Submission Results

Sequence Name: Not Available

GenBank Accession Number: VJWC01000001.1

GenInfo (GI) Number: 0000000000

Download Results: VJWC01000001.1.PHASTER.zip

gi|00000000|ref|VJWC01000001.1| Bacillus sp. AK8 Ga0265716_11, whole genome shotgun sequence. 5493539, gc%: 35.25%

Download summary as .txt file: summary.txt file_download

Total: 6 prophage regions have been identified, of which 2 regions are intact, 4 regions are incomplete, and 0 regions are questionable.

RegionRegion LengthCompletenessScore# Total ProteinsRegion PositionMost Common PhageGC %Details
112.8Kbincomplete3016916315-929203 info_outlinePHAGE_Sphing_PAU_NC_019521(4)35.46%Show info_outline
261.8Kbintact140673093883-3155718 info_outlinePHAGE_Bacill_phIS3501_NC_019502(47)34.06%Show info_outline
343.1Kbincomplete50593202654-3245805 info_outlinePHAGE_Staphy_SpaA1_NC_018277(11)38.26%Show info_outline
452.6Kbintact140463471303-3523910 info_outlinePHAGE_Geobac_GBSV1_NC_008376(8)35.44%Show info_outline
534Kbincomplete50323979880-4013889 info_outlinePHAGE_Staphy_SpaA1_NC_018277(6)36.67%Show info_outline
635Kbincomplete60215436141-5471219 info_outlinePHAGE_Bacill_G_NC_023719(2)36.83%Show info_outline
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Region: The number assigned to the region.
Region Length: The length of the sequence of that region (in bp).
Completeness: A prediction of whether the region contains a intact or incomplete prophage based on the above criteria.
Score: The score of the region based on the above criteria.
# Total Proteins: The number of ORFs present in the region.
Region Position: The start and end positions of the region on the bacterial chromosome.
Most Common Phage: The phage(s) with the highest number of proteins most similar to those in the region.
GC %: The percentage of GC nucleotides of the region.

Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:

  1. If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
Method 2:
  1. If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
Method 3:
  1. If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
  2. If the size of the region is greater than 30 Kb, the score will be increased by 10.
  3. If there are at least 40 proteins in the region, the score will be increased by 10.
  4. If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
Compared the total score of method 2 with the total score of method 3, the bigger one is chosen as the total score of the region.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.

gi|00000000|ref|VJWC01000001.1| Bacillus sp. AK8 Ga0265716_11, whole genome shotgun sequence. 5493539, gc%: 35.25%

Download details as .txt file: detail.txt file_download

Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File

Region 1, total 16 CDS

#CDS PositionBLAST HitE-ValueSequence
1916315..917163PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FHX98_0926; phage(gi9630147)1.59e-09Showinfo_outline
2917144..917410hypothetical protein; FHX98_09270.0Showinfo_outline
3917622..918311methyltransferase family protein; FHX98_09280.0Showinfo_outline
4918308..918994glycosyl transferase family 2; FHX98_09290.0Showinfo_outline
5919009..919689glycosyl transferase family 2; FHX98_09300.0Showinfo_outline
6919704..920441PHAGE_Entero_phi92_NC_023693: Phi92_gp066; FHX98_0931; phage(gi726646999)2.65e-64Showinfo_outline
7920450..920995PHAGE_Entero_phi92_NC_023693: Phi92_gp065; FHX98_0932; phage(gi726646998)1.73e-39Showinfo_outline
8921011..921982PHAGE_Entero_phi92_NC_023693: Phi92_gp067; FHX98_0933; phage(gi726647000)4.69e-85Showinfo_outline
9921995..922849PHAGE_Entero_phi92_NC_023693: Phi92_gp064; FHX98_0934; phage(gi726646997)2.47e-42Showinfo_outline
10922958..923728PHAGE_Mycoba_Troll4_NC_011285: gp65; FHX98_0935; phage(gi206599859)1.14e-05Showinfo_outline
11923891..924490merozoite surface protein (SPAM); FHX98_09360.0Showinfo_outline
12complement(924539..925003)spore coat protein Y; FHX98_09370.0Showinfo_outline
13925129..925488PHAGE_Actino_phiAsp2_NC_005885: Pas3; FHX98_0938; phage(gi48697404)1.22e-06Showinfo_outline
14complement(925853..926356)hypothetical protein; FHX98_09390.0Showinfo_outline
15complement(926524..926994)spore coat protein Z; FHX98_09400.0Showinfo_outline
16complement(927137..929203)PHAGE_Bacill_G_NC_023719: gp299; FHX98_0941; phage(gi593777755)3.50e-98Showinfo_outline

Region 2, total 72 CDS

#CDS PositionBLAST HitE-ValueSequence
13093883..3093897attL0.0Showinfo_outline
23094228..3094239attL0.0Showinfo_outline
3complement(3100787..3101353)PHAGE_Staphy_phi2958PVL_NC_011344: Panton-Valentine leukocidin chain F precursor; FHX98_3180; phage(gi209363612)1.99e-05Showinfo_outline
43101754..3102584PHAGE_Bacill_BCP78_NC_018860: hypothetical protein; FHX98_3181; phage(gi410492980)3.51e-109Showinfo_outline
5complement(3102594..3103214)PHAGE_Bacill_phIS3501_NC_019502: phage protein; FHX98_3182; phage(gi422934347)1.85e-154Showinfo_outline
6complement(3103156..3104337)PHAGE_Bacill_phIS3501_NC_019502: FtsK/SpoIIIE family phage protein; FHX98_3183; phage(gi422934346)0.0Showinfo_outline
7complement(3104453..3104635)PHAGE_Bacill_phBC6A51_NC_004820: hypothetical protein; FHX98_3184; phage(gi31415810)1.31e-29Showinfo_outline
8complement(3104632..3104949)PHAGE_Bacill_phIS3501_NC_019502: phage protein; FHX98_3185; phage(gi422934345)1.97e-71Showinfo_outline
93105123..3105323PHAGE_Bacill_PfEFR_5_NC_031055: DNA primase subunit; FHX98_3186; phage(gi100025)2.18e-11Showinfo_outline
103105320..3105538PHAGE_Bacill_Gamma_NC_007458: hypothetical protein; FHX98_3187; phage(gi77020185)2.66e-10Showinfo_outline
113105508..3106086PHAGE_Bacill_phIS3501_NC_019502: phage protein; FHX98_3188; phage(gi422934344)1.44e-140Showinfo_outline
123106140..3106322hypothetical protein; FHX98_31890.0Showinfo_outline
133106375..3106956PHAGE_Bacill_phIS3501_NC_019502: hypothetical protein; FHX98_3190; phage(gi422934343)5.93e-136Showinfo_outline
14complement(3107567..3108267)PHAGE_Bacill_phiCM3_NC_023599: N-acetylmuramoyl-L-alanine amidase; FHX98_3191; phage(gi589892730)1.04e-153Showinfo_outline
15complement(3108267..3108692)PHAGE_Bacill_phIS3501_NC_019502: holin; FHX98_3192; phage(gi422934342)1.28e-96Showinfo_outline
16complement(3108768..3108992)PHAGE_Bacill_phIS3501_NC_019502: phage protein; FHX98_3193; phage(gi422934341)3.22e-45Showinfo_outline
17complement(3109116..3113141)PHAGE_Bacill_phIS3501_NC_019502: phage minor structural protein; FHX98_3194; phage(gi422934340)0.0Showinfo_outline
18complement(3113138..3114622)PHAGE_Bacill_phIS3501_NC_019502: phage tail component; FHX98_3195; phage(gi422934339)0.0Showinfo_outline
19complement(3114634..3118665)PHAGE_Bacill_phIS3501_NC_019502: tail tape measure protein; FHX98_3196; phage(gi422934338)0.0Showinfo_outline
20complement(3118680..3118856)PHAGE_Bacill_phiCM3_NC_023599: hypothetical protein; FHX98_3197; phage(gi589892724)3.27e-35Showinfo_outline
21complement(3118886..3119203)PHAGE_Bacill_phIS3501_NC_019502: phage protein; FHX98_3198; phage(gi422934337)3.05e-73Showinfo_outline
22complement(3119252..3119860)PHAGE_Bacill_phIS3501_NC_019502: phage major tail protein; FHX98_3199; phage(gi422934336)1.12e-142Showinfo_outline
23complement(3119861..3120220)PHAGE_Bacill_phIS3501_NC_019502: phage protein; FHX98_3200; phage(gi422934335)1.52e-84Showinfo_outline
24complement(3120217..3120651)PHAGE_Bacill_phIS3501_NC_019502: gp10 family phage protein; FHX98_3201; phage(gi422934334)2.32e-101Showinfo_outline
25complement(3120644..3120967)PHAGE_Bacill_phIS3501_NC_019502: phage head-tail adaptor; FHX98_3202; phage(gi422934333)5.00e-75Showinfo_outline
26complement(3120954..3121241)PHAGE_Bacill_phIS3501_NC_019502: phage DNA packaging protein; FHX98_3203; phage(gi422934332)1.29e-63Showinfo_outline
27complement(3121262..3122428)PHAGE_Bacill_phIS3501_NC_019502: phage major capsid protein; FHX98_3204; phage(gi422934331)0.0Showinfo_outline
28complement(3122466..3123176)PHAGE_Bacill_phIS3501_NC_019502: ATP-dependent Clp protease; FHX98_3205; phage(gi422934330)3.53e-172Showinfo_outline
29complement(3123163..3124416)PHAGE_Bacill_phIS3501_NC_019502: portal protein; FHX98_3206; phage(gi422934329)0.0Showinfo_outline
30complement(3124605..3126299)PHAGE_Bacill_phIS3501_NC_019502: terminase large subunit; FHX98_3207; phage(gi422934328)0.0Showinfo_outline
31complement(3126301..3126804)PHAGE_Bacill_phIS3501_NC_019502: terminase small subunit; FHX98_3208; phage(gi422934327)1.64e-120Showinfo_outline
32complement(3126933..3127310)PHAGE_Bacill_phIS3501_NC_019502: HNH endonuclease domain protein; FHX98_3209; phage(gi422934326)1.04e-88Showinfo_outline
33complement(3127300..3127554)PHAGE_Bacill_phIS3501_NC_019502: phage protein; FHX98_3210; phage(gi422934325)3.01e-57Showinfo_outline
34complement(3127688..3127900)PHAGE_Bacill_phIS3501_NC_019502: phage protein; FHX98_3211; phage(gi422934324)4.21e-44Showinfo_outline
35complement(3127897..3128175)PHAGE_Bacill_phIS3501_NC_019502: phage protein; FHX98_3212; phage(gi422934323)2.44e-59Showinfo_outline
36complement(3128168..3128389)PHAGE_Bacill_phIS3501_NC_019502: hypothetical protein; FHX98_3213; phage(gi422934322)1.11e-45Showinfo_outline
37complement(3128424..3128711)PHAGE_Bacill_phIS3501_NC_019502: hypothetical protein; FHX98_3214; phage(gi422934321)2.06e-63Showinfo_outline
38complement(3129141..3129365)PHAGE_Bacill_phIS3501_NC_019502: hypothetical protein; FHX98_3215; phage(gi422934320)2.76e-46Showinfo_outline
39complement(3129581..3130123)PHAGE_Bacill_phIS3501_NC_019502: site-specific phage integrase; FHX98_3216; phage(gi422934319)3.53e-131Showinfo_outline
40complement(3130120..3130605)PHAGE_Bacill_phIS3501_NC_019502: ArpU family phage transcriptional regulator; FHX98_3217; phage(gi422934318)2.60e-117Showinfo_outline
41complement(3130965..3131246)PHAGE_Bacill_phIS3501_NC_019502: hypothetical protein; FHX98_3218; phage(gi422934317)6.01e-61Showinfo_outline
42complement(3131979..3132143)PHAGE_Bacill_phiCM3_NC_023599: hypothetical protein; FHX98_3219; phage(gi589892758)7.90e-24Showinfo_outline
43complement(3132182..3132376)PHAGE_Strept_858_NC_010353: orf42; FHX98_3220; phage(gi168229315)2.90e-07Showinfo_outline
44complement(3132576..3132839)PHAGE_Bacill_phIS3501_NC_019502: hypothetical protein; FHX98_3221; phage(gi422934315)7.23e-58Showinfo_outline
45complement(3133207..3133410)PHAGE_Bacill_IEBH_NC_011167: hypothetical protein; FHX98_3222; phage(gi197261537)4.76e-20Showinfo_outline
46complement(3133451..3133843)PHAGE_Bacill_phIS3501_NC_019502: phage protein; FHX98_3223; phage(gi422934314)7.98e-94Showinfo_outline
47complement(3133871..3134179)PHAGE_Bacill_phIS3501_NC_019502: hypothetical protein; FHX98_3224; phage(gi422934313)2.06e-69Showinfo_outline
48complement(3134341..3134532)PHAGE_Bacill_phIS3501_NC_019502: hypothetical protein; FHX98_3225; phage(gi422934312)4.09e-40Showinfo_outline
493134911..3135210PHAGE_Bacill_phIS3501_NC_019502: hypothetical protein; FHX98_3226; phage(gi422934311)2.16e-68Showinfo_outline
50complement(3135207..3135422)PHAGE_Bacill_phIS3501_NC_019502: phage protein; FHX98_3227; phage(gi422934310)3.76e-48Showinfo_outline
51complement(3135440..3135604)PHAGE_Staphy_SpaA1_NC_018277: phage related protein; FHX98_3228; phage(gi399498906)5.45e-33Showinfo_outline
52complement(3135676..3135942)PHAGE_Bacill_phIS3501_NC_019502: group-specific phage protein; FHX98_3229; phage(gi422934309)1.60e-60Showinfo_outline
53complement(3135984..3136796)PHAGE_Bacill_phIS3501_NC_019502: phage replication protein DnaC; FHX98_3230; phage(gi422934308)0.0Showinfo_outline
54complement(3136759..3137763)PHAGE_Bacill_phIS3501_NC_019502: phage replication protein DnaD; FHX98_3231; phage(gi422934307)0.0Showinfo_outline
55complement(3138008..3138655)PHAGE_Bacill_phIS3501_NC_019502: RNA-polymerase sigma-factor; FHX98_3232; phage(gi422934306)2.18e-159Showinfo_outline
56complement(3138929..3139243)PHAGE_Bacill_phIS3501_NC_019502: hypothetical protein; FHX98_3233; phage(gi422934305)2.31e-70Showinfo_outline
57complement(3139264..3139380)PHAGE_Staphy_SpaA1_NC_018277: phage related protein; FHX98_3234; phage(gi399498900)2.88e-15Showinfo_outline
58complement(3139406..3140185)PHAGE_Bacill_phIS3501_NC_019502: putative antirepressor; FHX98_3235; phage(gi422934304)0.0Showinfo_outline
59complement(3140231..3140386)PHAGE_Staphy_SpaA1_NC_018277: phage related protein; FHX98_3236; phage(gi399498898)1.12e-25Showinfo_outline
60complement(3140403..3140591)PHAGE_Staphy_SpaA1_NC_018277: transcriptional regulator, pbsX; FHX98_3237; phage(gi399498897)5.15e-24Showinfo_outline
61complement(3140584..3140709)hypothetical protein; FHX98_32380.0Showinfo_outline
62complement(3140736..3140981)hypothetical protein; FHX98_32390.0Showinfo_outline
633141228..3141557PHAGE_Bacill_phIS3501_NC_019502: transcriptional regulator XRE family protein; FHX98_3240; phage(gi422934302)1.13e-73Showinfo_outline
64complement(3141575..3141700)hypothetical protein; FHX98_32410.0Showinfo_outline
65complement(3141832..3141981)hypothetical protein; FHX98_32420.0Showinfo_outline
66complement(3141978..3143231)PHAGE_Bacill_phIS3501_NC_019502: helix-turn-helix protein; FHX98_3243; phage(gi422934301)0.0Showinfo_outline
67complement(3143373..3143627)PHAGE_Bacill_phIS3501_NC_019502: hypothetical protein; FHX98_3244; phage(gi422934300)1.90e-54Showinfo_outline
683144196..3144269tRNA0.0Showinfo_outline
693144247..3144258attR0.0Showinfo_outline
703144708..3145769PHAGE_Bacill_phIS3501_NC_019502: phage integrase; FHX98_3246; phage(gi422934298)0.0Showinfo_outline
71complement(3145815..3146423)PHAGE_Staphy_phi7401PVL_NC_020199: Panton-Valentine leukocidin chain S precursor; FHX98_3247; phage(gi448244684)1.00e-08Showinfo_outline
723155718..3155732attR0.0Showinfo_outline

Region 3, total 61 CDS

#CDS PositionBLAST HitE-ValueSequence
1complement(3202654..3204933)PHAGE_Escher_RCS47_NC_042128: hypothetical protein; FHX98_3300; phage(gi100132)3.63e-15Showinfo_outline
23205276..3206259PHAGE_Bacill_phi4J1_NC_029008: hypothetical protein; FHX98_3301; phage(gi971821635)0.0Showinfo_outline
3complement(3206285..3206905)PHAGE_Bacill_phIS3501_NC_019502: phage protein; FHX98_3302; phage(gi422934347)1.33e-148Showinfo_outline
4complement(3206847..3208028)PHAGE_Bacill_phIS3501_NC_019502: FtsK/SpoIIIE family phage protein; FHX98_3303; phage(gi422934346)0.0Showinfo_outline
5complement(3208144..3208326)PHAGE_Bacill_phBC6A51_NC_004820: hypothetical protein; FHX98_3304; phage(gi31415810)3.21e-30Showinfo_outline
6complement(3208323..3208640)PHAGE_Bacill_phIS3501_NC_019502: phage protein; FHX98_3305; phage(gi422934345)3.74e-69Showinfo_outline
73208846..3209049PHAGE_Bacill_phBC6A51_NC_004820: Transcriptional regulator, PBSX family; FHX98_3306; phage(gi31415807)2.06e-35Showinfo_outline
83209054..3209638PHAGE_Bacill_phIS3501_NC_019502: phage protein; FHX98_3307; phage(gi422934344)1.78e-103Showinfo_outline
9complement(3210028..3210732)PHAGE_Bacill_phiCM3_NC_023599: N-acetylmuramoyl-L-alanine amidase; FHX98_3308; phage(gi589892730)2.06e-142Showinfo_outline
103210084..3210095attL0.0Showinfo_outline
11complement(3210732..3210962)PHAGE_Paenib_Willow_NC_041867: hypothetical protein; FHX98_3309; phage(gi100020)2.94e-24Showinfo_outline
12complement(3211029..3211253)PHAGE_Bacill_phIS3501_NC_019502: phage protein; FHX98_3310; phage(gi422934341)3.02e-31Showinfo_outline
13complement(3211353..3215624)PHAGE_Bacill_Pascal_NC_027372: hypothetical protein; FHX98_3311; phage(gi100019)1.09e-149Showinfo_outline
14complement(3215637..3217091)hypothetical protein; FHX98_33120.0Showinfo_outline
15complement(3217103..3217510)H-type lectin domain-containing protein; FHX98_33130.0Showinfo_outline
16complement(3217485..3218993)PHAGE_Bacill_BM5_NC_029069: hypothetical protein; FHX98_3314; phage(gi985757792)1.49e-15Showinfo_outline
17complement(3219010..3219585)hypothetical protein; FHX98_33150.0Showinfo_outline
18complement(3219542..3220012)hypothetical protein; FHX98_33160.0Showinfo_outline
19complement(3220065..3221255)PHAGE_Arthro_Adat_NC_042020: hypothetical protein; FHX98_3317; phage(gi100015)3.23e-48Showinfo_outline
20complement(3221271..3222119)hypothetical protein; FHX98_33180.0Showinfo_outline
21complement(3222203..3222457)PHAGE_Bacill_BMBtp2_NC_019912: hypothetical protein; FHX98_3319; phage(gi431809501)7.06e-31Showinfo_outline
22complement(3222457..3222720)PHAGE_Bacill_JL_NC_028982: hypothetical protein; FHX98_3320; phage(gi971762827)3.33e-39Showinfo_outline
23complement(3222717..3222968)PHAGE_Entero_IME11_NC_019423: hypothetical protein; FHX98_3321; phage(gi414090513)2.97e-18Showinfo_outline
24complement(3222968..3223243)PHAGE_Bacill_BMBtpLA_NC_028748: hypothetical protein; FHX98_3322; phage(gi971482548)1.41e-30Showinfo_outline
25complement(3223244..3225367)PHAGE_Arthro_Adat_NC_042020: hypothetical protein; FHX98_3323; phage(gi100013)2.37e-42Showinfo_outline
26complement(3225425..3225625)hypothetical protein; FHX98_33240.0Showinfo_outline
27complement(3225639..3225869)hypothetical protein; FHX98_33250.0Showinfo_outline
28complement(3225866..3227329)PHAGE_Bacill_Pony_NC_022770: terminase large subunit; FHX98_3326; phage(gi568191534)0.0Showinfo_outline
29complement(3227295..3227831)PHAGE_Lactoc_98201_NC_031064: hypothetical protein; FHX98_3327; phage(gi100030)5.73e-51Showinfo_outline
30complement(3227874..3228446)PHAGE_Salmon_Fels_2_NC_010463: DNA-invertase; FHX98_3328; phage(gi169936026)5.43e-59Showinfo_outline
31complement(3228599..3228805)hypothetical protein; FHX98_33290.0Showinfo_outline
32complement(3228867..3229022)PHAGE_Bacill_phBC6A51_NC_004820: hypothetical protein; FHX98_3330; phage(gi31415775)3.06e-14Showinfo_outline
33complement(3229307..3229522)hypothetical protein; FHX98_33310.0Showinfo_outline
34complement(3229884..3230258)PHAGE_Bacill_phi105_NC_004167: hypothetical protein; FHX98_3332; phage(gi22855040)1.96e-24Showinfo_outline
35complement(3230928..3231725)PHAGE_Staphy_37_NC_007055: ORF016; FHX98_3333; phage(gi66395745)3.54e-87Showinfo_outline
36complement(3231760..3231942)PHAGE_Bacill_Grass_NC_022771: hypothetical protein; FHX98_3334; phage(gi568191701)1.01e-06Showinfo_outline
37complement(3232121..3232285)PHAGE_Bacill_phiCM3_NC_023599: hypothetical protein; FHX98_3335; phage(gi589892758)2.14e-19Showinfo_outline
38complement(3232518..3233252)PHAGE_Bacill_WBeta_NC_007734: putative RNA polymerase sigma subunit; FHX98_3336; phage(gi85701416)6.27e-74Showinfo_outline
39complement(3233236..3233658)hypothetical protein; FHX98_33370.0Showinfo_outline
40complement(3233668..3234390)PHAGE_Staphy_SpaA1_NC_018277: Zn-finger protein fused to HTH domain; FHX98_3338; phage(gi399498916)3.28e-11Showinfo_outline
41complement(3234380..3235048)PHAGE_Lister_B054_NC_009813: gp58; FHX98_3339; phage(gi157325342)1.10e-12Showinfo_outline
42complement(3235064..3235489)PHAGE_Bacill_vB_BhaS_171_NC_030904: aerobic ribonucleotide reductase B subunit; FHX98_3340; phage(gi100063)1.38e-38Showinfo_outline
43complement(3235502..3235981)PHAGE_Bacill_G_NC_023719: gp577; FHX98_3341; phage(gi593778019)7.76e-09Showinfo_outline
44complement(3235987..3236796)PHAGE_Bacill_phIS3501_NC_019502: phage replication protein DnaC; FHX98_3342; phage(gi422934308)3.19e-74Showinfo_outline
45complement(3236750..3237229)PHAGE_Bacill_phi4J1_NC_029008: DnaB/DnaD family replication initiation and membrane attachment protein; FHX98_3343; phage(gi971821590)1.46e-31Showinfo_outline
46complement(3237208..3237594)PHAGE_Bacill_phi4J1_NC_029008: DnaB/DnaD family replication initiation and membrane attachment protein; FHX98_3344; phage(gi971821590)5.99e-66Showinfo_outline
47complement(3237601..3237771)PHAGE_Bacill_PfEFR_5_NC_031055: hypothetical protein; FHX98_3345; phage(gi100037)7.90e-13Showinfo_outline
48complement(3237768..3238574)PHAGE_Thermu_OH2_NC_021784: RecT protein; FHX98_3346; phage(gi526118350)9.71e-131Showinfo_outline
49complement(3238596..3239531)PHAGE_Thermu_OH2_NC_021784: phage-type endonuclease; FHX98_3347; phage(gi526118352)2.00e-130Showinfo_outline
50complement(3239610..3239804)hypothetical protein; FHX98_33480.0Showinfo_outline
51complement(3239797..3240060)hypothetical protein; FHX98_33490.0Showinfo_outline
52complement(3240061..3240363)PHAGE_Bacill_phIS3501_NC_019502: hypothetical protein; FHX98_3350; phage(gi422934305)1.46e-40Showinfo_outline
53complement(3240426..3240581)PHAGE_Staphy_SpaA1_NC_018277: phage related protein; FHX98_3351; phage(gi399498898)1.70e-27Showinfo_outline
54complement(3240641..3241288)PHAGE_Bacill_phIS3501_NC_019502: RNA-polymerase sigma-factor; FHX98_3352; phage(gi422934306)9.90e-118Showinfo_outline
55complement(3241309..3241497)PHAGE_Staphy_SpaA1_NC_018277: transcriptional regulator, pbsX; FHX98_3353; phage(gi399498897)2.96e-27Showinfo_outline
56complement(3241563..3241769)PHAGE_Gordon_BaxterFox_NC_031226: ssDNA binding protein; FHX98_3354; phage(gi100044)1.07e-06Showinfo_outline
573241939..3242283PHAGE_Bacill_phIS3501_NC_019502: transcriptional regulator XRE family protein; FHX98_3355; phage(gi422934302)7.92e-22Showinfo_outline
58complement(3242280..3242426)hypothetical protein; FHX98_33560.0Showinfo_outline
59complement(3242686..3243906)PHAGE_Bacill_phiCM3_NC_023599: HTH transcriptional regulator; FHX98_3357; phage(gi589892737)2.58e-92Showinfo_outline
603244315..3244326attR0.0Showinfo_outline
613244714..3245805PHAGE_Bacill_phIS3501_NC_019502: phage integrase; FHX98_3358; phage(gi422934298)0.0Showinfo_outline

Region 4, total 48 CDS

#CDS PositionBLAST HitE-ValueSequence
13471303..3471315attL0.0Showinfo_outline
2complement(3485312..3486121)PHAGE_Bacill_phBC6A52_NC_004821: N-acetylmuramoyl-L-alanine amidase; FHX98_3592; phage(gi31415865)1.82e-150Showinfo_outline
3complement(3486121..3486348)PHAGE_Bacill_VMY22_NC_028789: bacteriocin biosynthesis protein; FHX98_3593; phage(gi971743636)1.64e-28Showinfo_outline
4complement(3486388..3486753)PHAGE_Bacill_phi4J1_NC_029008: hypothetical protein; FHX98_3594; phage(gi971821601)7.40e-57Showinfo_outline
5complement(3486775..3491094)PHAGE_Bacill_phi4J1_NC_029008: tail fiber; FHX98_3595; phage(gi971821625)0.0Showinfo_outline
6complement(3491091..3492560)PHAGE_Bacill_phi4J1_NC_029008: distal tail protein; FHX98_3596; phage(gi971821575)0.0Showinfo_outline
7complement(3492602..3493489)PHAGE_Lister_LP_030_2_NC_021539: tail tape measure protein; FHX98_3597; phage(gi514051947)6.26e-22Showinfo_outline
8complement(3493715..3496228)PHAGE_Geobac_GBSV1_NC_008376: TMP repeat protein; FHX98_3598; phage(gi115334639)0.0Showinfo_outline
9complement(3496246..3496353)PHAGE_Geobac_GBSV1_NC_008376: hypothetical protein; FHX98_3599; phage(gi115334638)5.41e-08Showinfo_outline
10complement(3496461..3496823)PHAGE_Geobac_GBSV1_NC_008376: hypothetical protein; FHX98_3600; phage(gi115334637)4.41e-36Showinfo_outline
11complement(3496828..3497415)PHAGE_Geobac_GBSV1_NC_008376: major tail protein; FHX98_3601; phage(gi115334636)1.08e-51Showinfo_outline
12complement(3497416..3497751)PHAGE_Geobac_GBSV1_NC_008376: aminopeptidase; FHX98_3602; phage(gi115334635)2.35e-26Showinfo_outline
13complement(3497748..3498092)PHAGE_Geobac_GBSV1_NC_008376: hypothetical protein; FHX98_3603; phage(gi115334634)8.53e-21Showinfo_outline
14complement(3498094..3498444)PHAGE_Geobac_E2_NC_009552: putative head-tail adaptor; FHX98_3604; phage(gi148747735)4.45e-28Showinfo_outline
15complement(3498446..3498742)PHAGE_Lister_LP_030_2_NC_021539: putative head-tail connector protein; FHX98_3605; phage(gi514051939)5.89e-12Showinfo_outline
16complement(3498755..3499918)PHAGE_Lister_LP_101_NC_024387: major capsid protein; FHX98_3606; phage(gi658607815)6.69e-83Showinfo_outline
17complement(3499938..3500711)PHAGE_Clostr_phiCTC2B_NC_030951: membrane-associated initiation of head vertex; FHX98_3607; phage(gi100034)2.58e-77Showinfo_outline
18complement(3500695..3501792)PHAGE_Lister_LP_101_NC_024387: portal protein; FHX98_3608; phage(gi658607813)6.29e-105Showinfo_outline
19complement(3501867..3503522)PHAGE_Bacill_vB_BhaS_171_NC_030904: hypothetical protein; FHX98_3609; phage(gi100006)0.0Showinfo_outline
20complement(3503519..3503875)PHAGE_Staphy_23MRA_NC_028775: hypothetical protein; FHX98_3610; phage(gi971742325)3.64e-42Showinfo_outline
21complement(3504026..3504361)PHAGE_Bacill_vB_BhaS_171_NC_030904: DNA topoisomerase medium subunit; FHX98_3611; phage(gi100004)1.75e-39Showinfo_outline
22complement(3504327..3504599)PHAGE_Bacill_phIS3501_NC_019502: phage protein; FHX98_3612; phage(gi422934324)1.05e-10Showinfo_outline
23complement(3504596..3504817)PHAGE_Bacill_IEBH_NC_011167: hypothetical protein; FHX98_3613; phage(gi197261557)1.50e-33Showinfo_outline
243505096..3505536rubrerythrin; FHX98_36140.0Showinfo_outline
253507061..3507261PHAGE_Lactoc_bIL312_NC_002671: Csp; FHX98_3615; phage(gi13095918)1.55e-28Showinfo_outline
26complement(3507384..3507926)PHAGE_Bacill_phiCM3_NC_023599: integrase; FHX98_3616; phage(gi589892763)4.07e-120Showinfo_outline
27complement(3507926..3508390)PHAGE_Bacill_phiCM3_NC_023599: transcriptional regulator; FHX98_3617; phage(gi589892762)4.24e-75Showinfo_outline
283508646..3508810PHAGE_Bacill_phBC6A52_NC_004821: hypothetical protein; FHX98_3618; phage(gi31415836)5.48e-13Showinfo_outline
293509979..3511295PHAGE_Bacill_WBeta_NC_007734: collagen triple helix repeat protein; FHX98_3619; phage(gi85701419)3.71e-43Showinfo_outline
30complement(3512120..3512302)hypothetical protein; FHX98_36200.0Showinfo_outline
31complement(3512336..3512527)PHAGE_Bacill_phBC6A52_NC_004821: hypothetical protein; FHX98_3621; phage(gi31415831)7.82e-11Showinfo_outline
32complement(3512601..3512963)PHAGE_Bacill_Waukesha92_NC_025424: hypothetical protein; FHX98_3622; phage(gi712912380)6.16e-22Showinfo_outline
33complement(3512938..3513126)hypothetical protein; FHX98_36230.0Showinfo_outline
34complement(3513129..3514451)PHAGE_Geobac_GBK2_NC_023612: helicase; FHX98_3624; phage(gi589893809)3.45e-140Showinfo_outline
35complement(3514448..3515398)PHAGE_Geobac_E2_NC_009552: putative replication protein; FHX98_3625; phage(gi148747766)2.28e-69Showinfo_outline
36complement(3515400..3515576)hypothetical protein; FHX98_36260.0Showinfo_outline
37complement(3515678..3515962)PHAGE_Deep_s_D6E_NC_019544: hypothetical protein; FHX98_3627; phage(gi423262356)1.22e-07Showinfo_outline
383516146..3516445PHAGE_Lactob_Lj928_NC_005354: putative major head protein; FHX98_3628; phage(gi41179318)1.60e-05Showinfo_outline
39complement(3516442..3516657)PHAGE_Staphy_SpaA1_NC_018277: XRE family transcriptional regulator; FHX98_3629; phage(gi399498907)1.19e-33Showinfo_outline
40complement(3516841..3517062)PHAGE_Geobac_E2_NC_009552: hypothetical protein; FHX98_3630; phage(gi158380391)2.94e-06Showinfo_outline
41complement(3517076..3517663)hypothetical protein; FHX98_36310.0Showinfo_outline
42complement(3517754..3518002)hypothetical protein; FHX98_36320.0Showinfo_outline
43complement(3518037..3518252)PHAGE_Lister_vB_LmoS_188_NC_028871: XRE family transcriptional regulator; FHX98_3633; phage(gi971750831)8.15e-12Showinfo_outline
443518402..3518839PHAGE_Geobac_GBSV1_NC_008376: immunity repressor protein; FHX98_3634; phage(gi115334658)5.34e-32Showinfo_outline
453518853..3519287PHAGE_Geobac_GBSV1_NC_008376: hypothetical protein; FHX98_3635; phage(gi115334657)2.53e-47Showinfo_outline
463519443..3520246hypothetical protein; FHX98_36360.0Showinfo_outline
473520519..3522066PHAGE_Thermo_THSA_485A_NC_018264: Recombinase; FHX98_3637; phage(gi397912662)0.0Showinfo_outline
483523910..3523922attR0.0Showinfo_outline

Region 5, total 35 CDS

#CDS PositionBLAST HitE-ValueSequence
13979880..3979893attL0.0Showinfo_outline
2complement(3988978..3990168)PHAGE_Arthro_Adat_NC_042020: hypothetical protein; FHX98_4146; phage(gi100015)2.14e-48Showinfo_outline
3complement(3990184..3991047)hypothetical protein; FHX98_41470.0Showinfo_outline
4complement(3991131..3991400)PHAGE_Staphy_SpaA1_NC_018277: phage related protein gp64; FHX98_4148; phage(gi399498869)1.91e-52Showinfo_outline
5complement(3991400..3991651)PHAGE_Entero_IME11_NC_019423: hypothetical protein; FHX98_4149; phage(gi414090513)1.43e-17Showinfo_outline
6complement(3991651..3991863)PHAGE_Bacill_JL_NC_028982: hypothetical protein; FHX98_4150; phage(gi971762828)6.91e-36Showinfo_outline
7complement(3991864..3993987)PHAGE_Arthro_Adat_NC_042020: hypothetical protein; FHX98_4151; phage(gi100013)4.34e-42Showinfo_outline
8complement(3994046..3994246)hypothetical protein; FHX98_41520.0Showinfo_outline
9complement(3994260..3994490)hypothetical protein; FHX98_41530.0Showinfo_outline
10complement(3994487..3995980)PHAGE_Bacill_Pony_NC_022770: terminase large subunit; FHX98_4154; phage(gi568191534)0.0Showinfo_outline
11complement(3995946..3996452)PHAGE_Clostr_phiCDHM19_NC_028996: putative terminase small subunit protein; FHX98_4155; phage(gi971763866)1.76e-50Showinfo_outline
12complement(3996494..3997099)PHAGE_Salmon_Fels_2_NC_010463: DNA-invertase; FHX98_4156; phage(gi169936026)1.10e-56Showinfo_outline
13complement(3997225..3997359)hypothetical protein; FHX98_41570.0Showinfo_outline
14complement(3998118..3998513)PHAGE_Bacill_Gamma_NC_007458: conserved phage protein; FHX98_4158; phage(gi77020164)1.80e-44Showinfo_outline
15complement(3998959..4000836)PHAGE_Strept_P9_NC_009819: primase; FHX98_4159; phage(gi157311152)9.72e-40Showinfo_outline
16complement(4001032..4001283)PHAGE_Bacill_BMBtpLA_NC_028748: hypothetical protein; FHX98_4160; phage(gi971482539)2.45e-11Showinfo_outline
17complement(4001285..4002973)PHAGE_Entero_IME_EFm5_NC_028826: DNA polymerase; FHX98_4161; phage(gi971746927)1.15e-70Showinfo_outline
18complement(4003037..4003528)uncharacterized protein DUF669; FHX98_41620.0Showinfo_outline
19complement(4003528..4003845)hypothetical protein; FHX98_41630.0Showinfo_outline
20complement(4003869..4005788)PHAGE_Strept_phiARI0460_1_NC_031913: membrane-associated initiation of head vertex; FHX98_4164; phage(gi100034)1.28e-18Showinfo_outline
21complement(4005788..4006066)PHAGE_Entero_IME_EFm1_NC_024356: hypothetical protein; FHX98_4165; phage(gi658310507)1.12e-13Showinfo_outline
22complement(4006067..4006384)hypothetical protein; FHX98_41660.0Showinfo_outline
23complement(4006374..4007609)PHAGE_Entero_IME_EFm5_NC_028826: helicase; FHX98_4167; phage(gi971746909)1.05e-34Showinfo_outline
24complement(4007657..4008301)PHAGE_Staphy_SpaA1_NC_018277: sigma70, RNA polymerase sigma factor; FHX98_4168; phage(gi399498902)1.65e-95Showinfo_outline
25complement(4008322..4008510)PHAGE_Staphy_SpaA1_NC_018277: transcriptional regulator, pbsX; FHX98_4169; phage(gi399498897)2.83e-28Showinfo_outline
26complement(4008522..4008719)hypothetical protein; FHX98_41700.0Showinfo_outline
27complement(4008740..4008895)PHAGE_Staphy_SpaA1_NC_018277: phage related protein; FHX98_4171; phage(gi399498898)1.35e-20Showinfo_outline
28complement(4008915..4009235)PHAGE_Bacill_phBC6A51_NC_004820: Transcriptional regulator; FHX98_4172; phage(gi31415745)3.85e-08Showinfo_outline
294009414..4009752PHAGE_Staphy_SpaA1_NC_018277: XRE family transcriptional regulator; FHX98_4173; phage(gi399498895)4.45e-10Showinfo_outline
30complement(4009776..4009952)PHAGE_Bacill_phBC6A51_NC_004820: hypothetical protein; FHX98_4174; phage(gi31415743)3.32e-09Showinfo_outline
31complement(4010088..4010237)hypothetical protein; FHX98_41750.0Showinfo_outline
32complement(4010234..4011487)PHAGE_Bacill_phIS3501_NC_019502: helix-turn-helix protein; FHX98_4176; phage(gi422934301)0.0Showinfo_outline
334012452..4012525tRNA0.0Showinfo_outline
344012723..4012736attR0.0Showinfo_outline
354012828..4013889PHAGE_Staphy_SpaA1_NC_018277: DNA integration/recombination/inversion protein; FHX98_4178; phage(gi399498892)0.0Showinfo_outline

Region 6, total 23 CDS

#CDS PositionBLAST HitE-ValueSequence
15436141..5436152attL0.0Showinfo_outline
25442283..5442975PROPHAGE_Escher_MG1655: protease specific for Gcp(YgjD), essential for nucleoid maintanence; FHX98_5718; phage(gi16129761)9.56e-17Showinfo_outline
35442990..5443433PHAGE_Erwini_vB_EamM_Phobos_NC_031043: hypothetical protein; FHX98_5719; phage(gi100097)3.11e-05Showinfo_outline
45443433..5444449PROPHAGE_Escher_MG1655: glycation-binding protein, predicted protease/chaperone; essential for genome maintenance; FHX98_5720; phage(gi16130960)8.60e-90Showinfo_outline
5complement(5444934..5446868)PHAGE_Bacill_G_NC_023719: gp245; FHX98_5721; phage(gi593777701)8.79e-09Showinfo_outline
65447056..5447685redox-sensing transcriptional repressor; FHX98_57220.0Showinfo_outline
7complement(5447715..5447906)uncharacterized protein DUF4305; FHX98_57230.0Showinfo_outline
8complement(5447903..5448652)PHAGE_Bacill_G_NC_023719: gp60; FHX98_5724; phage(gi593777528)1.85e-06Showinfo_outline
95449044..5449328PHAGE_Pectob_CBB_NC_041878: holin; FHX98_5725; phage(gi100268)8.40e-11Showinfo_outline
105449368..5451002PHAGE_Cellul_phi14:2_NC_021806: chaperonin GroEL; FHX98_5726; phage(gi526178751)3.87e-105Showinfo_outline
11complement(5451081..5452259)PHAGE_Thermu_OH2_NC_021784: integrase; FHX98_5727; phage(gi526118367)0.0Showinfo_outline
12complement(5452308..5452892)PHAGE_Staphy_CNPx_NC_031241: RecA-like recombination protein; FHX98_5728; phage(gi100035)4.24e-10Showinfo_outline
135453114..5453401PHAGE_Paenib_Tripp_NC_028930: excisionase-like protein; FHX98_5729; phage(gi971756994)2.88e-09Showinfo_outline
145453520..5453666hypothetical protein; FHX98_57300.0Showinfo_outline
155453681..5454007hypothetical protein; FHX98_57310.0Showinfo_outline
165454111..5456663PHAGE_Staphy_PT1028_NC_007045: ORF001; FHX98_5732; phage(gi66395165)2.15e-83Showinfo_outline
175456977..5457195hypothetical protein; FHX98_57330.0Showinfo_outline
185457217..5457597PHAGE_Bacill_Gamma_NC_007458: conserved phage protein; FHX98_5734; phage(gi77020164)2.19e-65Showinfo_outline
195457618..5457902hypothetical protein; FHX98_57350.0Showinfo_outline
205458258..5458395hypothetical protein; FHX98_57360.0Showinfo_outline
215458427..5459053hypothetical protein; FHX98_57370.0Showinfo_outline
225459083..5459685PHAGE_Clostr_phi3626_NC_003524: putative prohead protease; FHX98_5738; phage(gi20065968)5.42e-22Showinfo_outline
235471219..5471230attR0.0Showinfo_outline
Bacillus sp. AK8 Ga0265716_11, whole genome shotgun sequence
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Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)

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Length: 5493539 bps
Phages: 6
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Lysis
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Fiber Protein
Plate Protein
tRNA

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