Submission Results

Sequence Name: Not Available

GenBank Accession Number: VRTV01000001.1

GenInfo (GI) Number: 0000000000

Download Results: VRTV01000001.1.PHASTER.zip

gi|00000000|ref|VRTV01000001.1| Bacillus amyloliquefaciens strain FUA2153 1268615, gc%: 44.71%

Download summary as .txt file: summary.txt file_download

Total: 5 prophage regions have been identified, of which 2 regions are intact, 1 regions are incomplete, and 2 regions are questionable.

RegionRegion LengthCompletenessScore# Total ProteinsRegion PositionMost Common PhageGC %Details
137.9Kbquestionable7029296259-334181 info_outlinePHAGE_Bacill_SPbeta_NC_001884(9)36.11%Show info_outline
232Kbintact13042386001-418091 info_outlinePHAGE_Brevib_Osiris_NC_028969(9)46.38%Show info_outline
3131.2Kbquestionable80173795782-926991 info_outlinePHAGE_Bacill_SPbeta_NC_001884(79)35.81%Show info_outline
444.9Kbintact130471058506-1103471 info_outlinePHAGE_Bacill_phi105_NC_004167(11)42.65%Show info_outline
511.5Kbincomplete30111130621-1142200 info_outlinePHAGE_Staphy_vB_SepS_SEP9_NC_023582(2)41.98%Show info_outline
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Region: The number assigned to the region.
Region Length: The length of the sequence of that region (in bp).
Completeness: A prediction of whether the region contains a intact or incomplete prophage based on the above criteria.
Score: The score of the region based on the above criteria.
# Total Proteins: The number of ORFs present in the region.
Region Position: The start and end positions of the region on the bacterial chromosome.
Most Common Phage: The phage(s) with the highest number of proteins most similar to those in the region.
GC %: The percentage of GC nucleotides of the region.

Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:

  1. If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
Method 2:
  1. If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
Method 3:
  1. If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
  2. If the size of the region is greater than 30 Kb, the score will be increased by 10.
  3. If there are at least 40 proteins in the region, the score will be increased by 10.
  4. If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
Compared the total score of method 2 with the total score of method 3, the bigger one is chosen as the total score of the region.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.

gi|00000000|ref|VRTV01000001.1| Bacillus amyloliquefaciens strain FUA2153 1268615, gc%: 44.71%

Download details as .txt file: detail.txt file_download

Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File

Region 1, total 31 CDS

#CDS PositionBLAST HitE-ValueSequence
1296259..296303attL0.0Showinfo_outline
2complement(296371..297501)PROPHAGE_Mesorh_MAFF303099: bacteriophage integrase; FVD41_01630; phage(gi13470699)4.90e-51Showinfo_outline
3complement(297523..298185)helix-turn-helix transcriptional regulator; FVD41_016350.0Showinfo_outline
4298389..298613helix-turn-helix domain-containing protein; FVD41_016400.0Showinfo_outline
5298803..299765PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_01645; phage(gi9630206)8.79e-59Showinfo_outline
6299802..299936lysogeny pheromone AimP family peptide; FVD41_016500.0Showinfo_outline
7300037..300963PHAGE_Clostr_c_st_NC_007581: putative ParB protein; FVD41_01655; phage(gi80159871)1.71e-29Showinfo_outline
8300965..301147hypothetical protein; FVD41_016600.0Showinfo_outline
9301144..301689hypothetical protein; FVD41_016650.0Showinfo_outline
10301686..302198hypothetical protein; FVD41_016700.0Showinfo_outline
11302208..303263PHAGE_Geobac_E3_NC_029073: hypothetical protein; FVD41_01675; phage(gi985758536)1.22e-42Showinfo_outline
12303496..306483PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_01680; phage(gi9630188)0.0Showinfo_outline
13306811..307029transcriptional regulator; FVD41_016850.0Showinfo_outline
14307617..308093PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_01690; phage(gi9630172)8.52e-42Showinfo_outline
15308093..308806PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_01695; phage(gi9630171)1.39e-61Showinfo_outline
16308830..309615PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_01700; phage(gi9630170)3.41e-90Showinfo_outline
17309624..310211PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_01705; phage(gi9630169)3.03e-91Showinfo_outline
18310211..310438PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_01710; phage(gi9630168)4.25e-13Showinfo_outline
19310473..310946PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_01715; phage(gi9630163)7.85e-30Showinfo_outline
20311364..311546hypothetical protein; FVD41_017200.0Showinfo_outline
21311539..311751PHAGE_Bacill_Deep_Purple_NC_048667: hypothetical protein; FVD41_01725; phage(gi100017)1.47e-16Showinfo_outline
22311835..312242PHAGE_Entero_vB_IME197_NC_028671: hypothetical protein; FVD41_01730; phage(gi966199005)2.42e-05Showinfo_outline
23complement(312259..312822)PHAGE_Clostr_phiCD38_2_NC_015568: recombinase/resolvase; FVD41_01735; phage(gi333798162)3.39e-58Showinfo_outline
24313175..314932PHAGE_Bacill_BalMu_1_NC_030945: hypothetical protein; FVD41_01740; phage(gi100025)2.35e-21Showinfo_outline
25314947..316281PHAGE_Clostr_phi8074_B1_NC_019924: putative phage portal protein; FVD41_01745; phage(gi431810361)4.08e-46Showinfo_outline
26316389..316988PHAGE_Staphy_DW2_NC_024391: alanyl-tRNA synthetase; FVD41_01750; phage(gi658608071)3.77e-33Showinfo_outline
27317017..317835PHAGE_Deep_s_D6E_NC_019544: capsid protein; FVD41_01755; phage(gi423262332)1.58e-92Showinfo_outline
28318043..318360PHAGE_Clostr_phiCT9441A_NC_029022: head-tail connector; FVD41_01760; phage(gi971821686)3.49e-05Showinfo_outline
29318371..318709hypothetical protein; FVD41_017650.0Showinfo_outline
30318787..325665PHAGE_Bacill_SPbeta_NC_001884: putative transglycosylase; FVD41_01770; phage(gi9630157)0.0Showinfo_outline
31334181..334225attR0.0Showinfo_outline

Region 2, total 42 CDS

#CDS PositionBLAST HitE-ValueSequence
1386001..387137PHAGE_Bacill_phi105_NC_048631: hypothetical protein; FVD41_02135; phage(gi100028)2.74e-24Showinfo_outline
2387127..387261PhrA family phosphatase inhibitor; FVD41_021400.0Showinfo_outline
3387405..388358PHAGE_Bacill_vB_BanS_Tsamsa_NC_023007: hypothetical protein; FVD41_02145; phage(gi564292586)8.87e-80Showinfo_outline
4complement(388396..388773)PHAGE_Lactoc_ul36_NC_004066: hypothetical protein; FVD41_02150; phage(gi21716074)4.01e-20Showinfo_outline
5388883..389485PHAGE_Bacill_SP_10_NC_019487: phage-related replication protein; FVD41_02155; phage(gi418489651)1.58e-54Showinfo_outline
6complement(389628..390218)ImmA/IrrE family metallo-endopeptidase; FVD41_021600.0Showinfo_outline
7complement(390366..390704)PHAGE_Lactob_phig1e_NC_004305: repressor; FVD41_02165; phage(gi23455773)2.12e-18Showinfo_outline
8390895..391074hypothetical protein; FVD41_021700.0Showinfo_outline
9391064..391891PHAGE_Thermu_OH2_NC_021784: XkdB protein; FVD41_02175; phage(gi526118349)1.89e-27Showinfo_outline
10391791..392591PHAGE_Brevib_Osiris_NC_028969: putative DNA replication protein; FVD41_02180; phage(gi971761847)4.50e-72Showinfo_outline
11392856..393197phage portal protein; FVD41_021850.0Showinfo_outline
12393187..393390hypothetical protein; FVD41_021900.0Showinfo_outline
13393503..394012PHAGE_Brevib_Osiris_NC_028969: putative RNA polymerase sigma 24; FVD41_02195; phage(gi971761869)4.17e-29Showinfo_outline
14394127..394921PHAGE_Bacill_PM1_NC_020883: hypothetical protein; FVD41_02200; phage(gi472438297)1.72e-83Showinfo_outline
15394918..396216PHAGE_Anoxyb_A403_NC_048701: hypothetical protein; FVD41_02205; phage(gi100017)0.0Showinfo_outline
16396265..397656PHAGE_Bacill_vB_BtS_BMBtp14_NC_048640: minor tail protein; FVD41_02210; phage(gi100056)6.24e-171Showinfo_outline
17397676..398518PHAGE_Lactoc_98201_NC_031064: holin; FVD41_02215; phage(gi100034)4.97e-64Showinfo_outline
18398545..399480PHAGE_Rhizob_vB_RleS_L338C_NC_023502: capsid protein; FVD41_02220; phage(gi588498668)1.82e-65Showinfo_outline
19399497..399880PHAGE_Bacill_vB_BtS_B83_NC_048762: hypothetical protein; FVD41_02225; phage(gi100012)1.02e-17Showinfo_outline
20399877..400233DUF3599 family protein; FVD41_022300.0Showinfo_outline
21400230..400733PHAGE_Brevib_Osiris_NC_028969: hypothetical protein; FVD41_02235; phage(gi971761781)1.37e-09Showinfo_outline
22400730..401176phage portal protein; FVD41_022400.0Showinfo_outline
23401173..401382PHAGE_Bacill_BalMu_1_NC_030945: hypothetical protein; FVD41_02245; phage(gi100036)3.52e-05Showinfo_outline
24401382..402779PHAGE_Clostr_phiCT9441A_NC_029022: xkdK-like tail sheath protein; FVD41_02250; phage(gi971821693)7.64e-101Showinfo_outline
25402781..403224PHAGE_Brevib_Osiris_NC_028969: putative portal protein; FVD41_02255; phage(gi971761785)3.62e-35Showinfo_outline
26403299..403745PHAGE_Brevib_Osiris_NC_028969: hypothetical protein; FVD41_02260; phage(gi971761792)1.59e-13Showinfo_outline
27403787..403939hypothetical protein; FVD41_022650.0Showinfo_outline
28403927..409131PHAGE_Aeriba_AP45_NC_048651: minor tail protein; FVD41_02270; phage(gi100055)9.50e-45Showinfo_outline
29409124..409783PHAGE_Clostr_phiCT9441A_NC_029022: xkdP-like LysM domain-containing protein; FVD41_02275; phage(gi971821700)2.97e-34Showinfo_outline
30409797..410774PHAGE_Brevib_Osiris_NC_028969: putative late control D protein; FVD41_02280; phage(gi971761797)2.11e-33Showinfo_outline
31410774..411040PHAGE_Thermu_OH2_NC_021784: hypothetical protein; FVD41_02285; phage(gi526118317)1.55e-10Showinfo_outline
32411190..411615PHAGE_Brevib_Osiris_NC_028969: hypothetical protein; FVD41_02290; phage(gi971761799)1.56e-17Showinfo_outline
33411608..412654PHAGE_Brevib_Osiris_NC_028969: putative baseplate J family protein; FVD41_02295; phage(gi971761800)5.29e-64Showinfo_outline
34412638..413216PHAGE_Brevib_Osiris_NC_028969: putative phage-like element PBSX; FVD41_02300; phage(gi971761801)2.40e-12Showinfo_outline
35413213..413485hypothetical protein; FVD41_023050.0Showinfo_outline
36413488..415251PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_02310; phage(gi9630166)2.49e-24Showinfo_outline
37415263..415589phage portal protein; FVD41_023150.0Showinfo_outline
38415589..415753PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_02320; phage(gi9630164)4.22e-15Showinfo_outline
39415808..416605PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_02325; phage(gi9630167)5.14e-11Showinfo_outline
40416659..416922PHAGE_Bacill_SPP1_NC_004166: hypothetical protein; FVD41_02330; phage(gi111146924)2.26e-22Showinfo_outline
41416936..417199PHAGE_Bacill_Staley_NC_022767: holin; FVD41_02335; phage(gi568191187)1.94e-23Showinfo_outline
42417213..418091PHAGE_Aeriba_AP45_NC_048651: capsid maturation protease; FVD41_02340; phage(gi100067)4.54e-37Showinfo_outline

Region 3, total 175 CDS

#CDS PositionBLAST HitE-ValueSequence
1795782..795793attL0.0Showinfo_outline
2complement(795795..797411)PHAGE_Bacill_SPbeta_NC_001884: site-specific recombinase; FVD41_04280; phage(gi9630126)0.0Showinfo_outline
3complement(797767..798732)PHAGE_Bacill_SPbeta_NC_001884: putative DNase/RNase endonuclease; FVD41_04285; phage(gi9630131)2.54e-128Showinfo_outline
4798995..799429PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04290; phage(gi9630133)1.73e-06Showinfo_outline
5complement(799473..800243)hypothetical protein; FVD41_042950.0Showinfo_outline
6800753..802552PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04300; phage(gi9630134)0.0Showinfo_outline
7802567..803025SMI1/KNR4 family protein; FVD41_043050.0Showinfo_outline
8complement(803331..803420)putative holin-like toxin; FVD41_043100.0Showinfo_outline
9803663..803866hypothetical protein; FVD41_043150.0Showinfo_outline
10803993..804766sporulation protein YunB; FVD41_043200.0Showinfo_outline
11804985..805317PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04325; phage(gi9630141)3.21e-57Showinfo_outline
12805310..806560PHAGE_Bacill_SPbeta_NC_001884: IMPB/MUCB/SAMB family protein; FVD41_04330; phage(gi9630142)0.0Showinfo_outline
13complement(806594..806776)hypothetical protein; FVD41_043350.0Showinfo_outline
14complement(806766..807902)PHAGE_Bacill_phi105_NC_048631: hypothetical protein; FVD41_04340; phage(gi100028)5.08e-26Showinfo_outline
15complement(808045..808332)PHAGE_Pseudo_201phi2_1_NC_010821: virion structural protein; FVD41_04345; phage(gi189490385)7.60e-17Showinfo_outline
16complement(808688..808939)PHAGE_Staphy_P954_NC_013195: holin; FVD41_04350; phage(gi257136422)2.73e-32Showinfo_outline
17complement(808960..809352)hypothetical protein; FVD41_043550.0Showinfo_outline
18complement(809468..810514)PHAGE_Bacill_vB_BanS_Tsamsa_NC_023007: hypothetical protein; FVD41_04360; phage(gi564292586)4.78e-85Showinfo_outline
19complement(810688..813240)PHAGE_Bacill_phi105_NC_048631: hypothetical protein; FVD41_04365; phage(gi100019)0.0Showinfo_outline
20complement(813284..814099)PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04370; phage(gi9630154)5.42e-143Showinfo_outline
21complement(815245..817401)PHAGE_Bacill_SPbeta_NC_001884: YomG; FVD41_04375; phage(gi9630155)0.0Showinfo_outline
22complement(817414..818172)PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04380; phage(gi9630156)2.58e-160Showinfo_outline
23complement(818230..825330)PHAGE_Bacill_SPbeta_NC_001884: putative transglycosylase; FVD41_04385; phage(gi9630157)0.0Showinfo_outline
24complement(825377..826003)PHAGE_Bacill_SPbeta_NC_001884: immunity protein d; FVD41_04390; phage(gi9630158)5.10e-26Showinfo_outline
25complement(826075..826485)PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04395; phage(gi9630159)1.31e-29Showinfo_outline
26complement(826579..826761)hypothetical protein; FVD41_044000.0Showinfo_outline
27complement(826790..827842)PHAGE_Stx2_c_Stx2a_F451_NC_049924: hypothetical protein; FVD41_04405; phage(gi100029)3.04e-75Showinfo_outline
28complement(827839..828339)PHAGE_Stx2_c_Stx2a_F451_NC_049924: hypothetical protein; FVD41_04410; phage(gi100030)2.41e-10Showinfo_outline
29complement(828495..829472)PHAGE_Staphy_6ec_NC_024355: integrase; FVD41_04415; phage(gi658310369)3.62e-23Showinfo_outline
30complement(829486..829902)PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04420; phage(gi9630162)2.24e-64Showinfo_outline
31complement(829902..830387)PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04425; phage(gi9630163)2.80e-71Showinfo_outline
32complement(830470..830670)PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04430; phage(gi9630164)6.61e-16Showinfo_outline
33complement(830750..830989)PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04435; phage(gi9630165)1.18e-14Showinfo_outline
34complement(831004..832338)PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04440; phage(gi9630166)7.68e-82Showinfo_outline
35complement(832338..832694)PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04445; phage(gi9630167)4.86e-64Showinfo_outline
36complement(832766..833233)PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04450; phage(gi9630169)3.11e-07Showinfo_outline
37complement(833249..834052)PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04455; phage(gi9630170)3.84e-161Showinfo_outline
38complement(834093..834803)PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04460; phage(gi9630171)4.48e-117Showinfo_outline
39complement(834800..835306)PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04465; phage(gi9630172)1.51e-85Showinfo_outline
40complement(835303..835968)PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04470; phage(gi9630173)1.32e-59Showinfo_outline
41complement(835978..836364)hypothetical protein; FVD41_044750.0Showinfo_outline
42complement(836377..836847)hypothetical protein; FVD41_044800.0Showinfo_outline
43complement(836902..838008)PHAGE_Geobac_E3_NC_029073: hypothetical protein; FVD41_04485; phage(gi985758353)2.27e-15Showinfo_outline
44complement(838033..838497)hypothetical protein; FVD41_044900.0Showinfo_outline
45complement(838538..839692)hypothetical protein; FVD41_044950.0Showinfo_outline
46complement(839710..841251)PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04500; phage(gi9630180)1.80e-20Showinfo_outline
47complement(841270..844335)PHAGE_Brevib_Sundance_NC_028749: putative protein YonF; FVD41_04505; phage(gi971482569)2.14e-57Showinfo_outline
48complement(844335..845342)PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04510; phage(gi9630182)4.69e-08Showinfo_outline
49complement(845451..845951)PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04515; phage(gi9630183)1.79e-23Showinfo_outline
50complement(846352..847569)PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04520; phage(gi9630185)0.0Showinfo_outline
51complement(847581..847790)hypothetical protein; FVD41_045250.0Showinfo_outline
52complement(848059..848259)hypothetical protein; FVD41_045300.0Showinfo_outline
53complement(848668..848782)hypothetical protein; FVD41_045350.0Showinfo_outline
54complement(849361..849636)PHAGE_Bacill_SPbeta_NC_001884: histone-like prokaryotic DNA-binding protein family; FVD41_04540; phage(gi9630187)2.18e-38Showinfo_outline
55complement(849890..850525)PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04545; phage(gi9630188)1.38e-100Showinfo_outline
56complement(850872..852728)PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04550; phage(gi9630188)0.0Showinfo_outline
57complement(852790..852969)PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04555; phage(gi9630189)1.67e-16Showinfo_outline
58complement(853089..853325)PHAGE_Bacill_BM5_NC_029069: hypothetical protein; FVD41_04560; phage(gi985757802)5.97e-06Showinfo_outline
59853504..853788PHAGE_Bacill_G_NC_023719: gp137; FVD41_04565; phage(gi593777596)3.38e-06Showinfo_outline
60853788..854900PHAGE_Bacill_G_NC_023719: gp138; FVD41_04570; phage(gi593777597)5.30e-37Showinfo_outline
61855891..856070PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04575; phage(gi9630192)9.95e-11Showinfo_outline
62856119..856337hypothetical protein; FVD41_045800.0Showinfo_outline
63856374..856613hypothetical protein; FVD41_045850.0Showinfo_outline
64856694..857911PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04590; phage(gi9630194)8.09e-147Showinfo_outline
65858227..859843PHAGE_Geobac_E3_NC_029073: hypothetical protein; FVD41_04595; phage(gi985758513)6.91e-12Showinfo_outline
66859860..860726PHAGE_Bacill_IEBH_NC_011167: hypothetical protein; FVD41_04600; phage(gi197261597)2.04e-53Showinfo_outline
67861138..861332hypothetical protein; FVD41_046050.0Showinfo_outline
68861637..862140hypothetical protein; FVD41_046100.0Showinfo_outline
69862201..862701hypothetical protein; FVD41_046150.0Showinfo_outline
70862759..863133PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04620; phage(gi9630199)1.13e-07Showinfo_outline
71complement(863208..864299)acyltransferase; FVD41_046250.0Showinfo_outline
72864605..865042hypothetical protein; FVD41_046300.0Showinfo_outline
73865136..865339PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04635; phage(gi9630197)3.56e-30Showinfo_outline
74865456..865647hypothetical protein; FVD41_046400.0Showinfo_outline
75865679..866056hypothetical protein; FVD41_046450.0Showinfo_outline
76866095..866331hypothetical protein; FVD41_046500.0Showinfo_outline
77866341..866763hypothetical protein; FVD41_046550.0Showinfo_outline
78867055..868014DUF4062 domain-containing protein; FVD41_046600.0Showinfo_outline
79868015..868434PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04665; phage(gi9630199)9.54e-56Showinfo_outline
80complement(868457..868687)hypothetical protein; FVD41_046700.0Showinfo_outline
81868852..869772hypothetical protein; FVD41_046750.0Showinfo_outline
82complement(869786..869968)hypothetical protein; FVD41_046800.0Showinfo_outline
83870039..870290PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04685; phage(gi9630200)8.47e-31Showinfo_outline
84870293..870508PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04690; phage(gi9630201)1.43e-20Showinfo_outline
85870520..870651PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04695; phage(gi9630202)1.51e-19Showinfo_outline
86870892..871224HIT domain-containing protein; FVD41_047000.0Showinfo_outline
87871273..871974hypothetical protein; FVD41_047050.0Showinfo_outline
88871994..872569PHAGE_Cronob_02_NC_028672: putative HNH endonuclease; FVD41_04710; phage(gi966203620)2.36e-10Showinfo_outline
89872742..873881PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04715; phage(gi9630206)6.73e-86Showinfo_outline
90873911..874042lysogeny pheromone AimP family peptide; FVD41_047200.0Showinfo_outline
91874474..874686hypothetical protein; FVD41_047250.0Showinfo_outline
92874701..874931hypothetical protein; FVD41_047300.0Showinfo_outline
93875144..876202PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04735; phage(gi9630211)6.54e-46Showinfo_outline
94876279..877628PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04740; phage(gi9630212)1.28e-90Showinfo_outline
95877649..878632PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04745; phage(gi9630213)8.42e-35Showinfo_outline
96complement(878853..879074)PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04750; phage(gi9630214)6.45e-20Showinfo_outline
97879240..879539hypothetical protein; FVD41_047550.0Showinfo_outline
98879614..879859hypothetical protein; FVD41_047600.0Showinfo_outline
99880306..880506PHAGE_Bacill_PM1_NC_020883: hypothetical protein; FVD41_04765; phage(gi472438252)5.71e-34Showinfo_outline
100880503..880880PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04770; phage(gi9630219)5.81e-22Showinfo_outline
101880880..881089PHAGE_Bacill_Pascal_NC_027372: hypothetical protein; FVD41_04775; phage(gi100035)8.60e-10Showinfo_outline
102881086..881421PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04780; phage(gi9630223)7.39e-67Showinfo_outline
103881490..882287PHAGE_Bacill_BM5_NC_029069: hypothetical protein; FVD41_04785; phage(gi985757886)3.76e-80Showinfo_outline
104882321..882506hypothetical protein; FVD41_047900.0Showinfo_outline
105882512..882769PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04795; phage(gi9630228)1.74e-46Showinfo_outline
106882792..882956PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04800; phage(gi9630226)3.31e-28Showinfo_outline
107882965..883168PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04805; phage(gi9630227)1.88e-42Showinfo_outline
108complement(883587..883784)hypothetical protein; FVD41_048100.0Showinfo_outline
109883884..884120hypothetical protein; FVD41_048150.0Showinfo_outline
110884157..884828PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04820; phage(gi9630231)7.85e-116Showinfo_outline
111884847..885464hypothetical protein; FVD41_048250.0Showinfo_outline
112885539..885739PHAGE_Bacill_Bp8p_T_NC_047744: capsid maturation protease; FVD41_04830; phage(gi100067)2.21e-13Showinfo_outline
113885771..885953hypothetical protein; FVD41_048350.0Showinfo_outline
114886127..886342PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04840; phage(gi9630235)4.36e-40Showinfo_outline
115complement(886356..886730)PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04845; phage(gi9630236)2.60e-53Showinfo_outline
116886852..887313PHAGE_Bacill_250_NC_029024: deoxyuridine 5'-triphosphate nucleotidohydrolase; FVD41_04850; phage(gi971766646)1.04e-46Showinfo_outline
117887606..888367hypothetical protein; FVD41_048550.0Showinfo_outline
118888399..888806PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04860; phage(gi9630241)7.16e-84Showinfo_outline
119complement(888880..889692)PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04865; phage(gi9630242)6.43e-177Showinfo_outline
120complement(889762..890436)PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04870; phage(gi9630243)4.95e-161Showinfo_outline
121890507..890752PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04875; phage(gi9630244)2.78e-34Showinfo_outline
122890778..891029PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04880; phage(gi9630220)1.99e-09Showinfo_outline
123891045..891521PHAGE_Clostr_phiCT19406C_NC_029006: YopX-like protein; FVD41_04885; phage(gi971821533)7.71e-14Showinfo_outline
124891596..891814hypothetical protein; FVD41_048900.0Showinfo_outline
125891919..892740PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04895; phage(gi9630246)2.53e-119Showinfo_outline
126892737..894485PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04900; phage(gi9630247)0.0Showinfo_outline
127894524..894901PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04905; phage(gi9630249)8.64e-68Showinfo_outline
128895093..895479hypothetical protein; FVD41_049100.0Showinfo_outline
129895997..896926PHAGE_Bacill_PBS1_NC_043027: putative transcriptional regulator; FVD41_04915; phage(gi100045)2.67e-27Showinfo_outline
130896947..898188PHAGE_Clostr_c_st_NC_007581: conserved hypothetical phage-related protein; FVD41_04920; phage(gi80159741)6.90e-05Showinfo_outline
131898244..899359PHAGE_Brevib_Sundance_NC_028749: putative nucleotide-binding protein; FVD41_04925; phage(gi971482702)2.73e-12Showinfo_outline
132899408..899959hypothetical protein; FVD41_049300.0Showinfo_outline
133899956..901437PHAGE_Lactoc_phiL47_NC_023574: putative replicative DNA helicase; FVD41_04935; phage(gi589890834)1.61e-44Showinfo_outline
134901459..902475PHAGE_Clostr_c_st_NC_007581: putative DNA primase; FVD41_04940; phage(gi80159745)7.78e-33Showinfo_outline
135902491..903558PHAGE_Clostr_c_st_NC_007581: hypothetical protein; FVD41_04945; phage(gi80159746)4.33e-33Showinfo_outline
136903568..905289PHAGE_Entero_IME_EFm1_NC_024356: DNA polymerase; FVD41_04950; phage(gi658310484)2.00e-88Showinfo_outline
137904433..904444attR0.0Showinfo_outline
138905352..906011PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04955; phage(gi9630259)7.74e-29Showinfo_outline
139906023..906226PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04960; phage(gi9630262)9.22e-34Showinfo_outline
140906386..906913PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04965; phage(gi9630264)8.27e-95Showinfo_outline
141906891..907409PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04970; phage(gi9630265)2.89e-115Showinfo_outline
142complement(907471..907818)hypothetical protein; FVD41_049750.0Showinfo_outline
143907943..908779PHAGE_Cellul_phi18:3_NC_021794: DNA methylase; FVD41_04980; phage(gi526177372)8.90e-55Showinfo_outline
144908846..910339PHAGE_Bacill_SPbeta_NC_001884: modification methylase; FVD41_04985; phage(gi9630267)8.83e-180Showinfo_outline
145910390..910608PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04990; phage(gi9630268)5.95e-23Showinfo_outline
146910646..910873PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_04995; phage(gi9630270)8.24e-31Showinfo_outline
147911370..911549hypothetical protein; FVD41_050000.0Showinfo_outline
148911688..912083PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_05005; phage(gi9630276)2.42e-83Showinfo_outline
149912098..912445PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_05010; phage(gi9630277)1.46e-72Showinfo_outline
150912714..913037hypothetical protein; FVD41_050150.0Showinfo_outline
151913142..913360hypothetical protein; FVD41_050200.0Showinfo_outline
152913326..913622PHAGE_Bacill_PM1_NC_020883: hypothetical protein; FVD41_05025; phage(gi472438288)8.58e-17Showinfo_outline
153913636..913908PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_05030; phage(gi9630280)9.26e-12Showinfo_outline
154913972..914328PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_05035; phage(gi9630284)3.70e-80Showinfo_outline
155914325..914720PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_05040; phage(gi9630285)1.60e-86Showinfo_outline
156914647..915405PHAGE_Bacill_SPbeta_NC_001884: ribunucleotide reductase large subunit; FVD41_05045; phage(gi9630286)1.08e-166Showinfo_outline
157915651..916076PHAGE_Bacill_SPbeta_NC_001884: ribunucleotide reductase large subunit; FVD41_05050; phage(gi9630286)5.55e-90Showinfo_outline
158916357..917313PHAGE_Bacill_SPbeta_NC_001884: ribunucleotide reductase large subunit; FVD41_05055; phage(gi9630286)0.0Showinfo_outline
159917544..918128PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_05060; phage(gi9630287)8.80e-136Showinfo_outline
160918236..918757PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_05065; phage(gi9630288)8.42e-121Showinfo_outline
161918934..919323PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_05070; phage(gi9630287)7.88e-82Showinfo_outline
162919316..920035PHAGE_Bacill_DIGNKC_NC_031006: capsid maturation protease; FVD41_05075; phage(gi100067)1.33e-39Showinfo_outline
163920036..920278PHAGE_Bacill_SPbeta_NC_001884: thioredoxin; FVD41_05080; phage(gi9630289)7.62e-37Showinfo_outline
164920563..920991PHAGE_Bacill_SPbeta_NC_001884: putative dUTPase; FVD41_05085; phage(gi9630290)5.15e-97Showinfo_outline
165921395..921694PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_05090; phage(gi9630293)6.08e-26Showinfo_outline
166922063..922455PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_05095; phage(gi9630294)4.44e-33Showinfo_outline
167922470..923309PHAGE_Bacill_G_NC_023719: gp124; FVD41_05100; phage(gi593777583)4.68e-122Showinfo_outline
168923309..923815PHAGE_Geobac_E3_NC_029073: putative dihydrofolate reductase; FVD41_05105; phage(gi985758403)5.11e-41Showinfo_outline
169923943..924308PHAGE_Staphy_SPbeta_like_NC_029119: hypothetical protein; FVD41_05110; phage(gi985761192)2.12e-06Showinfo_outline
170924368..924724hypothetical protein; FVD41_051150.0Showinfo_outline
171924712..925461PHAGE_Bacill_SIOphi_NC_042133: hypothetical protein; FVD41_05120; phage(gi100065)3.28e-51Showinfo_outline
172925458..925664hypothetical protein; FVD41_051250.0Showinfo_outline
173925683..925862hypothetical protein; FVD41_051300.0Showinfo_outline
174complement(926103..926342)PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_05135; phage(gi9630308)1.88e-31Showinfo_outline
175926440..926991PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_05140; phage(gi9630309)7.77e-119Showinfo_outline

Region 4, total 51 CDS

#CDS PositionBLAST HitE-ValueSequence
11058506..1058518attL0.0Showinfo_outline
2complement(1058538..1059695)PHAGE_Bacill_phi4B1_NC_028886: site-specific recombinase; FVD41_05500; phage(gi971821285)1.66e-75Showinfo_outline
3complement(1059732..1060799)PHAGE_Staphy_phiETA2_NC_008798: ribosomal protein; FVD41_05505; phage(gi122891719)7.24e-10Showinfo_outline
4complement(1060780..1061172)PHAGE_Paenib_Vegas_NC_028767: helix-turn-helix family domain XRE family transcriptional regulator; FVD41_05510; phage(gi971741618)3.95e-17Showinfo_outline
51061302..1061520PHAGE_Paenib_Vegas_NC_028767: helix-turn-helix family domain XRE family transcriptional regulator; FVD41_05515; phage(gi971741619)1.49e-26Showinfo_outline
61061635..1062399PHAGE_Paenib_Eltigre_NC_048717: holin; FVD41_05520; phage(gi100034)2.47e-52Showinfo_outline
71062414..1062716PHAGE_Strept_P9_NC_009819: hypothetical protein; FVD41_05525; phage(gi157311142)1.10e-07Showinfo_outline
81062789..1062977PHAGE_Bacill_phi105_NC_004167: hypothetical protein; FVD41_05530; phage(gi22855029)1.04e-14Showinfo_outline
9complement(1063248..1063463)PHAGE_Erysip_SE_1_NC_029078: hypothetical protein; FVD41_05535; phage(gi985758873)1.24e-14Showinfo_outline
101063536..1063931hypothetical protein; FVD41_055400.0Showinfo_outline
111063928..1065106PHAGE_Clostr_phiCT453A_NC_028991: hypothetical protein; FVD41_05545; phage(gi100016)2.12e-146Showinfo_outline
121065137..1065706PHAGE_Clostr_phiCT453A_NC_028991: hypothetical protein; FVD41_05550; phage(gi100017)1.50e-84Showinfo_outline
131065766..1066317PHAGE_Bacill_vB_BtS_BMBtp14_NC_048640: hypothetical protein; FVD41_05555; phage(gi100031)3.07e-26Showinfo_outline
141066314..1068260PHAGE_Clostr_phiCT453A_NC_028991: hypothetical protein; FVD41_05560; phage(gi100018)0.0Showinfo_outline
151068379..1068582PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; FVD41_05565; phage(gi9630226)7.56e-21Showinfo_outline
161068606..1071017PHAGE_Clostr_phiCT453A_NC_028991: hypothetical protein; FVD41_05570; phage(gi100019)0.0Showinfo_outline
171071326..1071640PHAGE_Coryne_StAB_NC_048780: recombination protein; FVD41_05575; phage(gi100049)3.54e-25Showinfo_outline
181071600..1072955PHAGE_Entero_phiFL4A_NC_013644: DNA helicase; FVD41_05580; phage(gi281416462)0.0Showinfo_outline
191072952..1073332PHAGE_Bacill_phi105_NC_004167: hypothetical protein; FVD41_05585; phage(gi22855040)4.66e-61Showinfo_outline
201073706..1074160PHAGE_Bacill_WBeta_NC_007734: hypothetical protein; FVD41_05590; phage(gi85701427)2.51e-05Showinfo_outline
211074150..1074506HNH endonuclease; FVD41_055950.0Showinfo_outline
221074543..1075151hypothetical protein; FVD41_056000.0Showinfo_outline
231075397..1075891PHAGE_Staphy_AJ_2017_NC_048644: hypothetical protein; FVD41_05605; phage(gi100029)1.04e-20Showinfo_outline
241075884..1077590PHAGE_Staphy_PVL_NC_002321: hypothetical protein; FVD41_05610; phage(gi9635167)2.83e-137Showinfo_outline
251077607..1077813PHAGE_Lactob_T25_NC_048625: hypothetical protein; FVD41_05615; phage(gi100004)9.66e-05Showinfo_outline
261077818..1079044PHAGE_Staphy_phiRS7_NC_022914: portal protein; FVD41_05620; phage(gi560185961)1.81e-80Showinfo_outline
271079037..1079633PHAGE_Staphy_tp310_1_NC_009761: putative prohead protease; FVD41_05625; phage(gi156603926)5.09e-63Showinfo_outline
281079682..1080881PHAGE_Lactob_LF1_NC_019486: phage capsid protein; FVD41_05630; phage(gi418489389)2.62e-99Showinfo_outline
291080909..1081376PHAGE_Bacill_phi105_NC_004167: hypothetical protein; FVD41_05635; phage(gi22855002)8.82e-52Showinfo_outline
301081428..1081721PHAGE_Entero_EFAP_1_NC_012419: head-tail joining protein; FVD41_05640; phage(gi225626391)8.01e-17Showinfo_outline
311081711..1082037PHAGE_Entero_IME_EFm1_NC_024356: head-tail adaptor protein; FVD41_05645; phage(gi658310467)2.46e-09Showinfo_outline
321082037..1082426PHAGE_Entero_AUEF3_NC_042134: capsid decoration protein; FVD41_05650; phage(gi100066)7.24e-16Showinfo_outline
331082423..1082812PHAGE_Entero_AUEF3_NC_042134: capsid maturation protease; FVD41_05655; phage(gi100067)2.53e-06Showinfo_outline
341082831..1083409PHAGE_Lactob_Lrm1_NC_011104: major tail protein; FVD41_05660; phage(gi195661211)2.54e-37Showinfo_outline
351083467..1083829PHAGE_Staphy_StB20_NC_019915: hypothetical protein; FVD41_05665; phage(gi431809776)1.00e-05Showinfo_outline
361083841..1084023hypothetical protein; FVD41_056700.0Showinfo_outline
371084084..1087830PHAGE_Aeriba_AP45_NC_048651: minor tail protein; FVD41_05675; phage(gi100055)7.50e-151Showinfo_outline
381087831..1088667PHAGE_Bacill_phi105_NC_004167: hypothetical protein; FVD41_05680; phage(gi22855011)9.01e-114Showinfo_outline
391088680..1090398PHAGE_Bacill_phi105_NC_004167: hypothetical protein; FVD41_05685; phage(gi22855012)4.79e-133Showinfo_outline
401090431..1092995PHAGE_Bacill_phi105_NC_004167: hypothetical protein; FVD41_05690; phage(gi22855014)0.0Showinfo_outline
411093008..1094144PHAGE_Bacill_phi105_NC_004167: hypothetical protein; FVD41_05695; phage(gi22855015)0.0Showinfo_outline
421094141..1094503PHAGE_Bacill_phi105_NC_004167: hypothetical protein; FVD41_05700; phage(gi22855016)2.16e-75Showinfo_outline
431094500..1094688PHAGE_Bacill_phi105_NC_004167: hypothetical protein; FVD41_05705; phage(gi22855017)4.00e-39Showinfo_outline
441094739..1095161PHAGE_Bacill_phi105_NC_004167: hypothetical protein; FVD41_05710; phage(gi22855018)2.14e-83Showinfo_outline
451095209..1096180PHAGE_Bacill_vB_BanS_Tsamsa_NC_023007: hypothetical protein; FVD41_05715; phage(gi564292586)4.88e-79Showinfo_outline
46complement(1096196..1097281)DUF4917 family protein; FVD41_057200.0Showinfo_outline
471097601..1097613attR0.0Showinfo_outline
481097671..1097682attL0.0Showinfo_outline
49complement(1097920..1098064)PHAGE_Bacill_PfEFR_5_NC_031055: hypothetical protein; FVD41_05725; phage(gi100031)1.33e-07Showinfo_outline
501098155..1098513PHAGE_Bacill_phi105_NC_004167: hypothetical protein; FVD41_05730; phage(gi22855040)8.47e-19Showinfo_outline
511103471..1103482attR0.0Showinfo_outline

Region 5, total 13 CDS

#CDS PositionBLAST HitE-ValueSequence
11130621..1130634attL0.0Showinfo_outline
2complement(1133150..1135567)PHAGE_Bacill_phi105_NC_048631: hypothetical protein; FVD41_05905; phage(gi100019)0.0Showinfo_outline
31135855..1136094PHAGE_Bacill_PM1_NC_020883: hypothetical protein; FVD41_05910; phage(gi472438254)6.96e-27Showinfo_outline
41136265..1136699PHAGE_Weisse_WCP30_NC_031101: hypothetical protein; FVD41_05915; phage(gi100016)1.55e-33Showinfo_outline
5complement(1136750..1136935)DUF4177 domain-containing protein; FVD41_059200.0Showinfo_outline
61137141..1137962PHAGE_Bacill_vB_BmeM_Goe8_NC_048797: hypothetical protein; FVD41_05925; phage(gi100024)2.96e-38Showinfo_outline
71138205..1139035PHAGE_Bacill_PBS1_NC_043027: terminase large subunit; FVD41_05930; phage(gi100070)2.73e-150Showinfo_outline
8complement(1139063..1139512)DUF2512 family protein; FVD41_059350.0Showinfo_outline
91139669..1140097hypothetical protein; FVD41_059400.0Showinfo_outline
10complement(1140446..1141066)PHAGE_Faecal_FP_Lugh_NC_047912: hypothetical protein; FVD41_05945; phage(gi100003)9.41e-16Showinfo_outline
111141168..1141181attR0.0Showinfo_outline
121141223..1141534PHAGE_Bacill_AR9_NC_031039: recombination protein; FVD41_05950; phage(gi100049)2.70e-07Showinfo_outline
131141550..1142200PHAGE_Anoxyb_A403_NC_048701: tail length tape-measure protein; FVD41_05955; phage(gi100057)9.96e-08Showinfo_outline
Click on a region to see details.
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)

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Length: 1268615 bps
Phages: 5
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Lysis
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Fiber Protein
Plate Protein
tRNA

Download data as .txt file: png_input file_download