetical protein; NCTC8172_03126; phage(gi18249870)3.12e-58Showinfo_outline
553102828..3103532PHAGE_Entero_phiP27_NC_003356: hypothetical protein; NCTC8172_03127; phage(gi18249878)4.70e-100Showinfo_outline
563103525..3103959Uncharacterised protein; NCTC8172_031280.0Showinfo_outline
573103943..3104167PHAGE_Salmon_Fels_1_NC_010391: hypothetical protein; NCTC8172_03129; phage(gi169257161)3.62e-32Showinfo_outline
583104164..3104310PHAGE_Salmon_Fels_1_NC_010391: hypothetical protein; NCTC8172_03130; phage(gi169257158)6.40e-24Showinfo_outline
593104321..3104512PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; NCTC8172_03131; phage(gi966201450)8.22e-30Showinfo_outline
60complement(3104493..3105674)PHAGE_Salmon_SEN34_NC_028699: integrase; NCTC8172_03132; phage(gi966201449)0.0Showinfo_outline
613105888..3105900attR0.0Showinfo_outline

Region 4, total 31 CDS

#CDS PositionBLAST HitE-ValueSequence
1complement(3283902..3291428)PHAGE_Klebsi_phiKO2_NC_005857: Gp21; NCTC8172_03319; phage(gi46402107)0.0Showinfo_outline
2complement(3291418..3296490)PHAGE_Klebsi_phiKO2_NC_005857: Gp21; NCTC8172_03320; phage(gi46402107)0.0Showinfo_outline
3complement(3296553..3297146)PHAGE_Klebsi_phiKO2_NC_005857: Gp20; NCTC8172_03321; phage(gi46402106)3.63e-98Showinfo_outline
4complement(3297578..3298288)PHAGE_Klebsi_phiKO2_NC_005857: Gp18; NCTC8172_03322; phage(gi46402104)3.71e-166Showinfo_outline
5complement(3298290..3299045)PHAGE_Klebsi_phiKO2_NC_005857: Gp17; NCTC8172_03323; phage(gi46402103)2.27e-158Showinfo_outline
6complement(3299042..3299380)PHAGE_Klebsi_phiKO2_NC_005857: Gp16; NCTC8172_03324; phage(gi46402102)3.72e-73Showinfo_outline
7complement(3299380..3302715)PHAGE_Klebsi_phiKO2_NC_005857: putative tapemeasure protein; NCTC8172_03325; phage(gi46402101)0.0Showinfo_outline
8complement(3302948..3303313)PHAGE_Klebsi_phiKO2_NC_005857: putative tail assembly chaperone; NCTC8172_03326; phage(gi46402099)8.81e-73Showinfo_outline
9complement(3303371..3303832)PHAGE_Klebsi_phiKO2_NC_005857: major tail shaft subunit; NCTC8172_03327; phage(gi46402098)2.21e-88Showinfo_outline
10complement(3303864..3304265)PHAGE_Klebsi_phiKO2_NC_005857: Gp11; NCTC8172_03328; phage(gi46402097)1.15e-87Showinfo_outline
11complement(3304262..3304651)PHAGE_Klebsi_phiKO2_NC_005857: Gp10; NCTC8172_03329; phage(gi46402096)2.39e-77Showinfo_outline
12complement(3304632..3304970)PHAGE_Klebsi_phiKO2_NC_005857: Gp9; NCTC8172_03330; phage(gi46402095)8.25e-72Showinfo_outline
13complement(3304967..3305284)PHAGE_Klebsi_phiKO2_NC_005857: Gp8; NCTC8172_03331; phage(gi46402094)1.49e-62Showinfo_outline
14complement(3305265..3305552)PHAGE_Klebsi_phiKO2_NC_005857: Gp7; NCTC8172_03332; phage(gi46402093)5.75e-29Showinfo_outline
15complement(3305611..3306897)PHAGE_Klebsi_phiKO2_NC_005857: major capsid head protein precursor; NCTC8172_03333; phage(gi46402092)0.0Showinfo_outline
16complement(3306975..3307895)PHAGE_Klebsi_phiKO2_NC_005857: putative head maturation protease; NCTC8172_03334; phage(gi46402091)0.0Showinfo_outline
17complement(3307932..3309191)PHAGE_Klebsi_phiKO2_NC_005857: putative portal protein; NCTC8172_03335; phage(gi46402090)0.0Showinfo_outline
18complement(3309364..3311085)PHAGE_Klebsi_phiKO2_NC_005857: putative large terminase subunit; NCTC8172_03336; phage(gi46402088)0.0Showinfo_outline
19complement(3311085..3311519)PHAGE_Klebsi_phiKO2_NC_005857: putative small terminase subunit; NCTC8172_03337; phage(gi46402087)1.63e-31Showinfo_outline
20complement(3311767..3312198)PHAGE_Klebsi_phiKO2_NC_005857: Gp62; NCTC8172_03338; phage(gi46402148)1.04e-57Showinfo_outline
21complement(3312195..3312518)PHAGE_Klebsi_phiKO2_NC_005857: Gp61; NCTC8172_03339; phage(gi46402147)3.74e-07Showinfo_outline
223313159..3313383Uncharacterised protein; NCTC8172_033400.0Showinfo_outline
23complement(3313422..3313859)PHAGE_Entero_mEp237_NC_019704: hypothetical protein; NCTC8172_03341; phage(gi435439325)5.40e-16Showinfo_outline
24complement(3314809..3315159)PHAGE_Vibrio_pYD38_A_NC_021534: hypothetical protein; NCTC8172_03342; phage(gi514050994)1.59e-18Showinfo_outline
25complement(3315156..3315653)PHAGE_Salmon_SPN9CC_NC_017985: phage lysozyme; NCTC8172_03343; phage(gi389060531)1.59e-98Showinfo_outline
26complement(3315653..3315868)PHAGE_Entero_cdtI_NC_009514: lysis protein; NCTC8172_03344; phage(gi148609439)1.75e-40Showinfo_outline
273316061..3316231Uncharacterised protein; NCTC8172_033450.0Showinfo_outline
28complement(3318120..3318722)PHAGE_Pectob_ZF40_NC_019522: hypothetical protein; NCTC8172_03348; phage(gi422936665)5.04e-99Showinfo_outline
29complement(3318739..3319770)PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC8172_03349; phage(gi428782365)7.38e-118Showinfo_outline
30complement(3319970..3320362)PHAGE_Shigel_SfIV_NC_022749: regulation protein; NCTC8172_03350; phage(gi557307569)1.43e-19Showinfo_outline
31complement(3320403..3320660)PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; NCTC8172_03351; phage(gi423262436)5.05e-23Showinfo_outline
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Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)

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Length: 5388061 bps
Phages: 4
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Lysis
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Fiber Protein
Plate Protein
tRNA

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