Submission Results

Sequence Name: Not Available

GenBank Accession Number: UGLS00000000.1

GenInfo (GI) Number: 0000000000

Download Results: UGLS00000000.1.PHASTER.zip

gi|00000000|ref|UGLS00000000.1| Klebsiella pneumoniae strain NCTC9657, whole genome shotgun 5240444, gc%: 56.77%

Download summary as .txt file: summary.txt file_download

Total: 9 prophage regions have been identified, of which 6 regions are intact, 3 regions are incomplete, and 0 regions are questionable.

RegionRegion LengthCompletenessScore# Total ProteinsRegion PositionMost Common PhageGC %Details
128Kbincomplete50161383125-1411207 info_outlinePHAGE_Salmon_RE_2010_NC_019488(6)53.11%Show info_outline
224.4Kbintact110421415426-1439859 info_outlinePHAGE_Mannhe_vB_MhM_3927AP2_NC_028766(5)57.26%Show info_outline
347.1Kbintact100562021895-2069040 info_outlinePHAGE_Pectob_ZF40_NC_019522(12)52.82%Show info_outline
430Kbintact150482179251-2209307 info_outlinePHAGE_Mannhe_vB_MhM_3927AP2_NC_028766(15)54.70%Show info_outline
514.4Kbincomplete60212609311-2623733 info_outlinePHAGE_Entero_Mu_NC_000929(10)50.61%Show info_outline
634.8Kbintact150492863728-2898537 info_outlinePHAGE_Mannhe_vB_MhM_3927AP2_NC_028766(16)53.69%Show info_outline
712.2Kbincomplete4073234764-3247037 info_outlinePHAGE_Halovi_HGTV_1_NC_021328(1)56.09%Show info_outline
840.7Kbintact150484508028-4548749 info_outlinePHAGE_Entero_186_NC_001317(19)52.26%Show info_outline
937.5Kbintact150455012311-5049893 info_outlinePHAGE_Pseudo_JBD69_NC_030908(7)57.17%Show info_outline
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Region: The number assigned to the region.
Region Length: The length of the sequence of that region (in bp).
Completeness: A prediction of whether the region contains a intact or incomplete prophage based on the above criteria.
Score: The score of the region based on the above criteria.
# Total Proteins: The number of ORFs present in the region.
Region Position: The start and end positions of the region on the bacterial chromosome.
Most Common Phage: The phage(s) with the highest number of proteins most similar to those in the region.
GC %: The percentage of GC nucleotides of the region.

Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:

  1. If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
Method 2:
  1. If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
Method 3:
  1. If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
  2. If the size of the region is greater than 30 Kb, the score will be increased by 10.
  3. If there are at least 40 proteins in the region, the score will be increased by 10.
  4. If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
Compared the total score of method 2 with the total score of method 3, the bigger one is chosen as the total score of the region.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.

gi|00000000|ref|UGLS00000000.1| Klebsiella pneumoniae strain NCTC9657, whole genome shotgun 5240444, gc%: 56.77%

Download details as .txt file: detail.txt file_download

Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File

Region 1, total 18 CDS

#CDS PositionBLAST HitE-ValueSequence
11383125..1383136attL0.0Showinfo_outline
21384429..1384677PHAGE_Cronob_vB_CsaM_GAP32_NC_019401: glutaredoxin; NCTC9657_01450; phage(gi414087106)5.39e-17Showinfo_outline
3complement(1384684..1385067)inner membrane protein; NCTC9657_014510.0Showinfo_outline
41385334..1387019TrkA, Potassium channel-family protein; NCTC9657_014520.0Showinfo_outline
5complement(1387240..1387461)Uncharacterised protein; NCTC9657_014540.0Showinfo_outline
6complement(1387619..1387834)PHAGE_Salmon_RE_2010_NC_019488: OGR regulator of late gene transcription; NCTC9657_01455; phage(gi418489727)1.04e-28Showinfo_outline
7complement(1387902..1388171)PHAGE_Salmon_RE_2010_NC_019488: gene D protein; NCTC9657_01456; phage(gi418489726)5.21e-44Showinfo_outline
8complement(1388532..1388984)PHAGE_Salmon_RE_2010_NC_019488: gene D protein; NCTC9657_01457; phage(gi418489726)6.66e-90Showinfo_outline
9complement(1388981..1389466)PHAGE_Salmon_RE_2010_NC_019488: tail protein; NCTC9657_01458; phage(gi418489725)2.98e-106Showinfo_outline
101389636..1390025PHAGE_Salmon_RE_2010_NC_019488: capsid packaging protein; NCTC9657_01459; phage(gi418489696)1.74e-78Showinfo_outline
11complement(1390046..1391005)PHAGE_Thermu_OH2_NC_021784: SMF family protein; NCTC9657_01460; phage(gi526118339)2.99e-24Showinfo_outline
121392936..1393313PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; NCTC9657_01461; phage(gi557307573)1.94e-82Showinfo_outline
13complement(1393460..1393852)Uncharacterised protein; NCTC9657_014620.0Showinfo_outline
14complement(1394177..1394365)PHAGE_Salmon_RE_2010_NC_019488: hypothetical protein; NCTC9657_01463; phage(gi418489693)1.01e-30Showinfo_outline
15complement(1394826..1395944)PHAGE_Pseudo_phi3_NC_030940: hypothetical protein; NCTC9657_01464; phage(gi100001)2.67e-34Showinfo_outline
16complement(1396679..1397323)PHAGE_Salmon_RE_2010_NC_019488: replication protein; NCTC9657_01466; phage(gi418489692)2.09e-125Showinfo_outline
171397337..1397930PHAGE_Erwini_ENT90_NC_019932: phage integrase family protein; NCTC9657_01467; phage(gi431810942)4.46e-62Showinfo_outline
181411207..1411218attR0.0Showinfo_outline

Region 2, total 42 CDS

#CDS PositionBLAST HitE-ValueSequence
1complement(1415426..1415995)PHAGE_Pseudo_DMS3_NC_008717: putative c repressor; NCTC9657_01487; phage(gi156523050)8.67e-05Showinfo_outline
21416157..1416408PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: transcriptional regulatory protein; NCTC9657_01488; phage(gi971741503)2.77e-12Showinfo_outline
31416405..1417346PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: transposase; NCTC9657_01489; phage(gi971741504)1.97e-36Showinfo_outline
41417343..1418461PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: transposase; NCTC9657_01490; phage(gi971741504)5.67e-91Showinfo_outline
51418474..1419370PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: DNA transposition protein B; NCTC9657_01491; phage(gi971741505)2.70e-90Showinfo_outline
61419386..1419658Uncharacterised protein; NCTC9657_014920.0Showinfo_outline
71419658..1419894Uncharacterised protein; NCTC9657_014930.0Showinfo_outline
81419933..1420562PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: hypothetical protein; NCTC9657_01494; phage(gi971741508)3.29e-57Showinfo_outline
91420840..1420971Uncharacterised protein; NCTC9657_014950.0Showinfo_outline
101420977..1421354PHAGE_Pseudo_PMG1_NC_016765: hypothetical protein; NCTC9657_01496; phage(gi374531692)2.15e-06Showinfo_outline
11complement(1421409..1421786)PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; NCTC9657_01497; phage(gi557307573)1.94e-82Showinfo_outline
121422343..1422573Uncharacterised protein; NCTC9657_014980.0Showinfo_outline
131422570..1423109probable regulatory domain; NCTC9657_014990.0Showinfo_outline
141423148..1423915PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; NCTC9657_01500; phage(gi557307558)2.01e-73Showinfo_outline
151423912..1424160Uncharacterised protein; NCTC9657_015010.0Showinfo_outline
161424132..1424329Uncharacterised protein; NCTC9657_015020.0Showinfo_outline
171424326..1424748PHAGE_Pseudo_D3112_NC_005178: hypothetical protein; NCTC9657_01503; phage(gi38229130)9.12e-25Showinfo_outline
181424745..1425194PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: mor transcription activator family protein; NCTC9657_01504; phage(gi971741519)1.88e-18Showinfo_outline
191425295..1425945PHAGE_Pseudo_MD8_NC_031091: prohead core protein protease; NCTC9657_01505; phage(gi100061)1.84e-49Showinfo_outline
201425933..1426217Uncharacterised protein; NCTC9657_015060.0Showinfo_outline
211426189..1426809Uncharacterised protein; NCTC9657_015070.0Showinfo_outline
221426806..1426985Uncharacterised protein; NCTC9657_015080.0Showinfo_outline
231427056..1427283Uncharacterised protein; NCTC9657_015090.0Showinfo_outline
241427362..1427634PHAGE_Pseudo_JBD69_NC_030908: hypothetical protein; NCTC9657_01510; phage(gi100030)1.25e-17Showinfo_outline
251427781..1427879Uncharacterised protein; NCTC9657_015110.0Showinfo_outline
261428012..1428668PHAGE_Ralsto_RS138_NC_029107: hypothetical protein; NCTC9657_01512; phage(gi985760938)3.51e-82Showinfo_outline
271428652..1429797PHAGE_Pseudo_JBD93_NC_030918: hypothetical protein; NCTC9657_01513; phage(gi100029)1.68e-174Showinfo_outline
28complement(1429773..1430627)Uncharacterised protein; NCTC9657_015140.0Showinfo_outline
291431445..1431660PHAGE_Entero_HK544_NC_019767: tail length tape measure protein; NCTC9657_01515; phage(gi428783229)2.22e-05Showinfo_outline
301431691..1432329Uncharacterised protein; NCTC9657_015160.0Showinfo_outline
311432307..1432657Uncharacterised protein; NCTC9657_015170.0Showinfo_outline
321433181..1433615PHAGE_Pseudo_B3_NC_006548: tail length tape measure protein; NCTC9657_01518; phage(gi56692618)7.53e-20Showinfo_outline
331434009..1434134PHAGE_Gordon_BaxterFox_NC_031226: hypothetical protein; NCTC9657_01519; phage(gi100016)3.01e-05Showinfo_outline
341434131..1434328Uncharacterised protein; NCTC9657_015200.0Showinfo_outline
351434531..1435325PHAGE_Pseudo_H70_NC_027384: virion structural protein; NCTC9657_01521; phage(gi849255424)1.28e-33Showinfo_outline
361435276..1435503PHAGE_Pseudo_vB_PaeS_PM105_NC_028667: hypothetical protein; NCTC9657_01522; phage(gi966198728)6.21e-11Showinfo_outline
371435552..1436010PHAGE_Salmon_118970_sal1_NC_031930: hypothetical protein; NCTC9657_01523; phage(gi100027)1.40e-18Showinfo_outline
381435953..1436219PHAGE_Salmon_37_NC_029045: RepB; NCTC9657_01524; phage(gi974141260)9.12e-08Showinfo_outline
391436315..1436548PHAGE_Entero_Enc34_NC_019524: tail assembly protein; NCTC9657_01525; phage(gi422936757)2.75e-22Showinfo_outline
401436559..1436762PHAGE_Pseudo_PaMx28_NC_028931: hypothetical protein; NCTC9657_01526; phage(gi971757100)1.58e-14Showinfo_outline
411436762..1439047PHAGE_Burkho_BcepNazgul_NC_005091: conserved tail assembly protein; NCTC9657_01527; phage(gi34610151)0.0Showinfo_outline
421439059..1439859PHAGE_Pseudo_JBD88a_NC_020200: hypothetical protein; NCTC9657_01528; phage(gi448244729)7.91e-42Showinfo_outline

Region 3, total 61 CDS

#CDS PositionBLAST HitE-ValueSequence
12021895..2022128PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; NCTC9657_02095; phage(gi371496158)3.16e-06Showinfo_outline
22022148..2022597PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; NCTC9657_02096; phage(gi371496158)4.28e-23Showinfo_outline
32022915..2023637Regulatory activator SdiA; NCTC9657_020970.0Showinfo_outline
4complement(2023705..2023929)Protein of uncharacterised function (DUF2594); NCTC9657_020980.0Showinfo_outline
52024391..2025047BarA-associated response regulator UvrY (GacA, SirA); NCTC9657_020990.0Showinfo_outline
62025044..2026876PHAGE_Bacill_vB_BanS_Tsamsa_NC_023007: hypothetical protein; NCTC9657_02100; phage(gi564292625)1.45e-06Showinfo_outline
72026934..2027482CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; NCTC9657_021010.0Showinfo_outline
82027633..2027708tRNA0.0Showinfo_outline
92027749..2027822tRNA0.0Showinfo_outline
102027836..2027922tRNA0.0Showinfo_outline
112027867..2027928attL0.0Showinfo_outline
12complement(2028054..2029070)PHAGE_Pectob_ZF40_NC_019522: putative integrase; NCTC9657_02105; phage(gi422936642)1.17e-162Showinfo_outline
13complement(2029054..2029299)PHAGE_Pectob_ZF40_NC_019522: hypothetical protein; NCTC9657_02106; phage(gi422936643)5.65e-11Showinfo_outline
14complement(2029508..2029693)PHAGE_Pectob_ZF40_NC_019522: hypothetical protein; NCTC9657_02107; phage(gi422936645)1.67e-13Showinfo_outline
15complement(2029695..2030261)PHAGE_Pectob_ZF40_NC_019522: hypothetical protein; NCTC9657_02108; phage(gi422936646)3.92e-73Showinfo_outline
16complement(2030261..2032411)PHAGE_Pectob_ZF40_NC_019522: putative exonuclease; NCTC9657_02109; phage(gi422936647)1.08e-118Showinfo_outline
17complement(2032441..2032686)PHAGE_Salmon_IME207_NC_031924: glutaredoxin; NCTC9657_02110; phage(gi100075)1.05e-22Showinfo_outline
18complement(2032694..2033017)PHAGE_Pectob_ZF40_NC_019522: hypothetical protein; NCTC9657_02111; phage(gi422936648)9.13e-08Showinfo_outline
19complement(2033931..2034395)PHAGE_Pseudo_F116_NC_006552: transcriptional regulator; NCTC9657_02112; phage(gi56692918)2.11e-11Showinfo_outline
202034495..2034728PHAGE_Salmon_SPN3UB_NC_019545: putative Cro; NCTC9657_02113; phage(gi423262425)3.74e-06Showinfo_outline
212034789..2035235PHAGE_Pectob_ZF40_NC_019522: putative cII repressor; NCTC9657_02114; phage(gi422936652)1.53e-41Showinfo_outline
222035258..2035476PHAGE_Pectob_ZF40_NC_019522: hypothetical protein; NCTC9657_02115; phage(gi422936653)1.10e-19Showinfo_outline
232035479..2036003PHAGE_Pectob_ZF40_NC_019522: putative replication protein; NCTC9657_02116; phage(gi422936654)4.76e-62Showinfo_outline
242036003..2036461PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; NCTC9657_02117; phage(gi100002)2.86e-12Showinfo_outline
252036458..2037846PHAGE_Entero_ST104_NC_005841: gp12; NCTC9657_02118; phage(gi46358676)3.54e-133Showinfo_outline
262037885..2038019Uncharacterised protein; NCTC9657_021190.0Showinfo_outline
272038023..2038256PHAGE_Pectob_ZF40_NC_019522: hypothetical protein; NCTC9657_02120; phage(gi422936657)5.75e-17Showinfo_outline
282038253..2038402Uncharacterised protein; NCTC9657_021210.0Showinfo_outline
292038399..2038989PHAGE_Shigel_Ss_VASD_NC_028685: transcriptional activator; NCTC9657_02122; phage(gi966200429)1.53e-118Showinfo_outline
302038989..2039261PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; NCTC9657_02123; phage(gi100124)3.41e-14Showinfo_outline
312039258..2041213PHAGE_Pectob_ZF40_NC_019522: putative methylase; NCTC9657_02124; phage(gi422936661)0.0Showinfo_outline
322041213..2041551PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; NCTC9657_02125; phage(gi100052)3.39e-55Showinfo_outline
332041999..2042595PHAGE_Pectob_ZF40_NC_019522: hypothetical protein; NCTC9657_02126; phage(gi422936663)3.78e-95Showinfo_outline
342043065..2043361PHAGE_Burkho_BcepC6B_NC_005887: hypothetical protein; NCTC9657_02127; phage(gi48697191)7.41e-06Showinfo_outline
352043390..2043833Uncharacterised protein; NCTC9657_021280.0Showinfo_outline
362044070..2045692PHAGE_Pelagi_HTVC010P_NC_020481: head-tail connector protein; NCTC9657_02129; phage(gi460042262)1.36e-75Showinfo_outline
372045692..2045925Uncharacterised protein; NCTC9657_021300.0Showinfo_outline
382045912..2046760PHAGE_Pelagi_HTVC010P_NC_020481: hypothetical protein; NCTC9657_02131; phage(gi460042264)2.16e-06Showinfo_outline
392046979..2047890PHAGE_Pelagi_HTVC010P_NC_020481: putative major capsid protein; NCTC9657_02132; phage(gi460042266)1.11e-24Showinfo_outline
402047949..2048512PHAGE_Vibrio_QH_NC_027397: major tail subunit; NCTC9657_02133; phage(gi849256115)8.73e-11Showinfo_outline
412048514..2050502PHAGE_Pelagi_HTVC010P_NC_020481: putative tail tubular protein B; NCTC9657_02134; phage(gi460042270)1.26e-72Showinfo_outline
422050505..2050954PHAGE_Salmon_BP12B_NC_031271: hypothetical protein; NCTC9657_02135; phage(gi100027)2.94e-21Showinfo_outline
432050957..2051445PHAGE_Burkho_BcepC6B_NC_005887: hypothetical protein; NCTC9657_02136; phage(gi48697204)1.41e-06Showinfo_outline
442051451..2053406Uncharacterised protein; NCTC9657_021370.0Showinfo_outline
452053403..2054731PHAGE_Liberi_SC2_NC_019550: hypothetical protein; NCTC9657_02138; phage(gi423262513)2.90e-07Showinfo_outline
462054734..2055498PHAGE_Burkho_BcepC6B_NC_005887: structural protein; NCTC9657_02139; phage(gi48697207)3.80e-17Showinfo_outline
472055507..2057231PHAGE_Escher_phiV10_NC_007804: structural protein; NCTC9657_02140; phage(gi89152441)6.75e-28Showinfo_outline
48complement(2057565..2058215)PHAGE_Gordon_GordDuk1_NC_029060: hypothetical protein; NCTC9657_02141; phage(gi985757590)7.51e-05Showinfo_outline
492058362..2058706Uncharacterised protein; NCTC9657_021420.0Showinfo_outline
502058703..2060313PHAGE_Mesorh_phagevB_MloP_Lo5R7ANS_NC_025431: putative DNA maturase B; NCTC9657_02143; phage(gi712913297)4.82e-16Showinfo_outline
512060329..2062887PHAGE_Salmon_epsilon15_NC_004775: tail fiber; NCTC9657_02144; phage(gi30387399)6.91e-26Showinfo_outline
522062976..2063116Uncharacterised protein; NCTC9657_021450.0Showinfo_outline
532063202..2063426PHAGE_Entero_VT2phi_272_NC_028656: holin; NCTC9657_02146; phage(gi966197762)1.60e-28Showinfo_outline
542063410..2063946PHAGE_Entero_N15_NC_001901: gp54; NCTC9657_02147; phage(gi9630497)5.19e-97Showinfo_outline
552063943..2064302PHAGE_Vibrio_pYD38_A_NC_021534: hypothetical protein; NCTC9657_02148; phage(gi514050994)5.43e-20Showinfo_outline
562064556..2064617attR0.0Showinfo_outline
572065286..2065954PHAGE_Sphing_PAU_NC_019521: gp60; NCTC9657_02149; phage(gi435844563)3.14e-07Showinfo_outline
58complement(2065979..2067121)tyrosine-specific transporter; NCTC9657_021500.0Showinfo_outline
592067382..2067621putative metal-binding protein; NCTC9657_021510.0Showinfo_outline
60complement(2067657..2068154)Ferritin-like protein 2; NCTC9657_021520.0Showinfo_outline
612068663..2069040PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; NCTC9657_02153; phage(gi557307573)9.13e-82Showinfo_outline

Region 4, total 48 CDS

#CDS PositionBLAST HitE-ValueSequence
1complement(2179251..2179628)PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; NCTC9657_02270; phage(gi557307573)6.58e-82Showinfo_outline
2complement(2179999..2180553)Uncharacterised protein; NCTC9657_022710.0Showinfo_outline
32180707..2180958PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: transcriptional regulatory protein; NCTC9657_02272; phage(gi971741503)2.77e-12Showinfo_outline
42180955..2183012PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: transposase; NCTC9657_02273; phage(gi971741504)2.33e-154Showinfo_outline
52183025..2183921PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: DNA transposition protein B; NCTC9657_02274; phage(gi971741505)2.70e-90Showinfo_outline
62183937..2184209Uncharacterised protein; NCTC9657_022750.0Showinfo_outline
72184209..2184445Uncharacterised protein; NCTC9657_022760.0Showinfo_outline
82184484..2185113PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: hypothetical protein; NCTC9657_02277; phage(gi971741508)3.29e-57Showinfo_outline
92185391..2185522Uncharacterised protein; NCTC9657_022780.0Showinfo_outline
102185528..2185905PHAGE_Pseudo_PMG1_NC_016765: hypothetical protein; NCTC9657_02279; phage(gi374531692)2.15e-06Showinfo_outline
11complement(2185960..2186337)PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; NCTC9657_02280; phage(gi557307573)1.10e-82Showinfo_outline
122186893..2187123Uncharacterised protein; NCTC9657_022810.0Showinfo_outline
132187120..2187659probable regulatory domain; NCTC9657_022820.0Showinfo_outline
142187698..2188465PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; NCTC9657_02283; phage(gi557307558)2.01e-73Showinfo_outline
152188462..2188710Uncharacterised protein; NCTC9657_022840.0Showinfo_outline
162188682..2188879Uncharacterised protein; NCTC9657_022850.0Showinfo_outline
172189000..2189296PHAGE_Pseudo_LPB1_NC_027298: putative Mu-like GemA; NCTC9657_02286; phage(gi848469594)3.39e-15Showinfo_outline
182189293..2189673PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: mor transcription activator family protein; NCTC9657_02287; phage(gi971741519)3.14e-12Showinfo_outline
192189842..2190231PHAGE_Pseudo_MD8_NC_031091: prohead core protein protease; NCTC9657_02288; phage(gi100061)7.17e-19Showinfo_outline
202190479..2190763Uncharacterised protein; NCTC9657_022890.0Showinfo_outline
212190735..2191304Uncharacterised protein; NCTC9657_022900.0Showinfo_outline
222191894..2192325PHAGE_Pseudo_JBD88a_NC_020200: hypothetical protein; NCTC9657_02291; phage(gi448244713)1.58e-45Showinfo_outline
232192318..2192539Uncharacterised protein; NCTC9657_022920.0Showinfo_outline
242192548..2194332PHAGE_Ralsto_RS138_NC_029107: hypothetical protein; NCTC9657_02293; phage(gi985760938)0.0Showinfo_outline
252194326..2195174PHAGE_Pseudo_D3112_NC_005178: portal protein; NCTC9657_02294; phage(gi38229139)2.77e-95Showinfo_outline
262195849..2196106PHAGE_Pseudo_LPB1_NC_027298: putative virion morphogenesis protein; NCTC9657_02295; phage(gi848469606)2.51e-11Showinfo_outline
272196271..2196468PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: hypothetical protein; NCTC9657_02296; phage(gi971741537)8.95e-10Showinfo_outline
282196631..2196969PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: tail sheath protein; NCTC9657_02297; phage(gi971741538)1.70e-12Showinfo_outline
292196951..2197718PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: tail sheath protein; NCTC9657_02298; phage(gi971741538)1.00e-55Showinfo_outline
302197894..2198268PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: tail tube protein; NCTC9657_02299; phage(gi971741539)1.36e-35Showinfo_outline
312198268..2198663Uncharacterised protein; NCTC9657_023000.0Showinfo_outline
322198660..2198776Uncharacterised protein; NCTC9657_023010.0Showinfo_outline
332198777..2199244PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: tail length tape measure protein; NCTC9657_02302; phage(gi971741542)2.02e-09Showinfo_outline
342199193..2199342Uncharacterised protein; NCTC9657_023030.0Showinfo_outline
352199430..2199831PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: tail length tape measure protein; NCTC9657_02304; phage(gi971741542)3.15e-20Showinfo_outline
362200258..2200557PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: tail length tape measure protein; NCTC9657_02305; phage(gi971741542)3.45e-05Showinfo_outline
372200948..2201484PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: DNA circularization protein; NCTC9657_02306; phage(gi971741543)3.72e-27Showinfo_outline
382201756..2202025Uncharacterised protein; NCTC9657_023070.0Showinfo_outline
392202239..2202577PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: tail protein P; NCTC9657_02308; phage(gi971741544)2.11e-07Showinfo_outline
402202824..2203168Mu-like prophage tail protein gpP; NCTC9657_023090.0Showinfo_outline
412203165..2203353PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: tail protein P; NCTC9657_02310; phage(gi971741544)1.54e-08Showinfo_outline
422203397..2203918PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: baseplate assembly protein; NCTC9657_02311; phage(gi971741545)1.53e-26Showinfo_outline
432204108..2204464PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: hypothetical protein; NCTC9657_02312; phage(gi971741546)2.03e-36Showinfo_outline
442204464..2204745PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: baseplate J protein; NCTC9657_02313; phage(gi971741547)4.84e-26Showinfo_outline
452204951..2205517PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: baseplate J protein; NCTC9657_02314; phage(gi971741547)1.66e-55Showinfo_outline
462205514..2206170PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: tail protein; NCTC9657_02315; phage(gi971741548)5.64e-31Showinfo_outline
472206182..2206928PHAGE_Salmon_SEN5_NC_028701: tail fiber protein; NCTC9657_02316; phage(gi966201574)9.39e-50Showinfo_outline
482207544..2209307PHAGE_Rhodoc_ReqiPoco6_NC_023694: tail fiber protein; NCTC9657_02318; phage(gi593774716)1.13e-07Showinfo_outline

Region 5, total 21 CDS

#CDS PositionBLAST HitE-ValueSequence
1complement(2609311..2609856)PHAGE_Bacill_SPbeta_NC_001884: IMPB/MUCB/SAMB family protein; NCTC9657_02745; phage(gi9630142)2.42e-06Showinfo_outline
2complement(2609870..2610352)PHAGE_Cronob_ENT39118_NC_019934: DNA polymerase; NCTC9657_02746; phage(gi431811050)2.62e-07Showinfo_outline
3complement(2610558..2611418)Uncharacterised protein; NCTC9657_027470.0Showinfo_outline
4complement(2611418..2613268)PHAGE_Entero_Mu_NC_000929: tail fiber; NCTC9657_02748; phage(gi9633540)5.16e-17Showinfo_outline
5complement(2613281..2614168)PHAGE_Entero_HK630_NC_019723: tail fiber assembly protein; NCTC9657_02749; phage(gi428782810)4.51e-33Showinfo_outline
6complement(2614168..2614917)PHAGE_Entero_T4_NC_000866: gp37 long tail fiber, distal subunit; NCTC9657_02750; phage(gi9632629)1.73e-41Showinfo_outline
7complement(2614917..2615501)PHAGE_Entero_Mu_NC_000929: hypothetical protein; NCTC9657_02751; phage(gi9633539)2.79e-22Showinfo_outline
8complement(2615486..2616559)PHAGE_Entero_Mu_NC_000929: hypothetical protein; NCTC9657_02752; phage(gi9633538)4.60e-61Showinfo_outline
9complement(2616549..2616743)PHAGE_Vibrio_12B12_NC_021070: hypothetical protein; NCTC9657_02753; phage(gi481019150)9.75e-08Showinfo_outline
10complement(2616806..2617183)PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; NCTC9657_02754; phage(gi557307573)1.94e-82Showinfo_outline
11complement(2617532..2617870)PHAGE_Entero_Mu_NC_000929: Mor; NCTC9657_02755; phage(gi9633507)2.52e-41Showinfo_outline
12complement(2617867..2618421)PHAGE_Entero_Mu_NC_000929: hypothetical protein; NCTC9657_02756; phage(gi9633506)4.87e-43Showinfo_outline
13complement(2618418..2618678)Uncharacterised protein; NCTC9657_027570.0Showinfo_outline
14complement(2618675..2618914)PHAGE_Clostr_phiCTC2B_NC_030951: hypothetical protein; NCTC9657_02758; phage(gi100016)5.64e-09Showinfo_outline
15complement(2618995..2619612)PHAGE_Vibrio_12B12_NC_021070: hypothetical protein; NCTC9657_02759; phage(gi481019189)2.15e-86Showinfo_outline
16complement(2619628..2619915)PHAGE_Entero_Mu_NC_000929: hypothetical protein; NCTC9657_02760; phage(gi9633546)4.04e-25Showinfo_outline
17complement(2619925..2620182)PHAGE_Pseudo_JBD93_NC_030918: hypothetical protein; NCTC9657_02761; phage(gi100013)1.85e-22Showinfo_outline
18complement(2620185..2620424)PHAGE_Entero_Mu_NC_000929: kil; NCTC9657_02762; phage(gi9633497)3.92e-19Showinfo_outline
19complement(2620429..2621376)PHAGE_Entero_Mu_NC_000929: DNA transposition protein; NCTC9657_02763; phage(gi9633513)0.0Showinfo_outline
20complement(2621413..2623506)PROPHAGE_Escher_Sakai: phage transposase; NCTC9657_02764; phage(gi15834199)0.0Showinfo_outline
21complement(2623509..2623733)PHAGE_Entero_Mu_NC_000929: DNA binding protein ner; NCTC9657_02765; phage(gi9633495)1.18e-20Showinfo_outline

Region 6, total 49 CDS

#CDS PositionBLAST HitE-ValueSequence
1complement(2863728..2864297)Bacteriophage CI repressor helix-turn-helix domain; NCTC9657_029900.0Showinfo_outline
2complement(2864444..2864617)Uncharacterised protein; NCTC9657_029910.0Showinfo_outline
32864716..2866761PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: transposase; NCTC9657_02992; phage(gi971741504)4.57e-163Showinfo_outline
42866771..2867664PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: DNA transposition protein B; NCTC9657_02993; phage(gi971741505)3.19e-87Showinfo_outline
52867673..2867888Uncharacterised protein; NCTC9657_029940.0Showinfo_outline
62867908..2868141Uncharacterised protein; NCTC9657_029950.0Showinfo_outline
72868327..2868965PHAGE_Pseudo_B3_NC_006548: hypothetical protein; NCTC9657_02996; phage(gi56692574)2.96e-84Showinfo_outline
82869396..2869932PHAGE_Entero_Mu_NC_000929: hypothetical protein; NCTC9657_02997; phage(gi9633502)1.02e-20Showinfo_outline
92869925..2870149Uncharacterised protein; NCTC9657_029980.0Showinfo_outline
102870146..2870685PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC9657_02999; phage(gi428782349)5.01e-67Showinfo_outline
112870663..2870827Uncharacterised protein; NCTC9657_030000.0Showinfo_outline
122870843..2871172PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; NCTC9657_03001; phage(gi169257281)2.52e-12Showinfo_outline
132871153..2871368Uncharacterised protein; NCTC9657_030020.0Showinfo_outline
142871428..2871904PHAGE_Pseudo_D3112_NC_005178: hypothetical protein; NCTC9657_03003; phage(gi38229130)1.96e-27Showinfo_outline
152871849..2872283PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: mor transcription activator family protein; NCTC9657_03004; phage(gi971741519)6.84e-22Showinfo_outline
162872283..2872735PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: hypothetical protein; NCTC9657_03005; phage(gi971741516)9.30e-10Showinfo_outline
172872816..2873469PHAGE_Entero_mEp390_NC_019721: lysin; NCTC9657_03006; phage(gi428782714)2.37e-49Showinfo_outline
182873451..2873699Protein of uncharacterised function (DUF2644); NCTC9657_030070.0Showinfo_outline
192873689..2874324Uncharacterised protein; NCTC9657_030080.0Showinfo_outline
202874321..2874566PHAGE_Pseudo_73_NC_007806: hypothetical protein ORF001; NCTC9657_03009; phage(gi148912829)4.87e-05Showinfo_outline
212874563..2874877Uncharacterised protein; NCTC9657_030100.0Showinfo_outline
222874879..2875379PHAGE_Pseudo_JBD24_NC_020203: hypothetical protein; NCTC9657_03011; phage(gi448245073)1.76e-64Showinfo_outline
232875372..2875581Uncharacterised protein; NCTC9657_030120.0Showinfo_outline
242875582..2875911PHAGE_Rhodob_RcapMu_NC_016165: hypothetical protein; NCTC9657_03013; phage(gi356870872)1.22e-39Showinfo_outline
252875915..2876274Uncharacterised protein; NCTC9657_030140.0Showinfo_outline
262876279..2877982PHAGE_Pseudo_D3112_NC_005178: hypothetical protein; NCTC9657_03015; phage(gi38229138)0.0Showinfo_outline
272877982..2879550PHAGE_Pseudo_MP29_NC_011613: portal protein; NCTC9657_03016; phage(gi215480002)2.12e-151Showinfo_outline
282879543..2880814PHAGE_Ralsto_RS138_NC_029107: virion morphogenesis protein; NCTC9657_03017; phage(gi985760940)2.76e-69Showinfo_outline
292880804..2881346PHAGE_Pseudo_vB_PaeS_PM105_NC_028667: putative virion morphogenesis protein; NCTC9657_03018; phage(gi966198713)1.21e-16Showinfo_outline
302881581..2882666PHAGE_Ralsto_RS138_NC_029107: Mu-like prophage I protein; NCTC9657_03019; phage(gi985760943)3.01e-59Showinfo_outline
312882659..2883054PHAGE_Pseudo_JBD25_NC_027992: hypothetical protein; NCTC9657_03020; phage(gi100037)1.75e-34Showinfo_outline
322883066..2883974PHAGE_Pseudo_LPB1_NC_027298: putative major head subunit protein; NCTC9657_03021; phage(gi848469613)5.94e-122Showinfo_outline
332883975..2884397Uncharacterised protein; NCTC9657_030220.0Showinfo_outline
342884410..2884838PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: hypothetical protein; NCTC9657_03023; phage(gi971741535)4.16e-22Showinfo_outline
352884835..2885494PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: hypothetical protein; NCTC9657_03024; phage(gi971741536)5.53e-27Showinfo_outline
362885475..2885672PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: hypothetical protein; NCTC9657_03025; phage(gi971741537)8.95e-10Showinfo_outline
372885672..2887090PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: tail sheath protein; NCTC9657_03026; phage(gi971741538)2.10e-132Showinfo_outline
382887104..2887478PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: tail tube protein; NCTC9657_03027; phage(gi971741539)1.36e-35Showinfo_outline
392887478..2887873Uncharacterised protein; NCTC9657_030280.0Showinfo_outline
402887870..2887986Uncharacterised protein; NCTC9657_030290.0Showinfo_outline
412887987..2890164PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: tail length tape measure protein; NCTC9657_03030; phage(gi971741542)1.33e-79Showinfo_outline
422890164..2891477PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: DNA circularization protein; NCTC9657_03031; phage(gi971741543)4.98e-45Showinfo_outline
432891461..2892699PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: tail protein P; NCTC9657_03032; phage(gi971741544)2.08e-80Showinfo_outline
442892683..2893264PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: baseplate assembly protein; NCTC9657_03033; phage(gi971741545)3.65e-47Showinfo_outline
452893330..2893686PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: hypothetical protein; NCTC9657_03034; phage(gi971741546)2.03e-36Showinfo_outline
462893686..2894747PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: baseplate J protein; NCTC9657_03035; phage(gi971741547)5.30e-105Showinfo_outline
472894744..2895400PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: tail protein; NCTC9657_03036; phage(gi971741548)5.64e-31Showinfo_outline
482895412..2896158PHAGE_Salmon_SEN5_NC_028701: tail fiber protein; NCTC9657_03037; phage(gi966201574)9.39e-50Showinfo_outline
492896774..2898537PHAGE_Rhodoc_ReqiPoco6_NC_023694: tail fiber protein; NCTC9657_03039; phage(gi593774716)1.13e-07Showinfo_outline

Region 7, total 9 CDS

#CDS PositionBLAST HitE-ValueSequence
13234764..3234776attL0.0Showinfo_outline
2complement(3238292..3239683)PHAGE_Gordon_ClubL_NC_030901: recombination endonuclease subunit; NCTC9657_03391; phage(gi100056)8.25e-41Showinfo_outline
33239842..3241308PHAGE_Staphy_42E_NC_007052: ORF012; NCTC9657_03392; phage(gi66395520)2.85e-35Showinfo_outline
43241376..3242953PHAGE_Halovi_HGTV_1_NC_021328: carbamoyl phosphate synthase small subunit; NCTC9657_03393; phage(gi509140368)8.01e-05Showinfo_outline
5complement(3243048..3243182)choline-sulfatase; NCTC9657_033940.0Showinfo_outline
6complement(3243329..3243706)PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; NCTC9657_03395; phage(gi557307573)1.94e-82Showinfo_outline
7complement(3244191..3245399)PROPHAGE_Escher_CFT073: transposase; NCTC9657_03396; phage(gi26246249)0.0Showinfo_outline
8complement(3245544..3246809)PROPHAGE_Escher_CFT073: prophage P4 integrase; NCTC9657_03397; phage(gi26251024)0.0Showinfo_outline
93247037..3247049attR0.0Showinfo_outline

Region 8, total 51 CDS

#CDS PositionBLAST HitE-ValueSequence
14508028..4508069attL0.0Showinfo_outline
2complement(4509024..4510031)PHAGE_Entero_186_NC_001317: Int; NCTC9657_04693; phage(gi9634085)0.0Showinfo_outline
3complement(4510031..4510606)PHAGE_Entero_186_NC_001317: CI repressor; NCTC9657_04694; phage(gi9634086)2.29e-96Showinfo_outline
44510736..4510999PHAGE_Entero_186_NC_001317: Apl; NCTC9657_04695; phage(gi9634087)9.44e-59Showinfo_outline
54511030..4511539PHAGE_Entero_186_NC_001317: CII; NCTC9657_04696; phage(gi9634088)3.99e-120Showinfo_outline
64511547..4511747PHAGE_Entero_186_NC_001317: Fil; NCTC9657_04697; phage(gi9634089)1.30e-22Showinfo_outline
74511711..4512049PHAGE_Salmon_RE_2010_NC_019488: hypothetical protein; NCTC9657_04698; phage(gi418489688)1.89e-50Showinfo_outline
84512117..4512344PHAGE_Entero_186_NC_001317: Orf79; NCTC9657_04699; phage(gi9634091)3.16e-22Showinfo_outline
94512344..4512565PHAGE_Entero_186_NC_001317: Orf80; NCTC9657_04700; phage(gi9634092)6.25e-35Showinfo_outline
104512660..4514783PHAGE_Entero_186_NC_001317: A protein; NCTC9657_04701; phage(gi9634096)0.0Showinfo_outline
114514900..4515094PHAGE_Entero_186_NC_001317: Tum; NCTC9657_04702; phage(gi9634097)6.68e-28Showinfo_outline
124515231..4516169PHAGE_Entero_WPhi_NC_005056: Mth; NCTC9657_04703; phage(gi33438939)0.0Showinfo_outline
13complement(4516171..4517100)PHAGE_Entero_WPhi_NC_005056: gp96; NCTC9657_04704; phage(gi33438940)1.50e-119Showinfo_outline
14complement(4517100..4518179)PHAGE_Entero_WPhi_NC_005056: gp98; NCTC9657_04705; phage(gi33438941)7.00e-162Showinfo_outline
15complement(4518565..4519608)PHAGE_Entero_P2_NC_001895: portal vertex protein; NCTC9657_04706; phage(gi9630328)0.0Showinfo_outline
16complement(4519605..4520282)PHAGE_Entero_186_NC_001317: W protein; NCTC9657_04707; phage(gi9634057)5.23e-27Showinfo_outline
17complement(4520282..4522051)PHAGE_Entero_WPhi_NC_005056: gpP; NCTC9657_04708; phage(gi33438899)0.0Showinfo_outline
184522217..4523071PHAGE_Escher_pro483_NC_028943: capsid scaffolding protein; NCTC9657_04709; phage(gi971758515)2.92e-171Showinfo_outline
194523145..4524203PHAGE_Entero_186_NC_001317: major capsid protein; NCTC9657_04710; phage(gi9634060)0.0Showinfo_outline
204524207..4524950PHAGE_Escher_pro147_NC_028896: terminase; NCTC9657_04711; phage(gi971753743)2.54e-129Showinfo_outline
214525047..4525553PHAGE_Entero_fiAA91_ss_NC_022750: capsid completion protein; NCTC9657_04712; phage(gi557307591)3.33e-96Showinfo_outline
224525553..4525756PHAGE_Salmon_SP_004_NC_021774: phage tail protein; NCTC9657_04713; phage(gi526003620)2.92e-34Showinfo_outline
234525761..4526051PHAGE_Entero_186_NC_001317: holin; NCTC9657_04714; phage(gi9634064)2.24e-46Showinfo_outline
244526038..4526535PHAGE_Escher_pro483_NC_028943: lysin; NCTC9657_04715; phage(gi971758521)5.29e-103Showinfo_outline
254526532..4526963PHAGE_Entero_186_NC_001317: Orf27; NCTC9657_04716; phage(gi9634066)2.24e-60Showinfo_outline
264527059..4527526PHAGE_Entero_fiAA91_ss_NC_022750: tail completion protein; NCTC9657_04717; phage(gi557307596)2.22e-82Showinfo_outline
274527519..4527974PHAGE_Entero_186_NC_001317: O protein; NCTC9657_04718; phage(gi9634069)2.19e-64Showinfo_outline
284527990..4528607Uncharacterised protein; NCTC9657_047190.0Showinfo_outline
294528815..4529456PHAGE_Entero_186_NC_001317: baseplate protein; NCTC9657_04720; phage(gi9634070)1.16e-117Showinfo_outline
304529453..4529800PHAGE_Yersin_L_413C_NC_004745: baseplate wedge subunit; NCTC9657_04721; phage(gi30065719)6.75e-62Showinfo_outline
314529805..4530713PHAGE_Entero_186_NC_001317: baseplate; NCTC9657_04722; phage(gi9634072)9.99e-150Showinfo_outline
324530706..4531308PHAGE_Salmon_Fels_2_NC_010463: P2 gpI-like baseplate assembly protein; NCTC9657_04723; phage(gi169936031)2.31e-69Showinfo_outline
334531311..4533407PHAGE_Burkho_BcepMu_NC_005882: gp52; NCTC9657_04724; phage(gi48696962)1.22e-06Showinfo_outline
344533410..4534168Uncharacterised protein; NCTC9657_047250.0Showinfo_outline
354534183..4534788PHAGE_Entero_186_NC_001317: tail fiber protein H; NCTC9657_04726; phage(gi9634074)3.19e-33Showinfo_outline
364534754..4535233PHAGE_Erwini_phiEt88_NC_015295: putative tail fiber protein; NCTC9657_04727; phage(gi327198586)1.04e-14Showinfo_outline
374535366..4536547PHAGE_Entero_fiAA91_ss_NC_022750: major tail sheath; NCTC9657_04728; phage(gi557307603)0.0Showinfo_outline
384536561..4537076PHAGE_Escher_pro483_NC_028943: major tail tube protein; NCTC9657_04729; phage(gi971758537)1.74e-91Showinfo_outline
394537137..4537412PHAGE_Escher_pro483_NC_028943: tail protein; NCTC9657_04730; phage(gi971758538)9.86e-45Showinfo_outline
404537557..4539995PHAGE_Entero_fiAA91_ss_NC_022750: tail length determinator; NCTC9657_04731; phage(gi557307606)0.0Showinfo_outline
414540012..4540491PHAGE_Escher_pro147_NC_028896: tail protein; NCTC9657_04732; phage(gi971753720)3.28e-93Showinfo_outline
424540491..4541651PHAGE_Entero_P2_NC_001895: tail protein; NCTC9657_04733; phage(gi9630355)0.0Showinfo_outline
43complement(4541692..4542099)PHAGE_Salmon_SP_004_NC_021774: hypothetical protein; NCTC9657_04734; phage(gi526003640)2.53e-35Showinfo_outline
444542193..4542411PHAGE_Entero_186_NC_001317: B protein; NCTC9657_04735; phage(gi9634083)3.26e-44Showinfo_outline
45complement(4542569..4542644)tRNA0.0Showinfo_outline
464542573..4542614attR0.0Showinfo_outline
474542769..4543275G:T/U mismatch-specific uracil/thymine DNA-glycosylase; NCTC9657_047370.0Showinfo_outline
48complement(4543375..4545210)PHAGE_Synech_S_CBS3_NC_015465: group 2 RNA polymerase sigma factor; NCTC9657_04738; phage(gi331028036)4.03e-37Showinfo_outline
49complement(4545429..4547174)PHAGE_Helico_phiHP33_NC_016568: DNA primase; NCTC9657_04739; phage(gi371671350)1.20e-51Showinfo_outline
50complement(4547286..4547501)PHAGE_Pelagi_HTVC008M_NC_020484: 30S ribosomal protein S21; NCTC9657_04740; phage(gi460042545)5.26e-05Showinfo_outline
514547739..4548749PROPHAGE_Escher_MG1655: glycation-binding protein, predicted protease/chaperone; essential for genome maintenance; NCTC9657_04741; phage(gi16130960)0.0Showinfo_outline

Region 9, total 47 CDS

#CDS PositionBLAST HitE-ValueSequence
15012311..5012324attL0.0Showinfo_outline
2complement(5015673..5016473)PHAGE_Pseudo_MP22_NC_009818: hypothetical protein; NCTC9657_05210; phage(gi157835010)7.91e-42Showinfo_outline
3complement(5016485..5018770)PHAGE_Burkho_BcepNazgul_NC_005091: conserved tail assembly protein; NCTC9657_05211; phage(gi34610151)0.0Showinfo_outline
4complement(5018770..5018973)PHAGE_Pseudo_PaMx28_NC_028931: hypothetical protein; NCTC9657_05212; phage(gi971757100)1.58e-14Showinfo_outline
5complement(5018984..5019217)PHAGE_Entero_Enc34_NC_019524: tail assembly protein; NCTC9657_05213; phage(gi422936757)2.75e-22Showinfo_outline
6complement(5019228..5020043)PHAGE_Provid_Redjac_NC_018832: conserved tail assembly protein; NCTC9657_05214; phage(gi410490763)2.41e-62Showinfo_outline
7complement(5020030..5021205)PHAGE_Pseudo_H70_NC_027384: virion structural protein; NCTC9657_05215; phage(gi849255424)1.90e-73Showinfo_outline
8complement(5021202..5024918)PHAGE_Pseudo_MP22_NC_009818: putative tail component protein; NCTC9657_05216; phage(gi157835013)3.68e-55Showinfo_outline
9complement(5025118..5025591)PHAGE_Pseudo_MP38_NC_011611: hypothetical protein gpG; NCTC9657_05217; phage(gi215479975)3.48e-32Showinfo_outline
10complement(5025591..5026337)PHAGE_Ralsto_RS138_NC_029107: hypothetical protein; NCTC9657_05218; phage(gi985760950)7.53e-67Showinfo_outline
11complement(5026334..5026531)Uncharacterised protein; NCTC9657_052190.0Showinfo_outline
12complement(5026531..5026995)PHAGE_Pseudo_D3112_NC_005178: hypothetical protein; NCTC9657_05220; phage(gi38229151)1.03e-34Showinfo_outline
13complement(5026989..5027411)PHAGE_Ralsto_RS138_NC_029107: hypothetical protein; NCTC9657_05221; phage(gi985760947)5.26e-41Showinfo_outline
14complement(5027414..5027902)Uncharacterised protein; NCTC9657_052220.0Showinfo_outline
15complement(5027962..5028888)PHAGE_Pseudo_MP22_NC_009818: hypothetical protein; NCTC9657_05223; phage(gi157835004)3.77e-133Showinfo_outline
16complement(5028888..5030024)PHAGE_Pseudo_JBD24_NC_020203: hypothetical protein; NCTC9657_05224; phage(gi448245084)1.28e-88Showinfo_outline
17complement(5030232..5030813)PHAGE_Pseudo_MP22_NC_009818: virion morphogenesis protein; NCTC9657_05225; phage(gi157835000)1.07e-21Showinfo_outline
18complement(5030813..5032048)PHAGE_Ralsto_RS138_NC_029107: virion morphogenesis protein; NCTC9657_05226; phage(gi985760940)7.96e-72Showinfo_outline
19complement(5032048..5033568)PHAGE_Pseudo_LPB1_NC_027298: putative portal protein; NCTC9657_05227; phage(gi848469605)9.02e-154Showinfo_outline
20complement(5033562..5035346)PHAGE_Ralsto_RS138_NC_029107: hypothetical protein; NCTC9657_05228; phage(gi985760938)0.0Showinfo_outline
21complement(5035355..5035576)Uncharacterised protein; NCTC9657_052290.0Showinfo_outline
22complement(5035569..5036072)PHAGE_Pseudo_MP22_NC_009818: hypothetical protein; NCTC9657_05230; phage(gi157834996)2.85e-60Showinfo_outline
23complement(5036072..5036299)Uncharacterised protein; NCTC9657_052310.0Showinfo_outline
24complement(5036302..5036550)Uncharacterised protein; NCTC9657_052320.0Showinfo_outline
25complement(5036547..5037167)Uncharacterised protein; NCTC9657_052330.0Showinfo_outline
26complement(5037139..5037423)Uncharacterised protein; NCTC9657_052340.0Showinfo_outline
27complement(5037411..5038061)PHAGE_Pseudo_MD8_NC_031091: prohead core protein protease; NCTC9657_05235; phage(gi100061)1.84e-49Showinfo_outline
28complement(5038162..5038611)PHAGE_Pseudo_MP22_NC_009818: putative integral membrane protein; NCTC9657_05236; phage(gi157834989)1.74e-14Showinfo_outline
29complement(5038608..5039030)PHAGE_Pseudo_D3112_NC_005178: hypothetical protein; NCTC9657_05237; phage(gi38229130)9.12e-25Showinfo_outline
30complement(5039027..5039224)Uncharacterised protein; NCTC9657_052380.0Showinfo_outline
31complement(5039196..5039444)Uncharacterised protein; NCTC9657_052390.0Showinfo_outline
32complement(5039441..5040166)PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; NCTC9657_05240; phage(gi557307558)4.59e-73Showinfo_outline
33complement(5040622..5040795)Uncharacterised protein; NCTC9657_052410.0Showinfo_outline
34complement(5040792..5041022)Uncharacterised protein; NCTC9657_052420.0Showinfo_outline
355041578..5041955PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; NCTC9657_05243; phage(gi557307573)1.10e-82Showinfo_outline
36complement(5042393..5042524)Uncharacterised protein; NCTC9657_052440.0Showinfo_outline
37complement(5042802..5043017)PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: hypothetical protein; NCTC9657_05245; phage(gi971741508)2.51e-19Showinfo_outline
38complement(5043149..5043433)PHAGE_Burkho_BcepMu_NC_005882: gp05; NCTC9657_05246; phage(gi48696915)7.55e-11Showinfo_outline
39complement(5043472..5043708)Uncharacterised protein; NCTC9657_052470.0Showinfo_outline
40complement(5043708..5043980)Uncharacterised protein; NCTC9657_052480.0Showinfo_outline
41complement(5043996..5044892)PHAGE_Haemop_SuMu_NC_019455: phage transposase; NCTC9657_05249; phage(gi418489040)5.15e-73Showinfo_outline
42complement(5044905..5045561)PROPHAGE_Escher_Sakai: phage transposase; NCTC9657_05250; phage(gi15834199)2.15e-55Showinfo_outline
43complement(5045656..5046672)PROPHAGE_Escher_Sakai: phage transposase; NCTC9657_05251; phage(gi15834199)5.66e-99Showinfo_outline
44complement(5046987..5047343)PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; NCTC9657_05252; phage(gi557307573)2.54e-66Showinfo_outline
455048207..5048998PHAGE_Pseudo_MP22_NC_009818: c repressor; NCTC9657_05253; phage(gi157834973)2.07e-15Showinfo_outline
465049240..5049253attR0.0Showinfo_outline
475049258..5049893PROPHAGE_Salmon_CT18: phage integrase; NCTC9657_05254; phage(gi16763128)3.27e-62Showinfo_outline
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Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)

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Length: 5240444 bps
Phages: 9
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Lysis
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Fiber Protein
Plate Protein
tRNA

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