PHASTER

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Submission Results

Sequence Name: Not Available

GenBank Accession Number: VLPP01000096.1

GenInfo (GI) Number: 0000000000

Download Results: VLPP01000096.1.PHASTER.zip

Summary
Details
Genome Viewer

gi|00000000|ref|VLPP01000096.1| Bacillus thuringiensis strain PT18 gnl_MG_PT18_96, whole genome 16809, gc%: 34.11%

Download summary as .txt file: summary.txt

Total: 1 prophage regions have been identified, of which 0 regions are intact, 1 regions are incomplete, and 0 regions are questionable.

Region	Region Length	Completeness	Score	# Total Proteins	Region Position	Most Common Phage	GC %	Details
1	16.7Kb	incomplete	30	27	66-16809	PHAGE_Bacill_Waukesha92_NC_025424(26)	34.14%	Show

Region DNA

>1	 66-16809
CTAAACCCAAAAATTAACGATGTATGCTCCGTTCATTTGAATTTCTTTTCTTGCATAAGT
CGTTTTTCCATTTTTAAACTTGACTGGTTTATAGAACCCGTTTTTACTAACATCAGATGC
TCTGTTAGCATGTTGATATTGATATATTTTAAATTCATTTGCATATACAACCGGATCATG
TCCTGCTCCCCAACTGTCCCAACGACCTTCGACAAACTTAGCTGGATCATCACAAATTGC
ATAAATACTATCTTCTTCATTAATTACGAGGTATATATCATCCCAATCTTGCATTGTTTT
CAATCCATTCTTAATAGCTCTCATTGCATCTAACGCACCAATAAAATCAGCTTCCATAGT
AATTAACATCCTTTCGTTATTTAAGATATTTAGTTACATATTGCGGTCTAAATCCACTAT
CTAAATAGATTCTTAGCTGCTGTGGCTCTTGCGATTCCCTAGCCGCGCAGCAAATCCTCT
CTGCGGAATCCCAATGAAAACTTTTGTCTTCACTTCTCTTATAACGCCATATAGCTTTGA
CATAATCCATGAACATGTCAAAGTGATTATCCTGTTTTGTAGAGCGAGGCAGTTCGTCCG
CGCTCCAGACGTCGCATGGAATAATAGCCATGACATCTACAAAGCTCGCCAATCCTCGCC
TTTGTTTTACATGCGCCTTCTTTATATCAAAAGGAGCACTTTGTACTATATCTGGTTGTT
TTATAGAATCATTCAGTAACAGTGTCAGTTGTTCCGTCATGGTGCTCACCTTCTAACTGC
ATTTGCAGTGTTGCAGTGAATCCGCGTTCTAATATTGATCCGATAACTGCATTCATCCAT
AAATGAGTTCCGATCTTCCTTTGTAAAAGTGTTATAATCGTTAGTATTTCTTTTGTAGAG
AGTGAGACAAATTCACCTGATTTTTCTTGGTTAAATTGCCCACCACGCTTTTCTATGTTT
AAAGTAATGTTATTTTCTTTCACATATTGTTCTGCCTTAATTAGATCAAACTGACGAACC
TTATCGCGTCCATATTTGGTAATTAACGCTTTTAACATGTCTACTAAAACATTGACATCT
ATCACTTTTAATTTGGTTTCCATCTCACCACGGCAAGATTTGCATAACGTTTTTTCGCAT
CCCTCAATGTGCATATTTGTTACATCGGATTCTGGTATTACATCACCGCAAATATCGCAC
CATTCACTATTGTCAAACAACGCACTGAACATAAATTTCAACTCCCAACCTTTAATTTTT
TATCGTTTATATTTAATGCACTTATTGCATGGCCGCTAGTGCGTTTATGTGTACTAATGT
GTTATAATTGCAAATGTAAATTCTTTCTTAACTACCCATCTCGCAAATGGGTATTTTTTA
TACACTTTTTTTGATTTCTTCTACTATCTTCGAACTTCCACTAACTTCTTCTAGATGCTT
AGCAACTTTCAAAACTTCATTTCTTTCTTTATTTCTATTTTGTTGATCACTCTTCTGCTT
TTGCATGTACAGGTCCATAAGTTCCGATTCAATCGCAACTGCTTCACTAGATTGTTTGTC
GCATAGTGTTTTTAATTCTTGAGCAGCTGTAAACTCACCAGAATTCATTGCTCTTTCACA
TTGAGAAAGTAATAACTTACGATTCATCATATATTCTCGAAGCTTTCCCTCTAAAAGTTC
AGCTCTTTGTACATGCTCAGGAAGCACTCTGTCTCTTATTCCCAATTACATTCACTTCCC
GTTCTTGTTTACGGTCATCTTCATCGAGTTTTCGCTCGATGAAGCTACCGCCTTTGTATG
CTGCTAATGCTAGTAATCCAAGTCCTAAACCAAAGATACACACGGCATTGGTACTCTCAA
CTAAGACAATGTCCATTACGCAATAATAAATACCTTTTTAGATTCAATTTCCTCTGCTAA
TTCAGCAGTTAAATACTCTTTAATGTTGTCAATTGCTTCTAGTTTCCATGCGCCACCGTC
CGCTTCAAATAATGCACATTCTGGACCTTTACGCATTCGGAATATAAAATTACTTTCTGG
TTGTTCAACTTCAACAAATGTTCTGTATGGCTTTAATAAAACCGGATTAGGTACTTTCAC
ATTCCCTACAGTAGCAACGCCCATTTTTGCTACGACACTTTGAGAAACACCATCGTCACC
AATTGTATTTACAGCCTCTTCCTTGACATTTCCAACAAGCTTGAGCATTAAATCACGATC
TGAATTCGGTACAAATGCAGACTGTAAACTAATATTAAAATTCTCTACATCATGGTATCT
TTCAAATGAAAAACGCGGTAATAATGCTTCTACTTGAATAAAATTACTACGATTATAGTC
ATTGTTAATTTGCGTGAAGCAAGAAACACTTGTTGGACTTTCAATATGAACCATTAATGG
ATGATCTCCATCAAACTGCGATTTAATATAGGCAACTAAACCAGAAAGATTATTTACAGT
GATTGTTTTTGCTGTCGGTTTCTTAATAACATGCATAGGTTGTGTTGATAACTTTTGTCC
ATTAATCTCCTCAATACGTGTATTTCCCAATCCAACTACATATTCAATTGCTGCTTTAAT
CATTTTTCATTTCCCCTTTTCTTTTTTTAGTTAGTTGATTGTTGACGTAAATCTACAACT
TTATCGCCTACATCATTTTTTATTACTTCTTCACCTGGATCATAAAAGGTTTGTCCAATT
ACTCCAGAAACAAGTTCTTGTCCTACTAAATTACCTTCATTGTCATAATCCATAACAATT
TTAGATTCAACTTCTGTTGCAGGAACTAACGTTGTTTTAGCTTGTACCTTACAATTCAGT
ACATCTCGTTGCTGATCACCTGCTACTGCAATCGTAATATTAATTTTCCTTACCTTTTTA
GGGTCGGTATTTGGGTCTGCAATGTTCTCCAAAACCTTCTTTAATTCAATATTTACTCTT
TCAAATAAGGCCCCATCTGCAAAACTATTTAAGTCAATCATCTTTCTACCTCCTAAGCGG
TTTTACTACCGTTAAATAACGGGCGCCATCCTTCTATAAAACTGAGAGCTTCCCCAAAAT
CCTTTTGAAGTATATTAGGATAAGCATTCACTTGGTAAGCATCTTTTAGGTTCTTCCATA
AAGCGGAGTACACTTTTCTTGTTGTAGCGTACAATTCCTTATCTATCTTGTTTTCATTCC
ATAGATTATGTACTCGTTTATTTACAGCGTTTCTAATTACTTGCTGCTGTCCATAATCAA
GCGTGATACGTTTATCTATATCACTTCTCATTTTCTCTACATCTTTTTTCAGACTATCGA
CTTCTCCATTTAACTCAATAGTCATTTTCATATTGGCCAGGATACTTTCTTTTGCGTTCA
TCGCTTTAGGTTTGCTGCGAATATATTCTTGCATCCTTTTAAACTCTTGAATAAACTTAA
TCTTCATTTGAACAGCTTCTCTTGTGTTGTAACTCATAACAACTAATGTAAAGGCTTCTT
CTGTCATATCAATTTTCGGATAATAACGTCCTCTGCTCTCATAAGTTCGCTCCGCAAAAT
TGCTTAGTGAAAATTCGTAACCTGCATATTCCATTTGTTTTCTAATATCTCTTAGTACGT
CAGCGTGATTTTTACAAAACACCTCAGCAATCGTTAAACTATTTGTTACTGCCTTTCCAT
TAACTTCAAATACTAACTCAGCATGTACTGGCGTTTCATTTACTGCTGCTAATTGATCCA
TTTTACTCTCCTCATCATTCGTTTTTTGAGACGTCTCATTTAGAGACCTGAAAGGCAAAA
AAATATACTACTTCATCAATTCATCGATGGTTACTTCATACAGATTAGCTAACAAAGACA
ATCTATGTAAGTTAGGTTCACGTTTTCCTGTTTCTACTTGAGAATATGAATTCCTATTTG
TGTAACCTATTGTTTCAGCTACTTCAATCTGTGTGAAACCTTTAGAAAGTCTAAGTTCTC
TGATCTTTTCAGTGTTTAATTTCATTCGGTATCACCCTTTGTTCGTTTCGTTAAATTGAG
TATATCACAAGAGGTCTCTTTTTGAGAACCCCAAAATTATAAAAAATAAAAGTTTTTAAA
AGTGTTGTCATTTCGAGAACATATTTGTTAAATTTAAGATATAGGAAATGTATTTATATA
ATTATTTTTAGTGTTAGTAAATAAAAATTACTAATAAATATTAAGGGGAATATAAAGTAT
GGATTACAAATTAATTAGTAGACGTGTGAAAGATATAAGAACTGACATACTGCGAATTAG
TCAAAGGGAATTTGCTGAAGCTTTAGGGATACAGAGTAGATCAGCTGTTTCGATGTGGGA
AAATGAAGAGAGTACAAAATGCCCATCTAAAAAGATGAGCTTAGAAATTGCAAAACTTGC
TAATGTATCTGTTTCTTATGTACTAGGCGAATCAGATGAGAAGAACCCTGACGTCGCTGC
AAAAGACGAATGGGAAAGACTTATGATGCAAGTTAAAACAAAATCACCTGAGAAGCAAAA
AGAACTTTTAGATCTTATTACTAACTTAGTTAAGATATCCGGCGATTGATAGCTTTAGTT
GCTACCAACCGCTTTTTTTATTTCTGCTAGTATATCAAAAGATACTGAATCCCCTTTCTC
AGCACTGTTCATTACTTCTTTTAGTACGTCCCCGAATTTATCTACTACAGTTTTATTCTC
TAATTTCTCCATCCCTAAATCCTCCAATGTAATCTTTATAGTTTGTGAATCATTCACATA
CTTTCGAAGTTAGCTTTTCACAATAAACTTCGAACGCCCTCTAAAATCAAGAAATGCGAT
TACCCCTTTTGGATAATCGCAACTCTACATTTTATATTAAATTTTACCAGCCTCCGCCAC
CTGGTTCGGACATCATAGCAACTTTAGGCTCAGACATTGTATATTCTTTTTGATCTATCT
TGTAATTAATATTAAAAGTAATCATACCCACAAAAGCTAATATTGGGAGAATCATTAAGT
ATTTCTTCAATCAATTCACCTCTTTCACATAAGATTATTATACCATTTTTTGAATATTAA
CCCAAGTATATTTTAGGGAGATTTGCGTAAAAAAGGCTCTTTTTTTCGATAAACATTCTA
TGTGAGATTTCGATTAATTCTCGGTCATTTCTTGCTAAACCTAAGAAGAGTGTCTGAAAC
TCATTAAGATAACCTTTTGTTTCTTTCATTTTCAGTAAAATAGACTCTGACGCTTGATAG
TTACCTCTCTTAAATTCTAAATAAGCTTGATCATCATCATCCAAAATATCAGGCAATGTA
TCTAAGTCTCGGTAATGATGAATCTTCAAGAAAATGATTGTGCTTTTTATTCTTTTCTTC
TTTCTTTCTATGTCTTTATCACCTTCAGAGAAATTTGTTTCCAGAATTAAAAGTGATTGT
TCAAGGTGAAATTTCGCTCGTGAATAACTTTCAAATAAAAAAGACTCTCCGATATTATAT
AAAGAATTGGCTTTTTGAATTATAAAGGCAGGATTTTTGTCGCAAATTTCTAATAGATCA
TTACAAATAGCACGTGCCAAATCAACTTTATTTTGCATCATATAAGTTACAATTAAACCC
TCTTTAATTCTTGCTAAGTAACTATCACGTTTGTAATTGTTAAATATTTTTTTAACTTTA
GTTTCGACAGGAGTTATACGCTTGAATAACCTTTTATATTCTTTCATTTGGTATAAAGCT
TGGCACATCAAAATACTAGTTAGGATTTTCATCTCATTTGTTGTAATTTCATTTTTACAC
GATTCAAGATCATCATAAAAATCTGCCGGTTCATATTTTTCATTAACTTTAAAATGTGTA
TATATAATATCATAAACCTTCGCGCACTCTTTGTTAGCGATTGTTGGAGAATTTTTTTCT
GACTCTATAAGTTCTTTCAAAGAATCGAATTGTCTTTGAAATGCAGCATATTCAAAAGCT
TCCCGTTTATTTTCCGGTTTTGCAAATGCTAAATAGTCGGATATCATCTGTTCTTCCATT
GATACAAAAGATTTATCATACAGTTTCATAATGATCTTTACTAGATAAATAAAACTAATT
TCTGTTTTTCCATTTAGTATGCTTGATAAGGTACTTTGAGCTATTCCTAAATACAAAGCT
AACTCACAGTTAGTAATTTTAGATGCGAATAAATCATCATTGATTTTTTTTAATAAGTTC
TTCATAGTTTGCTCTTTTGTTTTTACTATTGTACTTTCTTGCATCCCTTTTGCTCCTCCC
ATTGGAACAAAGACTTCGCTCGTTTTCTCAACTTTTTTAAAGGAAAAATAATACCACAGT
AATGATTTAGTAATATCGGCATGTTATAATGTAAATGTTACTCGTGTAGTGACCGAAAAG
AGACTTATGGCAGATGTTCCCCTCGTGAGTCGGGCGAACGGTGTAAGAGTGGGCCAAATC
ACTCTTACACACGCTGTGAGTCTTTTTTTCGTTCCGTTTTTTATTGTTATCATAATACCA
CAAATTTCCCAAAATTCTGTCGTATAATAGTCTGAAAACTATTGAGAAAATTGAAAAACC
GCTTTGTATCAACGTTTTATGTATTACATGGAATAAAAAATGCAATTATGCATTTCATCG
TTTTTTGAACCTGTATGAATATTTTACCACAAATACGAACTCTCGTTCCTTTTATTTCTA
CACAGACTCATAATGAATCTTCACATAACATAAAGGTCACATAATTAATCATACCATTCG
AATATATACCATTATTACCACTCGTTCGCTTATAATTGTCGAAGATTATAAAGGGCGGTG
AATAGTCATTGCTTAGCGAACGACTAGTATACTTTCGCAAGAAAAACAAATTAACACAAA
ATGATGTCGCTTACCGTTTGAATGTTGTCCGTTCAACATATACAAACTGGGAAGCAGGAC
GGTCTGAACCAGATGTATCAACTCTCATTAAACTTAGTGATATATACAATGTCAGCCTCG
ATAACCTAGTTGGCAGGACATATCGAATGCCTCCACAGTTCGAAGTCATTTTAGATCAAA
TATCCGATTTAGATACAGAACCTAAAAAGAAAGCGCTCAATCTTTTAGTCGAATATACTT
ACTTAATTAAAAAGTATTTCATGTAGCTATCACACCTTTCATTTTCGCTTGTAAGCAATT
TTAAATTCAGAAATGATTAAGTCCATAGAGATAATGTAACGACAAAATTTACAGCCTTTT
AAACTCTTATATTTAAAATCCGAAGCATTGACACCTTAGAGAACATTACGCTCTCTTTTT
ACATATAACCCAAAAATGTAACTATTTGGATTGTTGCATTTGAGTATATAGTACATTTGG
ATTTTAATATAGACTAGCGGTAAAATATTCTTGTAAAGTCAGAAATTAGTGAATTTTTGA
CTATTTCCATTGATTTTATGCGGTTATTCGGAAATATGCAATATTACATATCCATTAATT
GTAATGTAAACCATGTTTTACTCGTATCAACCAACTCAAGGAAATGCTATAATCCGCTTT
GACTAACTGCTACGAAAGCTCATGCCATTGCTAACGTTTGCAGTTTATCATCCACAACTA
GGGCGACTCCCTAGATTGCGGTACCATTCCGCAGCCCTTAACAATTTGTTAGGGGCTTTT
TTCATTTCTGTTCGACAAAATATGACAATATTATAATTAAATGTTTGCTATGATAAGCTC
GGAAATCTTACATTTTACATAACTGGAGGTAATAACATGTATAAGAAACTTGGTACCTTA
GCTTTAACAGGCACATTAGCTTTAAGCTTAGCTGCATGTAGCGAAACTGAGGAAACTGCA
AAAAAAGTATCTAGCGACCAAAAAACTGAGCAAACAGATACTAAAAAAGAAGATAGCAAA
GAGTTTAAAGTTGGTGAAACGATTCAACTAGGAGACTATAAATTAACAGTTTCTAATGTT
GAAAAATCCCAAGGTGGCGAATTCGACAAACCTAAAGAAGGACAAGAGTTTATAATTGCT
AACTTAACCATAGAGAATGGCGGAAAGAAAGAAATCAGTTACAACCCATTCGATTTTAAC
CTGCAAAATAGCGAAGGTAACATTGTAGACCAAGCGTTTACAATGGTTAATGAAGAGACT
CAATTGAATTCTGGTAAATTAGCTCCAAACGGAAAAATCACTGGAACTATTGCTTTCGAA
ACAAAGAAAGATGACCCGAAGCTCCAATTAATCTTCAAACCCAATTTTTTATCTAAAAAA
GAAGTGAGAATTAATCTACAATAATTAAATAGGAGTGTTTATTTTGAAACGAACAACTGA
ATTTGTATTAGGACTTATTGGTGGTATTTTTGGAGTATTAGGTGCTGTTTTAGCTTTAAT
GATAGGTGGAATGGGAGCAGCATTTGAAGCTGAAGGAGCTGATTCTATTATCGGGTTAGG
TTGGGCTGCGGTAGGTCTATCTATTTTAGGAATTGTTGGATCTATAGTCGTGAGAAATAA
AGCCAAAGCTGGCGGTATCATGATGACAATCGCAGCAATCGGAGGATTTATTTGTATCTT
CGTATTCTATATCTTACCAGGTATTTTATTATTAATCGGTGGATTAATGGGAATCTTCCG
TAAAGATAAGGCTTCTGCATCTGCATAAAATGAGCACTCGAAAGAGTGCTTTTATTATTT
CTCAATGAATAATATAGATAAATATGGTAAAATAGGAATTGGGTAGTATTCTATTAACTC
TCTCGTTATTAAAATTAAAGTGGTTATCAAGTCGAAGGAAGGCACCTTAGGGTGTCTTTT
CTTTAGGGAATTTATAAATGCTTCATTACGATATAAAGACTCAAATCAATACCTTTAGGT
GTGAAATAATAAATTCAACTTGTGGATATCCTTACTTATCCACAAAGAAGACCGTCATTT
ATTTGACGGTCTTCTCTTTTACTCTTCTTTTTTCAACAAAGTTCTGCTATCATAAAAAGA
GTAGATATATAAATTGCAAATGTAAATTTTTCATATAAATTAAAAAAACAAATAGAAAAA
CCCCGACGAAATTTTCAAAGGTTGATGTAAGTTTGTCCGCCTACTAAACCGATGAAAATT
GGAAACTGGAGATCGAGGTTTGTATGAACATATTTAAAGTTGTATCGCTACGTCTATGAT
AGCATATACTTTAAAAAATGTGAACTACAATCCTCTATTTTCCTATACCCATTTTTGGGC
GGGGTGGAAATTGGAGGATTTTTTATTATGTCAAAAAGCAAACGTGACCGTCGTATTGAT
GGTGAAAAAGCAAGTAAAGATTTATATTTTCAATTGTTTCAGTACTTATTCTATGAACCA
AAATATAGAAAGCTAGATAACAATGCTCGTGTCTTATATTCTATTTTACGTGATCGTTAC
AAACTATCTGTTCAAACTTCACAAAGTAAAGATACATACGTGGATAACGAAGGATATATT
TATTGCATCGCTGATAACACTGAGCTAAGTTATATGCTTATGGTATCAGAGCCAATAGCT
ATCAAAGCTAAAAAGCAGCTTCATGATGTGGGCTTATTGGACGAAGAACCTGTAAAAGAT
GGCGCCAATCGTTTGTATGTATTAGAACCAGAATTAACAACTGATAATTGGATGTATAAA
GCTGAAATAGAGGATCTACGAAAAAAGAAAAAGGCAAAAAAAGAGGAAGAAAGAAAAAAA
CGAAAAGAGAAAAAAGCATCTGAGAAAGCAAAAAAAGAGGAAGAAAAAACTCCACAACCA
GTTGGTGACTTAAAAAACTTAAGTCACCAGGAAAATAGGGGTTCATCCGAAAACGGTGAC
TTAAGAAATTTAAGTCACGTGACTAAAGAATCTTTAGCGTATACAAAAGTATTTAATATA
CAGAACGATTTTAATTACTTTAGTAAGTATGTAGGTAAGAGTATCCCTAATCTCATTATT
AATTTTTATAATCAATATTTCAAAACAACTAAGTACGCAAAAATTGAATTAACTAAAATG
TGTGAAGAAGAAAATGCAGTATTAGTATTCGAATCAATTAAACGTGCTATTGATGGAGAA
GCAGATAAACCTATTGCATACATAAAGAAAACTATCGCTAATTGGAATGCTGATAATTGC
GAGACATTAGAAGATATTCAAAAATACGAAGAAAAACATCGTAATAAGAAAAATCAAAAT
AAAACTAAGGGCAGCTATACTCCTAAAAAGAAAACTGTACGTAAAGAAATGGTTCCAGAA
TGGGTTGGCGAGGAAGATACTGGATCATCAACTATGGAAGACAATGGACAAGCTTCTGAA
GAAGAGCGTAAACGTTTAGAAGACGTATTAAAGAAATACAAAAAAGATTAATGTCATATA
GGGGATGAATACGTATGCCGAGAAAGTTCAAATTTACTGAAGAAGAACAATTACGATTTG
ATCACTTTGTTACAACAGATGAATTTGCAGAAGTATTAGCTATCGCATGGAGATACGGTT
CCAAACGAAATGACAGTTTCTCAATAAGAAGTCAAAGAAAATGGATTGTTGCTCGTTTTT
CAGAGTTGGTTGAAAGAAGTTGGTCTATAAGATATTGCGAATATGGAGGCGATGAACCTT
ATTGGGAAGGAGCAGTATGTTTAAATCACCCTTTAGTGAACATGCTAGTTGAAATGGGAT
GGTCCCAAGTTACTAAAGAGGAGCGTTCTTTTCCGATAGGCGATTTTAATGAACTAGTGT
TCGTAAAGACTTTTATTCTATTATTACACGATTTAGGAACAATTCGAGAAAAAAGAAAAG
GTAGAATGATAGTCCGTCCACGATTACGAATTCATGGATCAGTTGATGTATTAAACAATA
TTGGTCGGGTCCTCAACAATGAATTAAATGTTGGATTTAAAAAATTGCAAAGTGATCAAA
AGGTTCCAAGAGCAAAGACAGTTTATTTTCAATCTAAATTTGAAATACCCAAGATTTTAG
AATTTGTTGGAGCTGTAGAATCCTTAGATAAATTTAATTCGCTTGATCTAGGATCTAGGG
AATTAATGAGAGTGTGAAATTTCACACACCGTACTATTTTTATATCTTCTAAAACTCAGT
ATATAGGGGATTTTAAGGAATATTAGGGAGGACAAGCTTATGGCTTCCCTACCTTTCTAC
ACGCATTTTATAAATTTAGCGAAGCCATTGCGAAGACTAACGACCTCGCAAAAAGTACAA
ACCAATGGTTAATCAATTGTATTTTGTTGTTTTTGGCATATTTTATTGAAACCTAGCGTA
AATATCTGTTAGAATCAAAATACCAATGATTAATCAATGGTTATGAAAGGGGAATGTATA
TGTTATTAGGAAATCCATACGCGATTGACTTAGGAAATGGCTTTACAAAACGCGCTTCAA
AGAAAAATAAATCACTAGAGGCAGATGTTATTACAGAATTATCTGTGTTGGCTCCTGTAG
ACGACTACTACAATGAAGCTAGTTTCACGAAAATTGAACTAACAAACACTGACTTCCCAT
ACTACATAGGAGAAGAAGCTAGAAAATCCAAACTACCATTAATCCGTGCCCTTGGCGAGA
ATAAAGCGAAGCGCTATGAGGATCCAACATTTAAGAAGCAATTATTTGGATTCATTGCAA
AAGACTTTAAAAAGAACGTTACAATTCCGTTACTTGTTACAGGTCTTCCAGTATCACACT
TTGGTAATCAACGTGAATCGATTCAAAAAGTAGCTATGGAAGAAACAGCAGTAAAAGTAA
ATGGCCAGTTAATCACAATTAAAGTGAAACAATGCTTAGTTATTCCGCAACCCGTCGGCA
CTCAGTATTACTTAGTGAAGAAAGAAATTATTAATAAAGAAGATCGTATTCTTATTATCG
ATGGTGGGTTTGGCACATTTGATGTTACTGATATGTCTGGTAATGCTGTTATTGATCGTT
TAGGAACTGAATTAGGCTGTGAGAAAGCATTTATGGCTATTGAACAAATCGTTCGCGATA
ACATTGGTGAAACACCTGATTTAAGCGTGTCGAACATGCACTATATTCTTGAGAATGGCT
ATAAGTACAACGGCTCTCTATACGATTTATACACTCATAAAGACGTAGCTGAGAAGGTTG
ATGAAGAGTTACAACGTCATTTTGATGCAGCATTACGTGAAGTTTCTCAAAAGTTCAACT
TAGCTGTATACGATAAAATCGTCTGGACTGGTGGAATGGCTGCTCTTCATAAAAAGCGTA
TTGAGAAGAAAAAAGAGCAATTCCCAACATTTGCGGTTCTAGAAAACGGTCAAGAAGCTA
ACCTATTAGGATACTACTATTTAGGATGTGATGTCTTTGACAAACTTACAAAAGAAAAAG
CTTCAAATTGAGCTAAATCCAAACAATGACAAGGTTCTGTATAACTTCGTAACTCGATTA
GAGGAACAAGGTAAAGGACAAAAAGGGTATGTAAATAAACAAATTAAAAAGAGATTAGAA
ATGTACCAGGTACTTGCTGAAGTTGCAGGAGAAGAAGATCCACTTCAATTAGTTAAGAAG
TTACTAATCAATATAAATACTCATGGCATACAGAATGATGCAGGAGTAGATGAAAAGCCT
TCTGAAGAAGTCGTTGATAATGCTATGGATTTACTAGCTAATTTAGATAAAAGCTTTATG
TAAGAAAAATTTTACTCCTTCCTCCCTCCTCTCAAAAACAGCAGGAACGATAGCATGTTG
GAATTATGTCCCTGAGAATACAGAGGGGGGAGGAGGTTGAATTTGAAAGGGGAGAGCATC
ATGAGCAATGTTAACCCTATGTTTAGTTTTTCTAGAAAATCTACTACAATAACAAATCAA
CAACCTCGTAAAACTCGTTCTGACAAAAAGAAAGATGTAAAAATCCCCGTAAATGAAATA
CAAAGACAATTAATAAGATCTTCAGCGTTCCAACAAAATATAACTACTACACAATACATG
TCTAAATTGATCACAGAACATCTCGGAATTGATTATATTAGTGAAATACATGCGTATGAA
TATAAGGACACCAAAAAGTACATTCACGCAAAATTGGAGCAAGGAGCGCACTCTAAGCTT
GTCCAATTAGCGATTGAATGGGGAGTTTCGCAAAGAGCAGCTGCAACACGTATTTTATGC
TTTGCATTACGCACCATGTAGGGAGTGAGCGCATGTATAGTAAATACGACGTTATGACGA
AAGAAATACAGCTTATGAGTGCTAGTAATTGGTGGGAGCGAACGAAAATTGAATGGAAGT
TAAAAGAGAAGTACCGTTTTGAAGTGAAGATGCTCAAAATTTACTTATTTCGAATGAATA
TTATTATCGAAGATATGGAAGAGGAAGATTACGAGTGTAATGCTAGTGATCTAGCTGAGA
TACTTGTTGAGGACTTTCTTGAACATATACGCTCTAAAAATAGTATGGAGCAGCTGTATC
AAATCCTAGAGAGCAAGAAACATTATACGGATTTTAATTTGGAGTTTAATGAAAATGACG
ATCGATACGGTACAATTTCTGTAAAAATTGATAGACGGATATTAAGACGAATTGAAGTGT
TTTTTTCGGATATGGCTCATAGTTTCCCTATGCACGGTTTTACAGCTGAAAAATTAATCA
ATATTCTGATGTGTGACTACATGCGGTTTTATGCTGAAGAACCAGGGAAGAAACTATCTT
TGTTGAAGCGAAGATTTTCATAGTGTTTAAATTTCCTATTTTTGAGATGTTTAAAAAATG
AAATCTTTGACCACTCTTGTACTAAGAATTTAAAACAGGAGTGATAAAATGGGATGGCTT
ATTTCTGGTAAAGGGAGAAAATCGAAGCTCTCCAATTTTCTGGAGAAAAACAAAATTACT
CAACAGGAATTAGCGGAAAGAAGCGGGGTAAGTAAATCGACTATTAGTCGTGTATGCCAA
GGAGATAAATTTTCGCCAACCATGAAAAATGCACAAAAGATTATAAAAGCATTGAAGAAA
TTAACTAACAAAGATGTACATTATGATGACTTTTGGATGTAGCTCCGTTAAAAACGGGGC
TATTTATTATTAGAAGTAATTATTTTGTTTTTGGACATTTTTTTACTATAAAAAAATGTT
AGGGTAAAAGTGTCAGTCCGTCCTAACAAATTTTTAAAAATTAAAACCCCTTAAATACAG
GTTATAAATGAGCAAAAAAGTAAGAGTTTGGACCCCAACTTCAGCGTACATATTTTACTA
TCATAATTAATATAATTCATCTCTTTATTTTTGTTAGGATGGCCTAACAAAAGTCCCCTC
AAAAAAAGGGGGAATGTTCGTTTTCCTACTGTATGTTATGATGGATTTGCGGTTCTTATT
TGTTCAACAAGCCAAGTAGAATTACCTAAATCGCACACTTTCTGAATGTAGCACATCCTT
ACTACTCATAAGGTGTGCTCCGCCTTTGTATAAAGATAAATAGGAGGAGATAAACGATGC
GTGATGTATATCCGGTCAAATATTATAGCAAAGAAGGATTTGTAGAACGAAAAATAGAGA
TTAACGAAGAAGATTTACAGAAAATCATTGAAGATTATTTAGATAGGCATGCAGACTTTG
ATTTTGATGAACTTGAGGTTGTAAATAACCGTCCTATGAATATTTGGTTATACGCAAAGT
GTAGAAAGTATGTAGATGAAGAAAATCCTGAAGATGATCAAGCTGTACATGAAGCAGAAT
TGGAAATCACAGGAGATTATGACGGAAATGGTATATTTTAAAGGGGTACGGAAACGCTTC
CTTTTTTGGGGGTCACTCACAAAGTATGAATATATTTAAGCATTGTATTGGGTCATTGCT
ATACATACCTCGTATTTTATAAGAAAAAGGATACGTTATTTGATTAACGTACCCTTTTTT
ATTTTTTTCTATATTTTTCTTGCTCATAGATACTGGCTGCCATTCCAGCTCGGAATAAAA
TAAATGCTCCATGAACTACTAATGGGACTACGCCACCATTTGTTTTAACTTACTTTACAT
ACACATAGGCTTCACTTGCTGTTACATAGTATGTTTTATTTTTCAAACTTCACATATTCA
CCAGAAACCCATTGGTCGCCGCCAACATTATACCAACCGTCTCTATATCCCCAAGATTGA
TATCTTTCACTTTGGTACACATTTTTTACGACACCATAGTTAGTTCCTGGACCAGTACGA
ACACGTAATACATCAGCTGTAATAGTTACTACACCAATGCCATCATTTGAAGGTTTAGAA
GGAGCTGGTGCATTTTCTCCTGTATAACGAATATATGATGAATCATTATATACCCACTGA
TCGCCACCCAAGTTTAGCCAACCATTTGACTCACCCCATACTTGGTAGCATTCTCCTTTA
CCTAACTTACGAATAACTGCATATCCAGTTCCAGGTCCTTTTCGTAAATTCACGTTATCG
CCATTAATGTAAGCAACTTTTGTACCATCGTTTGAAGGTGGAATAGGAGTTGGCATTACT
GGACTACCTCCACCGTTATATGCATTTTGGACTCTTTCAATAAAACTATTCCAACGTCCT
TCTGCTAACATACGATGAGGACAATACTTTCCACTCCATGATTGATGTGTGCGAACTTTA
CTAATTGGAATATTGTACTGTTTCATGAGCCCAGCTACGACGATAGCTGCATTATCCTCC
GCTTTATAATATCGATCTCCACCACTTAGAGAGTAACAGATTTCAACTCCAATAGATTTA
CGATTTCCGTTACCGCCACCATCACCGCAATGCCAAGCGTTACGCTCTAAAGGAATACCT
TGTACAGCTTCTTTATCGTCTACCGCAATATGAAACGATACTTGGTTATCATTACGAATC
ATATAAGCCACTTCGTTATTTGCTGTAGCATCGTTATAAGTATTGTGGACAGTAATGAAT
TCTGGATTCATTGTATAAGGGCACTTAGTACCATATTTGCTTGCATCAACTAAATTTTTT
CTGATTTCCATTATTAAACATCTCCTTTTAGTGTAAGTCATTTTTTTCTAATACATTTTT
TTGTTGTAATCCTTTGTTGCTCAAATAGTTGTTCTTCCACGCCATATACAAAGTGAATGC
TCCTGTAATTACAGCAACTAAATCATTTGTCATTTTGTCATCAATCGTTTGGTATCCCAC
AAGATTTAAGACACTATTAATCACAGCAATCACTAATACGACATAGCGACTAATTGAAGC
TGCATCAAAGTTCCTCATACTCTCACCTCCTCCAAATAAAAAAAGTGACCGTATATACGA
TCACTTCCCTGCGAATTTAAAAAGAGCCATTATCCCACCGGTGATAATAGCCCCAACTAC
TGTAGTACCAATCCAAAACACTAACTTATCTAATCGATCAATTCTTAAATGAGCACTTTT
CGCTGACTGCTGCGCTTCAATTGCAACATCCTTAACATTACCAAGTGTATCTAGTTTGGT
TTCCACTCTGGTTAATCCAACTAATAATTCTTTAAAGTCATCATTTTTTTGTTCTGACAT
TTATTCAGCCTCCTTTTATGCTGCGAAATAACTTGGGTCCATTCCAAATATCTCTGCAAT
ATCTTCTTCACTTCTATCCTTCAGATAAGATTCAGTCGTTGAAATATCAGAATGATTAGC
GAGTGATTTTAATTTTTCAAGTGGAACACCTTGTACTTTTAAATTATCTAATCTGCTATG
GCGGAAACAGTGAGGATTCATTTTAAATTCCTTCCCTTCCTTTTTGTTCAGCATCTTAGC
AAATATATCGCACCAATAATTAAATACACTCTTGTTCAATCTCTTTCTCTCACCATTCTT
ATAC

Region Details

Region	1
Region Length	16.7Kb
Completeness(score)	incomplete(30)
Specific Keyword	lysin,recombinase
Region Position	66-16809
# tRNA	0
# Total Proteins	27
# Phage Hit Proteins	26
# Hypothetical Proteins	0
Phage + Hypothetical Protein %	96.2%
# Bacterial Proteins	1
Attachment Site	no
# Phage Species	1
Most Common Phage Name(hit genes count)	PHAGE_Bacill_Waukesha92_NC_025424(26) PHAGE_Bacill_BMBtpLA_NC_028748(21) PHAGE_Bacill_IEBH_NC_011167(7) PHAGE_Bacill_phi4J1_NC_029008(6) PHAGE_Bacill_250_NC_029024(5) PHAGE_Bacill_vB_BtS_BMBtp14_NC_048640(4) PHAGE_Bacill_vB_BtS_B83_NC_048762(3) PHAGE_Bacill_PfEFR_4_NC_048641(3) PHAGE_Bacill_PfEFR_5_NC_031055(2) PHAGE_Bacill_BceA1_NC_048628(2) PHAGE_Paenib_Vegas_NC_028767(2) PHAGE_Brocho_BL3_NC_015254(2) PHAGE_Aeriba_AP45_NC_048651(2) PHAGE_Staphy_SpaA1_NC_018277(2) PHAGE_Lactob_iLp84_NC_028783(1) PHAGE_Bacill_SPO1_NC_011421(1) PHAGE_Geobac_GBK2_NC_023612(1) PHAGE_Bacill_Nemo_NC_031070(1) PHAGE_Bacill_vB_BanS_Tsamsa_NC_023007(1) PHAGE_Bacill_phiCM3_NC_023599(1) PHAGE_Bacill_G_NC_023719(1) PHAGE_Bacill_Kida_NC_031012(1) PHAGE_Bacill_BtCS33_NC_018085(1) PHAGE_Bacill_BMBtp2_NC_019912(1) PHAGE_Geobac_E3_NC_029073(1) PHAGE_Bacill_phBC6A52_NC_004821(1) PHAGE_Bacill_TP21_L_NC_011645(1) PHAGE_Bacill_SIOphi_NC_042133(1) PHAGE_Clostr_phiCTC2B_NC_030951(1) PHAGE_Clostr_phiCT453B_NC_029004(1)
First Most Common Phage #	26
First Most Common Phage %	96.29%
GC %	34.14%

Region:	The number assigned to the region.
Region Length:	The length of the sequence of that region (in bp).
Completeness:	A prediction of whether the region contains a intact or incomplete prophage based on the above criteria.
Specific Keyword:	The specific phage-related keyword(s) found in protein name(s) in the region.
Region Position:	The start and end positions of the region on the bacterial chromosome.
# tRNA:	The number of tRNA genes present in the region.
# Total Proteins:	The number of ORFs present in the region.
# Phage Hit Proteins:	The number of proteins in the region with matches in the phage protein database.
# Hypothetical Proteins:	The number of hypothetical proteins in the region without a match in the database.
Phage + Hypothetical Protein %:	The combined percentage of phage proteins and hypothetical proteins in the region.
# Bacterial Proteins:	The number of proteins in the region with matches in the nrfilt database.
Attachment Site:	The putative phage attachment site.
# Phage Species:	The number of different phages that have similar proteins to those in the region.
Most Common Phage:	The phage(s) with the highest number of proteins most similar to those in the region.
First Most Common Phage #:	The highest number of proteins in a phage most similar to those in the region.
First Most Common Phage %:	The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins.
GC %:	The percentage of GC nucleotides of the region.

Intact (score > 90)

Questionable (score 70-90)

Incomplete (score < 70)

Region:	The number assigned to the region.
Region Length:	The length of the sequence of that region (in bp).
Completeness:	A prediction of whether the region contains a intact or incomplete prophage based on the above criteria.
Score:	The score of the region based on the above criteria.
# Total Proteins:	The number of ORFs present in the region.
Region Position:	The start and end positions of the region on the bacterial chromosome.
Most Common Phage:	The phage(s) with the highest number of proteins most similar to those in the region.
GC %:	The percentage of GC nucleotides of the region.

Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:

If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.

Method 2:

If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).

Method 3:

If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
If the size of the region is greater than 30 Kb, the score will be increased by 10.
If there are at least 40 proteins in the region, the score will be increased by 10.
If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.

Compared the total score of method 2 with the total score of method 3, the bigger one is chosen as the total score of the region.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.

gi|00000000|ref|VLPP01000096.1| Bacillus thuringiensis strain PT18 gnl_MG_PT18_96, whole genome 16809, gc%: 34.11%

Download details as .txt file: detail.txt

Hits against Virus and Prophage Database

Hits against Bacterial Database or GenBank File

Region 1, total 27 CDS

#	CDS Position	BLAST Hit	E-Value	Sequence
1	complement(66..422)	PHAGE_Bacill_Waukesha92_NC_025424: hypothetical protein; FPG93_28975; phage(gi712912379)	4.53e-84	Show
2	complement(442..825)	PHAGE_Bacill_Waukesha92_NC_025424: hypothetical protein; FPG93_28980; phage(gi712912380)	1.50e-91	Show
3	complement(794..1297)	PHAGE_Bacill_Waukesha92_NC_025424: hypothetical protein; FPG93_28985; phage(gi712912381)	1.36e-120	Show
4	complement(1443..1772)	PHAGE_Bacill_Waukesha92_NC_025424: hypothetical protein; FPG93_28990; phage(gi712912382)	3.76e-73	Show
5	complement(1762..1941)	PHAGE_Bacill_Waukesha92_NC_025424: hypothetical protein; FPG93_28995; phage(gi712912383)	7.34e-18	Show
6	complement(1941..2648)	PHAGE_Bacill_Waukesha92_NC_025424: hypothetical protein; FPG93_29000; phage(gi712912384)	3.52e-174	Show
7	complement(2672..3046)	PHAGE_Bacill_Waukesha92_NC_025424: hypothetical protein; FPG93_29005; phage(gi712912385)	1.26e-84	Show
8	complement(3058..3786)	PHAGE_Bacill_Waukesha92_NC_025424: putative rha family phage regulatory protein; FPG93_29010; phage(gi712912386)	0.0	Show
9	complement(3853..4050)	PHAGE_Bacill_Waukesha92_NC_025424: repressor protein; FPG93_29015; phage(gi712912387)	1.52e-40	Show
10	4264..4614	PHAGE_Bacill_Waukesha92_NC_025424: transcriptional regulator; FPG93_29020; phage(gi712912388)	5.95e-79	Show
11	complement(5102..6289)	PHAGE_Bacill_Waukesha92_NC_025424: hypothetical protein; FPG93_29025; phage(gi712912391)	0.0	Show
12	6854..7171	PHAGE_Bacill_Waukesha92_NC_025424: transcriptional regulator; FPG93_29030; phage(gi712912392)	2.79e-71	Show
13	7782..8309	PHAGE_Bacill_Waukesha92_NC_025424: hypothetical protein; FPG93_29035; phage(gi712912393)	2.23e-122	Show
14	8329..8673	PHAGE_Bacill_Waukesha92_NC_025424: hypothetical protein; FPG93_29040; phage(gi712912394)	2.84e-69	Show
15	9273..10376	PHAGE_Bacill_Waukesha92_NC_025424: DNAD domain protein; FPG93_29045; phage(gi712912395)	0.0	Show
16	10400..11062	PHAGE_Bacill_Waukesha92_NC_025424: hypothetical protein; FPG93_29050; phage(gi712912396)	1.64e-161	Show
17	11345..12376	PHAGE_Bacill_Waukesha92_NC_025424: hypothetical protein; FPG93_29055; phage(gi712912397)	0.0	Show
18	12336..12668	PHAGE_Bacill_Waukesha92_NC_025424: hypothetical protein; FPG93_29060; phage(gi712912398)	1.43e-71	Show
19	12786..13166	PHAGE_Bacill_Waukesha92_NC_025424: hypothetical protein; FPG93_29065; phage(gi712912399)	1.58e-90	Show
20	13178..13708	PHAGE_Bacill_Waukesha92_NC_025424: hypothetical protein; FPG93_29070; phage(gi712912400)	5.05e-127	Show
21	13794..14027	PHAGE_Bacill_Waukesha92_NC_025424: DNA binding protein; FPG93_29075; phage(gi712912401)	6.26e-51	Show
22	14462..14746	PHAGE_Bacill_Waukesha92_NC_025424: hypothetical protein; FPG93_29080; phage(gi712912402)	3.76e-63	Show
23	complement(14884..14988)	class IIb bacteriocin, lactobin A/cerein 7B family; FPG93_29085	0.0	Show
24	complement(15041..15976)	PHAGE_Bacill_Waukesha92_NC_025424: endolysin; FPG93_29090; phage(gi712912403)	0.0	Show
25	complement(15993..16223)	PHAGE_Bacill_Waukesha92_NC_025424: SPP1 family holin; FPG93_29095; phage(gi712912404)	1.51e-48	Show
26	complement(16266..16505)	PHAGE_Bacill_Waukesha92_NC_025424: peptidase; FPG93_29100; phage(gi712912405)	2.46e-50	Show
27	complement(16521..16809)	PHAGE_Bacill_Waukesha92_NC_025424: site-specific recombinase; FPG93_29105; phage(gi712912406)	1.42e-64	Show

Click on a region to see details.

Intact (score > 90)

Questionable (score 70-90)

Incomplete (score < 70)

Viewer Options

Length: 16809 bps

Phages: 1

Click on a region in the genome above to show details here.

Click on a sequence to see details.

Lysis

Terminase

Portal Protein

Protease

Coat Protein

Tail Shaft

Attachment Site

Integrase

Phage-like Protein

Hypotheical Protein

Other

Transposase

Fiber Protein

Plate Protein

tRNA

Download data as .txt file: png_input