Submission Results

Sequence Name: Not Available

GenBank Accession Number: UGMK00000000.1

GenInfo (GI) Number: 0000000000

Download Results: UGMK00000000.1.PHASTER.zip

gi|00000000|ref|UGMK00000000.1| Klebsiella pneumoniae strain NCTC9181, whole genome shotgun 5543559, gc%: 57.38%

Download summary as .txt file: summary.txt file_download

Total: 5 prophage regions have been identified, of which 3 regions are intact, 2 regions are incomplete, and 0 regions are questionable.

RegionRegion LengthCompletenessScore# Total ProteinsRegion PositionMost Common PhageGC %Details
124.7Kbintact10020129531-154258 info_outlinePHAGE_Stx2_c_1717_NC_011357(2)56.20%Show info_outline
237.3Kbintact120331572657-1609986 info_outlinePHAGE_Klebsi_phiKO2_NC_005857(21)52.91%Show info_outline
352.3Kbintact140722352762-2405160 info_outlinePHAGE_Edward_GF_2_NC_026611(19)52.20%Show info_outline
410.6Kbincomplete40124382785-4393439 info_outlinePHAGE_Entero_N15_NC_001901(3)49.08%Show info_outline
520.7Kbincomplete20215516595-5537303 info_outlinePHAGE_Salmon_SSU5_NC_018843(3)55.60%Show info_outline
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Region: The number assigned to the region.
Region Length: The length of the sequence of that region (in bp).
Completeness: A prediction of whether the region contains a intact or incomplete prophage based on the above criteria.
Score: The score of the region based on the above criteria.
# Total Proteins: The number of ORFs present in the region.
Region Position: The start and end positions of the region on the bacterial chromosome.
Most Common Phage: The phage(s) with the highest number of proteins most similar to those in the region.
GC %: The percentage of GC nucleotides of the region.

Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:

  1. If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
Method 2:
  1. If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
Method 3:
  1. If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
  2. If the size of the region is greater than 30 Kb, the score will be increased by 10.
  3. If there are at least 40 proteins in the region, the score will be increased by 10.
  4. If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
Compared the total score of method 2 with the total score of method 3, the bigger one is chosen as the total score of the region.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.

gi|00000000|ref|UGMK00000000.1| Klebsiella pneumoniae strain NCTC9181, whole genome shotgun 5543559, gc%: 57.38%

Download details as .txt file: detail.txt file_download

Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File

Region 1, total 22 CDS

#CDS PositionBLAST HitE-ValueSequence
1129531..129542attL0.0Showinfo_outline
2complement(135034..136713)PROPHAGE_Brucel_1330: transposase, putative; NCTC9181_00141; phage(gi23501616)6.40e-35Showinfo_outline
3complement(136883..137095)Domain of uncharacterised function (DUF3330); NCTC9181_001420.0Showinfo_outline
4complement(137161..137397)MerE; NCTC9181_001430.0Showinfo_outline
5complement(137394..137759)MerD; NCTC9181_001440.0Showinfo_outline
6complement(137777..139462)MerA; NCTC9181_001450.0Showinfo_outline
7complement(139501..139926)MerC; NCTC9181_001460.0Showinfo_outline
8complement(139954..140229)MerP; NCTC9181_001470.0Showinfo_outline
9complement(140245..140610)MerT; NCTC9181_001480.0Showinfo_outline
10140682..141137MerR family transcriptional regulator; NCTC9181_001490.0Showinfo_outline
11complement(141223..141924)PROPHAGE_Shigel_301: insertion element IS2 transposase InsD; NCTC9181_00150; phage(gi24111655)6.51e-136Showinfo_outline
12complement(141972..142337)PROPHAGE_Escher_CFT073: transposase insC; NCTC9181_00151; phage(gi26249447)3.99e-57Showinfo_outline
13143086..144474PHAGE_Erwini_vB_EamM_Asesino_NC_031107: chaperone for long tail fiber formation; NCTC9181_00152; phage(gi100168)9.30e-05Showinfo_outline
14144867..145580PHAGE_Campyl_CP21_NC_019507: radical SAM domain-containing protein; NCTC9181_00153; phage(gi422935302)3.53e-07Showinfo_outline
15145577..146212His-Xaa-Ser repeat protein HxsA; NCTC9181_001540.0Showinfo_outline
16147143..147490PHAGE_Stx2_c_1717_NC_011357: transposase; NCTC9181_00155; phage(gi209447152)8.81e-76Showinfo_outline
17147540..147887PHAGE_Stx2_c_1717_NC_011357: transposase; NCTC9181_00156; phage(gi209447153)2.47e-64Showinfo_outline
18149063..149725PHAGE_Stx2_c_1717_NC_011357: transposase; NCTC9181_00158; phage(gi209447153)1.53e-116Showinfo_outline
19149668..150288PHAGE_Stx2_c_1717_NC_011357: transposase; NCTC9181_00159; phage(gi209447153)3.39e-130Showinfo_outline
20150356..150703PHAGE_Stx2_c_1717_NC_011357: transposase; NCTC9181_00160; phage(gi209447153)1.02e-67Showinfo_outline
21152132..152143attR0.0Showinfo_outline
22complement(152525..154258)PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; NCTC9181_00161; phage(gi371496158)1.53e-19Showinfo_outline

Region 2, total 33 CDS

#CDS PositionBLAST HitE-ValueSequence
1complement(1572657..1574153)PHAGE_Klebsi_Sushi_NC_028774: tail fiber; NCTC9181_01567; phage(gi971742192)4.98e-22Showinfo_outline
2complement(1574222..1585579)PHAGE_Klebsi_phiKO2_NC_005857: Gp21; NCTC9181_01568; phage(gi46402107)0.0Showinfo_outline
3complement(1585619..1586170)PHAGE_Klebsi_phiKO2_NC_005857: Gp20; NCTC9181_01569; phage(gi46402106)6.98e-88Showinfo_outline
4complement(1586247..1586597)PHAGE_Entero_HK140_NC_019710: hypothetical protein; NCTC9181_01570; phage(gi428781958)1.00e-15Showinfo_outline
5complement(1586629..1587339)PHAGE_Klebsi_phiKO2_NC_005857: Gp18; NCTC9181_01571; phage(gi46402104)5.23e-165Showinfo_outline
6complement(1587341..1588096)PHAGE_Klebsi_phiKO2_NC_005857: Gp17; NCTC9181_01572; phage(gi46402103)2.27e-158Showinfo_outline
7complement(1588093..1588431)PHAGE_Klebsi_phiKO2_NC_005857: Gp16; NCTC9181_01573; phage(gi46402102)1.68e-72Showinfo_outline
8complement(1588431..1591766)PHAGE_Klebsi_phiKO2_NC_005857: putative tapemeasure protein; NCTC9181_01574; phage(gi46402101)0.0Showinfo_outline
9complement(1591999..1592364)PHAGE_Klebsi_phiKO2_NC_005857: putative tail assembly chaperone; NCTC9181_01575; phage(gi46402099)8.81e-73Showinfo_outline
10complement(1592422..1592883)PHAGE_Klebsi_phiKO2_NC_005857: major tail shaft subunit; NCTC9181_01576; phage(gi46402098)2.21e-88Showinfo_outline
11complement(1592915..1593316)PHAGE_Klebsi_phiKO2_NC_005857: Gp11; NCTC9181_01577; phage(gi46402097)1.15e-87Showinfo_outline
12complement(1593313..1593702)PHAGE_Klebsi_phiKO2_NC_005857: Gp10; NCTC9181_01578; phage(gi46402096)5.13e-78Showinfo_outline
13complement(1593683..1594021)PHAGE_Klebsi_phiKO2_NC_005857: Gp9; NCTC9181_01579; phage(gi46402095)8.25e-72Showinfo_outline
14complement(1594018..1594335)PHAGE_Klebsi_phiKO2_NC_005857: Gp8; NCTC9181_01580; phage(gi46402094)1.50e-62Showinfo_outline
15complement(1594316..1594576)PHAGE_Klebsi_phiKO2_NC_005857: Gp7; NCTC9181_01581; phage(gi46402093)3.14e-31Showinfo_outline
16complement(1594635..1595921)PHAGE_Klebsi_phiKO2_NC_005857: major capsid head protein precursor; NCTC9181_01582; phage(gi46402092)0.0Showinfo_outline
17complement(1595999..1596919)PHAGE_Klebsi_phiKO2_NC_005857: putative head maturation protease; NCTC9181_01583; phage(gi46402091)0.0Showinfo_outline
18complement(1596956..1598215)PHAGE_Klebsi_phiKO2_NC_005857: putative portal protein; NCTC9181_01584; phage(gi46402090)0.0Showinfo_outline
19complement(1598388..1600109)PHAGE_Klebsi_phiKO2_NC_005857: putative large terminase subunit; NCTC9181_01585; phage(gi46402088)0.0Showinfo_outline
20complement(1600109..1600543)PHAGE_Klebsi_phiKO2_NC_005857: putative small terminase subunit; NCTC9181_01586; phage(gi46402087)1.63e-31Showinfo_outline
21complement(1600792..1601223)PHAGE_Klebsi_phiKO2_NC_005857: Gp62; NCTC9181_01587; phage(gi46402148)3.01e-56Showinfo_outline
22complement(1601213..1601536)PHAGE_Klebsi_phiKO2_NC_005857: Gp61; NCTC9181_01588; phage(gi46402147)4.53e-07Showinfo_outline
23complement(1601834..1602040)Uncharacterised protein; NCTC9181_015890.0Showinfo_outline
24complement(1602076..1602588)PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; NCTC9181_01590; phage(gi16765210)8.38e-69Showinfo_outline
25complement(1602585..1603115)PHAGE_Escher_TL_2011c_NC_019442: lysozyme; NCTC9181_01591; phage(gi418487070)6.22e-107Showinfo_outline
26complement(1603093..1603329)PHAGE_Entero_mEp460_NC_019716: porin; NCTC9181_01592; phage(gi428782370)1.67e-36Showinfo_outline
27complement(1603485..1603892)PHAGE_Cronob_ENT39118_NC_019934: hypothetical protein; NCTC9181_01593; phage(gi431811073)4.37e-73Showinfo_outline
281604479..1605636PHAGE_Klebsi_Matisse_NC_028750: baseplate wedge subunit; NCTC9181_01594; phage(gi100179)8.76e-08Showinfo_outline
29complement(1606355..1607338)PHAGE_Lactoc_lato_NC_004746: putative methylase; NCTC9181_01595; phage(gi30089875)1.24e-17Showinfo_outline
30complement(1608062..1608664)PHAGE_Entero_SfV_NC_003444: hypothetical protein; NCTC9181_01596; phage(gi19549032)8.33e-45Showinfo_outline
31complement(1609018..1609410)PHAGE_Shigel_SfIV_NC_022749: regulation protein; NCTC9181_01597; phage(gi557307569)1.12e-18Showinfo_outline
32complement(1609451..1609708)PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; NCTC9181_01598; phage(gi423262436)2.21e-23Showinfo_outline
33complement(1609753..1609986)PHAGE_Entero_mEp237_NC_019704: hypothetical protein; NCTC9181_01599; phage(gi435439313)1.89e-34Showinfo_outline

Region 3, total 74 CDS

#CDS PositionBLAST HitE-ValueSequence
12352762..2352773attL0.0Showinfo_outline
2complement(2355758..2356075)PHAGE_Entero_mEp390_NC_019721: hypothetical protein; NCTC9181_02290; phage(gi428782690)2.47e-31Showinfo_outline
3complement(2356075..2356314)PHAGE_Entero_HK225_NC_019717: hypothetical protein; NCTC9181_02291; phage(gi428782404)9.16e-22Showinfo_outline
4complement(2356397..2357200)Uncharacterised protein; NCTC9181_022920.0Showinfo_outline
5complement(2357203..2359743)PHAGE_Burkho_KS10_NC_011216: hypothetical protein; NCTC9181_02293; phage(gi198449310)1.36e-65Showinfo_outline
6complement(2359758..2361053)PHAGE_Burkho_BcepNY3_NC_009604: tail fiber protein; NCTC9181_02294; phage(gi149882931)3.26e-31Showinfo_outline
7complement(2361055..2361642)PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC9181_02295; phage(gi764162277)3.16e-43Showinfo_outline
8complement(2361635..2362867)PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC9181_02296; phage(gi764162276)4.40e-133Showinfo_outline
9complement(2362875..2363231)PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC9181_02297; phage(gi764162275)9.28e-23Showinfo_outline
10complement(2363299..2364366)PHAGE_Stx2_c_1717_NC_011357: phage antirepressor protein; NCTC9181_02298; phage(gi209447193)1.10e-114Showinfo_outline
11complement(2364344..2364520)PHAGE_Edward_GF_2_NC_026611: putative regulator protein Arc-like DNA binding domain; NCTC9181_02299; phage(gi764162269)7.96e-07Showinfo_outline
122364636..2364998PHAGE_Edward_GF_2_NC_026611: putative regulator protein Arc-like DNA binding domain; NCTC9181_02300; phage(gi764162268)6.13e-12Showinfo_outline
132365019..2365222Uncharacterised protein; NCTC9181_023010.0Showinfo_outline
14complement(2365641..2366231)PHAGE_Edward_GF_2_NC_026611: putative baseplate protein; NCTC9181_02302; phage(gi764162274)1.67e-25Showinfo_outline
15complement(2366233..2367087)PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC9181_02303; phage(gi764162273)2.28e-35Showinfo_outline
16complement(2367084..2367389)PHAGE_Edward_GF_2_NC_026611: putative structural protein; NCTC9181_02304; phage(gi764162272)7.32e-27Showinfo_outline
17complement(2367505..2368386)PROPHAGE_Escher_CFT073: insertion element IS2 transposase InsD; NCTC9181_02305; phage(gi26249446)3.71e-129Showinfo_outline
18complement(2368344..2368739)PROPHAGE_Escher_CFT073: transposase insC; NCTC9181_02306; phage(gi26251004)4.17e-56Showinfo_outline
19complement(2368788..2369585)PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC9181_02307; phage(gi764162271)4.83e-37Showinfo_outline
20complement(2369589..2371505)PHAGE_Salmon_SEN34_NC_028699: tail tape measure protein; NCTC9181_02308; phage(gi966201433)7.18e-49Showinfo_outline
21complement(2371710..2372186)PHAGE_Acinet_LZ35_NC_031117: hypothetical protein; NCTC9181_02309; phage(gi100019)1.09e-10Showinfo_outline
22complement(2372238..2372492)PHAGE_Entero_mEp235_NC_019708: hypothetical protein; NCTC9181_02310; phage(gi428781870)9.22e-29Showinfo_outline
23complement(2372495..2373250)PHAGE_Entero_mEpX1_NC_019709: hypothetical protein; NCTC9181_02311; phage(gi428781933)4.67e-76Showinfo_outline
24complement(2373432..2373875)PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC9181_02312; phage(gi764162262)1.99e-22Showinfo_outline
25complement(2373875..2375356)PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC9181_02313; phage(gi764162261)1.20e-115Showinfo_outline
26complement(2375360..2375911)PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC9181_02314; phage(gi764162260)1.01e-18Showinfo_outline
27complement(2375893..2376261)PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC9181_02315; phage(gi764162259)3.02e-28Showinfo_outline
28complement(2376258..2376821)PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC9181_02316; phage(gi764162258)5.45e-21Showinfo_outline
29complement(2376824..2377267)PHAGE_Aeromo_vB_AsaM_56_NC_019527: hypothetical protein; NCTC9181_02317; phage(gi422937544)1.82e-27Showinfo_outline
30complement(2377267..2377593)PHAGE_Aeromo_vB_AsaM_56_NC_019527: hypothetical protein; NCTC9181_02318; phage(gi422937543)7.30e-16Showinfo_outline
31complement(2377595..2378632)PHAGE_Burkho_BcepNY3_NC_009604: major capsid protein; NCTC9181_02319; phage(gi149882911)3.97e-100Showinfo_outline
32complement(2378632..2379114)PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC9181_02320; phage(gi764162254)1.11e-37Showinfo_outline
33complement(2379116..2380285)PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC9181_02321; phage(gi764162253)5.50e-56Showinfo_outline
34complement(2380289..2380987)PHAGE_Edward_GF_2_NC_026611: putative head protein; NCTC9181_02322; phage(gi764162251)3.57e-70Showinfo_outline
35complement(2381040..2382560)PHAGE_Aeromo_vB_AsaM_56_NC_019527: putative portal protein; NCTC9181_02323; phage(gi422937534)2.51e-125Showinfo_outline
36complement(2382561..2384237)PHAGE_Pectob_ZF40_NC_019522: putative TerL large-subunit terminase; NCTC9181_02324; phage(gi422936681)0.0Showinfo_outline
37complement(2384239..2384724)PHAGE_Pectob_ZF40_NC_019522: hypothetical protein; NCTC9181_02325; phage(gi422936680)9.40e-93Showinfo_outline
38complement(2384756..2385391)PHAGE_Pectob_ZF40_NC_019522: putative transposase; NCTC9181_02326; phage(gi422936679)8.92e-117Showinfo_outline
39complement(2385513..2385656)Uncharacterised protein; NCTC9181_023270.0Showinfo_outline
40complement(2385717..2386331)Uncharacterised protein; NCTC9181_023280.0Showinfo_outline
41complement(2386469..2386792)PHAGE_Entero_SfV_NC_003444: putative Rz1 lytic protein; NCTC9181_02329; phage(gi19549039)9.99e-47Showinfo_outline
42complement(2386997..2387527)PHAGE_Escher_TL_2011c_NC_019442: lysozyme; NCTC9181_02330; phage(gi418487070)5.60e-102Showinfo_outline
43complement(2387530..2387778)PHAGE_Entero_phi80_NC_021190: holin; NCTC9181_02331; phage(gi824479635)5.22e-09Showinfo_outline
44complement(2387808..2388059)Uncharacterised protein; NCTC9181_023320.0Showinfo_outline
45complement(2388739..2389428)PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage antiterminator protein Q; NCTC9181_02333; phage(gi169257244)1.50e-88Showinfo_outline
46complement(2389425..2389565)PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; NCTC9181_02334; phage(gi169257245)1.08e-10Showinfo_outline
47complement(2389562..2389924)PHAGE_Entero_mEp237_NC_019704: Holliday junction resolvase RusA; NCTC9181_02335; phage(gi435439318)1.91e-69Showinfo_outline
48complement(2389921..2390211)PHAGE_Entero_mEp237_NC_019704: hypothetical protein; NCTC9181_02336; phage(gi435439317)4.34e-59Showinfo_outline
49complement(2390204..2390380)PHAGE_Escher_HK639_NC_016158: NinE; NCTC9181_02337; phage(gi356870663)1.95e-15Showinfo_outline
50complement(2390380..2390976)PHAGE_Entero_mEp237_NC_019704: hypothetical protein; NCTC9181_02338; phage(gi435439315)3.14e-61Showinfo_outline
51complement(2391134..2391322)PHAGE_Vibrio_pYD38_A_NC_021534: hypothetical protein; NCTC9181_02339; phage(gi514051003)1.91e-31Showinfo_outline
52complement(2391322..2391822)PHAGE_Stx2_c_86_NC_008464: hypothetical protein; NCTC9181_02340; phage(gi116222036)6.29e-18Showinfo_outline
53complement(2391819..2392355)PHAGE_Vibrio_pYD38_A_NC_021534: hypothetical protein; NCTC9181_02341; phage(gi514051012)1.49e-43Showinfo_outline
54complement(2392435..2392944)PHAGE_Edward_GF_2_NC_026611: hypothetical protein; NCTC9181_02342; phage(gi764162292)1.84e-11Showinfo_outline
55complement(2392941..2393243)PHAGE_Entero_P88_NC_026014: MarR family transcriptional regulator; NCTC9181_02343; phage(gi744692709)3.14e-05Showinfo_outline
56complement(2393243..2394673)PHAGE_Entero_HK022_NC_002166: gene P protein; NCTC9181_02344; phage(gi9634151)0.0Showinfo_outline
57complement(2394663..2395562)PHAGE_Escher_phage_NC_004913: O protein; NCTC9181_02345; phage(gi32170959)2.98e-109Showinfo_outline
58complement(2395555..2395701)Uncharacterised protein; NCTC9181_023460.0Showinfo_outline
59complement(2395787..2396008)PHAGE_Entero_mEp213_NC_019720: CII protein; NCTC9181_02347; phage(gi428782643)8.49e-10Showinfo_outline
60complement(2396048..2396275)PHAGE_Escher_HK75_NC_016160: regulatory protein cro; NCTC9181_02348; phage(gi356870715)1.81e-24Showinfo_outline
612396680..2397066PHAGE_Salmon_ST160_NC_014900: C2; NCTC9181_02349; phage(gi318065925)3.93e-83Showinfo_outline
622397089..2397208Uncharacterised protein; NCTC9181_023500.0Showinfo_outline
632397853..2397981Uncharacterised protein; NCTC9181_023510.0Showinfo_outline
642398797..2399081PHAGE_Escher_HK639_NC_016158: hypothetical protein; NCTC9181_02352; phage(gi356870640)2.42e-51Showinfo_outline
652399098..2399844PHAGE_Salmon_SEN34_NC_028699: recombinational DNA repair protein RecT (prophage associated); NCTC9181_02353; phage(gi966201455)1.34e-85Showinfo_outline
662399841..2400332PHAGE_Salmon_NR01_NC_031042: hypothetical protein; NCTC9181_02354; phage(gi100026)5.80e-26Showinfo_outline
672400313..2400933PHAGE_Pseudo_YMC11/02/R656_NC_028657: putative exonuclease; NCTC9181_02355; phage(gi966197818)2.45e-75Showinfo_outline
682400962..2402086PHAGE_Salmon_9NA_NC_025443: putative DNA methylase; NCTC9181_02356; phage(gi712914017)1.16e-106Showinfo_outline
692402083..2402304PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; NCTC9181_02357; phage(gi157165994)5.77e-09Showinfo_outline
702402301..2402501Uncharacterised protein; NCTC9181_023580.0Showinfo_outline
712402875..2403096PHAGE_Stx2_vB_EcoP_24B_NC_027984: putative C4 zinc finger protein; NCTC9181_02359; phage(gi937456240)2.68e-16Showinfo_outline
722403098..2403757PHAGE_Pseudo_201phi2_1_NC_010821: hypothetical protein; NCTC9181_02360; phage(gi189490194)1.03e-42Showinfo_outline
732403776..2403787attR0.0Showinfo_outline
742403997..2405160PHAGE_Edward_GF_2_NC_026611: putative integrase; NCTC9181_02361; phage(gi764162281)0.0Showinfo_outline

Region 4, total 14 CDS

#CDS PositionBLAST HitE-ValueSequence
14382785..4382831attL0.0Showinfo_outline
24383004..4384428PHAGE_Escher_HK75_NC_016160: phage integrase family protein; NCTC9181_04296; phage(gi356870702)1.89e-13Showinfo_outline
3complement(4385197..4385502)Uncharacterised protein; NCTC9181_042970.0Showinfo_outline
44385697..4386014Uncharacterised protein; NCTC9181_042980.0Showinfo_outline
54386007..4386210Uncharacterised protein; NCTC9181_042990.0Showinfo_outline
64386477..4386770Uncharacterised protein; NCTC9181_043000.0Showinfo_outline
74386767..4387174putative prophage protein; NCTC9181_043010.0Showinfo_outline
84387143..4388183PHAGE_Salico_CGphi29_NC_020844: hypothetical protein; NCTC9181_04302; phage(gi472340164)6.51e-33Showinfo_outline
94388543..4389475Uncharacterised protein; NCTC9181_043030.0Showinfo_outline
104389789..4390823PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage major capsid protein; Lambda gpE homolog; NCTC9181_04304; phage(gi169257230)1.23e-88Showinfo_outline
114390831..4391187PHAGE_Entero_HK225_NC_019717: head decoration protein D; NCTC9181_04305; phage(gi428782382)6.02e-12Showinfo_outline
124391200..4391637PHAGE_Entero_P4_NC_001609: transcriptional regulator; NCTC9181_04306; phage(gi9627517)5.85e-05Showinfo_outline
134391950..4392465PHAGE_Entero_N15_NC_001901: gp1; NCTC9181_04307; phage(gi9630465)5.60e-47Showinfo_outline
144393439..4393485attR0.0Showinfo_outline

Region 5, total 23 CDS

#CDS PositionBLAST HitE-ValueSequence
15516595..5516606attL0.0Showinfo_outline
25516761..5517555PHAGE_Gordon_Nymphadora_NC_031061: hypothetical protein; NCTC9181_05404; phage(gi100039)3.47e-07Showinfo_outline
3complement(5518377..5519003)PHAGE_Sodali_phiSG1_NC_007902: ParA-like protein; NCTC9181_05405; phage(gi89886027)1.89e-30Showinfo_outline
4complement(5519651..5520526)PHAGE_Entero_P1_NC_005856: RepA; NCTC9181_05406; phage(gi46401683)2.28e-110Showinfo_outline
5complement(5520938..5522209)PHAGE_Cronob_ENT39118_NC_019934: DNA polymerase; NCTC9181_05407; phage(gi431811050)0.0Showinfo_outline
6complement(5522209..5522640)PHAGE_Cronob_ENT39118_NC_019934: protein umuD; NCTC9181_05408; phage(gi431811072)2.31e-33Showinfo_outline
75523046..5524533PHAGE_Pseudo_phi3_NC_030940: hypothetical protein; NCTC9181_05410; phage(gi100001)2.31e-36Showinfo_outline
85524782..5525753PHAGE_Entero_P88_NC_026014: recombinase; NCTC9181_05411; phage(gi744692717)1.03e-75Showinfo_outline
95525756..5526427mediator of plasmid stability; NCTC9181_054120.0Showinfo_outline
105526491..5526721Uncharacterised protein; NCTC9181_054130.0Showinfo_outline
115527190..5527411PHAGE_Salmon_SSU5_NC_018843: hypothetical protein; NCTC9181_05414; phage(gi410491514)2.12e-05Showinfo_outline
125527408..5527743Uncharacterised protein; NCTC9181_054150.0Showinfo_outline
135528130..5528831PHAGE_Staphy_Stau2_NC_030933: hypothetical protein; NCTC9181_05416; phage(gi100063)3.58e-27Showinfo_outline
145528831..5529052PHAGE_Entero_N15_NC_001901: gp50; NCTC9181_05417; phage(gi9630517)6.40e-06Showinfo_outline
155529062..5529481Protein of uncharacterised function (DUF1380); NCTC9181_054180.0Showinfo_outline
165529535..5530302Uncharacterised protein; NCTC9181_054190.0Showinfo_outline
175530982..5531410PHAGE_Pseudo_YuA_NC_010116: hypothetical protein; NCTC9181_05420; phage(gi162135127)2.25e-12Showinfo_outline
185531455..5531961PHAGE_Rhodoc_CosmicSans_NC_028677: ArdA; NCTC9181_05421; phage(gi966199624)8.56e-13Showinfo_outline
195532549..5532869Uncharacterised protein; NCTC9181_054220.0Showinfo_outline
205533553..5534107PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; NCTC9181_05423; phage(gi100049)2.00e-62Showinfo_outline
215534156..5534404Bacterial protein of uncharacterised function (DUF905); NCTC9181_054240.0Showinfo_outline
225534473..5536473PHAGE_Gordon_Hedwig_NC_031099: RNA polymerase binding protein; NCTC9181_05425; phage(gi100054)1.38e-06Showinfo_outline
235537303..5537314attR0.0Showinfo_outline
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Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)

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Length: 5543559 bps
Phages: 5
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Lysis
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Fiber Protein
Plate Protein
tRNA

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